Akurasu - User contributions [en]

Super Robot Wars/Z2.2/Flow Chart

2024-11-02T01:44:48Z

KomodoWork: /* Stages 32 - 40 */ Both combo attacks for Daitarn, Trider and Zambot are unlock at the same stage (38). The "3-3-7 Beat" even has a special dialogue pre-battle

Those in Black join your team. 
Those in Orange are available for that stage, then leave. 
Those in Blue have special requirements. Check the [[../Secrets|Secrets]] page for more details. 
Those in Red previously joined, but from this point, are rendered unusable. Those lost permanently are marked so, while others rejoin later on. 
Those in Green are upgrades for units already in your party.

==Prologue - Stage 20==
{| width="100%"
|-
| colspan="4" class="fc-prologue" |'''第１話：ブラックリベリオン Prologue Scenario 1: Black Rebellion'''

|-
| colspan="4" |'''Victory Condition:''' Defeat Cornelia's Gloucester, or survive for 4 turns. '''Defeat Condition:''' Zero or Kallen are defeated. '''Secret Requirements:'''
*Zero Points:
**Shoot down Cornelia with Zero. (+1)
'''Unit Acquisition:'''
*Gawain (Zero, C.C.)
*Guren Mk.II (Kallen)
*Gekka (Tohdoh)
*Burai (Tamaki)

|-
| colspan="4" class="fc-prologue" |'''第２話：ガンダム殲滅指令 Prologue Scenario 2: Gundam Destruction Order'''

|-
| colspan="4" |'''Victory Condition:''' '''Part 1:''' Defeat all enemies, or survive for 4 turns. '''Part 2:''' Defeat all enemies, or survive for 4 turns. '''Defeat Condition:''' '''Part 1:''' Setsuna is defeated. '''Part 2:''' Heero is defeated. '''Secret Requirements:''' '''Unit Acquisition:''' 
'''First Half:'''
*Gundam Exia (Setsuna)
*Gundam Kyrios (Allelujah)
*Gundam Nadleeh (Tieria)
'''Second Half:'''
*Wing Gundam (Heero)
*Gundam Deathscythe (Duo)
*Gundam Heavyarms (Trowa)
*Gundam Sandrock (Quatre)
*Shenlong Gundam (Wufei)

|-
| colspan="4" class="fc-prologue" |'''第3話：世界最後の日 Prologue Scenario 3: The Last Day of the Earth'''

|-
| colspan="4" |'''Victory Condition:''' Defeat all enemies. Defeat Shin Dragon, or survive for 4 turns. '''Defeat Condition:''' Dai-Gurren or Shin Getter is defeated. '''Secret Requirements:''' '''Unit Acquisition:'''
*Dai-Gurren (Dayakka, Leeron, Nia)
*Gurren Lagann (Simon, Rossiu)
*Shin Getter (Ryoma, Hayato, Musashi)
*Yoko M Tank (Yoko)
*King Kittan (Kittan)

|-
| colspan="4" class="fc-std-sc" |'''第１話：ファイティング・ガール Scenario 1: Fighting Girl'''

|-
| colspan="4" |'''Victory Condition:''' Defeat all enemies. '''Defeat Condition:''' Any ally is defeated '''SR Point:''' Defeat the second Dimensional Beast while Brasta Es has full HP. '''Secret Requirements:''' '''Unit Acquisition:'''
*Brasta Es (Esther)
*Gundam Deathscythe (Duo)
*Gundam Sandrock (Quatre)

|-
| colspan="4" class="fc-std-sc" |'''第２話：逃亡者 Scenario 2: Escapee'''

|-
| colspan="4" |'''Victory Condition:''' Defeat all enemies. '''Defeat Condition:''' Any ally is defeated '''SR Point:''' Destroy the Genocidron (Retreats at 6000 HP). '''Secret Requirements:''' '''Unit Acquisition:'''
*Guren Mk.II A-1 Arm Equipment (Kallen)
*Burai (C.C.)

|-
| colspan="4" class="fc-std-sc" |'''第3話：太陽の使者・鉄人28号 Scenario 3: Messenger of the Sun, Tetsujin 28'''

|-
| colspan="4" |'''Victory Condition:''' Defeat all enemies. '''Defeat Condition:''' Any ally is defeated '''SR Point:''' Within 5 turns, defeat all enemies, saving the Branch Robo #1 piloted by Branch for last (it retreats when below 5000 HP). '''Secret Requirements:'''
*Danube α1 (1/3)
**Choose the See Kallen Off and Crusher Squad routes.
*Zero Points:
**Up to 2 Zero Points are exclusive to the Go With Kallen and Kummen routes.
**On a first playthrough, if the See Kallen Off route is chosen, you must earn '''all''' remaining Zero Points to complete this secret.
'''Unit Acquisition:'''
*Tetsujin 28 (Shotaro)
*VF-25F Messiah (Alto)
*RVF-25 Messiah (Luca)
*VF-27y Lucifer (Brera)

|- class="fc-route-h"
| colspan="2" width="50%" |'''「カレン達を見送る」 See Kallen Off'''
| colspan="2" width="50%" |'''「カレン達と一緒に行く」 Go With Kallen'''

|- class="fc-route-h"
| width="25%" |'''「地球でクラッシャー隊に参加する」 Join the Crusher Squad on Earth''' Tetsujin 28 ''Recruit:'' Zambot 3 Trider G-7 Dai-Guard Gundam X Overman King Gainer Shin Mazinger Z
| width="25%" |'''「宇宙でS.M.S.に参加する」 Join the S.M.S. in space''' Macross Frontier ''Recruit:'' Aquarion Godmars Baldios
| width="25%" |'''「ガンダムと中東へ行く」 Go with the Gundams to the Middle East''' Gundam Wing ''Recruit:'' Gundam 00 Zeta Gundam Gundam Seed Destiny
| width="25%" |'''「黒の騎士団とクメンヘ行く」 Go with the Order of the Black Knights to Kummen''' Code Geass ''Recruit:'' VOTOMS

|-
| class="fc-route1" |'''第４話：竹尾ゼネラルカンパニー奮戦記 Scenario 4: Embattled Takeo General Company'''
| class="fc-route5" |'''第４話：セカンド・カミング Scenario 4: Second Coming'''
| class="fc-route6" |'''第４話：迷える戦士達 Scenario 4: Bewildered Soldiers'''
| class="fc-route2" |'''第４話：アッセンブルEX-10 Scenario 4: Assemble EX-10'''

|-
|'''Victory Condition:''' Defeat all enemies. '''Defeat Condition:''' All allies are defeated. '''SR Point:''' Clear the stage within 5 turns; Watta, Kappei, Shotaro, Kakikouji and Esther must each shoot down 2 enemies. '''Secret Requirements:''' '''Unit Acquisition:'''
*Zambot 3 (Kappei, Uchuta, Keiko)
*Trider G7 (Watta)
**Zambot 3 and Trider G7's ammo-based attacks have only 2 ammo each in this map
*Shuttle (Kakikouji, Atsui, Tohachiro, Ikue)
*Gundam DX (Garrod)
*King Gainer (Gainer)
*Panther (Sara, Adette)

|'''Victory Condition:''' Defeat all enemies. '''Defeat Condition:''' Any ally is defeated. Mothership is defeated. '''SR Point:''' Alto, Luca and Esther must each shoot down 2 enemies, and all initial enemies must be defeated within 3 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Macross Quarter (Jeffrey, Bobby, Cathy)
*VF-25S Messiah (Ozma)
*VF-25G Messiah (Mikhail)
*Solar, Mars and Lunar Aquarion (Apollo, Pierre, Reika)
**Silvia, Sirius, Jun and Tsugumi become available subpilots after the stage
*Queadluun-Rhea (Klan)
*VB-6 Koenig Monster (Canaria)

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Heero or Trowa are defeated. Setsuna is defeated '''SR Point:''' Defeat Barrack Zinin's Ahead (Retreats when below 6000 HP). '''Secret Requirements:''' '''Unit Acquisition:'''
*Gundam Heavyarms (Trowa)
*Leo (Heero)
*Gundam Exia Repair (Setsuna)

|'''Victory Condition:''' Defeat all enemies. '''Defeat Condition:''' All allies are defeated. '''SR Point:''' Clear the stage within 4 player turns; each ally must score at least two kills. '''Secret Requirements:''' '''Unit Acquisition:'''
*Marshdog (Chirico)
*Diving Beetle (Kan Yu)
*Diving Beetle (Potaria)
*Diving Beetle (Kiderra)
*Berserga (Ru Shako)

|-
| class="fc-route1" |'''第５話：- 広報2課の憂鬱 Scenario 5: The Melancholy of Public Relations Division 2'''
| class="fc-route5" |'''第５話：トゥインクル・スタ Scenario 5: Twinkle Star'''
| class="fc-route6" |'''第５話： OZとアロウズ Scenario 5: OZ and A-laws'''
| class="fc-route2" |'''第５話：渦中 Scenario 5: Maelstrom'''

|-
|'''Victory Condition:''' Defeat all enemies. '''Defeat Condition:''' Akagi is defeated. '''SR Point:''' Defeat both of the DM Beast Bull Damon (Special Type) simultaneously. Using a Support Attack or MAP Attack to defeat them counts as one attack. '''Secret Requirements:''' '''Unit Acquisition:'''
*Dai Guard (Akagi, Ibuki, Aoyama)
*Dai Guard gains the "Dai Guard MAX" attack

|'''Victory Condition:''' Defeat all enemies. '''Defeat Condition:''' Setsuna is defeated. '''SR Point:''' Clear the stage by Turn 4. '''Secret Requirements:''' '''Unit Acquisition:'''
*Gundam Exia Repair (Setsuna)

|'''Victory Condition:''' Have Wufei reach the designated points within five turns. '''Defeat Condition:''' Wufei is defeated, or 5 turns pass. '''SR Point:''' Defeat all enemies, then fulfill the Victory Condition. '''Secret Requirements:''' '''Unit Acquisition:'''
*Shenlong Gundam (Wufei)

|'''Victory Condition:''' Defeat all enemies. Defeat the Blue Snapping Turtle or force it to retreat. '''Defeat Condition:''' Any ally is defeated. Chirico or Potaria is defeated. '''SR Point:''' Defeat the Blue Snapping Turtle (Retreats when below 5000 HP). '''Secret Requirements:''' '''Unit Acquisition:'''

|-
| class="fc-route1" |'''第6話：登場！　ドイツの鬼伯爵！ Scenario 6: Enter! The Diabolic German Count!'''
| class="fc-route5" |'''第6話：忍び寄る脅威 Scenario 6: Creeping Threat'''
| class="fc-route6" |'''第6話：彷徨う天使達 Scenario 6: Wandering Angels'''
| class="fc-route2" |'''第6話：介入 Scenario 6: Intervention'''

|-
|'''Victory Condition:''' Defeat all enemies. '''Defeat Condition:''' All allies are defeated. Setsuna is defeated. '''SR Point:''' Defeat all initial enemies within 4 turns (on Hard difficulty, 3 turns). '''Secret Requirements:''' '''Unit Acquisition:'''
*Mazinger Z (Koji)
*Venus A (Sayaka)
*Gundam Exia Repair (Setsuna)

|'''Victory Condition:''' Defeat all enemies. '''Defeat Condition:''' Mothership is defeated. '''SR Point:''' Defeat Guldar (Geru). (Retreats when below 8000 HP) '''Secret Requirements:''' '''Unit Acquisition:'''
*Gaia / God Mars (Takeru)
*Cosmo Crusher (Kenji, Naoto, Akira, Mika)
*All Valkyrie units gain the Special Pack parts

|'''Victory Condition:''' Defeat the Ahead. All three Katharon Tieren reach the designated point. '''Defeat Condition:''' All allies are defeated. Any Katharon Tieren is defeated. '''SR Point:''' Defeat all GN-XIIIs, then defeat the Ahead before the last Katharon Tieren reaches the designated points. (You have 5 Turns) '''Secret Requirements:''' '''Unit Acquisition:'''
*Seravee Gundam (Tieria)

|'''Victory Condition:''' Blue Snapping Turtle (Ypsilon) is defeated. Defeat all enemies. '''Defeat Condition:''' Chirico, Kan Yu or Kallen is defeated. Setsuna is defeated. '''SR Point:''' Within 4 turns, defeat all other enemies before defeating the Blue Snapping Turtle. '''Secret Requirements:''' '''Unit Acquisition:'''
*Gundam Exia Repair (Setsuna)
*Diving Beetle (Kan Yu) - upgrades refunded after scenario 7

|-
| class="fc-route1" |'''第7話：対決!悲しみの青きドナウ! Scenario 7: Showdown! The Sorrowful Blue Danube!'''
| class="fc-route5" |'''第7話：次元歪曲宙域 Scenario 7: Twisted Dimension'''
| class="fc-route6" |'''第7話：反逆の翼 Scenario 7: Wings of Rebellion'''
| class="fc-route2" |'''第7話：暗転 Scenario 7: Blackout'''

|-
|'''Victory Condition:''' Defeat all enemies. Defeat Danube α1 '''Defeat Condition:''' Kouji is defeated. '''SR Point:''' Clear the stage without letting Danube α1 defeat any ally or enemy units. '''Secret Requirements:'''
*Danube α1 (2/3)
**Do not attack or counterattack her, and convince her with Tetsujin 28.
**During the 1-on-1 duel, defeat her with Mazinger Z.
'''Unit Acquisition:'''
*Mazinger Z loses flight and the "Scrander Cut" attack

|'''Victory Condition:''' Defeat all enemies. '''Defeat Condition:''' Mothership is defeated. '''SR Point:''' Defeat both of the DM Beast Bull Damon (Special Type) simultaneously. Using a Support Attack or MAP Attack to defeat them counts as one attack. '''Secret Requirements:''' '''Unit Acquisition:'''
*Baldios (Marin, Oliver, Raita)
*VF-25F and VG-25G gain the Tornado Pack parts
*VF-25S Messiah AP (Ozma)
*RVF-25 Messiah SP (Luca)

|'''Victory Condition:''' Defeat the Tallgeese (Zechs). '''Defeat Condition:''' All allies are defeated. Heero is defeated. '''SR Point:''' Within 4 turns, defeat all other enemies before defeating the Tallgeese. '''Secret Requirements:''' '''Unit Acquisition:'''
*Zeta Gundam (Kamille)
*Methuss (Fa)
*Wing Gundam (Heero)
*Destiny Gundam (Shinn)
*Force Impulse Gundam (Lunamaria)

|'''Victory Condition:''' Defeat all enemies. Reduce the Strike Dog (Ypsilon)'s HP to below 6000. '''Defeat Condition:''' Any ally is defeated. '''SR Point:''' Defeat the Lancelot Conquista (Suzaku). (Retreats when below 6000 HP) '''Secret Requirements:'''
*Zero Points:
**Clear the map. (+1)
'''Unit Acquisition:'''
*Brutishdog (Fyana)
*Diving Beetle (Potaria) - upgrades refunded
*Diving Beetle (Kiderra) - upgrades refunded
*Berserga (Ru Shako)
*Marshdog -> Scopedog (Chirico)
**Gains the Marshdog, Round Mover and Red Shoulder Custom option parts

|-
| colspan="2" class="fc-route1" |'''第8話：嵐の予兆 Scenario 8: Gathering Storm'''
| colspan="2" class="fc-route2" |'''第8話：ツインドライヴ Scenario 8: Twin Drive'''

|-
| colspan="2" |'''Victory Condition:''' Defeat all enemies. '''Defeat Condition:''' Mothership is defeated. Kouji is defeated. Any enemy reaches the Photon Power Lab. '''SR Point:''' Clear the stage without allowing any enemy units to reach the white line. '''Secret Requirements:''' '''Unit Acquisition:'''
*Mazinger Z regains flight and the "Scrander Cut" attack

| colspan="2" |'''Victory Condition:''' Defeat all enemies. '''Defeat Condition:''' Setsuna is defeated. All allies are defeated. '''SR Point:''' All Katharon NPCs must survive the stage. '''Secret Requirements:''' '''Unit Acquisition:'''
*Gundam Exia Repair (Setsuna)
*00 Gundam (Setsuna)

|-
| colspan="2" class="fc-route1" |'''第9話：ぼくらはみんな生きている Scenario 9: We're Not Alone'''
| colspan="2" class="fc-route2" |'''第9話：魔神が目覚める日 Scenario 9: The Day a Demon Awakens'''

|-
| colspan="2" |'''Victory Condition:''' Defeat all enemies. '''Defeat Condition:''' Mothership is defeated. '''SR Point:''' Within 3 player turns, defeat 16 enemies, then defeat Wheel. '''Secret Requirements:''' '''Unit Acquisition:'''
*Sol Gravion (Touga, Eiji, Runa, Mizuki, Eina, Leele)
*Gran Trooper (Faye)

| colspan="2" |'''Victory Condition:''' Defeat all enemies. '''Defeat Condition:''' All allies are defeated; Zero is defeated. '''SR Point:''' Have Zero defeat at least 1 enemy, and do not allow him take any damage before clearing the stage. '''Secret Requirements:''' '''Unit Acquisition:'''
*Burai (C.C.)
*Burai (Zero) - same unit and upgrades as C.C.'s

|-
| colspan="2" class="fc-route1" |'''第10話：平穏との別離 Scenario 10: A Farewell to Peace'''
| colspan="2" class="fc-route2" |'''第10話：もう一人のロックオン Scenario 10: Another Lockon'''

|-
| colspan="2" |'''Victory Condition:''' Defeat all enemies. '''Defeat Condition:''' Any ally is defeated. Mothership is defeated. Brera is defeated. Aoi is defeated. '''SR Point:''' Within 3 player turns, defeat 10 enemies. '''Secret Requirements:''' '''Unit Acquisition:'''
*VF-27y Lucifer (Brera)
*Nova Eagle (Aoi)
*Dancouga Nova (Aoi, Kurara, Sakuya, Johnny)

| colspan="2" |'''Victory Condition:''' Defeat the Hyaku Shiki (Quattro) or Tallgeese (Zechs). Defeat all enemies. '''Defeat Condition:''' All allies are defeated. Marguerite is defeated. '''SR Point:''' After Quattro and Zechs become NPCs, do not allow them to destroy more than 3 enemies each. '''Secret Requirements:''' '''Unit Acquisition:'''
*Cherudim Gundam (Lockon, Haro)
*Hyaku Shiki (Quattro) [NPC]
*Tallgeese (Zechs) [NPC]
*Pearl Nail (Marguerite) [NPC]
*Ptolemaios 2 (Sumeragi, Lasse, Feldt, Mileina)

|-
| colspan="2" class="fc-route1" |'''第11話：扉の向こうから Scenario 11: Beyond The Gate'''
| colspan="2" class="fc-route2" |'''第11話：アレルヤ奪還作戦 Scenario 11: Allelujah Rescue Operation'''

|-
| colspan="2" |'''Victory Condition:''' Defeat all enemies. '''Defeat Condition:''' Mothership is defeated. Marguerite is defeated. '''SR Point:''' Defeat all initial enemies within 2 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Pearl Nail (Marguerite) [NPC]

| colspan="2" |'''Victory Condition:''' Have Setsuna, Kallen, and Chirico reach the target area within 3 turns. Survive until turn 4. Defeat all enemies. '''Defeat Condition:''' Mothership is defeated. Setsuna, Kallen or Chirico are defeated. '''SR Point:''' Before meeting the first victory condition, defeat 20 enemies. (Defeating your 20th enemy in the same action as meeting the condition will count.) '''Secret Requirements:''' '''Unit Acquisition:'''
*Arios Gundam (Allelujah)

|-
| colspan="2" class="fc-route1" |'''第12話：悪意と嘘を越えて Scenario 12: Not Hate, Not Lies'''
| colspan="2" class="fc-route2" |'''第12話：百万のキセキ Scenario 12: One Million Miracles'''

|-
| colspan="2" |'''Victory Condition:''' Defeat all enemies. '''Defeat Condition:''' Mothership is defeated. '''SR Point:''' Defeat all initial enemies within 5 turns, and while doing so, have any one of your allies defeat 6 or more enemies. '''Secret Requirements:''' '''Unit Acquisition:'''

| colspan="2" |'''Victory Condition:''' Defeat all enemies. '''Defeat Condition:''' Kallen is defeated. Mothership is defeated. '''SR Point:''' Defeat Gino, Anya and Suzaku. (Each of them retreat when below 6000 HP) '''Secret Requirements:''' '''Unit Acquisition:'''
*Guren Mk.II A-1 Arm Equipment -> Guren Mk.II Flight (Kallen)
*Zangetsu (Tohdoh)
*Akatsuki Retainer Type (Asahina)
*Akatsuki Retainer Type (Chiba)
*Burai -> Akatsuki Retainer Type (C.C.)
*Ikaruga (Zero, Ohgi, Tamaki, Rakshata)

|-
| colspan="2" class="fc-route1" |'''第13話：時空震動、再び Scenario 13: Time-Space Distortion, Once Again'''
| colspan="2" class="fc-route2" |'''第13話：戦雲の扉 Scenario 13: Gates of War'''

|-
| colspan="2" |'''Victory Condition:''' Defeat all enemies. Defeat the Sapphiada (Wayne) or force it to retreat. '''Defeat Condition:''' Mothership is defeated. Setsuko is defeated. '''SR Point:''' Within 5 turns, defeat all other enemies, then defeat Sapphiada. It will retreat on turn 6 or when its HP falls below 5000. '''Secret Requirements:''' '''Unit Acquisition:'''
*Virgola Glory (Setsuko)

| colspan="2" |'''Victory Condition:''' Defeat all enemies. Defeat the Sapphiada (Wayne) or force it to retreat. '''Defeat Condition:''' Mothership is defeated. Setsuko is defeated. '''SR Point:''' Within 5 turns, defeat all other enemies, then defeat Sapphiada. It will retreat on turn 6 or when its HP falls below 4500. '''Secret Requirements:''' '''Unit Acquisition:'''
*Virgola Glory (Setsuko)

|-
| colspan="2" class="fc-route1" |'''第14話：動き出す世界 Scenario 14: The World Moves Again'''
| colspan="2" class="fc-route2" |'''第14話：与えられた力 Scenario 14: Power Bestowed'''

|-
| colspan="2" |'''Victory Condition:''' Defeat the Guyana Class Land Carrier (Lindt). '''Defeat Condition:''' Mothership is defeated. Allelujah is defeated. '''SR Point:''' Within 4 player turns, defeat all other enemies, then defeat the Guyana Class Land Carrier. '''Secret Requirements:''' '''Unit Acquisition:'''
*All units from the other route
*Gundam Heavyarms (Trowa)
*[[../Sub-Orders|Sub-Orders menu]] is unlocked after this stage

| colspan="2" |'''Victory Condition:''' Defeat the Guyana Class Land Carrier (Lindt). '''Defeat Condition:''' Mothership is defeated. Allelujah is defeated. '''SR Point:''' Within 4 player turns, defeat all other enemies, then defeat the Guyana Class Land Carrier. '''Secret Requirements:'''
*Zero Points:
**Clear the map. (+1)
'''Unit Acquisition:'''
*All units from the other route
*Gundam Heavyarms (Trowa)
*[[../Sub-Orders|Sub-Orders menu]] is unlocked after this stage

|-
| colspan="4" class="fc-std-sc" |'''第15話：マン・アズ・ビフォー Scenario 15: Man as Before'''

|-
| colspan="4" |'''Victory Condition:''' Defeat Marylin's Axio Burglar. Defeat all enemies. '''Defeat Condition:''' Esther is defeated. Mothership is defeated '''SR Point:''' Defeat Jeraud's Diem-Lee within 3 turns of his appearance. '''Secret Requirements:'''
*Nyan Nyan's Famous Tuna Buns
**Move Esther to the position 2 spaces right and 8 spaces up from the bottom left corner, or 1 space left and up from where the Macross Quarter sorties.
'''Unit Acquisition:'''
*Brasta (Crowe)

|-
| colspan="4" class="fc-std-sc" |'''第16話：次元の心央 Scenario 16: Heart of the Dimension'''

|-
| colspan="4" |'''Victory Condition:''' Defeat the Palace Insalaum (Ambroan), or force Seiouki The Insa (Uther) to retreat. Defeat all enemies. '''Defeat Condition:''' Mothership is defeated '''SR Point:''' Deal more than 4500 damage to Seiouki The Insa in one battle. It will retreat immediately after being attacked. '''Secret Requirements:''' '''Unit Acquisition:'''
*Virgola Glory (Setsuko)

|-
| colspan="4" class="fc-std-sc" |'''第17話：朱禁城の花嫁 Scenario 17: A Bride in the Vermilion Forbidden City'''

|-
| colspan="4" |'''Victory Condition:''' Defeat the Shen Hu (Li Xingke). Defeat the Da Longdan. '''Defeat Condition:''' Mothership is defeated. '''SR Point:''' Defeat 12 or more enemies, then defeat Shen Hu; meanwhile, prevent Wufei (as an NPC) from defeating more than 2 enemies. '''Secret Requirements:'''
*Zero Points:
**Shoot down the Da Longdan with Zero. (+1)
'''Unit Acquisition:'''
*Shinkirou (Zero)
**From now on, Ohgi will become captain of the Ikaruga when Shinkirou is deployed
*Shenlong Gundam (Wufei)
*Shen Hu (Li Xingke)

|-
| colspan="4" class="fc-std-sc" |'''第18話：アッシュフォード・ラプソディ Scenario 18: Ashford Rhapsody'''

|-
| colspan="4" |'''Victory Condition:''' Defeat all enemies. '''Defeat Condition:''' Mothership is defeated. Suzaku, Gino or Anya are defeated. '''SR Point:''' Clear the stage within 4 player turns. '''Secret Requirements:'''
*Adrenaline Ampoule
**Move Gino to the position 3 spaces up and 1 space right from the bottom left corner of the map.
'''Unit Acquisition:'''
*Lancelot Conquista (Suzaku)
*Tristan (Gino)
*Mordred (Anya)

|-
| colspan="4" class="fc-std-sc" |'''第19話：それぞれの戦場 Scenario 19: Each Other's Battlefield'''

|-
| colspan="4" |'''Victory Condition:''' Defeat all enemies. Survive for 3 turns after the Arche Gundam (Ali-Al Saachez) appears. '''Defeat Condition:''' Mothership is defeated. Heero or Zechs are defeated. '''SR Point:''' Within 3 player turns, defeat all other enemies, then defeat the Tallgeese (Zechs). '''Secret Requirements:''' '''Unit Acquisition:'''
*Tallgeese (Zechs)
*Wing Gundam (Heero)

|-
| colspan="4" class="fc-std-sc" |'''第20話：白と黒と Scenario 20: Black and White'''

|-
| colspan="4" |'''Victory Condition:''' Defeat all enemies. '''Defeat Condition:''' Roger is defeated. Any ally is defeated. Mothership is defeated. '''SR Point:''' Within 6 turns, defeat all other enemies, then defeat the Pearl Fang (Marilyn). (Retreats at 10000 HP) '''Secret Requirements:'''
*Kamina's Glasses (1/2) and Mark of the Brave (1/4)
**Choose the Dark Continent route.
*Auxiliary GN Drive (1/2)
**Choose the Space route.
'''Unit Acquisition:'''
*Berserga (Ru Shako)
*Big O (Roger, Dorothy)
*∀ Gundam (Loran)
*Emperanza (Gain)
*Dominator (Cynthia)
|} 

==Stages 21 - 31==
{| width="100%"
|- class="fc-route-h"
| width="50%" |'''「暗黒大陸へ向かう] Go to the Dark Continent''' Zambot 3 Trider G7 Tetsujin 28 VOTOMS Gundam X Turn A Gundam Shin Mazinger Z Dai-Guard The Big O Overman King Gainer Code Geass ''Recruit:'' Getter Robo Armageddon Gurren Lagann Xabungle
| width="50%" |'''「宇宙に上がる」 Go to Space''' Baldios Godmars Zeta Gundam Gundam Wing Gundam 00 Gundam Seed Destiny Dancouga Nova Macross Frontier Aquarion Gravion

|-
| class="fc-route1" |'''第21話：時の流れに Scenario 21: Flowing Time'''
| class="fc-route2" |'''第21話：伝説の歌声 Scenario 21: Legendary Voice'''

|-
|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Any ally defeated. Mothership is destroyed. All allies are destroyed '''SR Point:''' Destroy all the "Katora Leader" enemies before they escape. If they touch any part of the white line on the west side of the map, they will escape. '''Secret Requirements:''' '''Unit Acquisition:'''
*Tower (Hayato, Shikishima)
*Grapearl (Gimmy)
*Grapearl (Darry)

|'''Victory Condition:''' Defeat all enemies. '''Defeat Condition:''' Mothership is defeated. Alto or Basara are defeated. '''SR Point:''' Defeat all enemies within 3 turns, while preventing the Macross Quarter from taking any damage. '''Secret Requirements:''' '''Unit Acquisition:'''
*VF-19 Kai Fire Valkyrie (Basara) [NPC]

|-
| class="fc-route1" |'''第22話：出撃！！新たなる戦士たち！ Scenario 22: Sortie!! New Warriors!'''
| class="fc-route2" |'''第22話：ランカ・アタック Scenario 22: Ranka Attack'''

|-
|'''Victory Condition:''' Defeat all enemies. '''Defeat Condition:''' Mothership is defeated. Go is defeated. '''SR Point:''' Clear the stage within 4 player turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Shin Getter 1 (Go)
*Stelva (Schwartz)
*Shin Getter (Go, Kei, Gai)

|'''Victory Condition:''' Defeat all enemies. '''Defeat Condition:''' Mothership is defeated. Canaria is defeated. Basara is defeated. '''SR Point:''' Destroy 50 or more Vajra within 5 turns, while preventing Canaria from taking any damage. '''Secret Requirements:''' '''Unit Acquisition:'''
*Gundam Sandrock (Quatre)
*VF-27y Lucifer (Brera)
*VF-19 Kai Fire Valkyrie (Basara)
**Gains Battloid form and the "MY FRIENDS" & "TRY AGAIN" songs
*VF-22S Sturmvogel II (Gamlin)

|-
| class="fc-route1" |'''第23話：あなたは何もわかってない Scenario 23: You Do Not Know Anything'''
| class="fc-route2" |'''第23話：悲しみのカトル Scenario 23: Grief Stricken Quatre'''

|-
|'''Victory Condition:''' Defeat all enemies. '''Defeat Condition:''' Any ally is defeated. Mothership is defeated. '''SR Point:''' Defeat all initial enemies within 3 turns. '''Secret Requirements:'''
*Kamina's Glasses (2/2)
**Move Simon to the Statue of Kamina on the map (4 spaces down and 4 left from where Simon sorties).
'''Unit Acquisition:'''
*Gurren Lagann (Simon)
*Walker Gallia (Jiron, Chill)
*Xabungle (Elche, Fatman)

|'''Victory Condition:''' Defeat the Wing Gundam Zero. '''Defeat Condition:''' Any ally is defeated. Mothership is defeated. Duo or Wufei are defeated. '''SR Point:''' Within 6 turns, defeat all other enemies, then defeat Wing Gundam Zero. '''Secret Requirements:''' '''Unit Acquisition:'''
*Strike Freedom Gundam (Kira)
*∞ Justice Gundam (Athrun)
*Gundam Deathscythe (Duo)
*Shenlong Gundam (Wufei)

|-
| class="fc-route1" |'''第24話：あなたはもう必要ないのです Scenario 24: You Are No Longer Needed'''
| class="fc-route2" |'''第24話：ゼロと呼ばれたＧ Scenario 24: The Gundam They Call Zero'''

|-
|'''Victory Condition:''' Defeat the Enkidudu (Viral). Reduce Shin Dragon's HP to below 10000. Defeat all enemies. '''Defeat Condition:''' Mothership is defeated. Simon or Go are defeated. '''SR Point:''' Within 3 turns, defeat all other enemies, then defeat Viral. (Timp, Kan Yu and Beck will retreat when they reach the south edge of the map.) '''Secret Requirements:'''
*Mark of the Brave (2/4)
**Defeat all other enemies, then have Simon defeat Viral.
'''Unit Acquisition:'''
*Shin Getter 1, 2, and 3 gain the "Shin Getter Change Attack" attack

|'''Note:''' Flying units in this map count as being in space terrain.
<hr>'''Victory Condition:''' Defeat the Wing Gundam Zero. Survive until turn 7. '''Defeat Condition:''' Setsuna is defeated. Mothership is defeated. Tieria is defeated. '''SR Point:''' Defeat 60 or more enemies within 6 turns. '''Secret Requirements:'''
*Auxiliary GN Drive (2/2)
**Move Duo 6 spaces down from the upper right corner of the map.
'''Unit Acquisition:'''
*Ptolemaios 2 gains Anew as a sub-pilot
*Gundam Deathscythe -> Gundam Deathscythe Hell (Duo)
*Gundam Sandrock -> Gundam Sandrock Custom (Quatre)
*Shenlong Gundam -> Altron Gundam (Wufei)
*Taurus (Hilde)
*Seravee Gundam gains the "Seravim Divide Attack" attack

|-
| colspan="2" class="fc-std-sc" |'''第25話：終わらない約束 Scenario 25: Neverending Promise'''

|-
| colspan="2" |'''Victory Condition:''' Defeat all enemies. '''Defeat Condition:''' Renton is defeated. Mothership is defeated. Crowe or Esther are defeated. '''SR Point:''' Within 4 turns, defeat all ADAMON units, then defeat Pearl Nail (Marguerite). It will retreat on turn 5 or when its HP falls below 10,000. '''Secret Requirements:''' '''Unit Acquisition:'''
*Nirvash spec2 (Renton, Nirvash)
*Gunleon (Rand, Mel)
*Brasta Es (Esther)

|-
| colspan="2" class="fc-std-sc" |'''第26話：冥府への転落 Scenario 26: The Fall into Netherworld'''

|-
| colspan="2" |'''Victory Condition:''' Defeat all enemies. Defeat Abdora U6. '''Defeat Condition:''' Boss is defeated. Mothership is defeated. Koji is defeated. Any Insalaum unit defeats Abdora U6. '''SR Point:''' Within 3 turns, defeat all other enemies, then defeat Abdora U6. Do not allow any Insalaum or Kedora enemies to shoot each other down. '''Secret Requirements:''' '''Unit Acquisition:'''
*Boss Borot (Boss, Nuke, Mucha)
*Brasta loses both SPIGOT-VX weapons for this map
*VF-19 Kai Fire Valkyrie (Basara)
*VF-22S Sturmvogel II (Gamlin)

|-
| colspan="2" class="fc-std-sc" |'''第27話：ゼロＶＳゼロ Scenario 27: Zero VS Zero'''

|-
| colspan="2" |'''Victory Condition:''' Defeat Wing Gundam Zero or Altron Gundam. Defeat Wing Gundam Zero. Defeat all enemies. '''Defeat Condition:''' Any ally is defeated. Mothership is defeated. '''SR Point:''' After the A-Laws units sortie, clear the stage within 4 turns of their appearance. '''Secret Requirements:'''
*Zero Points:
**Reduce Wing Gundam Zero's HP to below 60% (+2)
**Or, shoot down Wufei. (+1)
**'''Note:''' If you fulfill one Zero Point condition, you cannot fulfill the other.
'''Unit Acquisition:'''

|-
| colspan="2" class="fc-std-sc" |'''第28話：暗黒よりの使者 Scenario 28: Messenger from the Darkness'''

|-
| colspan="2" |'''Victory Condition:''' Defeat all enemies. Defeat Black Ox. Defeat Bizzarm (Gestalt). '''Defeat Condition:''' Mothership is defeated. Shotaro or Takeru are defeated. Black Ox is defeated. '''SR Point:''' Have the NPC Black Ox defeat 3 or more enemies. '''Secret Requirements:''' '''Unit Acquisition:'''
*God Sigma (Toshiya, Julie, Kiraken)
*Black Ox (Black Ox) [NPC]

|-
| colspan="2" class="fc-std-sc" |'''第29話：戦士達の叫び Scenario 29: Warriors' Cry'''

|-
| colspan="2" |'''Victory Condition:''' Defeat all enemies. '''Defeat Condition:''' Mothership is defeated. Setsuna, Kamille or Allelujah are defeated. Heero is defeated. '''SR Point:''' Clear the stage within 4 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Gundam Epyon (Heero)
*00 Gundam -> 00 Raiser (Setsuna, Saji)
*Wing Gundam -> Wing Gundam Zero (Heero)
*Taurus (Noin)
*Gundam Heavyarms -> Gundam Heavyarms Custom (Trowa)
*Allelujah gains the "Fusion" pilot skill
*Zeta Gundam gains the "Biosensor" ability and the "Waverider Assault" attack
*Taurus (Hilde) gets a paint change and gains the "Beam Saber" attack

|-
| colspan="2" class="fc-std-sc" |'''第30話：一点突破 Scenario 30: Breakthrough Point'''

|-
| colspan="2" |'''Victory Condition:''' Gain, Lockon and Mikhail reach the designated points within 5 turns. Defeat all enemies. '''Defeat Condition:''' Mothership is defeated. Gain, Lockon or Mikhail are defeated. Reach the enemy phase of the 5th turn. Crowe is defeated. '''SR Point:''' Defeat all enemies except Rook ADAMON and fulfill the first victory condition within 3 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Orguss (Kei)
*Gunleon (Rand, Mel)

|-
| colspan="2" class="fc-std-sc" |'''第31話：ジ・アンブレイカブル Scenario 31: The Unbreakable'''

|-
| colspan="2" |'''Victory Condition:''' Deal 30,000 or more damage to Diamund (Jeraud). Defeat Diamund. '''Defeat Condition:''' Mothership is defeated. Crowe is defeated. '''SR Point:''' Defeat 20 enemies and fulfill the first victory condition within 3 turns. '''Secret Requirements:'''
*'''Note:''' Danube α1 and Anew are mutually exclusive secrets; you cannot finish both.
*Danube α1 (3/3)
**Choose the Earth route.
*Anew's survival (1/2)
**Choose the Space route.
*Super Repair Kit
**Move Crowe to the position 6 spaces up and 13 spaces right from the bottom left corner of the map.
'''Unit Acquisition:'''
*Axio Scott SP-II (Crowe)
*Brasta -> Li-Brasta R or Li-Brasta B (Crowe)
**Before the stage, choose Plan A (Melee/Super) for Li-Brasta R, or Plan B (Ranged/Real) for Li-Brasta B.
|} 

== Stages 32 - 40==
{| width="100%"
|- class="fc-route-h"
|'''「陽動部隊に参加するために地上に残る」 Stay on Earth to join the diversion team''' Zambot 3 Trider G7 Godsigma Baldios Tetsujin 28 Godmars Xabungle VOTOMS Dancouga Nova Getter Robo Armageddon Shin Mazinger Z Dai-Guard The Big O Overman King Gainer Gravion Code Geass Gurren Lagann ''Recruit:'' Dancouga
|'''「衛星兵器を破壊するために宇宙に上る」 Go to space to destroy the satellite weapon''' Orguss Zeta Gundam Gundam Wing Gundam X Turn A Gundam Gundam Seed Destiny Gundam 00 Macross Frontier Macross 7 Aquarion Eureka 7 ''Recruit:'' Char's Counterattack

|-
| class="fc-route3" |'''第32話：奪われた鉄人 Scenario 32: The Stolen Tetsujin'''
| class="fc-route4" |'''第32話：メメントモリ攻略戦 Scenario 32: Assault on Memento Mori'''

|-
|'''Victory Condition:''' Reduce Tetsujin 28's HP to below 2000. Defeat Branch Robo #5. '''Defeat Condition:''' Tetsujin 28 or Black Ox are defeated. Any ally is defeated. Mothership is defeated. '''SR Point:''' Defeat the Pearl Fang (Marilyn). It will retreat 4 turns after it appears or when its HP falls below 10000. '''Secret Requirements:''' '''Unit Acquisition:'''
*Black Ox (Black Ox)
*Kokubogar (Iizuka)
*Danube α1 (Lorelei)
*Tetsujin 28 gains the "Tetsujin Full Power" attack

|'''Victory Condition:''' Defeat Lindt's Baikal Class Cruiser and have Ptolemaios 2 reach the designated point within 5 turns. '''Defeat Condition:''' Mothership is defeated. Setsuna or Amuro are defeated. Reach 6th turn. '''SR Point:''' Before fulfilling the victory condition, defeat all enemies. '''Secret Requirements:''' '''Unit Acquisition:'''
*00 Raiser gains the "Trans-AM Raiser Sword" attack (and MAP version)
*Cherudim Gundam gains the "GN Heavy Weapon" and "Trans-AM Consecutive Fire" attacks
*Seravee Gundam gains the "GN Heavy Weapon (MAP)" attack and "Trans-AM System" gains +500 power
*Arios Gundam gains the "GN Heavy Weapon" attack
*ν Gundam (Amuro)
*Ptolemaios 2 gains the "Trans-AM" command

|-
| class="fc-route3" |'''第33話：ブラック・アヴェンジャー Scenario 33: Black Avenger'''
| class="fc-route4" |'''第33話：散りゆく光の中で Scenario 33: Scattered Light'''

|-
|'''Victory Condition:''' Defeat all enemies within 5 turns. '''Defeat Condition:''' Mothership is defeated. Reach 6th turn. '''SR Point:''' Clear the stage within 3 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Black Getter (Ryoma)

|'''Note:''' Only flight-capable units can deploy in this stage.
<hr>'''Victory Condition:''' Destroy all Solar Panels. '''Defeat Condition:''' Mothership is defeated. Allelujah or Loran are defeated. Any Solar Panel reaches the edge of the map. '''SR Point:''' Destroy 100 Solar Panels. (Any that are destroyed by enemies or NPCs don't count.) '''Secret Requirements:''' '''Unit Acquisition:'''
*Arios Gundam gains the "GN Archer Combination Attack" attack
*∀ Gundam gains the "Moonlight Butterfly" attack (and MAP version)
*Tieren All Terrain Type (Sergei) [NPC]
*Gundam Epyon (Milliardo) [NPC]
*GN-X III (Andrei) [NPC]
*GN-X III (Colasaur) [NPC]
*Ahead Smultron (Louise) [NPC]

|-
| class="fc-route3" |'''第34話：亡者再臨 Scenario 34: Resurrection of the Dead'''
| class="fc-route4" |'''第34話：白き牙 Scenario 34: White Fang'''

|-
|'''Victory Condition:''' Defeat all enemies. '''Defeat Condition:''' Any ally is defeated. Mothership is defeated. Two or more Guzards reach Dragon's Hive. '''SR Point:''' Clear the stage without letting any Guzards reach Dragon's Hive. '''Secret Requirements:''' '''Unit Acquisition:'''
*R-Daigun (Eida)
*Final Dancouga (Shinobu, Sara, Masato, Ryou, Alan)
*Dancouga Nova becomes Dancouga Nova MAXGOD, and gains Eida as a subpilot

|'''Victory Condition:''' Defeat the Hyaku Shiki (Quattro). Defeat the Gundam Epyon (Milliardo). '''Defeat Condition:''' Mothership is defeated. Lockon is defeated. '''SR Point:''' Within 3 turns, defeat all other enemies, then defeat the Hyaku Shiki. '''Secret Requirements:'''
*Anew's survival (2/2)
**You must sortie Setsuna.
**After Quattro joins you, attack (but do not defeat) Anew and Milliardo at least once.
**Shoot down Mr. Bushido and Ali Al-Saachez.
**Shoot down Anew using Lockon's second Trans-AM attack.
**Before you complete all these steps, Setsuna must have at least 70 kills.
**'''Note:''' Don't have the Ptolemaios 2 in Trans-AM Mode when these steps are completed, or Anew will be temporarily unuseable due to a bug. ([[../Secrets#Anew_Returner|Details]])
'''Unit Acquisition:'''
*Hyaku Shiki (Quattro)
*Anew leaves the Ptolemaios 2, unless secret is met
*Hyaku Shiki gains the "Mobile Suit Combination" attack

|-
| class="fc-route3" |'''第35話：昨日への決別 Scenario 35: Farewell to Yesterday'''
| class="fc-route4" |'''第35話：明日へのあがき Scenario 35: Struggle for Tomorrow'''

|-
|'''Victory Condition:''' Defeat all enemies. '''Defeat Condition:''' Mothership is defeated. Crowe or Asakim are defeated. '''SR Point:''' Accomplish one of the following within 3 turns:
*Defeat 16 enemies
*Deal 20,000 damage to Diamund
*Reduce Rook ADAMON's HP to under 70% or less
''Note:'' Defeating the Rook ADAMON (at any time) restores all SP to your units. 
'''Secret Requirements:''' '''Unit Acquisition:'''
*Shurouga (Asakim)
*King Gainer gains the "Overheat" attack

|'''Victory Condition:''' Defeat all enemies. '''Defeat Condition:''' Mothership is defeated. Crowe is defeated. '''SR Point:''' Accomplish one of the following within 3 turns:
*Defeat 16 enemies
*Deal 20,000 damage to Diamund
*Reduce Rook ADAMON's HP to under 70% or less
''Note:'' Defeating the Rook ADAMON (at any time) restores all SP to your units. 
'''Secret Requirements:''' '''Unit Acquisition:'''
*Shurouga (Asakim)

|-
| colspan="2" class="fc-std-sc" |'''第36話：加速する世界 Scenario 36: Accelerating World'''

|-
| colspan="2" |'''Victory Condition:''' Defeat all enemies. Defeat the Arietis (Aim) or force it to retreat. '''Defeat Condition:''' Any ally is defeated. Mothership is defeated. Marguerite is defeated. '''SR Point:''' Defeat the Arietis. It will retreat 4 turns after it appears or when its HP falls below 10000. '''Secret Requirements:''' '''Unit Acquisition:'''
*Gold SUMO (Harry)
*Gundam Airmaster Burst (Witz)
*Gundam Leopard Destroy (Roybea)
*Eternal (Lacus, Waltfield, Meyrin)
*Eternal and Strike Freedom Gundam/∞ Justice Gundam gain the "METEOR Sword" and "METEOR Full Burst" combo attacks
*Destiny Gundam gains the "Full Weapons Combination" attack
*Gundam X Divider (Jamil)
*Jenice Kai Enil Custom (Enil)
*Gundam DX combines with G-Falcon and gains Para as a sub-pilot
*Pearl Nail (Marguerite)

|-
| colspan="2" class="fc-std-sc" |'''第37話：銀河をステージに Scenario 37: The Galaxy is the Stage'''

|-
| colspan="2" |'''Victory Condition:''' Defeat all enemies. '''Defeat Condition:''' Mothership is defeated. Basara or Gamlin are defeated. '''SR Point:''' Defeat all initial enemies within 3 turns. '''Secret Requirements:'''
*Zero Points:
**Zero has accumulated 70 kills or more by the end of the map. This is the last available Zero Point. (+1)
*Mark of the Brave (3/4)
**Choose the Dark Continent route.
'''Unit Acquisition:'''
*VF-19 Kai Fire Valkyrie gains the "DYNAMITE EXPLOSION" song
*VF-22S Sturmvogel II can initiate the "DYNAMITE EXPLOSION" combo attack with VF-19 Kai Fire Valkyrie

|- class="fc-route-h"
|'''「本隊と共に暗黒大陸に向かう」 Head to the Dark Continent with the Main Group''' Everybody else
|'''「黒の騎士団と共にエリア11に向かう」 Head to Area 11 with the Order of the Black Knights''' Code Geass Wing Gundam Zero (Heero)

|-
| class="fc-route1" |'''第38話：告げられる絶望 Scenario 38: Confessions of Despair'''
| class="fc-route2" |'''第38話：過去からの刺客 Scenario 38: Assailant from the Past'''

|-
|'''Victory Condition:''' '''Part 1:''' Defeat all enemies. '''Part 2:''' Defeat Timp, Kan Yu, Beck, and Viral. Defeat Advanced Mugann. '''Defeat Condition:''' '''Part 1:''' Yomako is defeated. '''Part 2:''' Mothership is defeated. Simon is defeated. '''SR Point:''' In the second part, defeat all enemies and fulfill the first victory condition within 3 turns. '''Secret Requirements:'''
*Mark of the Brave (4/4)
**If all steps were met, Viral will drop it when he is defeated.
'''Unit Acquisition:'''
*Yomako (Yomako)
*Walker Gallia gains the "ICBM Toss" attack
*Gurren Lagann gains Viral as a sub-pilot, unlocks the "W Boomerang Spiral" and "Giga Drill Maximum" attacks and "Giga Drill Break" gains +300 power
*Daitarn 3 (Banjo)
*Daitarn 3, Zambot 3 and Trider G7 gain the "3-3-7 Beat" and "Invincible Combination" combo attack

|'''Victory Condition:''' Defeat all enemies. '''Defeat Condition:''' Mothership is defeated. Kallen is defeated. '''SR Point:''' Defeat all initial enemies with 3 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Shen Hu (Li Xingke)
*Guren Mk.II Flight (Kallen)

|-
| colspan="2" class="fc-std-sc" |'''第39話：禁断の継承者 Scenario 39: The Forbidden Successor'''

|-
| colspan="2" |'''Victory Condition:''' '''Part 1:''' Defeat the Strike Dog (Ypsilon) or force it to retreat. Defeat the Siegfried (V.V.). '''Part 2:''' Defeat the Strike Dog. '''Defeat Condition:''' '''Part 1:''' Zero, Chirico or Rolo are defeated. '''Part 2:''' Chirico is defeated. '''SR Point:''' In the first part, defeat all enemies within 3 turns, saving the Strike Dog for last (it retreats when under 8000 HP). '''Secret Requirements:'''
*DM Adapter
**In the first part, move Zero to the position 3 spaces down and 13 spaces right from the top left corner of the map.
'''Unit Acquisition:'''
*Scopedog's Red Shoulder Custom parts become the TC-LRS parts
*Vincent Flight Type (Rolo)
*Sutherland (Jeremaiah)
*Scopedog (Chirico)
*Akatsuki Retainer Type (C.C.)

|-
| colspan="2" class="fc-std-sc" |'''第40話：歌え、誰かのために Scenario 40: Singing, but for Who?'''

|-
| colspan="2" |'''Victory Condition:''' Defeat all enemies. Defeat all enemies within 5 turns after the Mobile Dolls appear. '''Defeat Condition:''' Mothership is defeated. Kei or Renton are defeated. '''SR Point:''' Defeat all initial enemies with 3 turns. '''Secret Requirements:'''
*Hyper Jammer (1/2)
**Choose the Japan route.
*Scopedog Twin Missile Pods (1/2) and 2nd Mark of the Brave (1/2)
**Choose the Frontier Fleet route.
'''Unit Acquisition:'''
*Guren Mk.II Flight -> Guren SEITEN Eight Elements (Kallen)
*Orguss gains the "Orguss Combination" attack
|} 

== Stages 41 - 49==
{| width="100%"
|- class="fc-route-h"
|'''「日本!へ向かう」 Head to Japan''' Zambot 3 Daitarn 3 Trider G7 Godsigma Baldios Tetsujin 28 Godmars Xabungle Dancouga Dancouga Nova Getter Robo Armageddon Shin Mazinger Z Dai-Guard The Big O Overman King Gainer Gravion Aquarion Gurren Lagann
|'''「フロンティア船団に向かう」 Head to the Frontier Fleet''' Orguss Zeta Gundam Char's Counterattack Gundam Wing Gundam X Turn-A Gundam Gundam SEED Destiny Gundam 00 Macross 7 Macross Frontier Code Geass Eureka 7 ''Recruit:'' VOTOMS

|-
| class="fc-route3" |'''第41話：遺恨！くろがね屋の一番長い日！ Scenario 41: Regret! Kurogane House's Longest Day!'''
| class="fc-route4" |'''第41話：トライアングラー Scenario 41: Triangular'''

|-
|'''Victory Condition:''' Defeat Energer Z. Defeat all enemies. '''Defeat Condition:''' Mothership is defeated. Kouji is defeated. '''SR Point:''' Within 3 turns, defeat all other enemies, then defeat Energer Z. '''Secret Requirements:'''
*Hyper Jammer (2/2)
**Move Koji over to the Kabuto House (2 spaces down and 8 spaces left from the top right corner).
'''Unit Acquisition:'''
*Boss Borot (Boss, Nuke, Mucha)
*Venus A gains the "Mazinger Corps Attack" attack
*Mazinger Z upgrades:
**Loses the "Scrander Cut" attack, gains the "Big Bang Punch" attack (and MAP version)
**Gains +10 mobility, +1 movement and A-rank in all terrains

|'''Victory Condition:''' '''Part 1:''' Defeat all enemies. '''Part 2:''' Survive for 5 turns, or defeat all enemies. '''Defeat Condition:''' '''Part 1:''' Klan is defeated. '''Part 2:''' Alto or Klan are defeated. Any enemy unit reaches the target area. '''SR Point:''' In the second part, defeat all enemies within 4 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Armored Klan (Klan)
*VF-22S Sturmvogel II gains the "Large Anti-Ship Reaction Warhead" attack
*VF-25F and VF-25G both gain the "Reaction Warhead" and "MDE Warhead (MAP)" attacks

|-
| class="fc-route3" |'''第42話：父ちゃんから受け継いだもの Scenario 42: What I Inherited from Father'''
| class="fc-route4" |'''第42話：異能者 Scenario 42: Abnormality'''

|-
|'''Victory Condition:''' Defeat all enemies. '''Defeat Condition:''' Mothership is defeated. Watta or Takeru are defeated. '''SR Point:''' Kakikouji must earn more than 35000 funds from shooting down enemies by the end of the stage. '''Secret Requirements:''' '''Unit Acquisition:'''
*Shuttle -> New Shuttle (Kakikouji, Atsui, Tohachiro, Ikue)
*Trider G7 gains the "Trider Lure" attack
*Zambot 3 gains the "Combination Attack" attack
*Baldios gains the "Baldirosier" attack
*God Sigma gains the "Trinity Wing" attack
*Dai Guard gains the "Great Knot Punisher" attack

|'''Victory Condition:''' Chirico reaches the target area, or defeat all enemies. Defeat the Gadessa, Garazzo and Gundam Epyon. '''Defeat Condition:''' Mothership is defeated. Chirico is defeated. '''SR Point:''' Defeat all enemies before Chirico reaches the target area. '''Secret Requirements:''' '''Unit Acquisition:'''
*Scopedog Round Mover (Chirico) [NPC]
*Berserga (Ru Shako)
*Brutishdog (Fyana)
*Scopedog TC-LRS (Gregore)

|-
| class="fc-route3" |'''第43話：闇を断つ牙 Scenario 43: The Fang that Crushes Darkness'''
| class="fc-route4" |'''第43話：修羅 Scenario 43: Carnage'''

|-
|'''Victory Condition:''' Defeat the Original Dancouga (Moon WILL). '''Defeat Condition:''' Mothership is defeated. Touga, Shinobu or Aoi are defeated. Any enemy unit passes through the second defense line. '''SR Point:''' Within 3 turns, defeat all other enemies, then defeat Original Dancouga, while preventing any enemies from passing through the first defense line. '''Secret Requirements:''' '''Unit Acquisition:'''
*God Sigma Gravion (Sandman)
*Sol Gravion and God Sigma Gravion gain the "Choujuu Enouzan" combo attack
*Dragon's Hive (F.S, Tanaka, WILL)
*Dancouga Nova MAXGOD can initiate the "Absolute Nova Beast" combo attack with Dragon's Hive
*Final Dancouga gains the "Final Dankuukougaken" attack

|'''Victory Condition:''' '''Part 1:''' Defeat the Rabidly Dog (Chirico). '''Part 2:''' Defeat all enemies. '''Defeat Condition:''' '''Part 1:''' Mothership is defeated. Fyana is defeated. '''Part 2:''' Chirico or Fyana are defeated. '''SR Point:''' In the first part, have Fyana, Shako and Gregore defeat 3 enemies each, then defeat the Rabidly Dog within 4 turns. (Do not allow Shako or Gregore to be shot down.) '''Secret Requirements:'''
*2nd Mark of the Brave (2/2)
**In the first part, move Shako 8 spaces up and 1 space right from his sortie position.
*Scopedog Twin Missile Pods (2/2)
**In the second part, Chirico and Fyana must defeat at least 3 enemies each.
**Chirico must have at least 70 kills by the end of this stage.
'''Unit Acquisition:'''
*Rabidly Dog (Chirico)
*Scopedog
*Scopedog TC-ISS
*Scopedog Twin Missile Pods - additional unit for Chirico and Fyana
*Akatsuki Retainer Type (C.C.)

|-
| colspan="2" class="fc-std-sc" |'''第44話：降臨！！終末を呼ぶ邪神！ Scenario 44: Advent!! The Evil God that Brings Forth the End!'''

|-
| colspan="2" |'''Victory Condition:''' Defeat Shin Dragon. Defeat Metal Beast Dragon (Saotome). '''Defeat Condition:''' Mothership is defeated. Go, Ryoma or Apollo are defeated. '''SR Point:''' Within 4 turns, defeat all other enemies, then defeat Shin Dragon. '''Secret Requirements:''' '''Unit Acquisition:'''
*Yoko M Tank (Yoko)
*King Kittan (Kittan)
*Grapearl gains the "Spiral Barrier Warhead Rifle" attack
*Tower (Hayato, Shikishima)
*Shin Getter loses Go, Kei and Gai as pilots
*Shin Getter gains Ryoma, Hayato and Benkei as pilots
**Black Getter also gains Hayato and Benkei as sub-pilots after the stage
*Solar Aquarion gains the "Solar Sword" attack (for pilot set A only)
*Shin Getter 1 gains the "Stoner Sunshine" attack
*Stelva gains the "Super Robot Army Simultaneous Attack" attack

|-
| colspan="2" class="fc-std-sc" |'''第45話：次元力 Scenario 45: Dimension Power'''

|-
| colspan="2" |'''Victory Condition:''' Defeat the Rook ADAMON within 5 turns. Defeat Seiouki The Insa (Uther). '''Defeat Condition:''' Mothership is defeated. Crowe is defeated. Reach the 6th turn. '''SR Point:''' Within 4 turns, defeat all other enemies, then defeat Rook ADAMON. '''Secret Requirements:''' '''Unit Acquisition:'''
*Li-Brasta gains the "Unbreakable Fulcrum" attack
*Pearl Nail (Marguerite)

|-
| colspan="2" class="fc-std-sc" |'''第46話：失われし聖王国 Scenario 46: The Lost Holy Kingdom'''

|-
| colspan="2" |'''Victory Condition:''' Defeat all enemies other than the Palace Insalaum (Ambroan). Defeat Diamund (Wayne). '''Defeat Condition:''' Mothership is defeated. Roger or Crowe are defeated. Palace Insalaum is defeated. '''SR Point:''' Defeat 24 enemies within 2 player turns. '''Secret Requirements:'''
*Insalaum's Secret Treasure
**Move Marguerite to the position 2 spaces down and 9 spaces left from the top right corner of the map.
'''Unit Acquisition:'''
*Nirvash spec2 -> Nirvash specV (Renton, Eureka, Nirvash)
*Big O gains the "Final Stage" attack
*Brasta Es (Esther)
**Gains +400 HP, +100 armor, +5 mobility, +5 sight, +300 weapon power (+400 for ACP Iota), +5 hit for all weapons, +2 ammo for ACP Iota, and a third part slot

|-
| colspan="2" class="fc-std-sc" |'''第47話：死線！総攻撃Ｄｒ．ヘル！ Scenario 47: Line of Death! Dr. Hell's Final Assault!'''

|-
| colspan="2" |'''Victory Condition:''' Defeat Ashura, Brocken, and Pygman. Defeat Hell King Gordon (Dr. Hell). '''Defeat Condition:''' Mothership is defeated. Kouji is defeated. '''SR Point:''' Within 4 turns, defeat all other enemies, then fulfill the first victory condition. You must also defeat Ashura, Brocken, and Pygman in the same turn. '''Secret Requirements:'''
*Super Alloy Z
**Deploy Boss and move him to the position 1 space up and left from the bottom right corner of the map.
'''Unit Acquisition:'''
*Mazinger Z gains the "100 Rapid Fire Rocket Punches" attack

|-
| colspan="2" class="fc-std-sc" |'''第48話：ゴッドブレス・ユニバース Scenario 48: God Bless Universe'''

|-
| colspan="2" |'''Victory Condition:''' Defeat all enemies. Defeat Emperor Muge. '''Defeat Condition:''' Mothership is defeated. Shinobu, Aoi or Basara are defeated. '''SR Point:''' Defeat 50 enemies within 4 player turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Final Dancouga and Dancouga Nova MAXGOD gain the "Dankuusougaken" combo attack
*Cosmo Crusher gains Rose as a sub-pilot

|-
| colspan="2" class="fc-std-sc" |'''第49話：ゼロとルルーシュ Scenario 49: Zero and Lelouch'''

|-
| colspan="2" |'''Victory Condition:''' Defeat all enemies. '''Defeat Condition:''' Mothership is defeated. Zero, C.C. or Kallen are defeated. '''SR Point:''' Defeat the Avalon (Schneizel). It will retreat if any of the following conditions are met:
*Avalon's HP drops below 10,000
*Turn 5 is reached
*There are 10 or fewer enemy units left on the map (including Avalon)
'''Secret Requirements:'''
*Vincent Flight Type and Terminus 303 SP
**These units are exclusive to the Believe in Zero route.
'''Unit Acquisition:'''
*Sutherland Sieg (Jeremiah) - stays if you choose Believe in Zero
*Vincent Flight Type (Rolo) - stays if you choose Believe in Zero
*Upon choosing the Don't Believe in Zero route:
**Shinkirou (Zero)
**Akatsuki Retainer Type (C.C.)
|} 

==Stages 50 - END==
{| width="100%"
|- class="fc-route-h"
|'''「ゼロを信じない」 Don't Believe in Zero''' Zero Requiem / Default route
|'''「ゼロを信じてみる」 Believe in Zero''' The Order of the Black Knights / IF route Requires 5 or more Zero Points, or New Game+

|-
| class="fc-route1" |'''第50話：皇帝失格 Scenario 50: The Emperor Dethroned'''
| class="fc-route2" |'''第50話：超合集国決議第壱号 Scenario 50: U.F.N. Resolution #1'''

|-
|'''Victory Condition:''' '''Part 1:''' Defeat Charles' Logress-Class Battleship. '''Part 2:''' Defeat all enemies. '''Defeat Condition:''' '''Part 1:''' Mothership is defeated. Charles reaches the target area. Zero is defeated. '''Part 2:''' Mothership is defeated. '''SR Point:''' In the first part, defeat all other enemies, then defeat Charles. '''Secret Requirements:''' '''Unit Acquisition:'''
*Shinkirou (Zero)

|'''Victory Condition:''' Defeat Charles' Logress-Class Battleship. Defeat all enemies. '''Defeat Condition:''' Mothership is defeated. Zero is defeated. '''SR Point:''' Within 3 turns, defeat all other enemies, then defeat Charles. '''Secret Requirements:''' '''Unit Acquisition:'''

|-
| class="fc-route1" |'''第51話：シュナイゼルの仮面 Scenario 51: Schneizel's Mask'''
| class="fc-route2" |'''第51話：戦乱の王ピースクラフト Scenario 51: King of War Peacecraft'''

|-
|'''Victory Condition:''' Defeat the Damocles (Schneizel). '''Defeat Condition:''' Mothership is defeated. '''SR Point:''' Within 4 turns, defeat Lancelot Albion, Sutherland Sieg, Avalon, Mordred, and Tristan, then defeat Damocles. '''Secret Requirements:''' '''Unit Acquisition:'''

|'''Victory Condition:''' Defeat all enemies. Defeat Regnant (Louise) or Susanowo (Mr. Bushido). Defeat Arietis (Aim). '''Defeat Condition:''' Mothership is defeated. Setsuna or Suzaku are defeated. '''SR Point:''' Defeat all Vayate and Mercurius units within 2 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Lancelot Albion (Suzaku)

|-
| class="fc-route1" |'''第52話：混迷の戦場 Scenario 52: Chaotic Battlefield'''
| class="fc-route2" |'''第52話：決死のエンドゲーム Scenario 52: Desperate Endgame'''

|-
|'''Victory Condition:''' Defeat all enemies. Defeat Regnant (Louise) and Susanowo (Mr. Bushido). Defeat Tallgeese II (Treize). '''Defeat Condition:''' Mothership is defeated. Setsuna or Heero are defeated. '''SR Point:''' Defeat 30 enemies within 2 turns. Do not allow any ESF or White Fang units to shoot each other down. '''Secret Requirements:''' '''Unit Acquisition:'''

|'''Victory Condition:''' Defeat all enemies. Defeat the Damocles (Schneizel). '''Defeat Condition:''' Mothership is defeated. Zero or Suzaku are defeated. '''SR Point:''' Defeat all initial enemies within 3 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Akatsuki Retainer Type -> Lancelot Frontier (C.C.)

|-
| class="fc-route1" |'''第53話：堕ちてくる月 Scenario 53: The Moon Falls'''
| class="fc-route2" |'''第53話：最後の勝利者 Scenario 53: The Final Victor'''

|-
|'''Victory Condition:''' Defeat Kou Mugann and Kyo Mugann. Defeat Kukyo Mugann. '''Defeat Condition:''' Mothership is defeated. Arc Gurren is defeated. Simon is defeated. '''SR Point:''' Within 3 turns, defeat all other enemies, then defeat Kou Mugann and Kyo Mugann. '''Secret Requirements:''' '''Unit Acquisition:'''
*Arc Gurren (Dayakka)
*Gurren Lagann gains the "Burst Spinning Punch" attack

|'''Victory Condition:''' Defeat the Libra. Defeat Gundam Epyon (Milliardo) and Tallgeese II (Treize). '''Defeat Condition:''' Mothership is defeated. Heero is defeated. '''SR Point:''' Within 4 turns, defeat all other enemies, then defeat Libra. Heero must move to the destination point before you defeat Libra. '''Secret Requirements:''' '''Unit Acquisition:'''

|-
| class="fc-route1" |'''第54話：絶望の世界 Scenario 54: World of Despair'''
| class="fc-route2" |'''第54話：決戦！！果てなき進化へ！ Scenario 54: Showdown!! Towards Endless Evolution!'''

|-
|'''Victory Condition:''' '''Part 1:''' Defeat the Cathedral Lazengann. Defeat Emperor Zuul and Emperor Muge. '''Part 2:''' Defeat the Anti-Gurren Lagann. '''Defeat Condition:''' '''Part 1:''' Mothership is defeated. Arc Gurren is defeated. Ryoma, Simon or Takeru are defeated. '''Part 2:''' Simon is defeated. '''SR Point:''' In the first part, defeat all enemies within 3 turns, saving the Cathedral Lazengann for last. '''Secret Requirements:''' '''Unit Acquisition:'''
*Arc Gurren (Dayakka)
*Tower -> Shin Getter Dragon (Go, Kei, Gai)
**Kei and Gai become sub-pilots only, and can only learn SP Up and SP Regen (their spent PP is refunded)
*Shin Getter 1 and Shin Getter Dragon gain the "Final Getter Tomahawk" and "Shin Shine Spark" combo attacks
*Virgola Glory (Setsuko)
**Gains +10 EN, +5 mobility, "High Stray Turret" and "Nautilus Carver" gain +400 DMG and "The Glory Star" gain +600 DMG
*Gunleon (Rand, Mel)
**Gains the "Pain Shouter" and "The Heat Crusher" attacks
*God Mars gains the "Super Final God Mars" attack and the "Final God Mars" attack is enhanced
*VF-25S Messiah AP (Ozma)
*RVF-25 Messiah SP (Luca)
**''Note:'' If the Frontier Fleet route wasn't chosen at scenario 4, Ozma and Luca will sortie with no upgrades.

|'''Victory Condition:''' Defeat all enemies. Defeat Cowen & Stinger within 5 turns of its appearance. '''Defeat Condition:''' Mothership is defeated. Ryoma is defeated. Five turns pass since Cowen & Stinger's arrival. '''SR Point:''' Have any one ally defeat 10 or more enemies before clearing the stage. '''Secret Requirements:''' '''Unit Acquisition:'''
*Tower -> Shin Getter Dragon (Go, Kei, Gai)
**Kei and Gai become sub-pilots only, and can only learn SP Up and SP Regen (their spent PP is refunded)
*Shin Getter 1 and Shin Getter Dragon gain the "Final Getter Tomahawk" and "Shin Shine Spark" combo attacks
*Virgola Glory (Setsuko)
**Gains +10 EN, +5 mobility, "High Stray Turret" and "Nautilus Carver" gain +400 DMG and "The Glory Star" gain +600 DMG
*Gunleon (Rand, Mel)
**Gains the "Pain Shouter" and "The Heat Crusher" attacks
*Terminus 303 SP (Holland)
*Tristan Divider (Gino)
*Mordred (Anya)
*VF-25S Messiah AP (Ozma)
*RVF-25 Messiah SP (Luca)
**''Note:'' If the Frontier Fleet route wasn't chosen at scenario 4, Ozma and Luca will sortie with no upgrades.

|-
| class="fc-route1" |'''第55話：アナタノオト Scenario 55: Your Song (Anata no Oto)'''
| class="fc-route2" |'''第55話：復活の暗黒神 Scenario 55: The God of Darkness Revives'''

|-
|'''Victory Condition:''' Defeat Giant Ranka. Defeat the Battle Galaxy. Defeat the Vajra Queen (Grace). '''Defeat Condition:''' Mothership is defeated. Alto or Basara are defeated. '''SR Point:''' Within 3 turns, defeat 32 or more enemies, then defeat Giant Ranka. '''Secret Requirements:'''
*YF-29 Durandal
**Alto must have 70 or more kills before you begin this stage.
**If not playing New Game+, Alto must also have the highest kill count of all the Macross Frontier pilots (compared to Ozma, Mikhail, Luca, Klan, or Canaria; excluding Jeffrey).
**Shoot down both Ranka and Brera with Alto.
'''Unit Acquisition:'''
*Macross Quarter {Assault Mode] gains the "Macross Attack" attack
*VF-27y Lucifer (Brera)
*YF-29 Durandal (Alto)
*RVF-25 Messiah gains the "Ghost Judah System" attack
*VF-25F Messiah gains the Armored Pack parts

|'''Victory Condition:''' Defeat Kou Mugann and Kyo Mugann. Defeat Kukyo Mugann. Defeat the Cathedral Lazengann. '''Defeat Condition:''' Mothership is defeated. Arc Gurren is defeated. Simon is defeated. Cathedral Lazengann reaches the designated point. '''SR Point:''' Within 3 turns, defeat all other enemies, then defeat Kou Mugann and Kyo Mugann. Defeating Shurouga (Asakim) is optional. '''Secret Requirements:''' '''Unit Acquisition:'''
*Arc Gurren (Dayakka)
*Gurren Lagann gains the "Burst Spinning Punch" attack

|-
| class="fc-route1" |'''第56話： BEYOND Scenario 56: BEYOND'''
| class="fc-route2" |'''第56話：奈落への螺旋 Scenario 56: Spiral of Hell'''

|-
|'''Victory Condition:''' Defeat the Regnant (Louise). Defeat Gadessa and Garazzo. Defeat the Reborns Gundam (Ribbons). '''Defeat Condition:''' Mothership is defeated. Setsuna or Tieria are defeated. '''SR Point:''' Within 3 turns, defeat all other enemies, then defeat Regnant. Defeating Arche Gundam (Ali-Al Saachez) is optional. '''Secret Requirements:''' '''Unit Acquisition:'''
*Gundam Epyon (Milliardo)
*Lancelot Albion (Suzaku)
*Setsuna gains the "Innovator" special skill

|'''Victory Condition:''' '''Part 1:''' Defeat all enemies. Defeat Emperor Zuul and Emperor Muge. '''Part 2:''' Defeat the Anti-Gurren Lagann. '''Defeat Condition:''' '''Part 1:''' Mothership is defeated. Arc Gurren is defeated. Simon or Takeru are defeated. '''Part 2:''' Simon is defeated. '''SR Point:''' Defeat all initial enemies within 3 player turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Arc Gurren (Dayakka)
*God Mars gains the "Super Final God Mars" attack and the "Final God Mars" attack is enhanced

|-
| class="fc-route1" |'''第57話：ゼロ・レクイエム Scenario 57: Zero Requiem'''
| class="fc-route2" |'''第57話：ネクスト・フロンティア Scenario 57: Next Frontier'''

|-
|'''Victory Condition:''' Defeat all enemies. Defeat the Arietis (Aim). Defeat the Damocles (Lelouch). '''Defeat Condition:''' Mothership is defeated. Heero is defeated. '''SR Point:''' Defeat Sutherland Sieg, Lancelot Frontier, Lancelot Albion, Susanowo, and Gundam Epyon all in the same turn. '''Secret Requirements:''' '''Unit Acquisition:'''
*Tristan Divider (Gino)
*Mordred (Anya)
*Shinkirou (Zero)
*Akatsuki Retainer Type -> Lancelot Frontier (C.C.)
*Lancelot Albion (Suzaku)
*Sutherland Sieg (Jeremiah)

|'''Victory Condition:''' Defeat Giant Ranka. Defeat the Battle Galaxy, Regnant (Louise) and Arche Gundam (Ali-Al Saachez). '''Defeat Condition:''' Mothership is defeated. Alto, Basara or Setsuna are defeated. '''SR Point:''' Within 3 turns, defeat 30 or more enemies, then defeat Giant Ranka. '''Secret Requirements:'''
*YF-29 Durandal
**Alto must have 70 or more kills by the end of this stage.
**If not playing New Game+, Alto must also have the highest kill count of all the Macross Frontier pilots (compared to Ozma, Mikhail, Luca, Klan, or Canaria; excluding Jeffrey).
**Shoot down both Ranka and Brera with Alto.
'''Unit Acquisition:'''
*00 Raiser reverts back to 00 Gundam and loses Saji until the end of the stage
*Macross Quarter [Assault Mode] gains the "Macross Attack" attack

|-
| class="fc-route1" |'''第58話：閃光！！進化の果て！ Scenario 58: Flash!! The End of Evolution!'''
| class="fc-route2" |'''第58話：革新 Scenario 58: Innovation'''

|-
|'''Victory Condition:''' Defeat all enemies. Defeat Cowen & Stinger. '''Defeat Condition:''' Mothership is defeated. Ryoma is defeated. '''SR Point:''' Defeat all initial enemies within 3 turns. '''Secret Requirements:''' '''Unit Acquisition:'''

|'''Victory Condition:''' Defeat Gadessa and Garazzo. Defeat Reborns Gundam (Ribbons) and Vajra Queen (Grace). '''Defeat Condition:''' Mothership is defeated. Setsuna, Tieria, Heero, Alto or Basara are defeated. '''SR Point:''' Defeat Gadessa and Garazzo within 3 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Setsuna gains the "Innovator" special skill
*VF-27y Lucifer (Brera)
*YF-29 Durandal (Alto)
*RVF-25 Messiah gains the "Ghost Judah System" attack
*VF-25F Messiah gains the "Armored Pack" parts

|-
| class="fc-route1" |'''第59話：最後の聖王 Scenario 59: The Last Holy King'''
| class="fc-route2" |'''第59話：大逆のインサラウム Scenario 59: Insalaum's Betrayal'''

|-
|'''Note:''' Flying units in this map count as being in space terrain.
<hr>'''Victory Condition:''' Defeat the Palace Insalaum (Ambroan). Defeat the Exa ADAMON. Defeat Seiouki the Insa (Uther) and Pearl Fang (Marilyn). '''Defeat Condition:''' Mothership is defeated. '''SR Point:''' Within 3 turns, defeat all other enemies, then defeat Palace Insalaum. '''Secret Requirements:''' '''Unit Acquisition:'''

|'''Note:''' Flying units in this map count as being in space terrain.
<hr>'''Victory Condition:''' Defeat the Palace Insalaum (Ambroan). Defeat all enemies. '''Defeat Condition:''' Mothership is defeated. '''SR Point:''' Within 4 turns, defeat all other enemies, then defeat Palace Insalaum. '''Secret Requirements:''' '''Unit Acquisition:'''

|-
| class="fc-route1" |'''最終話：再世の未来 Final Scenario: Rebirth's Future'''
| class="fc-route2" |'''最終話：再世する次元 Final Scenario: Rebirth's Dimension'''

|-
|'''Note:''' Flying units in this map count as being in space terrain.
<hr>'''Victory Condition:''' Defeat the Shurouga (Asakim). Defeat Gaiou. '''Defeat Condition:''' Mothership is defeated. '''Secret Requirements:''' '''Unit Acquisition:'''

|'''Note:''' Flying units in this map count as being in space terrain.
<hr>'''Victory Condition:''' Defeat Seiouki the Insa (Uther). Defeat Gaiou. '''Defeat Condition:''' Mothership is defeated. '''Secret Requirements:'''
*Fight the Strongest Version of Gaiou
**When Gaiou's 2nd form appears, answer his question to Crowe with the bottom option, then bottom again to confirm. Gaiou will power up to level 85 (Normal) or 99 (Hard).
'''Unit Acquisition:'''
|}

Super Robot Wars/Alpha 3/Flow Chart

2023-07-12T18:15:46Z

KomodoWork: /* Stages 01 - 18 */

Units and Pilots in Black join your team. 
Units and Pilots in Orange are available for that stage, then leave. 
Units and Pilots in Blue have special requirements. Check the [[../Secrets|Secrets]] page for more details. 
Units and Pilots in Red previously joined, but from this point, are rendered unusable. Those lost permanently are marked so, while others rejoin later on. 
Information in Green are upgrades for units already in your party.

==Stages 01 - 18==
{| width="100%"
|- class="fc-route-h"
| width="25%" |'''Touma Route'''
| width="25%" |'''Kusuha Route'''
| width="25%" |'''Cobray Route'''
| width="25%" |'''Selena Route'''

|-
| class="fc-route1" |'''第１話：闘志、炎に燃ゆる Scenario 1 - Within the Flames, Fighting Spirit Rises'''
| class="fc-route2" |'''第１話：出撃！鋼の龍虎 Scenario 1 - Launch! Dragon and Tiger of Steel'''
| class="fc-route3" |'''第１話：虚空からの転生 Scenario 1 - Reincarnated from the Void'''
| class="fc-route4" |'''第１話：シークレット・ミッション Scenario 1 - Secret Mission'''

|-
|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Any allied unit is defeated '''Skill Point:''' Defeat all enemies in 3 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Raioh (Touma)
*GaoGaiGar (Guy)
*Goldymarg (Goldymarg)
*HyoRyu (HyoRyu)
*EnRyu (EnRyu)

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Any allied unit is defeated '''Skill Point:''' Defeat all enemies in 2 turns '''Secret Requirements:'''
*Bullet
**You must be playing as Kusuha to recruit Bullet.
'''Unit Acquisition:'''
*Gouryu Kai (Kusuha)
*Raikou Kai (Bullet)
*Mazinkaiser (Kouji)
*Diana A (Sayaka)
*Shin Getter (Ryoma, Hayato, Benkei)
*Lady Command (Michiru)

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' (1) Werkbau is defeated; (2) Werkbau is defeated, ally battleship is defeated '''Skill Point:''' Defeat all enemies in 5 turns after enemy reinforcements show up '''Secret Requirements:'''
*Arado and Seolla
**You must be playing as Cobray to recruit Arado and Seolla.
'''Unit Acquisition:'''
*Werkbau (Cobray)
*Nu Gundam (Amuro)
*Ra Cailum (Bright, Torres)
*MP Nu Gundam (Kayra)
*Jegan (Katz)
*Incom & Funnel parts for MP Nu Gundam

|'''Victory Condition:''' (1) All enemies except Salamis Kai shot down; (2) R-Gun Powered shot down '''Defeat Condition:''' (1) Selena shot down, Salamis Kai shot down; (2) Selena shot down '''Skill Point:''' Defeat all enemies except the Salamis Kai in 4 turns '''Secret Requirements:'''
*Ibis and Slay
**You must be playing as Selena to recruit Ibis and Slay.
'''Unit Acquisition:'''
*AS Soleares (Selena, Elma)
*Albion (Synapse, Paserov)
*GP03 Dendrobium (Kou)
*GM Cannon II (Keith)
*GM Custom (Burning)
*GM Custom (Bate)
*GM Custom (Monsha)
*GM Cannon II (Adel)
*Zeta Gundam (Kamille)
*Re-GZ BWS (Four)
*Methuss (Fa)
*Super Gundam (Emma)
*Armed Fortress Orchis parts for Gundam Stamen
*G Defensor parts for Gundam Mk-II

|-
| class="fc-route1" |'''第２話: さらばGGG、さらば勇者 Scenario 2 - Farewell, GGG! Farewell, Braves!'''
| class="fc-route2" |'''第２話: 新たなる侵略者！立ち上がれV Scenario 2 - New Invaders! Rise Up, V!'''
| class="fc-route3" |'''第２話: 血の狼煙 Scenario 2 - Beacon Fire of Blood'''
| class="fc-route4" |'''第２話: フラッシュ・デイ Scenario 2 - Flash Day'''

|-
|'''Victory Condition:''' Defeat all enemies; Defeat ZX-01 '''Defeat Condition:''' Any allied unit is defeated '''Skill Point:''' Defeat the 4 Zonders in 2 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*GaoGaiGar (Guy)
*J-Der (J, Tomoro)
*Great Mazinger (Tetsuya)
*Venus A (Jun)
*Boss Borot (Boss, Nuke, Mucha)
*Kotetsu Jeeg (Jeeg)
*Big Shooter (Miwa)

|'''Victory Condition:''' (1) Defeat all enemies, (2) Defeat Dangel '''Defeat Condition:''' (1) Hyouma defeated (2) Any Allied Unit is defeated '''Skill Point:''' Defeat all enemies in 3 turns, do not lose any Federation Army squads '''Secret Requirements:''' '''Unit Acquisition:'''
*Combattler V (Hyoma, Juzo, Daisaku, Chizuru, Kosuke)
*Jegan (Federation Soldier) x 3

|'''Victory Condition:''' (1) Defeat the Magellan Kai-class Battleship (2) Defeat the Magellan Kai-class Battleship and Nuclear Missiles '''Defeat Condition:''' (1) Any ally unit is defeated (2) Nuclear Missiles reach the marked area on the map '''Skill Point:''' Defeat the enemy missiles and battleship in 7 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Clop-class (Federation Captain)
*Wildfalken (Seolla)
*MP Nu Gundam (Cobray)
*ZZ Gundam (Judau)
*Re-GZ BWS (Roux)
*Albion (Synapse, Paserov)
*GP03 Dendrobium (Kou)
*GM Cannon II (Keith)
*GM Custom (Burning)
*GM Custom (Bate)
*GM Custom (Monsha)
*GM Cannon II (Adel)
*Zeta Gundam (Kamille)
*Re-GZ BWS (Four)
*Methuss (Fa)
*Super Gundam (Emma)
*Armed Fortress Orchis parts for Gundam Stamen
*G Defensor Parts for Gundam Mk-II

|'''Victory Condition:''' Defeat any enemy battleship '''Defeat Condition:''' (1) Allied battleship is defeated; (2) Allied battleship is defeated, Selena is defeated '''Skill Point:''' Defeat the enemy battleship in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*ZZ Gundam (Judau)
*Re-GZ BWS (Roux)
*Nu Gundam (Amuro)
*Ra Cailum (Bright)
*Jegan (Katz)
*MP Nu Gundam (Keyra)
*AS Soleares (Selena, Elma)
*Incom & Funnel parts for MP Nu Gundam

|-
| colspan="4" class="fc-std-sc" |'''第３話: 逆襲！機界31原種 Scenario 3 - Counterattack! The 31 Machine Primevals!'''

|-
| colspan="4" |'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' (1) Ally battleship is defeated, One of the Machine Primevals reaches the edge of the map; (2) Ally battleship is defeated, One of the Machine Primevals reaches the edge of the map, J is defeated '''Skill Point:''' Defeat all enemies in 6 turns '''Secret Requirements:''' '''Unit Acquisition (Touma & Kusuha):'''
*J-Ark (J, Tomoro)
*Nu Gundam (Amuro)
*Ra Cailum (Bright, Torres)
*Jegan (Katz)
*MP Nu Gundam (Keyra)
*Albion (Synapse, Paserov)
*GP03 Dendrobium (Kou)
*GM Cannon II (Keith)
*GM Custom (Burning)
*GM Custom (Bate)
*GM Custom (Monsha)
*GM Cannon II (Adel)
*Zeta Gundam (Kamille)
*Re-GZ BWS (Four)
*Methuss (Fa)
*Super Gundam (Emma)
*Incom & Funnel parts for MP Nu Gundam
*Armed Fortress Orchis parts for Gundam Stamen
*G Defensor Parts for Gundam Mk-II
'''Unit Acquisition (Cobray & Selena):'''
*J-Ark (J, Tomoro)
*Mazinkaiser (Kouji)
*Diana A (Sayaka)
*Great Mazinger (Tetsuya)
*Venus A (Jun)
*Combattler V (Hyoma, Juzo, Daisaku, Chizuru, Kosuke)
*Koutetsu Jeeg (Jeeg)
*Big Shooter (Miwa)
*Shin Getter (Ryoma, Hayato, Benkei)
*Lady Command (Michiru)

|-
| colspan="4" class="fc-std-sc" |'''第４話：地獄門、開く Scenario 4 - The Gates of Hell Open'''

|-
| colspan="4" |'''Victory Condition:'''
*1st Part: Allied Battleship reaches the escape point in 5 turns, All Enemies are defeated in 5 turns
*2nd Part: Defeat all enemies
'''Defeat Condition:'''
*1st Part: Allied Battleship is defeated, Turn 6 starts
*2nd Part: SRX is defeated
'''Skill Point:''' Defeat all enemies in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*SRX (Damaged) (Ryuusei, Rai, Aya)

|-
| colspan="4" class="fc-std-sc" |'''第５話: 地球圏絶対防御線 Scenario 5 - The Earth Sphere’s Absolute Defense Line'''

|-
| colspan="4" |'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' (1) Ally battleship is defeated (2) Any allied unit is defeated '''Skill Point:''' Clear the stage in 6 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Moebius Zero (Mwu)
*All Char's Counter Attack, Stardust Memory, and Zeta Gundam units are lost <ul><li>Nu Gundam(Amuro)</li><li>Ra Cailum (Bright, Torres)</li><li>MP Nu Gundam (Keyra)</li><li>Albion (Synapse, Paserov)</li><li>GP03 Dendrobium (Kou)</li><li>GM Cannon II (Keith)</li><li>GM Custom (Burning)</li><li>GM Custom (Bate)</li><li>GM Custom (Monsha)</li><li>GM Cannon II (Adel)</li><li>Zeta Gundam (Kamille)</li><li>Re-GZ BWS (Four)</li><li>Methuss (Fa)</li><li>Super Gundam (Emma)</li><li>Jegan (Katz)</li></ul>

|- class="fc-route-h"
|'''Touma Route''' Great Mazinger, Venus A, Boss Borot Steel Jeeg, Big Shooter
|'''Kusuha Route''' Getter Robo G, Lady Command Mazinger Z, Diana A Combattler V
|'''Cobray Route''' ZZ Gundam, ReGZ (BWS) Moebius Zero
|'''Selena Route'''
|-
| class="fc-route1" |'''第６話：平和、遥か遠く Scenario 6 - A Faraway Peace'''
| class="fc-route2" |'''第６話：北米戦線、異常アリ Scenario 6 - Abnormalities on the North American Front'''
| class="fc-route3" |'''第６話：GUNDAM出撃 Scenario 6 - Gundam, Sortie'''
| class="fc-route4" |'''第６話：ザ・ビギニング Scenario 6 - The Beginning'''

|-
|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Any ally is defeated '''Skill Point:''' Defeat all enemies in 5 turns; Defeat the Yamata no Orochi last '''Secret Requirements:''' '''Unit Acquisition:'''
*GaiGar (Gai)
*Mic Sounders XIII (Mic Sounders XIII)

|'''Victory Condition:''' (1) Ally reaches the designated area; (2) Defeat all enemies '''Defeat Condition:''' Any ally defeated '''Skill Point:''' Reach target location without engaging in combat '''Secret Requirements:''' '''Unit Acquisition:'''
*Mazinkaiser → Mazinger Z (Kouji)
*Shin Getter Robo → Getter Robo G (Ryoma, Hayato, Benkei) 
*Dancouga (Shinobu, Sara, Masato, Ryo)

|'''Victory Condition:'''
*1st Part: Sigu is defeated, Vesalius is defeated
*2nd Part: Defeat all enemies 
'''Defeat Condition:'''
*1st Part: Any ally is defeated
*2nd Part: Any ally is defeated 
'''Skill Point:''' Accomplish either objective in 4 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Clop Class Battleship (Federation Officer)
*Wing Gundam Zero (Heero)
*Gundam Deathscythe Hell (Duo)
*Gundam Sandrock Kai (Quatre)
*Taurus (Hilde)
*Strike Gundam (Kira)

|'''Victory Condition:''' (1) AS Soleares reaches the designated point in 4 turns; (2) Defeat all enemies '''Defeat Condition:''' (1) Begin turn 5 without meeting victory conditions, Any ally is defeated; (2) Any ally is defeated '''Skill Point:''' Defeat all enemies in 4 turns and get the AS Soleares to the target square '''Secret Requirements:''' '''Unit Acquisition:'''
*CGUE (Rau)
*GINN (ZAFT Soldier) x 2
*Vesarius (Ades)

|-
| class="fc-route1" |'''第７話：燃えろ宙！妖花フローラの挑戦 Scenario 7 - Space Burns! The Enchanting Flora’s Challenge!'''
| class="fc-route2" |'''第７話：怒りの獣、野生の咆哮 Scenario 7 - The Wild Roar of the Raging Beast'''
| class="fc-route3" |'''第７話：崩壊の大地 Scenario 7 - Collapsing Land'''
| class="fc-route4" |'''第７話：ワンズ・ジャスティス Scenario 7 - One’s Own Justice'''

|-
|'''Victory Condition:''' 
*1st Part: Defeat all enemies
*2nd Part: Defeat all enemies
'''Defeat Condition:''' 
*1st Part: Any ally defeated
*2nd Part: Any ally defeated
'''Skill Point:''' Defeat all enemies in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*AnRyu (AnRyu)
*KouRyu (KouRyu)

|'''Victory Condition:''' (1) Defeat all enemies; (2) Defeat Dangel '''Defeat Condition:''' Any ally is defeated '''Skill Point:''' Defeat all Zubanzas, Boazan Flying Saucers, and Red Baloms within 4 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Black Wing (Alan)

|'''Victory Condition:''' (1) Defeat all enemies; (2) Archangel reaches the designated point, Defeat all enemies '''Defeat Condition:''' (1) Mwu is defeated; (2) Ally battleship is defeated, Kira or Mwu are defeated '''Skill Point:''' Defeat all enemies in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Strike Gundam (Kira)
*Archangel (Murrue, Natarle)
*Aile, Sword and Launcher Striker packs for Strike Gundam

|'''Victory Condition:''' Any ally reaches the designated point '''Defeat Condition:''' Any ally is defeated '''Skill Point:''' Defeat all enemies in 5 turns and get an allied unit to the target square '''Secret Requirements:''' '''Unit Acquisition:'''
*Gundam Heavyarms Kai (Trowa)
*Altron Gundam (Wufei)
*CGuE (Rau)
*Vesarius (Ades)
*Aegis Gundam (Athrun)
*Blitz Gundam (Nicol)
*Buster Gundam (Dearka)
*Duel Gundam (Yzak)

|-
| class="fc-route1" |'''第８話：立ち上がれ！勇気ある者達 Scenario 8 - Stand Up, People of Courage!'''
| class="fc-route2" |'''第８話：輝け！不死身の勇者 Scenario 8 - Shine, Undying Hero!'''
| class="fc-route3" |'''第８話：誘う声 Scenario 8 - An Inviting Voice'''
| class="fc-route4" |'''第８話：インビジブル・イントルーダー Scenario 8 - Invisible Intruder'''

|-
|'''Victory Condition:''' (1) Defeat all enemies; (2) ZX-02 is defeated '''Defeat Condition:''' (1) Any ally is defeated; (2) Gai is defeated, J is defeated '''Skill Point:''' Defeat all enemies in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*GaiGar → GaoGaiGar
*Mic Sounders XIII gains "Disc P", "Disc M", and "Disc X" attacks
*Goldymarg (Goldymarg)
*HyoRyu (HyoRyu)
*EnRyu (EnRyu)
*Big Volfogg (Big Volfogg)

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' (1) Any ally is defeated; (2) Akira is defeated '''Skill Point:''' Defeat the Bramble (retreats at 4000HP (E) / 6000HP (N) / 8000HP (H)) '''Secret Requirements:''' '''Unit Acquisition:'''
*Raideen (Akira)
*Bluegar (Jinguji, Mari)

|'''Victory Condition:'''
*1st Part: (1) Vesalius is defeated; (2) Defeat all enemies
*2nd Part: (1) Defeat all enemies; (2) Defeat all enemies except Valk Baal 
'''Defeat Condition:'''
*1st Part: Ally battleship is defeated, Seolla or Cobray are defeated
*2nd Part: Any ally is defeated 
'''Skill Point:''' Defeat Aegis, Duel, Buster, and Blitz Gundams in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Zeta Gundam (Kamille)
*Re-GZ BWS (Four)
*Methuss (Fa)
*Super Gundam (Emma)
*Ra Cailum (Bright, Torres)
*MP Nu Gundam (Cobray)
*Werkbau (Cobray)
*G Defensor parts for Gundam Mk-II

|'''Victory Condition:''' Reach turn 6 '''Defeat Condition:''' Any ally is defeated '''Skill Point:''' Defeat all the Jegans '''Secret Requirements:''' '''Unit Acquisition:'''
*CGuE (Rau)
*Vesarius (Ades)
*Aegis Gundam (Athrun)
*Blitz Gundam (Nicol)
*Buster Gundam (Dearka)
*Duel Gundam (Yzak)

|-
| class="fc-route1" |'''第９話：内なる修羅 Scenario 9 - Demons of War Within'''
| class="fc-route2" |'''第９話：再会！ニューヨーク解放戦 Scenario 9 - Reunion! The Battle to Retake New York'''
| class="fc-route3" |'''第９話：正義の在処 Scenario 9 - Where Justice Can Be Found'''
| class="fc-route4" |'''第９話：アベンジャー Scenario 9 - Avenger'''

|-
|'''Victory Condition:''' (1) Defeat all enemies; (2) Defeat Raioh '''Defeat Condition:''' (1) Any ally defeated; (2) Sanger is defeated '''Skill Point:''' Defeat the Bramble in 4 turns (retreats at 4000HP (E) / 6000HP (N) / 8000HP (H)) '''Secret Requirements:''' '''Unit Acquisition:'''
*Dygenguar (Sanger)
*Huckebein Mk-III Trombe (Ratsel)
*Raideen (Akira)
*Bluegar (Jingunji, Mari)
*Mazinger Z (Kouji)
**Mazinger Z (Kouji) and Great Mazinger (Tetsuya) gain the "Double Mazinger Blade" and "Double Burning Fire" combination attacks
*Diana A (Sayaka)
*Getter Robo G (Ryoma, Hayato, Benkei)
*Lady Command (Michiru)
*Combattler V (Hyoma, Juzo, Daisaku, Chizuru, Kosuke)

|'''Victory Condition:''' (1) Defeat all enemies; (2) Dancouga reaches the designated point; (3) Defeated Deathgaia, Dangel, and Warchamedes '''Defeat Condition:''' (1) Shinobu, Kusuha, or Bullet are defeated; (2) Shinobu, Kusuha, Bullet, or Alan are defeated; (3) Alan is defeated '''Skill Point:''' Clear the map in 8 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Black Wing (Alan)
*Dygenguar (Sanger)
*Huckebein Mk-III Trombe (Ratsel)

|'''Victory Condition:''' (1) Vesalius is defeated; Reduce the Muge Battleship under 2000 HP before it reaches the edge of the map '''Defeat Condition:''' (1) Ally battleship is defeated; (2) Muge Battleship reaches the western edge of the map '''Skill Point:''' Defeat all enemies before reducing the Muge Mothership's HP below 2000 or defeating it '''Secret Requirements:''' '''Unit Acquisition:'''

|'''Victory Condition:''' (1) Reduce the Archangel's HP to 50% or less, Defeat all enemies besides the Archangel; (2) Reduce the Varuch Ishar to 4000 HP or less. '''Defeat Condition:''' Any ally is defeated '''Skill Point:''' Defeat the Varuch Ishar (flees at 4000 HP) '''Secret Requirements:''' '''Unit Acquisition:'''
*CGuE (Rau)
*Vesarius (Ades)
*Aegis Gundam (Athrun)
*Blitz Gundam (Nicol)
*Buster Gundam (Dearka)
*Duel Gundam (Yzak)

|-
| class="fc-route1" |'''第１０話：激震の地底帝国 Scenario 10 - Tremors in the Underground Empire'''
| class="fc-route2" |'''第１０話：龍を喰らうもの Scenario 10 - That Which Devours the Dragon'''
| class="fc-route3" |'''第１０話：消えていく光 Scenario 10 - The Fading Light'''
| class="fc-route4" |'''第１０話：グッバイ・フレンズ Scenario 10 - Goodbye, Friends'''

|-
|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' All allies defeated, Science Fortress Lab destroyed '''Skill Point:''' Clear the map without the Science Fortress Lab taking damage '''Secret Requirements:''' '''Unit Acquisition:'''
*Raioh loses the "System LIOH" ability
*Raioh gains the "Rising Meteor" attack
*Dygenguar (Sanger)
*Huckebein Mk-III Trombe (Ratsel)

|'''Victory Condition:''' (1) Sanger is defeated; (2)(3) Defeat all enemies; (4)(5) ZX-02 is defeated '''Defeat Condition:''' (1) Bullet is defeated; (2) Sanger or Rastel are defeated; (3) Any ally is defeated; (4) Guy, Sanger, or Rastel are defeated; (5) Guy, J, Sanger, or Rastel are defeated '''Skill Point:''' Reduce Shin RyuOuKi to below 10000 HP within 3 turns of its arrival '''Secret Requirements:''' '''Unit Acquisition:'''
*Dygenguar (Sanger)
*Huckebein Mk-III Trombe (Ratsel)
*GaiGar (Guy)
*GaoGaiGar (Guy)
*Mic Sounders XIII (Mic Sounders XIII)
*Goldymarg (Goldymarg)
*HyoRyu (HyoRyu)
*EnRyu (Enryu)
*Volfogg (Volfogg)
*Great Mazinger (Tetsuya)
*Venus A (Jun)
*Boss Borot (Boss, Mucha, Nuke)
*Kotetsu Jeeg (Jeeg)
*Big Shooter (Miwa)
*Stealth Gao II parts for GaoGaiGar
*Gunbot parts for Volfogg

|'''Victory Condition:''' (1) Reduce the Blitz Gundam to under 7000HP; (2) The Gamow is defeated; (3) The Gamow is defeated and Imperial Guard are defeated '''Defeat Condition:''' (1)(2) Any ally is defeated; (3) Ally battleship is defeated '''Skill Point:''' Defeat the Gamow (retreats at 4000HP (E) / 6000HP (N) / 8000HP (H)) '''Secret Requirements:''' '''Unit Acquisition:'''
*Qubeley Mk-II (Puru)
*Qubeley Mk-II (Puru Two)
*Hyaku Shiki (Beecha)
*Gundam Mk-II (Elle)
*Jegan (Mondo)
*Megarider (Iino)
*YF-19 (Isamu)
*YF-21 (Guld)

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' (1) Any ally is defeated; (2) Ally battleship is defeated; (3) Ally battleship is defeated, Isamu or Guld are defeated '''Skill Point:''' Clear the map in 6 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Zeta Gundam (Kamille)
*Methuss (Fa)
*ReGZ (Four)
*Super Gundam (Emma)
*Archangel (Murrue, Natarle)
*Strike Gundam (Kira)
*Moebius Zero (Mwu)
*Aile, Sword, and Launcher Striker packs for Strike Gundam
*Wing Gundam Zero (Heero)
*Gundam Deathscythe Hell (Duo)
*Gundam Sandrock Kai (Quatre)
*Taurus (Hilde)
*ZZ Gundam (Judau)
*ReGZ BWS (Roux)
*Qubeley Mk-II (Puru)
*Qubeley Mk-II (Puru Two)
*Hyaku Shiki (Beecha)
*Gundam Mk-II (Elle)
*Jegan (Mondo)
*Megarider (Iino)
*YF-19 (Isamu)
*YF-21 (Guld)

|-
| class="fc-route1" |'''第１１話：戦場の邂合、そして決別 Scenario 11 - An Battlefield Encounter, and Then a Departure'''
| class="fc-route2" |'''第１１話：新たなる人類 Scenario 11 - A New Mankind'''
| class="fc-route3" |'''第１１話：君と戦場で Scenario 11 - On the Battlefield with You'''
| class="fc-route4" |'''第１１話：パワー・ジャンクション Scenario 11 - Power Junction'''

|-
|'''Victory Condition:''' (1) Defeat all enemies; (2) Defeat Vesalius '''Defeat Condition:''' Ally battleship is defeated, Kira or Mwu are defeated '''Skill Point:''' Defeat all enemies in 7 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Archangel (Murrue, Natarle)
*Strike Gundam (Kira)
*Moebius Zero (Mwu)
*Stealth Gao II Parts for GaoGaiGar
*Aile, Sword, and Launcher Striker packs for Strike Gundam

|'''Victory Condition:''' (1) Defeat all enemies; (2) Vesalius is defeated '''Defeat Condition:''' (1) Ally battleship is defeated, Kira or Mwu are defeated; (2) Ally battleship is defeated '''Skill Point:''' Defeat all enemies in 7 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Strike Gundam (Kira)
*Moebius Zero (Mwu)
*Archangel (Murrue, Natarle)
*YF-19 (Isamu)
*YF-21 (Guld)
*Aile, Sword, and Launcher Striker packs for Strike Gundam

|'''Victory Condition:''' (1) Defeat all enemies (2) ZX-02 is defeated '''Defeat Condition:''' (1) Kira is defeated; (2) Any ally is defeated '''Skill Point:''' Defeat all enemies in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Wildwurger (Arado)
*Great Mazinger (Tetsuya)
*Venus A (Jun)
*Boss Borot (Boss)
*Dancouga (Shinobu, Sarah, Masato, Ryo)
*Raideen (Akira)
*Bluegar (Jingunji)
*Mazinger Z (Kouji)
*Diana A (Sayaka)
*Getter Robo G (Ryoma, Hayato, Benkei)
*Lady Command (Michiru)
*Star Gaogaigar (Gai)
*Goldymarg (Goldymarg)
*Mic Sounders the 13th (Mic)
*Hyoryu (Hyoryu)
*Enryu (Enryu
*Big Volfogg (Volfogg)

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Defeat all enemies in 7 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Ra Cailum (Bright, Torres)
*Great Mazinger (Tetsuya)
*Venus A (Jun)
*Boss Borot (Boss)
*Dancouga (Shinobu, Sarah, Masato, Ryo)
*Raideen (Akira)
*Bluegar (Jingunji)
*Mazinger Z (Kouji)
*Diana A (Sayaka)
*Getter Robo G (Ryoma, Hayato, Benkei)
*Lady Command (Michiru)
*Star Gaogaigar (Gai)
*Goldymarg (Goldymarg)
*Mic Sounders the 13th (Mic)
*Hyoryu (Hyoryu)
*Enryu (Enryu
*Big Volfogg (Volfogg)

|-
| class="fc-route1" |'''第１２話：守るべきモノ Scenario 12 - What You Must Protect'''
| class="fc-route2" |'''第１２話：別れの宇宙 Scenario 12 - Farewells in Space'''
| class="fc-route3" |'''第１２話：ディーンの火 Scenario 12 - The Flames of Deen'''
| class="fc-route4" |'''第１２話：コンクルージョン Scenario 12 - Conclusion'''

|-
|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' All enemies defeated '''Skill Point:''' Defeat all enemies in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Wing Gundam Zero (Heero)
*Gundam Deathscythe Hell (Duo)
*Gundam Sandrock Kai (Quatre)
*Gundam Heavyarms Kai (Trowa)
*Altron Gundam (Wufei)
*Taurus (Hilde)
*Zeta Gundam (Kamille)
*Re-GZ BWS (Four)
*Methuss (Fa)
*Gundam Mk-II (Emma)
*ZZ Gundam (Judau)
*Qubeley Mk-II (Puru)
*Qubeley Mk-II (Puru Two)
*Hyaku Shiki (Beecha)
*Gundam Mk-II (Elle)
*Jegan (Mondo)
*Megarider (Iino)
*YF-19 (Isamu) (After stage)
*YF-21 (Guld) (After stage)
*G Defensor parts for Gundam Mk-II

|'''Victory Condition:''' (1) Defeat all enemies; (2) Defeat Shin RyoOhKi; (3) Defeat the Imperial Guard '''Defeat Condition:''' (1)(2) Any ally is defeated; (3) Ally battleship is defeated '''Skill Point:''' Defeat Shin RyuOhKi before Victory Conditions are met '''Secret Requirements:''' '''Unit Acquisition:'''
*Wing Gundam Zero (Heero)
*Gundam Deathscythe Hell (Duo)
*Gundam Sandrock Kai (Quatre)
*Gundam Heavyarms Kai (Trowa)
*Altron Gundam (Wufei)
*Taurus (Hilde)
*Zeta Gundam (Kamille)
*Re-GZ BWS (Four)
*Methuss (Fa)
*Gundam Mk-II (Emma)
*ZZ Gundam (Judau)
*Qubeley Mk-II (Puru)
*Qubeley Mk-II (Puru Two)
*Hyaku Shiki (Beecha)
*Gundam Mk-II (Elle)
*Jegan (Mondo)
*Megarider (Iino)
*G Defensor parts for Gundam Mk-II

|'''Victory Condition:''' (1) Bramble, Magnum, and Zangaioh are defeated; (2) Defeat all enemies; (3) Defeat Valk Baal '''Defeat Condition:''' (1) Ally battleship is defeated, Arado is defeated; (2) Cobray, Arado or Seolla are defeated; (3) Cobray, Viletta, Sanger, or Rastel are defeated '''Skill Point:''' Clear the map in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Werkbau gains the "Axion Buster" attack
*Gundam Heavyarms Kai (Trowa)
*Altron Gundam (Wufei)
*Dygenguar (Sanger)
*Huckebein Mk-III Trombe (Ratsel)
*R-GUN Powered (Viletta)

|'''Victory Condition:''' (1)(2) ZX-08 is defeated; (3) Varuch Ishar is defeated '''Defeat Condition:''' (1) Ally battleship is defeated, (2) Ally battleship is defeated, J is defeated; (3) Ally battleships is defeated, Selena, Viletta, Sanger, or Rastel are defeated '''Skill Point:''' Defeat ZX-02 in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*J-ARK (J, Tomoro)
*R-GUN Powered (Viletta)
*Dygenguar (Sanger)
*Huckebein Mk-III Trombe (Ratsel)
*Vegalion (Slay)

|-
| colspan="4" class="fc-std-sc" |'''第１３話：もう一度、自らの足で Scenario 13 - Once Again, On Your Feet'''

|-
| colspan="4" |'''Victory Condition:''' ZX-06 is defeated '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Clear the map in 6 turns; Defeat all other enemies before ZX-06 '''Secret Requirements:''' '''Unit Acquisition:'''
*Evangelion Unit 0 Custom (Rei)
*Evangelion Unit 1 (Shinji)
*Evangelion Unit 2 (Asuka)

|-
| colspan="4" class="fc-std-sc" |'''第１４話：オペレーション・ハルパー Scenario 14 - Operation Harper'''

|-
| colspan="4" |'''Victory Condition:''' Reduce Hermoz Ehad's HP to below 120000HP (E) / 90000HP (N) / 80000HP (H) '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Achieve the victory condition in 7 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*HyoRyu (HyoRyu)
*EnRyu (EnRyu)

|-
| colspan="4" class="fc-std-sc" |'''第１５話：遥かなる凱歌 Scenario 15 - A Faroff Victory Song'''

|-
| colspan="4" |'''Victory Condition:''' Defeat the Combine Primeval '''Defeat Condition:''' Ally Battleship is defeated, J is defeated '''Skill Point:''' Defeat all enemies in 7 turns, leaving the combined Primeval for last '''Secret Requirements:''' '''Unit Acquisition:'''
*J-Ark (J, Tomoro)
*ALL units are unavailable until clearing Scenario 18

|-
| colspan="4" class="fc-std-sc" |'''第１６話：導かれる魂、銀河で Scenario 16 - Souls Guided by the Galaxy'''

|-
| colspan="4" |'''Victory Condition:'''
*1st Part: Defeat all enemies
*2nd Part: Defeat all enemies
'''Defeat Condition:'''
*1st Part: Ideon is defeated
*2nd Part: Any ally is defeated
'''Skill Point:''' Defeat all enemies in 4 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Ideon (Cosmo, Kasha, Bess → Moera)
*VF-17S Nightmare (Kinryu)
*VF-17D Nightmare (Gamlin)
*VF-17D Nightmare (Docker)
*Battle 7 (Max, Exedore, Miho, Sally)
*Soloship (Bess)

|-
| colspan="4" class="fc-std-sc" |'''第１７話：ディスコード・ハーモニー Scenario 17 - Discord / Harmony'''

|-
| colspan="4" |'''Victory Condition:''' (1)(2) Defeat the Zig Mac; (3) Defeat FZ-109F Elgarthorn '''Defeat Condition:''' (1) Any ally is defeated; (2) Any ally is defeated, Zig Mac moves next to the Soloship (3) '''Skill Point:''' Meet victory the condition in 4 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Battle 7 can now transform into "Enhanced Attack Mode"
*VF-17D Nightmare (Docker)

|-
| colspan="4" class="fc-std-sc" |'''第１８話：銀河流浪 Scenario 18 - Galactic Wandering'''

|-
| colspan="4" |'''Victory Condition:'''
*1st Part: Defeat FZ-109F Elgarthorn
*2nd Part: Defeat Zig Mac
'''Defeat Condition:'''
*1st Part: Any ally is defeated
*2nd Part: Any ally is defeated
'''Skill Point:''' Meet victory conditions in 3 turns '''Secret Requirements:'''
*Duel Gundam
**Take the Earth Route
*VF-1J S Valkyrie
**Take the Earth Route
*LaGOWE
**Take the Earth Route
'''Unit Acquisition:'''
*VF-17D Nightmare (Physica)
*VF-17S (Kinryu), VF-17D (Gamlin), and VF-17D (Physica) gain the "Diamond Force Attack" combination Attack
*Ideon gains the "Omnidirectional Missile" attack
*All Ideon and Macross 7 units are lost <ul><li>Ideon (Cosmo, Kasha, Moera)</li><li>Soloship (Bess)</li><li>Battle 7 (Max, Exedore, Miho, Sally)</li><li>VF-17S Nightmare (Kinryu)</li><li>VF-17D Nightmare (Physica)</li><li>VF-17D Nightmare (Gamlin)</li>

|}
 

==Stages 19 - 33==
{| width="100%"
|- class="fc-route-h"
| width="50%" |'''Descend to Earth''' Gundam 0083 Gundam Z ZZ Gundam Char's CounterAttack Gundam Wing Gundam SEED Macross 7 Macross Plus Evangelion
| width="50%" |'''Mount a Lunar offensive''' GaoGaiGar Ideon Mazinger (Z, Great) Getter Robo Steel Jeeg Combattler V Gaiking Raideen Dancouga GoShogun

|-
| class="fc-route1" |'''第１９話：宇宙に降る星 Scenario 19 - Stars Falling in Space'''
| class="fc-route3" |'''第１９話：悪夢への招待状 Scenario 19 - A Written Invitation to a Nightmare'''

|-
|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated, Kira is defeated '''Skill Point:''' Destroy all enemies in 6 turns '''Secret Requirements:'''
*Duel Gundam
**Destroy Yzak.
'''Unit Acquisition:'''
*Nu Gundam (Amuro)
*Jegan (Katz)
*MP Nu Gundam (Kayra)
*Incom and Fin Funnel parts for MP Nu Gundam
*Kira unlocks the SEED pilot skill
*Skygrasper
*Ra Cailum (Bright, Torres)

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Destroy the Muge battleship in 6 turns (retreats at 6000HP (E) / 8000HP (N) / 10000 HP (H)) '''Secret Requirements:''' 
'''Unit Acquisition:'''
*Daiku Maryu (Pete, Midori)
*Gaiking (Sanshiro)
*Skylar (Fan Li)
*Bazolar (Yamagatake)
*Nesser (Bunta)

|-
| class="fc-route1" |'''第２０話：強襲、砂漠の虎 Scenario 20 - Assault of the Desert Tiger'''
| class="fc-route3" |'''第２０話：異邦人達の帰還 Scenario 20 - The Foreigners Return'''

|-
|'''Victory Condition:''' Defeat the Lesseps '''Defeat Condition:''' Ally battleship is defeated, Kira is defeated '''Skill Point:''' Defeat the Lesseps in 6 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Kira unlocks the SEED pilot skill
*Albion (Synapse, Paserov)
*Gundam Stamen (Kou)
*GM Cannon II (Keith)
*GM Custom (Burning)
*GM Custom (Bate)
*GM Custom (Monsha)
*GM Cannon II (Adel)
*Gundam GP01fb
*Armed Base Orchis parts for Gundam Stamen

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Destroy Helmut's Muge battleship in 4 turns (retreats at 6000HP (E) / 8000HP (N) / 10000 HP(H)) '''Secret Requirements:''' '''Unit Acquisition:'''
*Ideon (Cosmo, Kasha, Moera)
*Ideon gains the "Ideon Sword" and "Ideon Sword (MAP)" attacks
*Soloship (Bess, Hatari)

|-
| class="fc-route1" |'''第２１話：プリティ・デビル Scenario 21 - Pretty Devil'''
| class="fc-route3" |'''第２１話：裏切りの代償 Scenario 21 - The Cost of Betrayal'''

|-
|'''Victory Condition:'''
*1st Part: Gigil's ship is defeated
*2nd Part: Gigil's ship is defeated 
'''Defeat Condition:'''
*1st Part: Any ally is defeated
*2nd Part: Basara is defeated
'''Skill Point:''' Destroy Gigil before he moves adjacent to Sivil '''Secret Requirements:'''
*LaGOWE
**Waltfeld and Dacosta must both survive and get a combined total of 10 kills or more on the first half of the scenario.
*VF-1J
**Milia must get a total of 10 kills in the first half of the scenario.
'''Unit Acquisition:'''
*VF-17S Nightmare (Kinryu)
*VF-17D Nightmare (Gamlin)
*VF-17D Nightmare (Physica)
*VF-1J S Valkyrie (Milia)
*LaGOWE (Waldfelt)
*BuCUE (Dacosta)
*Skygrasper (Cagalli)
*VF-19 Kai Fire Valkyrie (Basara)
*VF-17S Nighmare (Milia)
*VF-1J S Valkyrie

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Any ally is defeated '''Skill Point:''' Destroy all enemies in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Goshogun (Shingo, Killy, Remi)
*Good Thunder (Sabranth)

|-
| class="fc-route1" |'''第２２話：砂塵の果て Scenario 22 - Beyond the Clouds of Sand'''
| class="fc-route3" |'''第２２話：発動する力、無限大 Scenario 22 - Infinite Activation Power'''

|-
|'''Victory Condition:''' (1) Defeat the Lesseps; (2) Waltfeld is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated '''Skill Point:''' Defeat the Lesseps in 5 turns '''Secret Requirements:'''
*LaGOWE
**Kira must destroy Waltfeld's LaGOWE while in SEED. (Kira has to activate SEED mode before the event that ends the stage.)
'''Unit Acquisition:'''
*Kira unlocks the SEED pilot skill

|'''Victory Condition:''' (1) Soloship reaches the computer facility; (2) Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Get the Soloship to the indicated area in 4 turns without it taking any damage '''Secret Requirements:''' '''Unit Acquisition:'''
*HyoRyu (HyoRyu)
*EnRyu (EnRyu)

|-
| class="fc-route1" |'''第２３話：エモーション・ハイ Scenario 23 - Emotion High'''
| class="fc-route3" |'''第２３話：決戦！地獄の月荒野 Scenario 23 - Decisive Battle in the Hellish Lunar Wilderness!'''

|-
|'''Victory Condition:''' (1) Defeat 2 Ghosts; (2) Defeat all enemies; (3) Basara sings to Sivil, All ZAFT forces are defeated '''Defeat Condition:''' (1) Ally battleship is defeated, Battle 7 is defeated; (2) Ally battleship is defeated, Battle 7 is defeated, Isamu or Guld are defeated; (3) Ally battleship is defeated, Isamu, Guld, or Basara are defeated '''Skill Point:''' Clear the map in 9 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*YF-19's "Full Volley" attacks gains +200 Attack power
*YF-19 and YF-21 gain the "Double Pinpoint Barrier Punch" combination attack
*Battle 7 (Max, Exedore, Miho, Sally)
*VF-19 Kai Fire Valkyrie (Basara)
*Mazinkaiser
*Shin Getter Robo

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Clear the map in 9 turns '''Secret Requirements:''' '''Unit Acquisition:'''

|-
| colspan="2" class="fc-std-sc" |'''第２４話：戦神の星で Scenario 24 - On the Planet of the War God'''

|-
| colspan="2" |'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' (1) Any ally is defeated; (2) Ally battleship is defeated '''Skill Point:''' Destroy all enemies in 3 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*VF-19 Kai Fire Valkyrie (Basara)
*VF-11 MAXL Kai (Mylene)
*VF-17 Kai Nightmare (Ray, Veffidas)
*Tallgeese III (Zechs)
*Taurus (Noin)
*Voltes V (Kenichi, Ippei, Daijiroh, Hiyoshi, Megumi)
*Daimos (Kazuya)
*Garuba FX-II (Kyoshiro, Nana)

|-
| colspan="2" class="fc-std-sc" |'''第２５話：選ばれし者、選びし者 Scenario 25 - Those Who Are Chosen, Those Who Choose'''

|-
| colspan="2" |'''Victory Condition:''' (1) Hermos is defeated; (2) Zifrud is defeated '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Clear the map in 8 turns '''Secret Requirements:''' '''Unit Acquisition:'''

|-
| colspan="2" class="fc-std-sc" |'''第２６話：かりそめの旅人 Scenario 26 - Transitory Traveler'''

|-
| colspan="2" |'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated, Temjin, Fei Yen, or Apharmd are defeated '''Skill Point:''' Destroy all enemies in 3 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Temjin 747J (Chief)
*Fei Yen the Knight (Fei)
*Apharmd The Hatter (The Hatter)

|-
| colspan="2" class="fc-std-sc" |'''第２７話：勇気ある者達の誓い Scenario 27 - The Oath of the Courageous'''

|-
| colspan="2" |'''Victory Condition:'''
*1st Part: Defeat all enemies
*2nd Part: (1) Defeat all enemies; (2) Defeat the Z-Master within (10 (E) / 7 (N) / 5 (H)) turns 
'''Defeat Condition:'''
*1st Part: Ally battleship is defeated, Gai is defeated
*2nd Part: (1) Ally battleship is defeated, Gai or J are defeated; (2) (10 (E) / 7 (N) / 5 (H)) turns have passed, Ally battleship is defeated, Gai or J are defeated 
'''Skill Point:''' Destroy all enemies in 7 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*J-Ark (J, Tomoro)

|-
| colspan="2" class="fc-std-sc" |'''第２８話：いつか星の海へ Scenario 28 - Someday, In the Sea of Stars'''

|-
| colspan="2" |'''Victory Condition:''' (1)(2) Defeat the Zonder Robo; (3) Defeat the Zonder Robo within 6 attacks from Star GaoGaiGar; (4)(5) Defeat all enemies '''Defeat Condition:''' (1) Galeon is defeated; (2) Ally battleship is defeated, Galeon is defeated; (3) Ally battleship or Gai are defeated, Zonder Robo is not defeated within 6 attacks from Star GaoGaiGar (4) Main Character is defeated; (5) Ally battleship is defeated '''Skill Point:''' Destroy the Zonuder Robo in 5 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Galeon (Galeon)
*Star GaoGaiGar/GaoGaiGar (Gai)
*YF-19 (Isamu)
*YF-21 (Guld)
*Battle 7 (Max)
*VF-17S Nightmare (Milia)
*VF-17D Nightmare (Gamlin)
*VF-17D Nightmare (Physica)
*VF-19 Kai Fire Valkyrie (Basara)
*VF-11 MAXL Kai (Mylene)
*VF-17 Kai Nightmare (Ray, Veffidas)
*HyoRyu (HyoRyu)
*EnRyu (EnRyu)
*Goldymarg (Goldymarg)
*Volfogg (Volfogg)
*Mic Sounders XIII (Mic Sounder XIII)
*Ideon (Cosmo, Kasha, Moera)
*Soloship (Bess, Hatari)
*Star GaoGaiGar (Guy, Choryujin, Goldymarg, Mic, Volfogg)
*Dygenguar (Sanger)
*Aussenseiter (Ratsel)
*R-Blade Custom (Ryusei)
*R-Gun Powered (Viletta)

|-
| colspan="2" class="fc-std-sc" |'''第２９話：押された烙印 Scenario 29 - Branded with the Mark'''

|-
| colspan="2" |'''Victory Condition:''' (1)(2) Defeat all enemies '''Defeat Condition:''' (1) Ally battleship is defeated; (2) Ally battleship is defeated, Cagalli is defeated '''Skill Point:''' Destroy all enemies in 6 turns '''Secret Requirements:'''
*Destroid Monster
**Take the Space Route
*FBz-99G
**Take the Space Route
*Strike Rouge IWSP
**Cagalli must have 30 or more kills by the end of this stage.
***Take the Alaska Route
*Duel Gundam
**Take the Alaska Route
'''Unit Acquisition:'''
*GaoFighGar (Guy)
*HyoRyu (HyoRyu)
*EnRyu (EnRyu)
*Goldymarg (Goldymarg)
*Volfogg (Volfogg)/Big Volfogg (Big Volfogg)
*Mic Sounders XIII (Mic Sounders XIII)
*AnRyu (AnRyu)
*KouRyu (KouRyu)
*Ra Cailum (Bright, Torres)

|- class="fc-route-h"
|'''Head to Alaska''' Gundam (0083, Z, ZZ, CCA, Wing, SEED) Daitarn 3 Mazinger (Z, Great) Steel Jeeg Voltes V Daimos Dancouga Evangelion
|'''Go to Space''' GaoGaiGar Ideon Getter Robo Combattler V GaiKing Raideen Goshogun Macross (DYRL, 7, Plus) Virtual On

|-
| class="fc-route2" |'''第３０話：終わらない閃光 Scenario 30 - Unending Flashes of Light'''
| class="fc-route4" |'''第３０話：ロスト・ディーヴァ Scenario 30 - Lost Diva'''

|-
|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated, Kira is defeated '''Skill Point:''' Clear the map in 7 turns '''Secret Requirements:'''
*Strike Rouge IWSP
**Mwu must defeat Dearka
**After the event, Kira must defeat Athrun while both are in SEED.
'''Unit Acquisition:'''
*Skygrasper (Cagalli)
*Strike Gundam (Kira)
*Kira unlocks the SEED pilot skill
*Archangel loses Natarle as a subpilot

|'''Victory Condition:''' (1)(2) Defeat all enemies '''Defeat Condition:''' (1) Any ally is defeated: (2) Ally battleship is defeated, Fire Bomber, Diamond Force, or Skull Squadron are defeated '''Skill Point:''' In 6 turns, destroy Glavil and Gavil. You must destroy Glavil before Gavil '''Secret Requirements:'''
*Gavil and FBz-99G Zaubergeran
**Gamlin must defeat Gavil
'''Unit Acquisition:'''
*YF-19 (Isamu) (Before Deploying)
*YF-21 (Guld) (Before Deploying)
*VF-1S S Valkyrie (Focker)
*VF-1S S Valkyrie (Hikaru)
*VF-1A S Valkyrie (Kakizaki)
*VF-17D Nightmare (Gamlin)
*VF-17D Nightmare (Physica)
*VF-19 Kai Fire Valkyrie (Basara)
*VF-11 MAXL Kai (Mylene)
*VF-17 Kai Nightmare (Ray, Veffidas)

|-
| class="fc-route2" |'''第３１話：青き清浄なる世界のために Scenario 31 - For Our Blue & Pure World'''
| class="fc-route4" |'''第３１話：禁断の惑星へ Scenario 31 - To the Forbidden Planet'''

|-
|'''Victory Condition:''' (1) Defeat all enemies; (2)(3) Defeat all Mobile Dolls, All ZAFT Units retreat '''Defeat Condition:''' (1)(2) Ally battleship is defeated, Heero is defeated; (3) Ally battleship is defeated '''Skill Point:''' Do not let a single ZAFT machine get shot down '''Secret Requirements:'''
*Duel Gundam
**Yzak must survive the scenario.
'''Unit Acquisition:'''
*Archangel gains Newman as a subpilot
*Freedom Gundam (Kira)
*Daitarn 3 (Banjo)
*Black Wing (Alan)

|'''Victory Condition:'''
*1st Part: Defeat all enemies
*2nd Part: Defeat Gepelnitch
'''Defeat Condition:'''
*1st Part: Any ally is defeated
*2nd Part: Ally battleship is defeated, Basara or Gamlin are defeated
'''Skill Point:''' In 7 turns, destroy Glavil and Gavil and make Gepelnitch's ship retreat (at 50,000 HP) '''Secret Requirements:'''
*Destroid Monster
**Get the Skill Point on this stage.
*Gavil and FBz-99G Zaubergeran
**Gamlin must defeat Gavil 
'''Unit Acquisition:'''
*Destroid Monster

|-
| class="fc-route2" |'''第３２話：守護神の巫女 Scenario 32 - Priestess of the Guardian God'''
| class="fc-route4" |'''第３２話：インフィニティ・ソウル Scenario 32 - Infinity Soul'''

|-
|'''Victory Condition:''' (1)(2) Defeat all enemies '''Defeat Condition:''' Any Ally is defeated; Ally battleship is defeated, Sanger or Rastel are defeated '''Skill Point:''' In 5 turns, destroy the General of Hell or Flora. '''Secret Requirements:''' '''Unit Acquisition:'''
*Dygenguar (Sanger)
*Assenseiter (Ratsel)

|'''Victory Condition:''' (1) Valgo is defeated; (2)(3) Defeat all enemies '''Defeat Condition:''' (1) Mylene, Ray, or Gamlin are defeated; (2) Basara, Mylene, Ray, or Gamlin are defeated; (3) Ideon is defeated '''Skill Point:''' In 6 turns, destroy Valgo '''Secret Requirements:'''
*Gavil and FBz-99G Zaubergeran
**Gamlin must defeat Gavil 
'''Unit Acquisition:'''
*VF-17D Nightmare → VF-17S Nightmare (Gamlin)
*VF-17D Nightmare (Docker)
**VF-17S (Gamlin), VF-17D (Physica) and VF-17D (Docker) gain the "Diamond Force Attack" combination attack
*VF-19 Kai Fire Valkyrie, VF-11 MAXL Kai, and VF-17 Kai Nightmare gain the "Sound Booster" mech ability
**All VF-19 Kai Fire Valkyrie SB Songs gain (MAP) and (ALL) combination attack variants when Sound Booster activates.
**All VF-11 MAXL Kai SB Songs gain (MAP) and (ALL) combination attack variants when Sound Booster activates.
*Ideon (Cosmo, Kasha, Moera)
** Ideon gains the "Ideon Sword" and "Ideon Sword (MAP)" attacks when IDE gauge is full, and HP is below 30%
*Soloship (Bess, Hatari)

|-
| class="fc-route2" |'''第３３話：暁への脱出 Scenario 33 - Escape to Daybreak'''
| class="fc-route4" |'''第３３話：受け継ぎし遺産 Scenario 33 - The Successor's Inheritance'''

|-
|'''Victory Condition:''' (1)(2) Defeat all enemies besides the Albion (3) Reach the 9th turn '''Defeat Condition:''' (1) Ally battleship is defeated, Kira, Shinobu, or Alan are defeated, Albion is defeated; (2) Kira, Shinobu, Alan, Mwu, or Cagalli are defeated '''Skill Point:''' In 8 turns, destroy all enemies except the Albion '''Secret Requirements:''' '''Unit Acquisition:'''
*Strike Gundam (Mwu)
*Strike Rouge (Cagailli)
*M1 Astray (Juri)
*M1 Astray (Mayura)
*M1 Astray (Asagi)
*Justice Gundam (Athrun)
*Buster Gundam (Dearka)
*Mazinger Z gains the "Giant Swing Rocket Punch" attack
*Great Mazinger gains the "Great Booster" attack
*Koutetsu Jeeg stats are enhanced and can transform into Jeeg Panzeroid
*Dancouga and Black Wing can combine into Final Dancouga.

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated, Akira or Jinguji are defeated '''Skill Point:''' In 8 turns, destroy Etzira, Valgo, Glavil, Gabro Zan, and Gije '''Secret Requirements:''' '''Unit Acquisition:'''
*VF-1A S Valkyrie (Kakizaki)
*Raideen gains the Mutron Open mech ability
*Ideon (Cosmo, Kasha, Moera)
*Soloship (Bess, Hatari)
*Battle 7 (Max, Exedore, Miho, Sally)
*VF-1S S Valkyrie (Fokker)
*VF-1S S Valkyrie (Hikaru)
*VF-1A S Valkyrie (Kakizaki)
*YF-19 (Isamu)
*YF-21 (Guld)
*VF-19 Kai Fire Valkyrie (Basara)
*VF-11 MAXL Kai (Mylene)
*VF-17 Kai Nightmare (Ray, Veffidas)
*VF-17S Nightmare (Gamlin)
*VF-17D Nightmare (Physica)
*VF-17D Nightmare (Docker)

|}
 

==Stages 34 - 44==
{| width="100%"
|- class="fc-route-h"
| width="25%" |'''Touma Route'''
| width="25%" |'''Kusuha Route'''
| width="25%" |'''Cobray Route'''
| width="25%" |'''Selena Route'''

|-
| class="fc-route1" |'''第３４話：武人の心、その意味 Scenario 34 - Why a Warrior Fights'''
| class="fc-route2" |'''第３４話：怒りの強念者 Scenario 34 - The Wrath of a Esper'''
| class="fc-route3" |'''第３４話：虚ろな魂の捕囚 Scenario 34 - Captivity of the Hollow Soul'''
| class="fc-route4" |'''第３４話：ベトレイヤー Scenario 34 - Betrayer'''

|-
|'''Victory Condition:'''
*1st Part: (1)(2) Defeat all enemies
*2nd Part: Bemidoban is defeated 
'''Defeat Condition:'''
*1st Part: (1) Ally battleship is defeated; (2) Ally battleship is defeated, Touma is defeated
*2nd Part: Touma is defeated
'''Skill Point:''' Defeat all enemies within 6 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Raioh (Touma)
*Mazinger Z, Great Mazinger and Getter Dragon gain the "F Dynamic Special" combination attack

|'''Victory Condition:'''(1)(2) Shin RyuOhKi is defeated; (3)(4) Bemidoban and Shmuel are defeated '''Defeat Condition:''' (1) Any ally is defeated; (2) Kusuha is defeated; (3) Kusuha is defeated, Ally battleship is defeated; (4) Ally battleship is defeated '''Skill Point:''' Destroy the Bemidoban (retreats (8000 (E) / 10000 (N) / 12000 (H)) HP) '''Secret Requirements:''' '''Unit Acquisition:'''
*Mazinger Z, Great Mazinger and Getter Dragon gain the "F Dynamic Special" combination attack
*Dygenguar (Sanger)
*Aussenseiter (Ratsel)

|'''Victory Condition:''' Shin RyuOhKi is defeated '''Defeat Condition:''' Ally battleship is defeated, Cobray, Arad, or Seolla are defeated '''Skill Point:''' Defeat Shin RyuOuKi within 6 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Werkbau (Cobray)
*Mazinger Z, Great Mazinger and Getter Dragon gain the "F Dynamic Special" combination attack

|'''Victory Condition:''' (1) Shmuel is defeated; (2)(3) Bemidoban defeated Shin RyuOhKi '''Defeat Condition:''' (1) Selena is defeated; (2) Ally battleship is defeated, Selena is defeated; (3) Ally battleship is defeated '''Skill Point:''' Bemidoban and Shin RyuOuKi shot down. Both flee when below (8000 (E) / 10000 (N) / 12000 (H)) HP. '''Secret Requirements:''' '''Unit Acquisition:'''
*Mazinger Z, Great Mazinger and Getter Dragon gain the "F Dynamic Special" combination attack
*Alterion (CF) (Ibis, Tsugumi)
* Vegalion (Slay)
*AS Soleares (Selena, Elma)

|-
| class="fc-route1" |'''第３５話：闘志、誰がために Scenario 35 - For Whom the Fighting Spirit Burns'''
| class="fc-route2" |'''第３５話：魂、久遠に Scenario 35 - The Soul, Into Eternity'''
| class="fc-route3" |'''第３５話：THE GUN OF DIS Scenario 35 - THE GUN OF DIS'''
| class="fc-route4" |'''第３５話：クロージング・ハート Scenario 35 - Closing Heart'''

|-
|'''Victory Condition:''' (1)(2) Defeat all enemies '''Defeat Condition:''' (1) Touma is defeated; (2) Ally battleship is defeated, Touma, Sanger, or Rastel are defeated '''Skill Point:''' Defeat all enemies within 4 turns of allied reinforcements arriving. '''Secret Requirements:''' '''Unit Acquisition:'''
*DaiRaioh(Touma)
*Dygenguar (Sanger)
*Aussenseiter (Ratsel)

|'''Victory Condition:''' (1)(2)(3) Shin RyuOhKi is defeated '''Defeat Condition:''' (1) Kusuha or Bullet are defeated; (2) Kusuha is defeated; (3) Ally battleship is defeated, Kusuha is defeated '''Skill Point:''' Destroy Shin RyuOhKi within 6 turns of Varuch Ben and Ishar's arrival, destroying them first. '''Secret Requirements:''' '''Unit Acquisition:'''
*GouRyu Kai (Kusuha)
*Raiko Kai (Bullet)
*Shin RyuKoOh (Kusuha, Bullet)
*Dygenguar (Sanger)
*Aussenseiter (Ratsel)

|'''Victory Condition:''' (1)(2) Bemidoban or Shmuel are defeated; (3) ??? is defeated; (4) Valk Baal is defeated '''Defeat Condition:''' (1) Cobray is defeated, (2)(3)(4) Ally battleship is defeated, Cobray is defeated '''Skill Point:''' Defeat the Bemidoban within 5 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Varuch Ben (Cobray)
*Dis Astranagant (Cobray)

|'''Victory Condition:''' (1)(2) Defeat all enemies '''Defeat Condition:''' (1) Selena is defeated; (2) Ally battleship is defeated '''Skill Point:''' Map cleared within 7 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Eslim (Selena)
* AS Alegrias (Selena, Elma)
*Alterion (CF) replaces Tsugumi with Slay as a Subpilot

|-
| colspan="4" class="fc-std-sc" |'''第３６話：激突！勇者VS勇者！ Scenario 36 - Clash! Brave vs. Brave!'''

|-
| colspan="4" |'''Victory Condition:'''
*1st Part: Defeat all enemies
*2nd Part: Ally battleship is defeated
'''Defeat Condition:'''
*1st Part: Star GaoGaiGar is defeated
*2nd Part: Gai is defeated
'''Skill Point:''' Defeat all enemies within 6 turns. '''Secret Requirements:'''
*EVA-01 F-Type Equipment
**Shinji must defeat Ramiel on the first part of this scenario.
*Early Nu Gundam HWS
**Amuro must have 60 or more kills by the end of the scenario.
*GP-02A
**Burning, Monsha, Bate, and Adel must have a combined killcount of 100 or more by the end of the scenario.
*Nuclear Bazooka
**Meet the requirements for GP-02A
*Black Getter
**Michiru must have 20 kills or more by the end of the scenario.
'''Unit Acquisition:'''
*Gundam GP02
*Megarider
*Re-GZ BWS
*MP Nu Gundam
*Black Getter
*VF-1S S Valkyrie (Fokker)
*VF-1S S Valkyrie (Hikaru)
*VF-1A S Valkyrie (Kakizaki)
*VF-1J S Valkyrie
*YF-19 (Isamu)
*YF-21 (Guld)
*Battle 7 (Max)
*VF-19 Kai Fire Valkyrie (Basara)
*VF-11 MAXL Kai (Mylene)
*VF-17 Kai Nightmare (Ray)
*VF-17S Nightmare (Gamlin)
*VF-17D Nightmare (Physica)
*VF-17D Nightmare (Docker
*Soloship (Bess, Hatari)
*Ideon (Cosmo, Kasha, Moera)

|-
| colspan="4" class="fc-std-sc" |'''第３７話：果て無き旅路の始まり Scenario 37 - The Beginning of an Unending Journey'''

|-
| colspan="4" |'''Victory Condition:''' (1) Defeat all enemies; (2)(3) Devariim is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated; (3) Ally battleship is defeated, Bundle, Cutnall, or Kernagul are defeated
'''Skill Point:''' All enemies destroyed within 6 turns, with Devariim being last. '''Secret Requirements:''' '''Unit Acquisition:'''
*Heavy Weapons System parts for Nu Gundam
*Evangelion Unit 0 Custom gains the "N2 Mine" MAP attack
*Evangelion Unit 1 gains the "Magoroku E Sword" attack
*Gunbuster (Noriko)
*Sizzler Black (Jung)
*Eltrium (Tashiro, Deputy Chief)
*Bundle Ship (Bundle)
*Cutnall Ship (Cutnall)
*Kernagul Ship (Kernagul)

|- class="fc-route-h"
| colspan="2" |'''Go with the Soloship''' Gundam (0083, Zeta, ZZ, CCA, Wing, SEED) Getter Robo Raideen Daitarn 3 Evangelion Ideon GaoGaiGar
| colspan="2" |'''Go with the Battle 7''' Mazinger (Z, Great) Macross (DYRL, 7, Plus) Steel Jeeg Combattler V Voltes V Gunbuster Daimos Gaiking Goshogun Dancouga Virtual On

|-
| colspan="2" class="fc-route1" |'''第３８話：運命の炎の中で Scenario 38 - Within the Fires of Destiny'''
| colspan="2" class="fc-route3" |'''第３８話：戦火は星の瞬きと Scenario 38 - The Fires of War Among the Twinkling Stars'''

|-
| colspan="2" |'''Victory Condition:'''
*1st Part: Enemy Battleship is defeated
*2nd Part: (1) Defeat all enemies; (2) Dalam's Ship is defeated
'''Defeat Condition:'''
*1st Part: Ally battleship is defeated, Ideon is defeated
*2nd Part: (1) Ally battleship is defeated; (2) Ally battleship is defeated, Cosmo is defeated
'''Skill Point:''' Clear the map within 7 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Ideon loses Moera as a subpilot
*Ideon gains the "Ideon Gun" attack

| colspan="2" |'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Defeat all enemies within 6 turns. '''Secret Requirements:''' '''Unit Acquisition:'''

|-
| colspan="2" class="fc-route1" |'''第３９話：果てに待つもの Scenario 39 - What Awaits at the End'''
| colspan="2" class="fc-route3" |'''第３９話：ただ母星のために Scenario 39 - All for the Motherworld'''

|-
| colspan="2" |'''Victory Condition:''' (1)(2)Gabro Zan is defeated '''Defeat Condition:''' (1) Ally battleship is defeated, Ryouma, Hayato, Benkei, or Michiru are defeated; (2) Ally battleship is defeated, Ryouma, Hayato, Benkei, or Cosmo are defeated '''Skill Point:''' Destroy all Buff Clan ships within 8 turns, saving Gabro Zan for last. '''Secret Requirements:''' '''Unit Acquisition:'''
* Ideon gains Gije as a subpilot
* Shin Getter-1 gains the "Shin Shine Spark" attack

| colspan="2" |'''Victory Condition:''' Heinel is defeated '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Within 7 turns, defeat all enemies, then defeat Heinel and Richter (Richter must be defeated before Heinel) '''Secret Requirements:''' '''Unit Acquisition:'''

*Goshogun gains the "GoFlasher Special" attack

|-
| colspan="2" class="fc-route1" |'''第４０話：勇者王、最後の刻！ Scenario 40 - The King of Brave’s Final Hour!'''
| colspan="2" class="fc-route3" |'''第４０話：勇気、果つる時… Scenario 40 - When Courage Fails...'''

|-
| colspan="2" |'''Victory Condition:'''
*1st Part: Defeat all enemies
*2nd Part: Ally battleship is defeated
'''Defeat Condition:'''
*1st Part: Defeat all enemies
*2nd Part: Gai is defeated
'''Skill Point:''' Defeat all enemies within 6 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*All GaoGaiGar units are lost

| colspan="2" |'''Victory Condition:''' (1)(2)(3) Defeat all enemies '''Defeat Condition:''' (1) Gai is defeated; (2) Ally battleship is defeated, Gai is defeated; (3) Ally battleship is defeated '''Skill Point:''' Defeat all enemies within 7 turns, with Palparepa Plus being the last one. '''Secret Requirements:''' '''Unit Acquisition:'''
*GaoFighGar (Gai)
*All GaoGaiGar units are lost

|-
| colspan="4" class="fc-std-sc" |'''第４１話：銀河が消滅する日 Scenario 41 - The Day the Galaxy is Extinguished'''

|-
| colspan="4" |'''Victory Condition:''' (1) Defeat all enemies; (2) GaoFighGar is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated, J is defeated '''Skill Point:''' GaoFighGar shot down by turn 7. '''Secret Requirements:'''
*Gije & Ganga Rube
**When given the option, choose to meet the opponent's challenge (first option).
'''Unit Acquisition:'''
*J-Ark (J, Tomoro)
|-
| colspan="4" class="fc-std-sc" |'''第４２話：超勇者黙示録 Scenario 42 - The Super Brave Apocalypse'''

|-
| colspan="4" |'''Victory Condition:'''
*1st Part: Defeat all enemies
*2nd Part: Genesis GaoGaiGar reaches the designated point in 4 turns
'''Defeat Condition:'''
*1st Part: Gai or J are defeated
*2nd Part: Ally battleship is defeated, Gai is defeated, 5th turn is reached
'''Skill Point:''' All enemies shot down by turn 7. '''Secret Requirements:'''
* J-Phoenix & Renais (Sub Pilot)
**Have J defeat Pia Decem on the first part of the stage. Defeat Pia Decem again to gain the attack.
'''Unit Acquisition:'''
* King J-der gains the "J-Phoenix" attack, and gains Renais as a sub-pilot
**Koryuu and Anryuu lose the "Renais Support Attack" attacks
*Genesic GaoGaiGar (Gai)
*J-Ark (J, Tomoro)
** Renais also is a sub-pilot if the conditions are met in the first part of the stage
*Goldymarg (Goldymarg)
*Big Volfogg (Volfogg)
*TenRyuJin (TenRyuJin)
*KoRyu (KoRyu)
*AnRyu (AnRyu)
*EnRyu (EnRyu)
*HyoRyu (HyoRyu)
*Mic Sounder XIII (Mic Sounder XIII)

|- class="fc-route-h"
|'''Touma Route'''
|'''Kusuha Route'''
|'''Cobray Route'''
|'''Selena Route'''

|-
| class="fc-route1" |'''第４３話：閉ざされた世界で Scenario 43 - In a Closed-Off World'''
| class="fc-route2" |'''第４３話：真の龍神 Scenario 43 - The True Dragon God'''
| class="fc-route3" |'''第４３話：人形たちの宴 Scenario 43 - The Doll’s Banquet'''
| class="fc-route4" |'''第４３話：サイレント・クライ Scenario 43 - Silent Cry'''

|-
|'''Victory Condition:'''
*1st Part: (1) Defeat all enemies; (2) Vaikran is defeated, Houle is defeated
*2nd Part: Baran is defeated
'''Defeat Condition:'''
*1st Part: (1) Ally battleship is defeated, Touma or Ryusei are defeated; (2) Ally battleship is defeated, Ryusei is defeated
*2nd Part: Touma is defeated
'''Skill Point:''' Defeat the Bemidoban within 5 turns. '''Secret Requirements:''' '''Unit Acquisition:'''

|'''Victory Condition:''' (1) Defeat Shin RyuOhKi; (2) Vaikran is defeated, Houle is defeated '''Defeat Condition:''' (1) Kusuha or Ryusei are defeated; (2) Ally battleship is defeated, Ryusei is defeated '''Skill Point:''' Defeat Shin RyuOhKi within 5 turns. '''Secret Requirements:''' '''Unit Acquisition:'''

|'''Victory Condition:'''
*1st Part: (1) Defeat all enemies; (2) Vaikran is defeated, Houle is defeated
*2nd Part: Valk Baal is defeated
'''Defeat Condition:'''
*1st Part: (1)(2) Ally battleship is defeated, Ryusei is defeated
*2nd Part: Cobray is defeated
'''Skill Point:''' Defeat the Bemidoban within 5 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Dis Astranagant (Cobray) is unavailable during the intermission

|'''Victory Condition:''' (1) Defeat all enemies; (2)(3) Vaikran is defeated, Houle is defeated'''Defeat Condition:''' (1)(2) Ally battleship is defeated, Selena, Ibis, or Ryusei are defeated (3) Ryusei is defeated'''Skill Point:''' Defeat the Bemidoban within 5 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*AS Alegrias (Selena, Elma?) Is unavailable until the next stage

|-
| class="fc-route1" |'''第４４話：闘志、未来のために Scenario 44 - Fighting Spirit, for the Future'''
| class="fc-route2" |'''第４４話：四神招魂、ここに Scenario 44 - The Four Gods Souls, Gather Here'''
| class="fc-route3" |'''第４４話：鋼の戦神 Scenario 44 - The Steel War God'''
| class="fc-route4" |'''第４４話：マイホーム・マイフレンズ Scenario 44 - My Home, My Friends'''

|-
|'''Victory Condition:'''
*1st Part: Vaikran is defeated
*2nd Part: (1)(2) Vaikran is defeated
'''Defeat Condition:'''
*1st Part: Ally battleship is defeated, Ryusei is defeated
*2nd Part: (1) Touma or Lyria are defeated; (2) Touma, Baran, or Lyria are defeated
'''Skill Point:''' Destroy the Vaikran within 5 turns. '''Secret Requirements:'''
*VF-19F Excaliburs
**Max must have a total of 60 or more kills by the end of the scenario, if you do not pick the Go to Varauta route.
*Gije & Ganga Rube
**You must pick the Go To Bozoan Route.
'''Unit Acquisition:'''
* DaiRaioh gains the "Jinrai" attack 
*Banpreios (Ryuusei, Rai, Mai)
*Dygenguar (Sanger)
*Aussenseiter (Ratsel)
*Shumel (Lyria)
*Bemidoban (Baran)

|'''Victory Condition:'''
*1st Part: Vaikran is defeated
*2nd Part: (1)(2) Vaikran is defeated
'''Defeat Condition:'''
*1st Part: Kusuha or Ryusei are defeated
*2nd Part: (1) Ally battleship is defeated, Kusuha is defeated; (2) Kusuha, Bullet, or Lyria are defeated
'''Skill Point:''' Destroy the Vaikran within 5 turns. '''Secret Requirements:'''
*VF-19F Excaliburs
**Max must have a total of 60 or more kills by the end of the scenario, if you do not pick the Go to Varauta route.
*Gije & Ganga Rube
**You must pick the Go To Bozoan Route.
'''Unit Acquisition:'''
*Banpreios (Ryuusei, Rai, Mai)
*Dygenguar (Sanger)
*Aussenseiter (Ratsel)
*Shumel (Lyria)
*Shin RyuKoOh can now transform into Shin KoRyuOh

|'''Victory Condition:'''
*1st Part: (1) Defeat all enemies; (2) Vaikran is defeated
*2nd Part: Defeat all enemies
'''Defeat Condition:'''
*1st Part: (1)(2) Ally battleship is defeated, Ryusei, Arad or Seola are defeated
*2nd Part: Ally battleship is defeated, Cobray or Lyria are defeated
'''Skill Point:''' Destroy the Vaikran within 3 turns of its arrival. '''Secret Requirements:'''
*VF-19F Excaliburs
**Max must have a total of 60 or more kills by the end of the scenario, if you do not pick the Go to Varauta route.
*Gije & Ganga Rube
**You must pick the Go To Bozoan Route.
'''Unit Acquisition:'''
*Dis Astranagant (Cobray)
*Banpreios (Ryuusei, Rai, Mai)
*Dygenguar (Sanger)
*Aussenseiter (Ratsel)
*Shumel (Lyria)

|'''Victory Condition:'''
*1st Part: (1) Valk Isher is defeated; (2) Vaikran is defeated
*2nd Part: (1)(2) Vaikran is defeated
'''Defeat Condition:'''
*1st Part: (1)(2) Ally battleship is defeated, Ryusei or Ibis are defeated
*2nd Part: (1) Ally battleship is defeated, Selena, Ibis, or Lyria are defeated; (2) Selena or Lyria are defeated
'''Skill Point:''' Destroy the Vaikran within 3 turns of its arrival. '''Secret Requirements:'''
*VF-19F Excaliburs
**Max must have a total of 60 or more kills by the end of the scenario, if you do not pick the Go to Varauta route.
*Gije & Ganga Rube
**You must pick the Go To Bozoan Route.
'''Unit Acquisition:'''
*Banpreios (Ryuusei, Rai, Mai)
*Dygenguar (Sanger)
*Aussenseiter (Ratsel)
*Shumel (Lyria)
*Alterion (CF) replaces Slay with Tsugumi as a subpilot
*Vegalion (Slay)
**Alterion (CF) and Vegalion can combine into Hyperion

|}
 

==Stages 45 - 48==
{| width="100%"
|- class="fc-route-h"
| colspan="2" |'''Go to Earth'''
| colspan="2" |'''Go to Space'''

|- class="fc-route-h"
| width="25%" |'''Search for Irui''' Mazinger (Z, Great) Getter Robo Kotetsu Jeeg Gaiking Dancouga
| width="25%" |'''Fight against ZAFT''' Gundam (0083, Z, ZZ, CCA) Gundam Wing Gundam SEED Evangelion
| width="25%" |'''Go to Varauta''' Macross (DYRL, 7, Plus) GoShogun Daitarn 3 Gunbuster
| width="25%" |'''Go to Boazan''' Ideon Combattler V Voltes V Daimos Raideen GaoGaiGar Virtual On

|-
| class="fc-route1" |'''第４５話：とらわれの心、叫ぶ時 Scenario 45 - When the Captive Heart Cries Out'''
| class="fc-route2" |'''第４５話：忍び寄る終焉 Scenario 45 - Creeping Death'''
| class="fc-route3" |'''第４５話：悪夢の突入作戦 Scenario 45 - Charging into a Nightmare'''
| class="fc-route4" |'''第４５話：もう一つの母星ボアザン Scenario 45 - Another Mother Planet - Boazan'''

|-
|'''Victory Condition:''' (1) Defeat all enemies: (2) Legion is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated '''Skill Point:''' Defeat all enemies within 7 turns '''Secret Requirements:'''
'''Unit Acquisition:'''

|'''Victory Condition:''' (1) Defeat all enemies; (2) All Angels are defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated, Shinji, Asuka, or Rei are defeated '''Skill Point:''' Defeat all enemies within 5 turns. '''Secret Requirements:'''
*Early Nu Gundam HWS
**If you did not receive it on Scenario 37, Amuro must have 60 or more kills by the end of the scenario.
*EVA-01 F-Type Equipment(optional)
**Shinji must defeat Armisael.
*Neue Ziel
**Kou must have 40 or more kills than Keith by the end of the scenario.
*Val Varo
**Keith must have 20 or more kills than Kou by the end of the scenario.
*Gerbera Tetra
**Kou and Keith's killcounts must be within 6 of one another by the end of the scenario.
*Quin Mantha
**The sum of Ple and Ple 2's killcounts must be a number ending in 5 at the end of the scenario.
*Haman's Qubeley
**The sum of Ple and Ple 2's killcounts must be a number ending in 0 at the end of the scenario.
*MP Qubeleys
**The sum of Ple and Ple 2's killcounts must be a number ending in 7 at the end of the scenario.
*Doven Wolf
**The sum of Beecha and Mondo's killcounts must be a number ending in 0 at the end of the scenario.
*Geymalk
**The sum of Beecha and Mondo's killcounts must be a number ending in 5 at the end of the scenario.
*Strike Rouge IWSP
**The sum of Cagalli, Julie, Mayura, and Asagi's killcounts must be 100 or more by the end of the scenario.
*Early Full Armor ZZ Gundam
**Judau, Mondo, Beecha, Elle, Roux, and Iino's combined killcounts must be greater than 115 by the end of this scenario.
'''Unit Acquisition:'''
*Neue Ziel OR Val Varo OR Gerbera Tetra
*Quin Mantha OR Haman's Qubeley OR Mass Production Qubeley (x2)
*Doven Wolf OR Geymalk
*Strike Rougue IWSP
*Heavy Weapon System for Nu Gundam
*Full Armor Parts for ZZ Gundam
*Evangelion Unit 2 gains the "A.T. Field" attack
*Evangelion Unit 0 Custom gains the "Lance of Longinus" attack

|'''Victory Condition:'''
*1st Part: All allies reach the designated point, aside Battle 7
*2nd Part: Any ally reaches the designated point
'''Defeat Condition:'''
*1st Part: Any ally is defeated
*2nd Part: Any ally is defeated
'''Skill Point:''' Defeat all enemies before moving a unit to the target area. '''Secret Requirements:'''
'''Unit Acquisition:'''
*The following all gain the "Large Anti-Ship Reaction Missile" attack
**VF-1S S Valkyrie (Focker), VF-1S S Valkyrie (Hikaru), VF-1A S Valkyrie (Kakizaki)
**VF-17S Nightmare (Gamlin), VF-17D Nightmare (Docker), VF-17D Nightmare (Physica)
**YF-19 (Isamu), YF-21 (Guld)

|'''Victory Condition:''' Zartan is defeated '''Defeat Condition:''' Any ally is defeated '''Skill Point:''' Destroy all other enemies before destroying Zaltan. '''Secret Requirements:'''
'''Unit Acquisition:'''
*Voltes V is unavailable during the intermission
*Daimos is unavailable during the intermission

|-
| class="fc-route1" |'''第４６話：さらば父よ、戦士達の旅立ち Scenario 46 - Farewell, Father! The Warriors Depart'''
| class="fc-route2" |'''第４６話：永遠を信じて Scenario 46 - Believe in Eternity'''
| class="fc-route3" |'''第４６話：野望の第４惑星 Scenario 46 - The Fourth Planet of Ambition'''
| class="fc-route4" |'''第４６話：崩れゆく邪悪の塔 Scenario 46 - The Collapsing Tower of Evil'''

|-
|'''Victory Condition:''' (1) Steel Jeeg persuades Flora; (2) Defeat Yamata no Orochi, Demonica, and the Dragon Ship; (3) '''Defeat Condition:''' (1) Flora is defeated, Ally battleship is defeated, Kouji, Tetsuya, or Steel Jeeg are defeated; (2) Yamata no Orochi reaches the designated point, Ally battleship is defeated, Kouji, Tetsuya or Steel Jeeg are defeated '''Skill Point:''' Destroy Ryuuma and the Grand Marshall of Hell within 8 turns. '''Secret Requirements:'''
*Minmei's Disc
**Move Boss's squad onto either 'Hut' tile on the beach, and you will pick up the item
'''Unit Acquisition:'''
*Mazinkaizer gains the "Kaizer Nova" attack and Flight (S Rank in Air)

|'''Victory Condition:''' (1)(2) Defeat all enemies; (3) The Dominion withdraws '''Defeat Condition:''' (1) Any ally is defeated; (2)(3) Ally battleship is defeated, Kira or Athrun are defeated '''Skill Point:''' Destroy the Dominion (retreats at (10000HP (E) / 15000HP (N)/20000HP (H)) '''Secret Requirements:''' '''Unit Acquisition:'''
*Eternal (Lacus, Andrew)
*BuCUE
*METEOR parts for Freedom Gundam
*METEOR parts for Justice Gundam
*LaGOWE

|'''Victory Condition:''' (1) Guide all enemies east past the designated line; (2) All allies reach the escape point '''Defeat Condition:''' (1) Any ally is defeated, Any enemy is defeated; (2) Any ally is defeated '''Skill Point:''' Clear the map by defeating all enemies within 8 turns of the victory condition change '''Secret Requirements:'''
*VF-19F Excaliburs
**Max must get 15 or more kills on this scenario.
'''Unit Acquisition:'''
*VF-22S Sturmvogel II (Max)
*FBz-99G Zaubergeran (Gamlin)
*VF-19 Kai Fire Valkyrie gains the song "TRY AGAIN"
**VF-19 Kai Fire Valkyrie, VF-11 MAXL Kai, and VF-17 Kai Nightmare gain the "TRY AGAIN" (MAP) and (ALL) combination attack

|'''Victory Condition:''' (1) None; (2) Warchimedes is defeated; (3) Janera is defeated '''Defeat Condition:''' (1) Any friendly unit is defeated, Voltes V or Daimos are defeated; (2)(3) Ally battleship is defeated, Hyouma, Ken'ichi, Kazuya, or Heinel are defeated '''Skill Point:''' Destroy all enemies and finish the stage within 10 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Combattler V, Voltes V, and Daimos gain the "Choudenji SeiKenZuki" combination attack

|-
| class="fc-route1" |'''第４７話：神になろうとした男 Scenario 47 - The Man Who Tried to Become a God'''
| class="fc-route2" |'''第４７話：ヒトの見た夢 Scenario 47 - The Dream People Saw'''
| class="fc-route3" |'''第４７話：大宇宙の意志 Scenario 47 - The Will of the Universe'''
| class="fc-route4" |'''第４７話：因果の海で Scenario 47 - In the Sea of Causality'''

|-
|'''Victory Condition:''' (1) Defeat all enemies; (2) Shapiro is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated '''Skill Point:''' Destroy Shapiro within 6 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Gaiking and Daiku Maryuu gain the "Giant Cutter Upside-down Slash" combination attack

|'''Victory Condition:''' (1)(2)(3) Defeat all enemies; '''Defeat Condition:''' (1) Ally battleship is defeated, Kira, Mwu, or Dearka are defeated; (2) Kira is defeated; (3) The Vesalius is defeated '''Skill Point:''' Orga, Clotho and Shani shot down before Fllay reaches the Dominion. '''Secret Requirements:''' '''Unit Acquisition:'''

|'''Victory Condition:''' (1)(2)(3) Defeat all enemies '''Defeat Condition:''' (1) Any ally is defeated; (2) Ally battleship is defeated, Bundle is defeated; (3) Ally battleship is defeated, Bundle, Gamlin, or Mylene are defeated '''Skill Point:''' Destroy all SMTC units within 5 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*VF-19S Excalibur (before deployment)
*VF-19F Excalibur (x2) (before deployment)
*Bundle's Ship (Bundle, Cutnal, Kernagul)

|'''Victory Condition:'''
*1st and 2nd Part: Defeat all enemies within (5 (E) / 4 (N) / 3 (H)) turns
*3rd and 4th Part: Defeat all enemies within (4 (E) / 3 (N) / 2 (H)) turns
*5th Part: Defeat all enemies within (8 (E) / 7 (N) / 6 (H)) turns
'''Defeat Condition:'''
*1st and 2nd Part: Ally battleship is defeated, Turn (6 (E) / 5 (N) / 4 (H)) is reached
*3rd and 4th Part: Ally battleship is defeated, Turn (5 (E) / 4 (N) / 3 (H)) is reached
*5th Part: Ally battleship is defeated, Turn (9 (E) / 8 (N) / 7 (H)) is reached
'''Skill Point:''' During the 5th Part: Shoot down the two Gataman Zans before the Gabro Zan '''Secret Requirements:''' '''Unit Acquisition:'''

|-
| colspan="2" class="fc-route1" |'''第４８話：失われた者たちへの鎮魂歌 Scenario 48 - Requiem for the Lost'''
| colspan="2" class="fc-route4" |'''第４８話：銀河に死す Scenario 48 - To Die in the Galaxy'''

|-
| colspan="2" |'''Victory Condition:''' (1) Deathgaia, Gildrome, and Helmut are defeated; (2) Mute Zalbados is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated '''Skill Point:''' Defeat all enemies within 6 turns after Muge Zalbados appears, then defeat Muge Zalbados '''Secret Requirements:'''
*Early Nu Gundam HWS
**If you did not receive it on Scenario 37 or 45, Amuro must have 60 or more kills by the end of the scenario.
'''Unit Acquisition:'''

| colspan="2" |'''Victory Condition:''' (1) Defeat all enemies; (2) Gollum or Zomd are defeated; (3) Defeat all enemies; (4) Gabro Zan is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated, Basara is defeated; (3)(4) Ally battleship is defeated, Ideon is defeated '''Skill Point:''' Destroy GaviGla (retreats at 8000HP (E) / 10000HP (N) / 12000HP (H)) '''Secret Requirements:'''
*Early Nu Gundam HWS
**If you did not receive it on Scenario 37 or 45, Amuro must have 60 or more kills by the end of the scenario.
*Gije & Ganga Rube
**The Ide Gauge must reach level 5 during this scenario.
'''Unit Acquisition:'''
*Ideon replaces Gije with Dek as a Subpilot
*Battle 7 gains the "Large Anti-Ship Reaction Missile" attack
*VF-19 Kai Fire Valkyrie (Basara) is unavailable during the intermission

|}
 

==Stages 49 - 58==
{| width="100%"
|-
| colspan="3" class="fc-std-sc" |'''第４９話：銀河に響く歌声 Scenario 49 - Songs Resounding Through the Galaxy'''

|-
| colspan="3" |'''Victory Condition:'''
*1st Part: Defeat all enemies, In 5 turns Battle 7 reaches the designated point
*2nd Part: (1) In 6 turns, Battle 7 reaches the designated point; (2)(3)(4) Gepelnitch is defeated
'''Defeat Condition:'''
*1st Part: Ally battleship is defeated, Battle 7 doesn't reach the designated point by turn 6
*2nd Part: (1) Ally battleship is defeated, Mylene or Ray are defeated, Battle 7 doesn't reach the designated point by turn 7; (2) Ally battleship is defeated, Ray is defeated; (3) Ally battleship is defeated, Basara, Mylene, or Ray are defeated; (4) Ally battleship is defeated, Basara, Mylene, Ray, or Sybil are defeated
'''Skill Point:''' GaviGla is defeated (in the 1st part) '''Secret Requirements:'''
*Gavil and FBz-99G Zaubergeran
**If Gamlin has over 50 kills, Gamlin must defeat GaviGla during the first half of the scenario. During the second half of the scenario, do not defeat Gavil.
'''Unit Acquisition:'''
*VF-22S Sturmvogel II (Max)
*VF-22S Sturmvogel II (Milia)
*Sybil (Sybil)
**VF-19 Kai Fire Valkyrie, VF-11 MAXL Kai, and VF-17 Kai Nightmare, and Sybil gain the "TRY AGAIN" combination attack
*FBz-99G Zaubergeran (Gavil)

|-
| colspan="3" class="fc-std-sc" |'''第５０話：二つの門と二つの星 Scenario 50 - Two Gates, Two Stars'''

|-
| colspan="3" |'''Victory Condition:''' (1) Hermodr Echad is defeated; (2) Zfield is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated '''Skill Point:''' Destroy the Hermodr Echad within 5 turns. '''Secret Requirements:'''
*Duel Gundam & Yzak
**Dearka's killcount must be 50 or more by the end of the scenario.
'''Unit Acquisition:'''

|-
| colspan="3" class="fc-std-sc" |'''第５１話：終わらない明日へ Scenario 51 - To an Unending Tomorrow'''

|-
| colspan="3" |'''Victory Condition:'''
*1st Part: (1) Destroy all nuclear missiles; (2) Dominion is defeated & Athrun reaches the designated point
*2nd Part: Destroy the Genesis reactor within 4 turns
'''Defeat Condition:'''
*1st Part: (1) Any missile reaches the end of the map, Ally battleship is defeated, Kira, Athrun or Cagalli are defeated; (2) Ally battleship is defeated, Kira, Athrun or Cagalli are defeated
*2nd Part: Kira is defeated, reach the 5th turn
'''Skill Point:''' Destroy the Providence Gundam (in the 2nd part) '''Secret Requirements:'''
*Duel Gundam & Yzak
**During the first half of the scenario, destroy all of the nukes, then have Dearka battle with Yzak
**Both must survive the first half of the scenario
'''Unit Acquisition:'''
*Cagalli and Lacus unlock the SEED pilot skill
*Duel Gundam (Yzak) (can join permanently)

|-
| colspan="3" class="fc-std-sc" |'''第５２話：世界の中心でアイを叫んだもの Scenario 52 - The One Who Cried "Love" at the Heart of the World'''

|-
| colspan="3" |'''Victory Condition:'''
*1st Part: (1)(2)(3) Defeat all enemies (4)(5) EVA Unit 1 is defeated
*2nd Part: EVA Unit 1 is defeated
'''Defeat Condition:'''
*1st Part: (1) Any ally is defeated; (2) Shinji is defeated; (3)(4) Ally battleship is defeated; (5) Ally battleship is defeated, Reach the 6th turn after the "Cross" grows from the Earth
*2nd Part: Shinji is defeated
'''Skill Point:''' Asuka survives for 2 full turns. '''Secret Requirements:'''
*Neue Ziel
**Kou must have 40 or more kills than Keith by the end of the scenario.
*Val Varo
**Keith must have 20 or more kills than Kou by the end of the scenario.
*Gerbera Tetra
**Kou and Keith's killcounts must be within 6 of one another by the end of the scenario.
*Quin Mantha
**The sum of Ple and Ple 2's killcounts must be a number ending in 5 at the end of the scenario.
*Haman's Qubeley
**The sum of Ple and Ple 2's killcounts must be a number ending in 0 at the end of the scenario.
*MP Qubeleys
**The sum of Ple and Ple 2's killcounts must be a number ending in 7 at the end of the scenario.
*Doven Wolf
**The sum of Beecha and Mondo's killcounts must be a number ending in 0 at the end of the scenario.
*Geymalk
**The sum of Beecha and Mondo's killcounts must be a number ending in 5 at the end of the scenario.
*EVA-01 F-Type Equipment
**Shinji must defeat Zeruel on the first part of this scenario.
**Shinji must defeat EVA-01 on the second part of this scenario.
**The sum of Shinji, Asuka, and Rei's killcounts must be 250 or more, or 150 or more if you met the requirement on scenario 45.
*Hi-Nu Gundam
**Amuro and Bright's combined killcounts must be greater than 120 by the end of this scenario.
*Sazabi
**Amuro and Kamille's killcount must be 50 or more each at the end of this scenario. You will receive it at the start of next scenario.
*Strike Rouge IWSP
**If you did not receive it on Scenario 45, the sum of Cagalli, Julie, Mayura, and Asagi's killcounts must be 100 or more by the end of the scenario.
*Destroid Monster
**If you did not receive it on Scenario 31, the sum of Fokker, Hikaru, and Kakizaki's killcounts must be 100 or more by the end of this scenario.
'''Unit Acquisition:'''
*Evangelion Unit 0 (Kaowru)
*Evangelion Unit 0 loses the "Lance of Longinus" attack

|-
| colspan="3" class="fc-prologue" |'''Beyond this point, losing Ideon results in a Game Over'''
|-
| colspan="3" class="fc-std-sc" |'''第５３話：出航！銀河殴り込み艦隊！ Scenario 53 - The Galactic Assault Fleet Takes Sail!'''

|-
| colspan="3" |'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' 230 enemy units shot down by turn 7. '''Secret Requirements:''' '''Unit Acquisition:'''
*All secret units and parts are given after the stage begins <ul><li>Neue Ziel OR Val Varo OR Gerbera Tetra</li><li>Quin Mantha OR Haman's Qubeley OR Mass Production Qubeley (x2)</li><li>Doven Wolf OR Geymalk</li><li>Strike Rougue IWSP</li><li>Hi-Nu Gundam</li><li>Sazabi</li><li>Destroid Monster</li><li>F-Type Equipment for Evangelion Unit 1</li><li>Atomic Bazooka parts for GP-02</li><li>Heavy Weapon System for Nu Gundam</li></ul>
* Full Armor modular parts for Gundam ZZ
** If the secret requirements were not met earlier
*MP Nu Gundam
**Fin Funnel parts for MP Nu Gundam
*Gunbuster adds Kazumi as a Subpilot
**Gunbuster gains the "Super Inazuma Kick" attack
*Ra Cailum gains the "Nuclear Missile" MAP and ALL attacks

|-
| colspan="3" class="fc-std-sc" |'''第５４話：神に守られし星 Scenario 54 - The Planet Guarded by the Gods'''

|-
| colspan="3" |'''Victory Condition:'''
*1st Part: (1) Defeat all enemies; (2) The SRX Team rescues [https://akurasu.net/wiki/Super_Robot_Wars/Alpha_3/Info_Dump#Finding_Aya_on_Scenario_54 Aya]; (3) Jumora is defeated
*2nd Part: Bemidoban is defeated
'''Defeat Condition:'''
*1st Part: (1)(2) Ally battleship is defeated, Ryusei or Viletta are defeated; (3) Ally battleship is defeated, Ryusei, Viletta, Baran, or Lyria are defeated
*2nd Part: Sanger is defeated
**2nd Part (Touma Route): Touma is defeated
'''Skill Point:''' Clear the map within 10 turns, with both Hermoz defeated '''Secret Requirements:''' '''Unit Acquisition:'''
*Banpreios adds Aya as a Subpilot
**Branpreios gains the "Tenjou Tenge Nendou Musou-ken" attack
**Branpreios and R-GUN Powered gain the "Tenjou Tenge Ichigeki Hissatsu-ho" combination attack
*Shumel (Lyria)
*Bemidoban (Baran)

|-
| colspan="3" class="fc-std-sc" |'''第５５話：まつろわぬ神 Scenario 55 - The God Who Resists Order'''

|-
| colspan="3" |'''Victory Condition:'''
*1st Part: (1) Defeat all enemies; (2) Defeat Gebel GanEden
*2nd Part: (1) Defeat all enemies; (2) Defeat Gebel GanEden
'''Defeat Condition:'''
*1st Part: (1)(2) Ally battleship is defeated
*2nd Part: (1)(2) Ally battleship is defeated
'''Skill Point:''' Within 6 turns, defeat both Zfiruds '''Secret Requirements:''' '''Unit Acquisition:'''

|-
| colspan="3" class="fc-std-sc" |'''第５６話：終わりなき総力戦 Scenario 56 - Unending Total War'''

|-
| colspan="3" |'''Victory Condition:'''
*1st Part: Drowa Zan is defeated within 5 turns
*2nd Part: (1) Soloship move next to the Bairal Jinn; (2) Any unit reaches the designated point
'''Defeat Condition:'''
*1st Part: Ally battleship is defeated, 6th turn is reached
*2nd Part: (1)(2) Ally battleship is defeated
'''Skill Point:''' Clear the map within 7 turns. '''Secret Requirements:'''
*Gije & Ganga Rube
**You must pick the Fight The Buff Clan option at the end of the scenario.
*Bad Ending Route
**On New Game+, choose to fight (first option)
'''Unit Acquisition:'''

|- class="fc-route-h"
| width="40%" |'''Fight The Buff Clan''' Ideon, Getter Robo Combattler V, Voltes V, Daimos Daitarn 3 Gundam (0083, Zeta, ZZ, CCA, Wing, SEED)
| width="40%" |'''Fight The STMC''' Mazinger (Z, Great), Steel Jeeg, Raiden Goshogun, Dancouga, Gaiking Macross (DYRL, Plus, 7) Gunbuster, Evangelion, GaoGaiGar Virtual On
| width="20%" |'''Bad Ending '''

|-
| class="fc-route1" |'''第５７話：憎しみの環の中で Scenario 57 - In a Circle of Hatred'''
| class="fc-route3" |'''第５７話：終わりの始まり Scenario 57 - The Beginning of the End'''
| class="fc-prologue" |'''イデ発動ルート最終話：銀河に君と''' '''Ide Activation Final Scenario - With You In The Galaxy'''

|-
|'''Victory Condition:'''
*1st Part: (1) Defeat all enemies; (2) Soloship reaches the designated point
*2nd Part: Defeat all enemies within (11 (E) / 9 (N) / 7 (H)) turns
'''Defeat Condition:'''
*1st Part: (1)(2) All allies are defeated
*2nd Part: Turn (12 (E) / 10 (N) / 8 (H)) is reached, Ally battleship is defeated
'''Skill Point:''' Defeat all enemies within (10 (E) / 8 (N) / 6 (H)) turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Ganga Rube (Gije)

|'''Victory Condition:''' (1)(2) Defeat all enemies '''Defeat Condition:''' (1) Eltrium is defeated; (2) Ally battleship is defeated '''Skill Point:''' Defeat all enemies within 7 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Eltrium (Tashiro, Deputy Chief)

| rowspan="4" |'''Victory Condition:''' Bairal Jinn is defeated '''Defeat Condition:''' Ally battleship is defeated '''Secret Requirements:''' '''Unit Acquisition:'''

|-
| class="fc-route1" |'''第５８話：発動 Scenario 58 - Activation'''
| class="fc-route3" |'''第５８話：死闘、未来を懸けて Scenario 58 - The Mortal Struggle for the Future'''

|-
|'''Victory Condition:'''
*1st Part: Bairal Jinn is defeated
*2nd Part: Bairal Jinn is defeated
'''Defeat Condition:'''
*1st Part: Ally battleship is defeated
*2nd Part: Ally battleship is defeated
'''Skill Point:''' Destroy the Bairal Jinn within six turns. '''Secret Requirements:''' '''Unit Acquisition:'''

|'''Victory Condition:''' (1)(2) Defeat all enemies '''Defeat Condition:''' (1) Ally battleship is defeated; Drowa Zan is defeated, Ally battleship is defeated(2) '''Skill Point:''' All Buff Clan units survive the stage. '''Secret Requirements:''' '''Unit Acquisition:'''

|}
 

==Stages 59 - END==
{| width="100%"
|-
| colspan="2" class="fc-std-sc" |'''第５９話：果てしなき流れの果てに Scenario 59 - At the End of the Unending Flow'''

|-
| colspan="2" |'''Victory Condition:'''
*1st Part: Reach the 11th turn
*2nd Part: Defeat all enemies, 6th turn is reached
'''Defeat Condition:'''
*1st Part: Ally battleship is defeated, Any enemy enters the designated area
*2nd Part: Any enemy enters the designated area, Ally battleship is defeated, Noriko or Jung are defeated
'''Skill Point:''' Defeat all enemies within 5 turns. '''Secret Requirements:''' '''Unit Acquisition:'''

|- class="fc-route-h"
| width="50%" |'''Normal Ending - 56 Skill Points or less, OR turn count 421 or more'''
| width="50%" |'''Good Ending - 57 Skill Points or more AND turn count 420 or less'''

|-
| class="fc-route1" |'''最終話: 終焉の銀河 Final Scenario - A Galaxy of Death'''
| class="fc-route3" |'''最終話: 今遥か遠い彼方… Final Scenario - Now, The Faraway Yonder'''

|-
|'''Victory Condition:''' (1) ??? is destroyed; (2) Kaiser Ephres is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated '''Secret Requirements:''' '''Unit Acquisition:'''

|'''Victory Condition:''' (1) ??? is destroyed; (2)(3) Kaiser Ephres is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated; (3) Irui is defeated '''Secret Requirements:''' '''Unit Acquisition:'''
*Nashim Gan Eden (Irui)

|}

Super Robot Wars/Alpha 3/Flow Chart

2023-07-06T17:18:42Z

KomodoWork: /* Stages 34 - 44 */ Missing main mecha upgrade from Selena´s route and other info about stage 34 and 35.

Units and Pilots in Black join your team. 
Units and Pilots in Orange are available for that stage, then leave. 
Units and Pilots in Blue have special requirements. Check the [[../Secrets|Secrets]] page for more details. 
Units and Pilots in Red previously joined, but from this point, are rendered unusable. Those lost permanently are marked so, while others rejoin later on. 
Information in Green are upgrades for units already in your party.

==Stages 01 - 18==
{| width="100%"
|- class="fc-route-h"
| width="25%" |'''Touma Route'''
| width="25%" |'''Kusuha Route'''
| width="25%" |'''Cobray Route'''
| width="25%" |'''Selena Route'''

|-
| class="fc-route1" |'''第１話：闘志、炎に燃ゆる Scenario 1 - Within the Flames, Fighting Spirit Rises'''
| class="fc-route2" |'''第１話：出撃！鋼の龍虎 Scenario 1 - Launch! Dragon and Tiger of Steel'''
| class="fc-route3" |'''第１話：虚空からの転生 Scenario 1 - Reincarnated from the Void'''
| class="fc-route4" |'''第１話：シークレット・ミッション Scenario 1 - Secret Mission'''

|-
|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Any allied unit is defeated '''Skill Point:''' Defeat all enemies in 3 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Raioh (Touma)
*GaoGaiGar (Guy)
*Goldymarg (Goldymarg)
*HyoRyu (HyoRyu)
*EnRyu (EnRyu)

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Any allied unit is defeated '''Skill Point:''' Defeat all enemies in 2 turns '''Secret Requirements:'''
*Bullet
**You must be playing as Kusuha to recruit Bullet.
'''Unit Acquisition:'''
*Gouryu Kai (Kusuha)
*Raikou Kai (Bullet)
*Mazinkaiser (Kouji)
*Diana A (Sayaka)
*Shin Getter (Ryoma, Hayato, Benkei)
*Lady Command (Michiru)

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' (1) Werkbau is defeated; (2) Werkbau is defeated, ally battleship is defeated '''Skill Point:''' Defeat all enemies in 5 turns after enemy reinforcements show up '''Secret Requirements:'''
*Arado and Seolla
**You must be playing as Cobray to recruit Arado and Seolla.
'''Unit Acquisition:'''
*Werkbau (Cobray)
*Nu Gundam (Amuro)
*Ra Cailum (Bright, Torres)
*MP Nu Gundam (Kayra)
*Jegan (Katz)
*Incom & Funnel parts for MP Nu Gundam

|'''Victory Condition:''' (1) All enemies except Salamis Kai shot down; (2) R-Gun Powered shot down '''Defeat Condition:''' (1) Selena shot down, Salamis Kai shot down; (2) Selena shot down '''Skill Point:''' Defeat all enemies except the Salamis Kai in 4 turns '''Secret Requirements:'''
*Ibis and Slay
**You must be playing as Selena to recruit Ibis and Slay.
'''Unit Acquisition:'''
*AS Soleares (Selena, Elma)
*Albion (Synapse, Paserov)
*GP03 Dendrobium (Kou)
*GM Cannon II (Keith)
*GM Custom (Burning)
*GM Custom (Bate)
*GM Custom (Monsha)
*GM Cannon II (Adel)
*Zeta Gundam (Kamille)
*Re-GZ BWS (Four)
*Methuss (Fa)
*Super Gundam (Emma)
*Armed Fortress Orchis parts for Gundam Stamen
*G Defensor parts for Gundam Mk-II

|-
| class="fc-route1" |'''第２話: さらばGGG、さらば勇者 Scenario 2 - Farewell, GGG! Farewell, Braves!'''
| class="fc-route2" |'''第２話: 新たなる侵略者！立ち上がれV Scenario 2 - New Invaders! Rise Up, V!'''
| class="fc-route3" |'''第２話: 血の狼煙 Scenario 2 - Beacon Fire of Blood'''
| class="fc-route4" |'''第２話: フラッシュ・デイ Scenario 2 - Flash Day'''

|-
|'''Victory Condition:''' Defeat all enemies; Defeat ZX-01 '''Defeat Condition:''' Any allied unit is defeated '''Skill Point:''' Defeat the 4 Zonders in 2 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*GaoGaiGar (Guy)
*J-Der (J, Tomoro)
*Great Mazinger (Tetsuya)
*Venus A (Jun)
*Boss Borot (Boss, Nuke, Mucha)
*Kotetsu Jeeg (Jeeg)
*Big Shooter (Miwa)

|'''Victory Condition:''' (1) Defeat all enemies, (2) Defeat Dangel '''Defeat Condition:''' (1) Hyouma defeated (2) Any Allied Unit is defeated '''Skill Point:''' Defeat all enemies in 3 turns, do not lose any Federation Army squads '''Secret Requirements:''' '''Unit Acquisition:'''
*Combattler V (Hyoma, Juzo, Daisaku, Chizuru, Kosuke)
*Jegan (Federation Soldier) x 3

|'''Victory Condition:''' (1) Defeat the Magellan Kai-class Battleship (2) Defeat the Magellan Kai-class Battleship and Nuclear Missiles '''Defeat Condition:''' (1) Any ally unit is defeated (2) Nuclear Missiles reach the marked area on the map '''Skill Point:''' Defeat the enemy missiles and battleship in 7 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Clop-class (Federation Captain)
*Wildfalken (Seolla)
*MP Nu Gundam (Cobray)
*ZZ Gundam (Judau)
*Re-GZ BWS (Roux)
*Albion (Synapse, Paserov)
*GP03 Dendrobium (Kou)
*GM Cannon II (Keith)
*GM Custom (Burning)
*GM Custom (Bate)
*GM Custom (Monsha)
*GM Cannon II (Adel)
*Zeta Gundam (Kamille)
*Re-GZ BWS (Four)
*Methuss (Fa)
*Super Gundam (Emma)
*Armed Fortress Orchis parts for Gundam Stamen
*G Defensor Parts for Gundam Mk-II

|'''Victory Condition:''' Defeat any enemy battleship '''Defeat Condition:''' (1) Allied battleship is defeated; (2) Allied battleship is defeated, Selena is defeated '''Skill Point:''' Defeat the enemy battleship in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*ZZ Gundam (Judau)
*Re-GZ BWS (Roux)
*Nu Gundam (Amuro)
*Ra Cailum (Bright)
*Jegan (Katz)
*MP Nu Gundam (Keyra)
*AS Soleares (Selena, Elma)
*Incom & Funnel parts for MP Nu Gundam

|-
| colspan="4" class="fc-std-sc" |'''第３話: 逆襲！機界31原種 Scenario 3 - Counterattack! The 31 Machine Primevals!'''

|-
| colspan="4" |'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' (1) Ally battleship is defeated, One of the Machine Primevals reaches the edge of the map; (2) Ally battleship is defeated, One of the Machine Primevals reaches the edge of the map, J is defeated '''Skill Point:''' Defeat all enemies in 6 turns '''Secret Requirements:''' '''Unit Acquisition (Touma & Kusuha):'''
*J-Ark (J, Tomoro)
*Nu Gundam (Amuro)
*Ra Cailum (Bright, Torres)
*Jegan (Katz)
*MP Nu Gundam (Keyra)
*Albion (Synapse, Paserov)
*GP03 Dendrobium (Kou)
*GM Cannon II (Keith)
*GM Custom (Burning)
*GM Custom (Bate)
*GM Custom (Monsha)
*GM Cannon II (Adel)
*Zeta Gundam (Kamille)
*Re-GZ BWS (Four)
*Methuss (Fa)
*Super Gundam (Emma)
*Incom & Funnel parts for MP Nu Gundam
*Armed Fortress Orchis parts for Gundam Stamen
*G Defensor Parts for Gundam Mk-II
'''Unit Acquisition (Cobray & Selena):'''
*J-Ark (J, Tomoro)
*Mazinkaiser (Kouji)
*Diana A (Sayaka)
*Great Mazinger (Tetsuya)
*Venus A (Jun)
*Combattler V (Hyoma, Juzo, Daisaku, Chizuru, Kosuke)
*Koutetsu Jeeg (Jeeg)
*Big Shooter (Miwa)
*Shin Getter (Ryoma, Hayato, Benkei)
*Lady Command (Michiru)

|-
| colspan="4" class="fc-std-sc" |'''第４話：地獄門、開く Scenario 4 - The Gates of Hell Open'''

|-
| colspan="4" |'''Victory Condition:'''
*1st Part: Allied Battleship reaches the escape point in 5 turns, All Enemies are defeated in 5 turns
*2nd Part: Defeat all enemies
'''Defeat Condition:'''
*1st Part: Allied Battleship is defeated, Turn 6 starts
*2nd Part: SRX is defeated
'''Skill Point:''' Defeat all enemies in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*SRX (Damaged) (Ryuusei, Rai, Aya)

|-
| colspan="4" class="fc-std-sc" |'''第５話: 地球圏絶対防御線 Scenario 5 - The Earth Sphere’s Absolute Defense Line'''

|-
| colspan="4" |'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' (1) Ally battleship is defeated (2) Any allied unit is defeated '''Skill Point:''' Clear the stage in 6 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Moebius Zero (Mwu)
*All Char's Counter Attack, Stardust Memory, and Zeta Gundam units are lost <ul><li>Nu Gundam(Amuro)</li><li>Ra Cailum (Bright, Torres)</li><li>MP Nu Gundam (Keyra)</li><li>Albion (Synapse, Paserov)</li><li>GP03 Dendrobium (Kou)</li><li>GM Cannon II (Keith)</li><li>GM Custom (Burning)</li><li>GM Custom (Bate)</li><li>GM Custom (Monsha)</li><li>GM Cannon II (Adel)</li><li>Zeta Gundam (Kamille)</li><li>Re-GZ BWS (Four)</li><li>Methuss (Fa)</li><li>Super Gundam (Emma)</li><li>Jegan (Katz)</li></ul>

|- class="fc-route-h"
|'''Touma Route''' Great Mazinger, Venus A, Boss Borot Steel Jeeg, Big Shooter
|'''Kusuha Route''' Getter Robo G, Lady Command Mazinger Z, Diana A Combattler V
|'''Cobray Route''' ZZ Gundam, ReGZ (BWS) Moebius Zero
|'''Selena Route'''
|-
| class="fc-route1" |'''第６話：平和、遥か遠く Scenario 6 - A Faraway Peace'''
| class="fc-route2" |'''第６話：北米戦線、異常アリ Scenario 6 - Abnormalities on the North American Front'''
| class="fc-route3" |'''第６話：GUNDAM出撃 Scenario 6 - Gundam, Sortie'''
| class="fc-route4" |'''第６話：ザ・ビギニング Scenario 6 - The Beginning'''

|-
|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Any ally is defeated '''Skill Point:''' Defeat all enemies in 5 turns; Defeat the Yamata no Orochi last '''Secret Requirements:''' '''Unit Acquisition:'''
*GaiGar (Gai)
*Mic Sounders XIII (Mic Sounders XIII)

|'''Victory Condition:''' (1) Ally reaches the designated area; (2) Defeat all enemies '''Defeat Condition:''' Any ally defeated '''Skill Point:''' Reach target location without engaging in combat '''Secret Requirements:''' '''Unit Acquisition:'''
*Mazinkaiser → Mazinger Z (Kouji)
*Shin Getter Robo → Getter Robo G (Ryoma, Hayato, Benkei) 
*Dancouga (Shinobu, Sara, Masato, Ryo)

|'''Victory Condition:'''
*1st Part: Sigu is defeated, Vesalius is defeated
*2nd Part: Defeat all enemies 
'''Defeat Condition:'''
*1st Part: Any ally is defeated
*2nd Part: Any ally is defeated 
'''Skill Point:''' Accomplish either objective in 4 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Clop Class Battleship (Federation Officer)
*Wing Gundam Zero (Heero)
*Gundam Deathscythe Hell (Duo)
*Gundam Sandrock Kai (Quatre)
*Taurus (Hilde)
*Strike Gundam (Kira)

|'''Victory Condition:''' (1) AS Soleares reaches the designated point in 4 turns; (2) Defeat all enemies '''Defeat Condition:''' (1) Begin turn 5 without meeting victory conditions, Any ally is defeated; (2) Any ally is defeated '''Skill Point:''' Defeat all enemies in 4 turns and get the AS Soleares to the target square '''Secret Requirements:''' '''Unit Acquisition:'''
*CGUE (Rau)
*GINN (ZAFT Soldier) x 2
*Vesarius (Ades)

|-
| class="fc-route1" |'''第７話：燃えろ宙！妖花フローラの挑戦 Scenario 7 - Space Burns! The Enchanting Flora’s Challenge!'''
| class="fc-route2" |'''第７話：怒りの獣、野生の咆哮 Scenario 7 - The Wild Roar of the Raging Beast'''
| class="fc-route3" |'''第７話：崩壊の大地 Scenario 7 - Collapsing Land'''
| class="fc-route4" |'''第７話：ワンズ・ジャスティス Scenario 7 - One’s Own Justice'''

|-
|'''Victory Condition:''' 
*1st Part: Defeat all enemies
*2nd Part: Defeat all enemies
'''Defeat Condition:''' 
*1st Part: Any ally defeated
*2nd Part: Any ally defeated
'''Skill Point:''' Defeat all enemies in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*AnRyu (AnRyu)
*KouRyu (KouRyu)

|'''Victory Condition:''' (1) Defeat all enemies; (2) Defeat Dangel '''Defeat Condition:''' Any ally is defeated '''Skill Point:''' Defeat all Zubanzas, Boazan Flying Saucers, and Red Baloms within 4 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Black Wing (Alan)

|'''Victory Condition:''' (1) Defeat all enemies; (2) Archangel reaches the designated point, Defeat all enemies '''Defeat Condition:''' (1) Mwu is defeated; (2) Ally battleship is defeated, Kira or Mwu are defeated '''Skill Point:''' Defeat all enemies in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Strike Gundam (Kira)
*Archangel (Murrue, Natarle)
*Aile, Sword and Launcher Striker packs for Strike Gundam

|'''Victory Condition:''' Any ally reaches the designated point '''Defeat Condition:''' Any ally is defeated '''Skill Point:''' Defeat all enemies in 5 turns and get an allied unit to the target square '''Secret Requirements:''' '''Unit Acquisition:'''
*Gundam Heavyarms Kai (Trowa)
*Altron Gundam (Wufei)
*CGuE (Rau)
*Vesarius (Ades)
*Aegis Gundam (Athrun)
*Blitz Gundam (Nicol)
*Buster Gundam (Dearka)
*Duel Gundam (Yzak)

|-
| class="fc-route1" |'''第８話：立ち上がれ！勇気ある者達 Scenario 8 - Stand Up, People of Courage!'''
| class="fc-route2" |'''第８話：輝け！不死身の勇者 Scenario 8 - Shine, Undying Hero!'''
| class="fc-route3" |'''第８話：誘う声 Scenario 8 - An Inviting Voice'''
| class="fc-route4" |'''第８話：インビジブル・イントルーダー Scenario 8 - Invisible Intruder'''

|-
|'''Victory Condition:''' (1) Defeat all enemies; (2) ZX-02 is defeated '''Defeat Condition:''' (1) Any ally is defeated; (2) Gai is defeated, J is defeated '''Skill Point:''' Defeat all enemies in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*GaiGar → GaoGaiGar
*Mic Sounders XIII gains "Disc P", "Disc M", and "Disc X" attacks
*Goldymarg (Goldymarg)
*HyoRyu (HyoRyu)
*EnRyu (EnRyu)
*Big Volfogg (Big Volfogg)

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' (1) Any ally is defeated; (2) Akira is defeated '''Skill Point:''' Defeat the Bramble (retreats at 4000HP (E) / 6000HP (N) / 8000HP (H)) '''Secret Requirements:''' '''Unit Acquisition:'''
*Raideen (Akira)
*Bluegar (Jinguji, Mari)

|'''Victory Condition:'''
*1st Part: (1) Vesalius is defeated; (2) Defeat all enemies
*2nd Part: (1) Defeat all enemies; (2) Defeat all enemies except Valk Baal 
'''Defeat Condition:'''
*1st Part: Ally battleship is defeated, Seolla or Cobray are defeated
*2nd Part: Any ally is defeated 
'''Skill Point:''' Defeat Aegis, Duel, Buster, and Blitz Gundams in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Zeta Gundam (Kamille)
*Re-GZ BWS (Four)
*Methuss (Fa)
*Super Gundam (Emma)
*Ra Cailum (Bright, Torres)
*MP Nu Gundam (Cobray)
*Werkbau (Cobray)
*G Defensor parts for Gundam Mk-II

|'''Victory Condition:''' Reach turn 6 '''Defeat Condition:''' Any ally is defeated '''Skill Point:''' Defeat all the Jegans '''Secret Requirements:''' '''Unit Acquisition:'''
*CGuE (Rau)
*Vesarius (Ades)
*Aegis Gundam (Athrun)
*Blitz Gundam (Nicol)
*Buster Gundam (Dearka)
*Duel Gundam (Yzak)

|-
| class="fc-route1" |'''第９話：内なる修羅 Scenario 9 - Demons of War Within'''
| class="fc-route2" |'''第９話：再会！ニューヨーク解放戦 Scenario 9 - Reunion! The Battle to Retake New York'''
| class="fc-route3" |'''第９話：正義の在処 Scenario 9 - Where Justice Can Be Found'''
| class="fc-route4" |'''第９話：アベンジャー Scenario 9 - Avenger'''

|-
|'''Victory Condition:''' (1) Defeat all enemies; (2) Defeat Raioh '''Defeat Condition:''' (1) Any ally defeated; (2) Sanger is defeated '''Skill Point:''' Defeat the Bramble in 4 turns (retreats at 4000HP (E) / 6000HP (N) / 8000HP (H)) '''Secret Requirements:''' '''Unit Acquisition:'''
*Dygenguar (Sanger)
*Huckebein Mk-III Trombe (Ratsel)
*Raideen (Akira)
*Bluegar (Jingunji, Mari)
*Mazinger Z (Kouji)
**Mazinger Z (Kouji) and Great Mazinger (Tetsuya) gain the "Double Mazinger Blade" and "Double Burning Fire" combination attacks
*Diana A (Sayaka)
*Getter Robo G (Ryoma, Hayato, Benkei)
*Lady Command (Michiru)
*Combattler V (Hyoma, Juzo, Daisaku, Chizuru, Kosuke)

|'''Victory Condition:''' (1) Defeat all enemies; (2) Dancouga reaches the designated point; (3) Defeated Deathgaia, Dangel, and Warchamedes '''Defeat Condition:''' (1) Shinobu, Kusuha, or Bullet are defeated; (2) Shinobu, Kusuha, Bullet, or Alan are defeated; (3) Alan is defeated '''Skill Point:''' Clear the map in 8 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Black Wing (Alan)
*Dygenguar (Sanger)
*Huckebein Mk-III Trombe (Ratsel)

|'''Victory Condition:''' (1) Vesalius is defeated; Reduce the Muge Battleship under 2000 HP before it reaches the edge of the map '''Defeat Condition:''' (1) Ally battleship is defeated; (2) Muge Battleship reaches the western edge of the map '''Skill Point:''' Defeat all enemies before reducing the Muge Mothership's HP below 2000 or defeating it '''Secret Requirements:''' '''Unit Acquisition:'''

|'''Victory Condition:''' (1) Reduce the Archangel's HP to 50% or less, Defeat all enemies besides the Archangel; (2) Reduce the Varuch Ishar to 4000 HP or less. '''Defeat Condition:''' Any ally is defeated '''Skill Point:''' Defeat the Varuch Ishar (flees at 4000 HP) '''Secret Requirements:''' '''Unit Acquisition:'''
*CGuE (Rau)
*Vesarius (Ades)
*Aegis Gundam (Athrun)
*Blitz Gundam (Nicol)
*Buster Gundam (Dearka)
*Duel Gundam (Yzak)

|-
| class="fc-route1" |'''第１０話：激震の地底帝国 Scenario 10 - Tremors in the Underground Empire'''
| class="fc-route2" |'''第１０話：龍を喰らうもの Scenario 10 - That Which Devours the Dragon'''
| class="fc-route3" |'''第１０話：消えていく光 Scenario 10 - The Fading Light'''
| class="fc-route4" |'''第１０話：グッバイ・フレンズ Scenario 10 - Goodbye, Friends'''

|-
|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' All allies defeated, Science Fortress Lab destroyed '''Skill Point:''' Clear the map without the Science Fortress Lab taking damage '''Secret Requirements:''' '''Unit Acquisition:'''
*Raioh loses the "System LIOH" ability
*Raioh gains the "Rising Meteor" attack
*Dygenguar (Sanger)
*Huckebein Mk-III Trombe (Ratsel)

|'''Victory Condition:''' (1) Sanger is defeated; (2)(3) Defeat all enemies; (4)(5) ZX-02 is defeated '''Defeat Condition:''' (1) Bullet is defeated; (2) Sanger or Rastel are defeated; (3) Any ally is defeated; (4) Guy, Sanger, or Rastel are defeated; (5) Guy, J, Sanger, or Rastel are defeated '''Skill Point:''' Reduce Shin RyuOuKi to below 10000 HP within 3 turns of its arrival '''Secret Requirements:''' '''Unit Acquisition:'''
*Dygenguar (Sanger)
*Huckebein Mk-III Trombe (Ratsel)
*GaiGar (Guy)
*GaoGaiGar (Guy)
*Mic Sounders XIII (Mic Sounders XIII)
*Goldymarg (Goldymarg)
*HyoRyu (HyoRyu)
*EnRyu (Enryu)
*Volfogg (Volfogg)
*Great Mazinger (Tetsuya)
*Venus A (Jun)
*Boss Borot (Boss, Mucha, Nuke)
*Kotetsu Jeeg (Jeeg)
*Big Shooter (Miwa)
*Stealth Gao II parts for GaoGaiGar
*Gunbot parts for Volfogg

|'''Victory Condition:''' (1) Reduce the Blitz Gundam to under 7000HP; (2) The Gamow is defeated; (3) The Gamow is defeated and Imperial Guard are defeated '''Defeat Condition:''' (1)(2) Any ally is defeated; (3) Ally battleship is defeated '''Skill Point:''' Defeat the Gamow (retreats at 4000HP (E) / 6000HP (N) / 8000HP (H)) '''Secret Requirements:''' '''Unit Acquisition:'''
*Qubeley Mk-II (Puru)
*Qubeley Mk-II (Puru Two)
*Hyaku Shiki (Beecha)
*Gundam Mk-II (Elle)
*Jegan (Mondo)
*Megarider (Iino)
*YF-19 (Isamu)
*YF-21 (Guld)

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' (1) Any ally is defeated; (2) Ally battleship is defeated; (3) Ally battleship is defeated, Isamu or Guld are defeated '''Skill Point:''' Clear the map in 6 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Zeta Gundam (Kamille)
*Methuss (Fa)
*ReGZ (Four)
*Super Gundam (Emma)
*Archangel (Murrue, Natarle)
*Strike Gundam (Kira)
*Moebius Zero (Mwu)
*Aile, Sword, and Launcher Striker packs for Strike Gundam
*Wing Gundam Zero (Heero)
*Gundam Deathscythe Hell (Duo)
*Gundam Sandrock Kai (Quatre)
*Taurus (Hilde)
*ZZ Gundam (Judau)
*ReGZ BWS (Roux)
*Qubeley Mk-II (Puru)
*Qubeley Mk-II (Puru Two)
*Hyaku Shiki (Beecha)
*Gundam Mk-II (Elle)
*Jegan (Mondo)
*Megarider (Iino)
*YF-19 (Isamu)
*YF-21 (Guld)

|-
| class="fc-route1" |'''第１１話：戦場の邂合、そして決別 Scenario 11 - An Battlefield Encounter, and Then a Departure'''
| class="fc-route2" |'''第１１話：新たなる人類 Scenario 11 - A New Mankind'''
| class="fc-route3" |'''第１１話：君と戦場で Scenario 11 - On the Battlefield with You'''
| class="fc-route4" |'''第１１話：パワー・ジャンクション Scenario 11 - Power Junction'''

|-
|'''Victory Condition:''' (1) Defeat all enemies; (2) Defeat Vesalius '''Defeat Condition:''' Ally battleship is defeated, Kira or Mwu are defeated '''Skill Point:''' Defeat all enemies in 7 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Archangel (Murrue, Natarle)
*Strike Gundam (Kira)
*Moebius Zero (Mwu)
*Stealth Gao II Parts for GaoGaiGar
*Aile, Sword, and Launcher Striker packs for Strike Gundam

|'''Victory Condition:''' (1) Defeat all enemies; (2) Vesalius is defeated '''Defeat Condition:''' (1) Ally battleship is defeated, Kira or Mwu are defeated; (2) Ally battleship is defeated '''Skill Point:''' Defeat all enemies in 7 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Strike Gundam (Kira)
*Moebius Zero (Mwu)
*Archangel (Murrue, Natarle)
*YF-19 (Isamu)
*YF-21 (Guld)
*Aile, Sword, and Launcher Striker packs for Strike Gundam

|'''Victory Condition:''' (1) Defeat all enemies (2) ZX-02 is defeated '''Defeat Condition:''' (1) Kira is defeated; (2) Any ally is defeated '''Skill Point:''' Defeat all enemies in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Wildburger (Arado)
*Great Mazinger (Tetsuya)
*Venus A (Jun)
*Boss Borot (Boss)
*Dancouga (Shinobu, Sarah, Masato, Ryo)
*Raideen (Akira)
*Bluegar (Jingunji)
*Mazinger Z (Kouji)
*Diana A (Sayaka)
*Getter Robo G (Ryoma, Hayato, Benkei)
*Lady Command (Michiru)
*Star Gaogaigar (Gai)
*Goldymarg (Goldymarg)
*Mic Sounders the 13th (Mic)
*Hyoryu (Hyoryu)
*Enryu (Enryu
*Big Volfogg (Volfogg)

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Defeat all enemies in 7 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Ra Cailum (Bright, Torres)
*Great Mazinger (Tetsuya)
*Venus A (Jun)
*Boss Borot (Boss)
*Dancouga (Shinobu, Sarah, Masato, Ryo)
*Raideen (Akira)
*Bluegar (Jingunji)
*Mazinger Z (Kouji)
*Diana A (Sayaka)
*Getter Robo G (Ryoma, Hayato, Benkei)
*Lady Command (Michiru)
*Star Gaogaigar (Gai)
*Goldymarg (Goldymarg)
*Mic Sounders the 13th (Mic)
*Hyoryu (Hyoryu)
*Enryu (Enryu
*Big Volfogg (Volfogg)

|-
| class="fc-route1" |'''第１２話：守るべきモノ Scenario 12 - What You Must Protect'''
| class="fc-route2" |'''第１２話：別れの宇宙 Scenario 12 - Farewells in Space'''
| class="fc-route3" |'''第１２話：ディーンの火 Scenario 12 - The Flames of Deen'''
| class="fc-route4" |'''第１２話：コンクルージョン Scenario 12 - Conclusion'''

|-
|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' All enemies defeated '''Skill Point:''' Defeat all enemies in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Wing Gundam Zero (Heero)
*Gundam Deathscythe Hell (Duo)
*Gundam Sandrock Kai (Quatre)
*Gundam Heavyarms Kai (Trowa)
*Altron Gundam (Wufei)
*Taurus (Hilde)
*Zeta Gundam (Kamille)
*Re-GZ BWS (Four)
*Methuss (Fa)
*Gundam Mk-II (Emma)
*ZZ Gundam (Judau)
*Qubeley Mk-II (Puru)
*Qubeley Mk-II (Puru Two)
*Hyaku Shiki (Beecha)
*Gundam Mk-II (Elle)
*Jegan (Mondo)
*Megarider (Iino)
*YF-19 (Isamu) (After stage)
*YF-21 (Guld) (After stage)
*G Defensor parts for Gundam Mk-II

|'''Victory Condition:''' (1) Defeat all enemies; (2) Defeat Shin RyoOhKi; (3) Defeat the Imperial Guard '''Defeat Condition:''' (1)(2) Any ally is defeated; (3) Ally battleship is defeated '''Skill Point:''' Defeat Shin RyuOhKi before Victory Conditions are met '''Secret Requirements:''' '''Unit Acquisition:'''
*Wing Gundam Zero (Heero)
*Gundam Deathscythe Hell (Duo)
*Gundam Sandrock Kai (Quatre)
*Gundam Heavyarms Kai (Trowa)
*Altron Gundam (Wufei)
*Taurus (Hilde)
*Zeta Gundam (Kamille)
*Re-GZ BWS (Four)
*Methuss (Fa)
*Gundam Mk-II (Emma)
*ZZ Gundam (Judau)
*Qubeley Mk-II (Puru)
*Qubeley Mk-II (Puru Two)
*Hyaku Shiki (Beecha)
*Gundam Mk-II (Elle)
*Jegan (Mondo)
*Megarider (Iino)
*G Defensor parts for Gundam Mk-II

|'''Victory Condition:''' (1) Bramble, Magnum, and Zangaioh are defeated; (2) Defeat all enemies; (3) Defeat Valk Baal '''Defeat Condition:''' (1) Ally battleship is defeated, Arado is defeated; (2) Cobray, Arado or Seolla are defeated; (3) Cobray, Viletta, Sanger, or Rastel are defeated '''Skill Point:''' Clear the map in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Werkbau gains the "Axion Buster" attack
*Gundam Heavyarms Kai (Trowa)
*Altron Gundam (Wufei)
*Dygenguar (Sanger)
*Huckebein Mk-III Trombe (Ratsel)
*R-GUN Powered (Viletta)

|'''Victory Condition:''' (1)(2) ZX-08 is defeated; (3) Varuch Ishar is defeated '''Defeat Condition:''' (1) Ally battleship is defeated, (2) Ally battleship is defeated, J is defeated; (3) Ally battleships is defeated, Selena, Viletta, Sanger, or Rastel are defeated '''Skill Point:''' Defeat ZX-02 in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*J-ARK (J, Tomoro)
*R-GUN Powered (Viletta)
*Dygenguar (Sanger)
*Huckebein Mk-III Trombe (Ratsel)
*Vegalion (Slay)

|-
| colspan="4" class="fc-std-sc" |'''第１３話：もう一度、自らの足で Scenario 13 - Once Again, On Your Feet'''

|-
| colspan="4" |'''Victory Condition:''' ZX-06 is defeated '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Clear the map in 6 turns; Defeat all other enemies before ZX-06 '''Secret Requirements:''' '''Unit Acquisition:'''
*Evangelion Unit 0 Custom (Rei)
*Evangelion Unit 1 (Shinji)
*Evangelion Unit 2 (Asuka)

|-
| colspan="4" class="fc-std-sc" |'''第１４話：オペレーション・ハルパー Scenario 14 - Operation Harper'''

|-
| colspan="4" |'''Victory Condition:''' Reduce Hermoz Ehad's HP to below 120000HP (E) / 90000HP (N) / 80000HP (H) '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Achieve the victory condition in 7 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*HyoRyu (HyoRyu)
*EnRyu (EnRyu)

|-
| colspan="4" class="fc-std-sc" |'''第１５話：遥かなる凱歌 Scenario 15 - A Faroff Victory Song'''

|-
| colspan="4" |'''Victory Condition:''' Defeat the Combine Primeval '''Defeat Condition:''' Ally Battleship is defeated, J is defeated '''Skill Point:''' Defeat all enemies in 7 turns, leaving the combined Primeval for last '''Secret Requirements:''' '''Unit Acquisition:'''
*J-Ark (J, Tomoro)
*ALL units are unavailable until clearing Scenario 18

|-
| colspan="4" class="fc-std-sc" |'''第１６話：導かれる魂、銀河で Scenario 16 - Souls Guided by the Galaxy'''

|-
| colspan="4" |'''Victory Condition:'''
*1st Part: Defeat all enemies
*2nd Part: Defeat all enemies
'''Defeat Condition:'''
*1st Part: Ideon is defeated
*2nd Part: Any ally is defeated
'''Skill Point:''' Defeat all enemies in 4 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Ideon (Cosmo, Kasha, Bess → Moera)
*VF-17S Nightmare (Kinryu)
*VF-17D Nightmare (Gamlin)
*VF-17D Nightmare (Docker)
*Battle 7 (Max, Exedore, Miho, Sally)
*Soloship (Bess)

|-
| colspan="4" class="fc-std-sc" |'''第１７話：ディスコード・ハーモニー Scenario 17 - Discord / Harmony'''

|-
| colspan="4" |'''Victory Condition:''' (1)(2) Defeat the Zig Mac; (3) Defeat FZ-109F Elgarthorn '''Defeat Condition:''' (1) Any ally is defeated; (2) Any ally is defeated, Zig Mac moves next to the Soloship (3) '''Skill Point:''' Meet victory the condition in 4 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Battle 7 can now transform into "Enhanced Attack Mode"
*VF-17D Nightmare (Docker)

|-
| colspan="4" class="fc-std-sc" |'''第１８話：銀河流浪 Scenario 18 - Galactic Wandering'''

|-
| colspan="4" |'''Victory Condition:'''
*1st Part: Defeat FZ-109F Elgarthorn
*2nd Part: Defeat Zig Mac
'''Defeat Condition:'''
*1st Part: Any ally is defeated
*2nd Part: Any ally is defeated
'''Skill Point:''' Meet victory conditions in 3 turns '''Secret Requirements:'''
*Duel Gundam
**Take the Earth Route
*VF-1J S Valkyrie
**Take the Earth Route
*LaGOWE
**Take the Earth Route
'''Unit Acquisition:'''
*VF-17D Nightmare (Physica)
*VF-17S (Kinryu), VF-17D (Gamlin), and VF-17D (Physica) gain the "Diamond Force Attack" combination Attack
*Ideon gains the "Omnidirectional Missile" attack
*All Ideon and Macross 7 units are lost <ul><li>Ideon (Cosmo, Kasha, Moera)</li><li>Soloship (Bess)</li><li>Battle 7 (Max, Exedore, Miho, Sally)</li><li>VF-17S Nightmare (Kinryu)</li><li>VF-17D Nightmare (Physica)</li><li>VF-17D Nightmare (Gamlin)</li>

|}
 

==Stages 19 - 33==
{| width="100%"
|- class="fc-route-h"
| width="50%" |'''Descend to Earth''' Gundam 0083 Gundam Z ZZ Gundam Char's CounterAttack Gundam Wing Gundam SEED Macross 7 Macross Plus Evangelion
| width="50%" |'''Mount a Lunar offensive''' GaoGaiGar Ideon Mazinger (Z, Great) Getter Robo Steel Jeeg Combattler V Gaiking Raideen Dancouga GoShogun

|-
| class="fc-route1" |'''第１９話：宇宙に降る星 Scenario 19 - Stars Falling in Space'''
| class="fc-route3" |'''第１９話：悪夢への招待状 Scenario 19 - A Written Invitation to a Nightmare'''

|-
|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated, Kira is defeated '''Skill Point:''' Destroy all enemies in 6 turns '''Secret Requirements:'''
*Duel Gundam
**Destroy Yzak.
'''Unit Acquisition:'''
*Nu Gundam (Amuro)
*Jegan (Katz)
*MP Nu Gundam (Kayra)
*Incom and Fin Funnel parts for MP Nu Gundam
*Kira unlocks the SEED pilot skill
*Skygrasper
*Ra Cailum (Bright, Torres)

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Destroy the Muge battleship in 6 turns (retreats at 6000HP (E) / 8000HP (N) / 10000 HP (H)) '''Secret Requirements:''' 
'''Unit Acquisition:'''
*Daiku Maryu (Pete, Midori)
*Gaiking (Sanshiro)
*Skylar (Fan Li)
*Bazolar (Yamagatake)
*Nesser (Bunta)

|-
| class="fc-route1" |'''第２０話：強襲、砂漠の虎 Scenario 20 - Assault of the Desert Tiger'''
| class="fc-route3" |'''第２０話：異邦人達の帰還 Scenario 20 - The Foreigners Return'''

|-
|'''Victory Condition:''' Defeat the Lesseps '''Defeat Condition:''' Ally battleship is defeated, Kira is defeated '''Skill Point:''' Defeat the Lesseps in 6 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Kira unlocks the SEED pilot skill
*Albion (Synapse, Paserov)
*Gundam Stamen (Kou)
*GM Cannon II (Keith)
*GM Custom (Burning)
*GM Custom (Bate)
*GM Custom (Monsha)
*GM Cannon II (Adel)
*Gundam GP01fb
*Armed Base Orchis parts for Gundam Stamen

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Destroy Helmut's Muge battleship in 4 turns (retreats at 6000HP (E) / 8000HP (N) / 10000 HP(H)) '''Secret Requirements:''' '''Unit Acquisition:'''
*Ideon (Cosmo, Kasha, Moera)
*Ideon gains the "Ideon Sword" and "Ideon Sword (MAP)" attacks
*Soloship (Bess, Hatari)

|-
| class="fc-route1" |'''第２１話：プリティ・デビル Scenario 21 - Pretty Devil'''
| class="fc-route3" |'''第２１話：裏切りの代償 Scenario 21 - The Cost of Betrayal'''

|-
|'''Victory Condition:'''
*1st Part: Gigil's ship is defeated
*2nd Part: Gigil's ship is defeated 
'''Defeat Condition:'''
*1st Part: Any ally is defeated
*2nd Part: Basara is defeated
'''Skill Point:''' Destroy Gigil before he moves adjacent to Sivil '''Secret Requirements:'''
*LaGOWE
**Waltfeld and Dacosta must both survive and get a combined total of 10 kills or more on the first half of the scenario.
*VF-1J
**Milia must get a total of 10 kills in the first half of the scenario.
'''Unit Acquisition:'''
*VF-17S Nightmare (Kinryu)
*VF-17D Nightmare (Gamlin)
*VF-17D Nightmare (Physica)
*VF-1J S Valkyrie (Milia)
*LaGOWE (Waldfelt)
*BuCUE (Dacosta)
*Skygrasper (Cagalli)
*VF-19 Kai Fire Valkyrie (Basara)
*VF-17S Nighmare (Milia)
*VF-1J S Valkyrie

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Any ally is defeated '''Skill Point:''' Destroy all enemies in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Goshogun (Shingo, Killy, Remi)
*Good Thunder (Sabranth)

|-
| class="fc-route1" |'''第２２話：砂塵の果て Scenario 22 - Beyond the Clouds of Sand'''
| class="fc-route3" |'''第２２話：発動する力、無限大 Scenario 22 - Infinite Activation Power'''

|-
|'''Victory Condition:''' (1) Defeat the Lesseps; (2) Waltfeld is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated '''Skill Point:''' Defeat the Lesseps in 5 turns '''Secret Requirements:'''
*LaGOWE
**Kira must destroy Waltfeld's LaGOWE while in SEED. (Kira has to activate SEED mode before the event that ends the stage.)
'''Unit Acquisition:'''
*Kira unlocks the SEED pilot skill

|'''Victory Condition:''' (1) Soloship reaches the computer facility; (2) Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Get the Soloship to the indicated area in 4 turns without it taking any damage '''Secret Requirements:''' '''Unit Acquisition:'''
*HyoRyu (HyoRyu)
*EnRyu (EnRyu)

|-
| class="fc-route1" |'''第２３話：エモーション・ハイ Scenario 23 - Emotion High'''
| class="fc-route3" |'''第２３話：決戦！地獄の月荒野 Scenario 23 - Decisive Battle in the Hellish Lunar Wilderness!'''

|-
|'''Victory Condition:''' (1) Defeat 2 Ghosts; (2) Defeat all enemies; (3) Basara sings to Sivil, All ZAFT forces are defeated '''Defeat Condition:''' (1) Ally battleship is defeated, Battle 7 is defeated; (2) Ally battleship is defeated, Battle 7 is defeated, Isamu or Guld are defeated; (3) Ally battleship is defeated, Isamu, Guld, or Basara are defeated '''Skill Point:''' Clear the map in 9 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*YF-19's "Full Volley" attacks gains +200 Attack power
*YF-19 and YF-21 gain the "Double Pinpoint Barrier Punch" combination attack
*Battle 7 (Max, Exedore, Miho, Sally)
*VF-19 Kai Fire Valkyrie (Basara)
*Mazinkaiser
*Shin Getter Robo

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Clear the map in 9 turns '''Secret Requirements:''' '''Unit Acquisition:'''

|-
| colspan="2" class="fc-std-sc" |'''第２４話：戦神の星で Scenario 24 - On the Planet of the War God'''

|-
| colspan="2" |'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' (1) Any ally is defeated; (2) Ally battleship is defeated '''Skill Point:''' Destroy all enemies in 3 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*VF-19 Kai Fire Valkyrie (Basara)
*VF-11 MAXL Kai (Mylene)
*VF-17 Kai Nightmare (Ray, Veffidas)
*Tallgeese III (Zechs)
*Taurus (Noin)
*Voltes V (Kenichi, Ippei, Daijiroh, Hiyoshi, Megumi)
*Daimos (Kazuya)
*Garuba FX-II (Kyoshiro, Nana)

|-
| colspan="2" class="fc-std-sc" |'''第２５話：選ばれし者、選びし者 Scenario 25 - Those Who Are Chosen, Those Who Choose'''

|-
| colspan="2" |'''Victory Condition:''' (1) Hermos is defeated; (2) Zifrud is defeated '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Clear the map in 8 turns '''Secret Requirements:''' '''Unit Acquisition:'''

|-
| colspan="2" class="fc-std-sc" |'''第２６話：かりそめの旅人 Scenario 26 - Transitory Traveler'''

|-
| colspan="2" |'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated, Temjin, Fei Yen, or Apharmd are defeated '''Skill Point:''' Destroy all enemies in 3 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Temjin 747J (Chief)
*Fei Yen the Knight (Fei)
*Apharmd The Hatter (The Hatter)

|-
| colspan="2" class="fc-std-sc" |'''第２７話：勇気ある者達の誓い Scenario 27 - The Oath of the Courageous'''

|-
| colspan="2" |'''Victory Condition:'''
*1st Part: Defeat all enemies
*2nd Part: (1) Defeat all enemies; (2) Defeat the Z-Master within (10 (E) / 7 (N) / 5 (H)) turns 
'''Defeat Condition:'''
*1st Part: Ally battleship is defeated, Gai is defeated
*2nd Part: (1) Ally battleship is defeated, Gai or J are defeated; (2) (10 (E) / 7 (N) / 5 (H)) turns have passed, Ally battleship is defeated, Gai or J are defeated 
'''Skill Point:''' Destroy all enemies in 7 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*J-Ark (J, Tomoro)

|-
| colspan="2" class="fc-std-sc" |'''第２８話：いつか星の海へ Scenario 28 - Someday, In the Sea of Stars'''

|-
| colspan="2" |'''Victory Condition:''' (1)(2) Defeat the Zonder Robo; (3) Defeat the Zonder Robo within 6 attacks from Star GaoGaiGar; (4)(5) Defeat all enemies '''Defeat Condition:''' (1) Galeon is defeated; (2) Ally battleship is defeated, Galeon is defeated; (3) Ally battleship or Gai are defeated, Zonder Robo is not defeated within 6 attacks from Star GaoGaiGar (4) Main Character is defeated; (5) Ally battleship is defeated '''Skill Point:''' Destroy the Zonuder Robo in 5 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Galeon (Galeon)
*Star GaoGaiGar/GaoGaiGar (Gai)
*YF-19 (Isamu)
*YF-21 (Guld)
*Battle 7 (Max)
*VF-17S Nightmare (Milia)
*VF-17D Nightmare (Gamlin)
*VF-17D Nightmare (Physica)
*VF-19 Kai Fire Valkyrie (Basara)
*VF-11 MAXL Kai (Mylene)
*VF-17 Kai Nightmare (Ray, Veffidas)
*HyoRyu (HyoRyu)
*EnRyu (EnRyu)
*Goldymarg (Goldymarg)
*Volfogg (Volfogg)
*Mic Sounders XIII (Mic Sounder XIII)
*Ideon (Cosmo, Kasha, Moera)
*Soloship (Bess, Hatari)
*Star GaoGaiGar (Guy, Choryujin, Goldymarg, Mic, Volfogg)
*Dygenguar (Sanger)
*Aussenseiter (Ratsel)
*R-Blade Custom (Ryusei)
*R-Gun Powered (Viletta)

|-
| colspan="2" class="fc-std-sc" |'''第２９話：押された烙印 Scenario 29 - Branded with the Mark'''

|-
| colspan="2" |'''Victory Condition:''' (1)(2) Defeat all enemies '''Defeat Condition:''' (1) Ally battleship is defeated; (2) Ally battleship is defeated, Cagalli is defeated '''Skill Point:''' Destroy all enemies in 6 turns '''Secret Requirements:'''
*Destroid Monster
**Take the Space Route
*FBz-99G
**Take the Space Route
*Strike Rouge IWSP
**Cagalli must have 30 or more kills by the end of this stage.
***Take the Alaska Route
*Duel Gundam
**Take the Alaska Route
'''Unit Acquisition:'''
*GaoFighGar (Guy)
*HyoRyu (HyoRyu)
*EnRyu (EnRyu)
*Goldymarg (Goldymarg)
*Volfogg (Volfogg)/Big Volfogg (Big Volfogg)
*Mic Sounders XIII (Mic Sounders XIII)
*AnRyu (AnRyu)
*KouRyu (KouRyu)
*Ra Cailum (Bright, Torres)

|- class="fc-route-h"
|'''Head to Alaska''' Gundam (0083, Z, ZZ, CCA, Wing, SEED) Daitarn 3 Mazinger (Z, Great) Steel Jeeg Voltes V Daimos Dancouga Evangelion
|'''Go to Space''' GaoGaiGar Ideon Getter Robo Combattler V GaiKing Raideen Goshogun Macross (DYRL, 7, Plus) Virtual On

|-
| class="fc-route2" |'''第３０話：終わらない閃光 Scenario 30 - Unending Flashes of Light'''
| class="fc-route4" |'''第３０話：ロスト・ディーヴァ Scenario 30 - Lost Diva'''

|-
|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated, Kira is defeated '''Skill Point:''' Clear the map in 7 turns '''Secret Requirements:'''
*Strike Rouge IWSP
**Mwu must defeat Dearka
**After the event, Kira must defeat Athrun while both are in SEED.
'''Unit Acquisition:'''
*Skygrasper (Cagalli)
*Strike Gundam (Kira)
*Kira unlocks the SEED pilot skill
*Cagalli unlocks the SEED pilot skill (needs verification)
*Archangel loses Natarle as a subpilot

|'''Victory Condition:''' (1)(2) Defeat all enemies '''Defeat Condition:''' (1) Any ally is defeated: (2) Ally battleship is defeated, Fire Bomber, Diamond Force, or Skull Squadron are defeated '''Skill Point:''' In 6 turns, destroy Glavil and Gavil. You must destroy Glavil before Gavil '''Secret Requirements:'''
*Gavil and FBz-99G Zaubergeran
**Gamlin must defeat Gavil
'''Unit Acquisition:'''
*YF-19 (Isamu) (Before Deploying)
*YF-21 (Guld) (Before Deploying)
*VF-1S S Valkyrie (Focker)
*VF-1S S Valkyrie (Hikaru)
*VF-1A S Valkyrie (Kakizaki)
*VF-17D Nightmare (Gamlin)
*VF-17D Nightmare (Physica)
*VF-19 Kai Fire Valkyrie (Basara)
*VF-11 MAXL Kai (Mylene)
*VF-17 Kai Nightmare (Ray, Veffidas)

|-
| class="fc-route2" |'''第３１話：青き清浄なる世界のために Scenario 31 - For Our Blue & Pure World'''
| class="fc-route4" |'''第３１話：禁断の惑星へ Scenario 31 - To the Forbidden Planet'''

|-
|'''Victory Condition:''' (1) Defeat all enemies; (2)(3) Defeat all Mobile Dolls, All ZAFT Units retreat '''Defeat Condition:''' (1)(2) Ally battleship is defeated, Heero is defeated; (3) Ally battleship is defeated '''Skill Point:''' Do not let a single ZAFT machine get shot down '''Secret Requirements:'''
*Duel Gundam
**Yzak must survive the scenario.
'''Unit Acquisition:'''
*Archangel gains Newman as a subpilot
*Freedom Gundam (Kira)
*Daitarn 3 (Banjo)
*Black Wing (Alan)

|'''Victory Condition:'''
*1st Part: Defeat all enemies
*2nd Part: Defeat Gepelnitch
'''Defeat Condition:'''
*1st Part: Any ally is defeated
*2nd Part: Ally battleship is defeated, Basara or Gamlin are defeated
'''Skill Point:''' In 7 turns, destroy Glavil and Gavil and make Gepelnitch's ship retreat (at 50,000 HP) '''Secret Requirements:'''
*Destroid Monster
**Get the Skill Point on this stage.
*Gavil and FBz-99G Zaubergeran
**Gamlin must defeat Gavil 
'''Unit Acquisition:'''
*Destroid Monster

|-
| class="fc-route2" |'''第３２話：守護神の巫女 Scenario 32 - Priestess of the Guardian God'''
| class="fc-route4" |'''第３２話：インフィニティ・ソウル Scenario 32 - Infinity Soul'''

|-
|'''Victory Condition:''' (1)(2) Defeat all enemies '''Defeat Condition:''' Any Ally is defeated; Ally battleship is defeated, Sanger or Rastel are defeated '''Skill Point:''' In 5 turns, destroy the General of Hell or Flora. '''Secret Requirements:''' '''Unit Acquisition:'''
*Dygenguar (Sanger)
*Assenseiter (Ratsel)

|'''Victory Condition:''' (1) Valgo is defeated; (2)(3) Defeat all enemies '''Defeat Condition:''' (1) Mylene, Ray, or Gamlin are defeated; (2) Basara, Mylene, Ray, or Gamlin are defeated; (3) Ideon is defeated '''Skill Point:''' In 6 turns, destroy Valgo '''Secret Requirements:'''
*Gavil and FBz-99G Zaubergeran
**Gamlin must defeat Gavil 
'''Unit Acquisition:'''
*VF-17D Nightmare → VF-17S Nightmare (Gamlin)
*VF-17D Nightmare (Docker)
**VF-17S (Gamlin), VF-17D (Physica) and VF-17D (Docker) gain the "Diamond Force Attack" combination attack
*VF-19 Kai Fire Valkyrie, VF-11 MAXL Kai, and VF-17 Kai Nightmare gain the "Sound Booster" mech ability
**All VF-19 Kai Fire Valkyrie SB Songs gain (MAP) and (ALL) combination attack variants when Sound Booster activates.
**All VF-11 MAXL Kai SB Songs gain (MAP) and (ALL) combination attack variants when Sound Booster activates.
*Ideon (Cosmo, Kasha, Moera)
** Ideon gains the "Ideon Sword" and "Ideon Sword (MAP)" attacks when IDE gauge is full, and HP is below 30%
*Soloship (Bess, Hatari)

|-
| class="fc-route2" |'''第３３話：暁への脱出 Scenario 33 - Escape to Daybreak'''
| class="fc-route4" |'''第３３話：受け継ぎし遺産 Scenario 33 - The Successor's Inheritance'''

|-
|'''Victory Condition:''' (1)(2) Defeat all enemies besides the Albion (3) Reach the 9th turn '''Defeat Condition:''' (1) Ally battleship is defeated, Kira, Shinobu, or Alan are defeated, Albion is defeated; (2) Kira, Shinobu, Alan, Mwu, or Cagalli are defeated '''Skill Point:''' In 8 turns, destroy all enemies except the Albion '''Secret Requirements:''' '''Unit Acquisition:'''
*Strike Gundam (Mwu)
*Strike Rouge (Cagailli)
*M1 Astray (Juri)
*M1 Astray (Mayura)
*M1 Astray (Asagi)
*Justice Gundam (Athrun)
*Buster Gundam (Dearka)
*Mazinger Z gains the "Giant Swing Rocket Punch" attack
*Great Mazinger gains the "Great Booster" attack
*Koutetsu Jeeg stats are enhanced and can transform into Jeeg Panzeroid
*Dancouga and Black Wing can combine into Final Dancouga.

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated, Akira or Jinguji are defeated '''Skill Point:''' In 8 turns, destroy Etzira, Valgo, Glavil, Gabro Zan, and Gije '''Secret Requirements:''' '''Unit Acquisition:'''
*VF-1A S Valkyrie (Kakizaki)
*Raideen gains the Mutron Open mech ability
*Ideon (Cosmo, Kasha, Moera)
*Soloship (Bess, Hatari)
*Battle 7 (Max, Exedore, Miho, Sally)
*VF-1S S Valkyrie (Fokker)
*VF-1S S Valkyrie (Hikaru)
*VF-1A S Valkyrie (Kakizaki)
*YF-19 (Isamu)
*YF-21 (Guld)
*VF-19 Kai Fire Valkyrie (Basara)
*VF-11 MAXL Kai (Mylene)
*VF-17 Kai Nightmare (Ray, Veffidas)
*VF-17S Nightmare (Gamlin)
*VF-17D Nightmare (Physica)
*VF-17D Nightmare (Docker)

|}
 

==Stages 34 - 44==
{| width="100%"
|- class="fc-route-h"
| width="25%" |'''Touma Route'''
| width="25%" |'''Kusuha Route'''
| width="25%" |'''Cobray Route'''
| width="25%" |'''Selena Route'''

|-
| class="fc-route1" |'''第３４話：武人の心、その意味 Scenario 34 - Why a Warrior Fights'''
| class="fc-route2" |'''第３４話：怒りの強念者 Scenario 34 - The Wrath of a Esper'''
| class="fc-route3" |'''第３４話：虚ろな魂の捕囚 Scenario 34 - Captivity of the Hollow Soul'''
| class="fc-route4" |'''第３４話：ベトレイヤー Scenario 34 - Betrayer'''

|-
|'''Victory Condition:'''
*1st Part: (1)(2) Defeat all enemies
*2nd Part: Bemidoban is defeated 
'''Defeat Condition:'''
*1st Part: (1) Ally battleship is defeated; (2) Ally battleship is defeated, Touma is defeated
*2nd Part: Touma is defeated
'''Skill Point:''' Defeat all enemies within 6 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Raioh (Touma)
*Mazinger Z, Great Mazinger and Getter Dragon gain the "F Dynamic Special" combination attack

|'''Victory Condition:'''(1)(2) Shin RyuOhKi is defeated; (3)(4) Bemidoban and Shmuel are defeated '''Defeat Condition:''' (1) Any ally is defeated; (2) Kusuha is defeated; (3) Kusuha is defeated, Ally battleship is defeated; (4) Ally battleship is defeated '''Skill Point:''' Destroy the Bemidoban (retreats (8000 (E) / 10000 (N) / 12000 (H)) HP) '''Secret Requirements:''' '''Unit Acquisition:'''
*Mazinger Z, Great Mazinger and Getter Dragon gain the "F Dynamic Special" combination attack
*Dygenguar (Sanger)
*Aussenseiter (Ratsel)

|'''Victory Condition:''' Shin RyuOhKi is defeated '''Defeat Condition:''' Ally battleship is defeated, Cobray, Arad, or Seolla are defeated '''Skill Point:''' Defeat Shin RyuOuKi within 6 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Werkbau (Cobray)
*Mazinger Z, Great Mazinger and Getter Dragon gain the "F Dynamic Special" combination attack

|'''Victory Condition:''' (1) Shmuel is defeated; (2)(3) Bemidoban defeated Shin RyuOhKi '''Defeat Condition:''' (1) Selena is defeated; (2) Ally battleship is defeated, Selena is defeated; (3) Ally battleship is defeated '''Skill Point:''' Bemidoban and Shin RyuOuKi shot down. Both flee when below (8000 (E) / 10000 (N) / 12000 (H)) HP. '''Secret Requirements:''' '''Unit Acquisition:'''
*Mazinger Z, Great Mazinger and Getter Dragon gain the "F Dynamic Special" combination attack
*Alterion (CF) (Ibis, Tsugumi)
* Vegalion (Slay)
*AS Soleares (Selena, Elma)

|-
| class="fc-route1" |'''第３５話：闘志、誰がために Scenario 35 - For Whom the Fighting Spirit Burns'''
| class="fc-route2" |'''第３５話：魂、久遠に Scenario 35 - The Soul, Into Eternity'''
| class="fc-route3" |'''第３５話：THE GUN OF DIS Scenario 35 - THE GUN OF DIS'''
| class="fc-route4" |'''第３５話：クロージング・ハート Scenario 35 - Closing Heart'''

|-
|'''Victory Condition:''' (1)(2) Defeat all enemies '''Defeat Condition:''' (1) Touma is defeated; (2) Ally battleship is defeated, Touma, Sanger, or Rastel are defeated '''Skill Point:''' Defeat all enemies within 4 turns of allied reinforcements arriving. '''Secret Requirements:''' '''Unit Acquisition:'''
*DaiRaioh(Touma)
*Dygenguar (Sanger)
*Aussenseiter (Ratsel)

|'''Victory Condition:''' (1)(2)(3) Shin RyuOhKi is defeated '''Defeat Condition:''' (1) Kusuha or Bullet are defeated; (2) Kusuha is defeated; (3) Ally battleship is defeated, Kusuha is defeated '''Skill Point:''' Destroy Shin RyuOhKi within 6 turns of Varuch Ben and Ishar's arrival, destroying them first. '''Secret Requirements:''' '''Unit Acquisition:'''
*GouRyu Kai (Kusuha)
*Raiko Kai (Bullet)
*Shin RyuKoOh (Kusuha, Bullet)
*Dygenguar (Sanger)
*Aussenseiter (Ratsel)

|'''Victory Condition:''' (1)(2) Bemidoban or Shmuel are defeated; (3) ??? is defeated; (4) Valk Baal is defeated '''Defeat Condition:''' (1) Cobray is defeated, (2)(3)(4) Ally battleship is defeated, Cobray is defeated '''Skill Point:''' Defeat the Bemidoban within 5 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Varuch Ben (Cobray)
*Dis Astranagant (Cobray)

|'''Victory Condition:''' (1)(2) Defeat all enemies '''Defeat Condition:''' (1) Selena is defeated; (2) Ally battleship is defeated '''Skill Point:''' Map cleared within 7 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Eslim (Selena)
* AS Alegrias (Selena, Elma)
*Alterion (CF) replaces Tsugumi with Slay as a Subpilot

|-
| colspan="4" class="fc-std-sc" |'''第３６話：激突！勇者VS勇者！ Scenario 36 - Clash! Brave vs. Brave!'''

|-
| colspan="4" |'''Victory Condition:'''
*1st Part: Defeat all enemies
*2nd Part: Ally battleship is defeated
'''Defeat Condition:'''
*1st Part: Star GaoGaiGar is defeated
*2nd Part: Gai is defeated
'''Skill Point:''' Defeat all enemies within 6 turns. '''Secret Requirements:'''
*EVA-01 F-Type Equipment
**Shinji must defeat Ramiel on the first part of this scenario.
*Early Nu Gundam HWS
**Amuro must have 60 or more kills by the end of the scenario.
*GP-02A
**Burning, Monsha, Bate, and Adel must have a combined killcount of 100 or more by the end of the scenario.
*Nuclear Bazooka
**Meet the requirements for GP-02A
*Black Getter
**Michiru must have 20 kills or more by the end of the scenario.
'''Unit Acquisition:'''
*Gundam GP02
*Megarider
*Re-GZ BWS
*MP Nu Gundam
*Black Getter
*VF-1S S Valkyrie (Fokker)
*VF-1S S Valkyrie (Hikaru)
*VF-1A S Valkyrie (Kakizaki)
*VF-1J S Valkyrie
*YF-19 (Isamu)
*YF-21 (Guld)
*Battle 7 (Max)
*VF-19 Kai Fire Valkyrie (Basara)
*VF-11 MAXL Kai (Mylene)
*VF-17 Kai Nightmare (Ray)
*VF-17S Nightmare (Gamlin)
*VF-17D Nightmare (Physica)
*VF-17D Nightmare (Docker
*Soloship (Bess, Hatari)
*Ideon (Cosmo, Kasha, Moera)

|-
| colspan="4" class="fc-std-sc" |'''第３７話：果て無き旅路の始まり Scenario 37 - The Beginning of an Unending Journey'''

|-
| colspan="4" |'''Victory Condition:''' (1) Defeat all enemies; (2)(3) Devariim is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated; (3) Ally battleship is defeated, Bundle, Cutnall, or Kernagul are defeated
'''Skill Point:''' All enemies destroyed within 6 turns, with Devariim being last. '''Secret Requirements:''' '''Unit Acquisition:'''
*Heavy Weapons System parts for Nu Gundam
*Evangelion Unit 0 Custom gains the "N2 Mine" MAP attack
*Evangelion Unit 1 gains the "Magoroku E Sword" attack
*Gunbuster (Noriko)
*Sizzler Black (Jung)
*Eltrium (Tashiro, Deputy Chief)
*Bundle Ship (Bundle)
*Cutnall Ship (Cutnall)
*Kernagul Ship (Kernagul)

|- class="fc-route-h"
| colspan="2" |'''Go with the Soloship''' Gundam (0083, Zeta, ZZ, CCA, Wing, SEED) Getter Robo Raideen Daitarn 3 Evangelion Ideon GaoGaiGar
| colspan="2" |'''Go with the Battle 7''' Mazinger (Z, Great) Macross (DYRL, 7, Plus) Steel Jeeg Combattler V Voltes V Gunbuster Daimos Gaiking Goshogun Dancouga Virtual On

|-
| colspan="2" class="fc-route1" |'''第３８話：運命の炎の中で Scenario 38 - Within the Fires of Destiny'''
| colspan="2" class="fc-route3" |'''第３８話：戦火は星の瞬きと Scenario 38 - The Fires of War Among the Twinkling Stars'''

|-
| colspan="2" |'''Victory Condition:'''
*1st Part: Enemy Battleship is defeated
*2nd Part: (1) Defeat all enemies; (2) Dalam's Ship is defeated
'''Defeat Condition:'''
*1st Part: Ally battleship is defeated, Ideon is defeated
*2nd Part: (1) Ally battleship is defeated; (2) Ally battleship is defeated, Cosmo is defeated
'''Skill Point:''' Clear the map within 7 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Ideon loses Moera as a subpilot
*Ideon gains the "Ideon Gun" attack

| colspan="2" |'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Defeat all enemies within 6 turns. '''Secret Requirements:''' '''Unit Acquisition:'''

|-
| colspan="2" class="fc-route1" |'''第３９話：果てに待つもの Scenario 39 - What Awaits at the End'''
| colspan="2" class="fc-route3" |'''第３９話：ただ母星のために Scenario 39 - All for the Motherworld'''

|-
| colspan="2" |'''Victory Condition:''' (1)(2)Gabro Zan is defeated '''Defeat Condition:''' (1) Ally battleship is defeated, Ryouma, Hayato, Benkei, or Michiru are defeated; (2) Ally battleship is defeated, Ryouma, Hayato, Benkei, or Cosmo are defeated '''Skill Point:''' Destroy all Buff Clan ships within 8 turns, saving Gabro Zan for last. '''Secret Requirements:''' '''Unit Acquisition:'''
* Ideon gains Gije as a subpilot
* Shin Getter-1 gains the "Shin Shine Spark" attack

| colspan="2" |'''Victory Condition:''' Heinel is defeated '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Within 7 turns, defeat all enemies, then defeat Heinel and Richter (Richter must be defeated before Heinel) '''Secret Requirements:''' '''Unit Acquisition:'''

*Goshogun gains the "GoFlasher Special" attack

|-
| colspan="2" class="fc-route1" |'''第４０話：勇者王、最後の刻！ Scenario 40 - The King of Brave’s Final Hour!'''
| colspan="2" class="fc-route3" |'''第４０話：勇気、果つる時… Scenario 40 - When Courage Fails...'''

|-
| colspan="2" |'''Victory Condition:'''
*1st Part: Defeat all enemies
*2nd Part: Ally battleship is defeated
'''Defeat Condition:'''
*1st Part: Defeat all enemies
*2nd Part: Gai is defeated
'''Skill Point:''' Defeat all enemies within 6 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*All GaoGaiGar units are lost

| colspan="2" |'''Victory Condition:''' (1)(2)(3) Defeat all enemies '''Defeat Condition:''' (1) Gai is defeated; (2) Ally battleship is defeated, Gai is defeated; (3) Ally battleship is defeated '''Skill Point:''' Defeat all enemies within 7 turns, with Palparepa Plus being the last one. '''Secret Requirements:''' '''Unit Acquisition:'''
*GaoFighGar (Gai)
*All GaoGaiGar units are lost

|-
| colspan="4" class="fc-std-sc" |'''第４１話：銀河が消滅する日 Scenario 41 - The Day the Galaxy is Extinguished'''

|-
| colspan="4" |'''Victory Condition:''' (1) Defeat all enemies; (2) GaoFighGar is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated, J is defeated '''Skill Point:''' GaoFighGar shot down by turn 7. '''Secret Requirements:'''
*Gije & Ganga Rube
**When given the option, choose to meet the opponent's challenge (first option).
'''Unit Acquisition:'''
*J-Ark (J, Tomoro)
|-
| colspan="4" class="fc-std-sc" |'''第４２話：超勇者黙示録 Scenario 42 - The Super Brave Apocalypse'''

|-
| colspan="4" |'''Victory Condition:'''
*1st Part: Defeat all enemies
*2nd Part: Genesis GaoGaiGar reaches the designated point in 4 turns
'''Defeat Condition:'''
*1st Part: Gai or J are defeated
*2nd Part: Ally battleship is defeated, Gai is defeated, 5th turn is reached
'''Skill Point:''' All enemies shot down by turn 7. '''Secret Requirements:'''
* J-Phoenix & Renais (Sub Pilot)
**Have J defeat Pia Decem on the first part of the stage. Defeat Pia Decem again to gain the attack.
'''Unit Acquisition:'''
* King J-der gains the "J-Phoenix" attack, and gains Renais as a sub-pilot
**Koryuu and Anryuu lose the "Renais Support Attack" attacks
*Genesic GaoGaiGar (Gai)
*J-Ark (J, Tomoro)
** Renais also is a sub-pilot if the conditions are met in the first part of the stage
*Goldymarg (Goldymarg)
*Big Volfogg (Volfogg)
*TenRyuJin (TenRyuJin)
*KoRyu (KoRyu)
*AnRyu (AnRyu)
*EnRyu (EnRyu)
*HyoRyu (HyoRyu)
*Mic Sounder XIII (Mic Sounder XIII)

|- class="fc-route-h"
|'''Touma Route'''
|'''Kusuha Route'''
|'''Cobray Route'''
|'''Selena Route'''

|-
| class="fc-route1" |'''第４３話：閉ざされた世界で Scenario 43 - In a Closed-Off World'''
| class="fc-route2" |'''第４３話：真の龍神 Scenario 43 - The True Dragon God'''
| class="fc-route3" |'''第４３話：人形たちの宴 Scenario 43 - The Doll’s Banquet'''
| class="fc-route4" |'''第４３話：サイレント・クライ Scenario 43 - Silent Cry'''

|-
|'''Victory Condition:'''
*1st Part: (1) Defeat all enemies; (2) Vaikran is defeated, Houle is defeated
*2nd Part: Baran is defeated
'''Defeat Condition:'''
*1st Part: (1) Ally battleship is defeated, Touma or Ryusei are defeated; (2) Ally battleship is defeated, Ryusei is defeated
*2nd Part: Touma is defeated
'''Skill Point:''' Defeat the Bemidoban within 5 turns. '''Secret Requirements:''' '''Unit Acquisition:'''

|'''Victory Condition:''' (1) Defeat Shin RyuOhKi; (2) Vaikran is defeated, Houle is defeated '''Defeat Condition:''' (1) Kusuha or Ryusei are defeated; (2) Ally battleship is defeated, Ryusei is defeated '''Skill Point:''' Defeat Shin RyuOhKi within 5 turns. '''Secret Requirements:''' '''Unit Acquisition:'''

|'''Victory Condition:'''
*1st Part: (1) Defeat all enemies; (2) Vaikran is defeated, Houle is defeated
*2nd Part: Valk Baal is defeated
'''Defeat Condition:'''
*1st Part: (1)(2) Ally battleship is defeated, Ryusei is defeated
*2nd Part: Cobray is defeated
'''Skill Point:''' Defeat the Bemidoban within 5 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Dis Astranagant (Cobray) is unavailable during the intermission

|'''Victory Condition:''' (1) Defeat all enemies; (2)(3) Vaikran is defeated, Houle is defeated'''Defeat Condition:''' (1)(2) Ally battleship is defeated, Selena, Ibis, or Ryusei are defeated (3) Ryusei is defeated'''Skill Point:''' Defeat the Bemidoban within 5 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*AS Alegrias (Selena, Elma?) Is unavailable until the next stage

|-
| class="fc-route1" |'''第４４話：闘志、未来のために Scenario 44 - Fighting Spirit, for the Future'''
| class="fc-route2" |'''第４４話：四神招魂、ここに Scenario 44 - The Four Gods Souls, Gather Here'''
| class="fc-route3" |'''第４４話：鋼の戦神 Scenario 44 - The Steel War God'''
| class="fc-route4" |'''第４４話：マイホーム・マイフレンズ Scenario 44 - My Home, My Friends'''

|-
|'''Victory Condition:'''
*1st Part: Vaikran is defeated
*2nd Part: (1)(2) Vaikran is defeated
'''Defeat Condition:'''
*1st Part: Ally battleship is defeated, Ryusei is defeated
*2nd Part: (1) Touma or Lyria are defeated; (2) Touma, Baran, or Lyria are defeated
'''Skill Point:''' Destroy the Vaikran within 5 turns. '''Secret Requirements:'''
*VF-19F Excaliburs
**Max must have a total of 60 or more kills by the end of the scenario, if you do not pick the Go to Varauta route.
*Gije & Ganga Rube
**You must pick the Go To Bozoan Route.
'''Unit Acquisition:'''
* DaiRaioh gains the "Jinrai" attack 
*Banpreios (Ryuusei, Rai, Mai)
*Dygenguar (Sanger)
*Aussenseiter (Ratsel)
*Shumel (Lyria)
*Bemidoban (Baran)

|'''Victory Condition:'''
*1st Part: Vaikran is defeated
*2nd Part: (1)(2) Vaikran is defeated
'''Defeat Condition:'''
*1st Part: Kusuha or Ryusei are defeated
*2nd Part: (1) Ally battleship is defeated, Kusuha is defeated; (2) Kusuha, Bullet, or Lyria are defeated
'''Skill Point:''' Destroy the Vaikran within 5 turns. '''Secret Requirements:'''
*VF-19F Excaliburs
**Max must have a total of 60 or more kills by the end of the scenario, if you do not pick the Go to Varauta route.
*Gije & Ganga Rube
**You must pick the Go To Bozoan Route.
'''Unit Acquisition:'''
*Banpreios (Ryuusei, Rai, Mai)
*Dygenguar (Sanger)
*Aussenseiter (Ratsel)
*Shumel (Lyria)
*Shin RyuKoOh can now transform into Shin KoRyuOh

|'''Victory Condition:'''
*1st Part: (1) Defeat all enemies; (2) Vaikran is defeated
*2nd Part: Defeat all enemies
'''Defeat Condition:'''
*1st Part: (1)(2) Ally battleship is defeated, Ryusei, Arad or Seola are defeated
*2nd Part: Ally battleship is defeated, Cobray or Lyria are defeated
'''Skill Point:''' Destroy the Vaikran within 3 turns of its arrival. '''Secret Requirements:'''
*VF-19F Excaliburs
**Max must have a total of 60 or more kills by the end of the scenario, if you do not pick the Go to Varauta route.
*Gije & Ganga Rube
**You must pick the Go To Bozoan Route.
'''Unit Acquisition:'''
*Dis Astranagant (Cobray)
*Banpreios (Ryuusei, Rai, Mai)
*Dygenguar (Sanger)
*Aussenseiter (Ratsel)
*Shumel (Lyria)

|'''Victory Condition:'''
*1st Part: (1) Valk Isher is defeated; (2) Vaikran is defeated
*2nd Part: (1)(2) Vaikran is defeated
'''Defeat Condition:'''
*1st Part: (1)(2) Ally battleship is defeated, Ryusei or Ibis are defeated
*2nd Part: (1) Ally battleship is defeated, Selena, Ibis, or Lyria are defeated; (2) Selena or Lyria are defeated
'''Skill Point:''' Destroy the Vaikran within 3 turns of its arrival. '''Secret Requirements:'''
*VF-19F Excaliburs
**Max must have a total of 60 or more kills by the end of the scenario, if you do not pick the Go to Varauta route.
*Gije & Ganga Rube
**You must pick the Go To Bozoan Route.
'''Unit Acquisition:'''
*Banpreios (Ryuusei, Rai, Mai)
*Dygenguar (Sanger)
*Aussenseiter (Ratsel)
*Shumel (Lyria)
*Alterion (CF) replaces Slay with Tsugumi as a subpilot
*Vegalion (Slay)
**Alterion (CF) and Vegalion can combine into Hyperion

|}
 

==Stages 45 - 48==
{| width="100%"
|- class="fc-route-h"
| colspan="2" |'''Go to Earth'''
| colspan="2" |'''Go to Space'''

|- class="fc-route-h"
| width="25%" |'''Search for Irui''' Mazinger (Z, Great) Getter Robo Kotetsu Jeeg Gaiking Dancouga
| width="25%" |'''Fight against ZAFT''' Gundam (0083, Z, ZZ, CCA) Gundam Wing Gundam SEED Evangelion
| width="25%" |'''Go to Varauta''' Macross (DYRL, 7, Plus) GoShogun Daitarn 3 Gunbuster
| width="25%" |'''Go to Boazan''' Ideon Combattler V Voltes V Daimos Raideen GaoGaiGar Virtual On

|-
| class="fc-route1" |'''第４５話：とらわれの心、叫ぶ時 Scenario 45 - When the Captive Heart Cries Out'''
| class="fc-route2" |'''第４５話：忍び寄る終焉 Scenario 45 - Creeping Death'''
| class="fc-route3" |'''第４５話：悪夢の突入作戦 Scenario 45 - Charging into a Nightmare'''
| class="fc-route4" |'''第４５話：もう一つの母星ボアザン Scenario 45 - Another Mother Planet - Boazan'''

|-
|'''Victory Condition:''' (1) Defeat all enemies: (2) Legion is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated '''Skill Point:''' Defeat all enemies within 7 turns '''Secret Requirements:'''
'''Unit Acquisition:'''

|'''Victory Condition:''' (1) Defeat all enemies; (2) All Angels are defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated, Shinji, Asuka, or Rei are defeated '''Skill Point:''' Defeat all enemies within 5 turns. '''Secret Requirements:'''
*Early Nu Gundam HWS
**If you did not receive it on Scenario 37, Amuro must have 60 or more kills by the end of the scenario.
*EVA-01 F-Type Equipment(optional)
**Shinji must defeat Armisael.
*Neue Ziel
**Kou must have 40 or more kills than Keith by the end of the scenario.
*Val Varo
**Keith must have 20 or more kills than Kou by the end of the scenario.
*Gerbera Tetra
**Kou and Keith's killcounts must be within 6 of one another by the end of the scenario.
*Quin Mantha
**The sum of Ple and Ple 2's killcounts must be a number ending in 5 at the end of the scenario.
*Haman's Qubeley
**The sum of Ple and Ple 2's killcounts must be a number ending in 0 at the end of the scenario.
*MP Qubeleys
**The sum of Ple and Ple 2's killcounts must be a number ending in 7 at the end of the scenario.
*Doven Wolf
**The sum of Beecha and Mondo's killcounts must be a number ending in 0 at the end of the scenario.
*Geymalk
**The sum of Beecha and Mondo's killcounts must be a number ending in 5 at the end of the scenario.
*Strike Rouge IWSP
**The sum of Cagalli, Julie, Mayura, and Asagi's killcounts must be 100 or more by the end of the scenario.
*Early Full Armor ZZ Gundam
**Judau, Mondo, Beecha, Elle, Roux, and Iino's combined killcounts must be greater than 115 by the end of this scenario.
'''Unit Acquisition:'''
*Neue Ziel OR Val Varo OR Gerbera Tetra
*Quin Mantha OR Haman's Qubeley OR Mass Production Qubeley (x2)
*Doven Wolf OR Geymalk
*Strike Rougue IWSP
*Heavy Weapon System for Nu Gundam
*Full Armor Parts for ZZ Gundam
*Evangelion Unit 2 gains the "A.T. Field" attack
*Evangelion Unit 0 Custom gains the "Lance of Longinus" attack

|'''Victory Condition:'''
*1st Part: All allies reach the designated point, aside Battle 7
*2nd Part: Any ally reaches the designated point
'''Defeat Condition:'''
*1st Part: Any ally is defeated
*2nd Part: Any ally is defeated
'''Skill Point:''' Defeat all enemies before moving a unit to the target area. '''Secret Requirements:'''
'''Unit Acquisition:'''
*The following all gain the "Large Anti-Ship Reaction Missile" attack
**VF-1S S Valkyrie (Focker), VF-1S S Valkyrie (Hikaru), VF-1A S Valkyrie (Kakizaki)
**VF-17S Nightmare (Gamlin), VF-17D Nightmare (Docker), VF-17D Nightmare (Physica)
**YF-19 (Isamu), YF-21 (Guld)

|'''Victory Condition:''' Zartan is defeated '''Defeat Condition:''' Any ally is defeated '''Skill Point:''' Destroy all other enemies before destroying Zaltan. '''Secret Requirements:'''
'''Unit Acquisition:'''
*Voltes V is unavailable during the intermission
*Daimos is unavailable during the intermission

|-
| class="fc-route1" |'''第４６話：さらば父よ、戦士達の旅立ち Scenario 46 - Farewell, Father! The Warriors Depart'''
| class="fc-route2" |'''第４６話：永遠を信じて Scenario 46 - Believe in Eternity'''
| class="fc-route3" |'''第４６話：野望の第４惑星 Scenario 46 - The Fourth Planet of Ambition'''
| class="fc-route4" |'''第４６話：崩れゆく邪悪の塔 Scenario 46 - The Collapsing Tower of Evil'''

|-
|'''Victory Condition:''' (1) Steel Jeeg persuades Flora; (2) Defeat Yamata no Orochi, Demonica, and the Dragon Ship; (3) '''Defeat Condition:''' (1) Flora is defeated, Ally battleship is defeated, Kouji, Tetsuya, or Steel Jeeg are defeated; (2) Yamata no Orochi reaches the designated point, Ally battleship is defeated, Kouji, Tetsuya or Steel Jeeg are defeated '''Skill Point:''' Destroy Ryuuma and the Grand Marshall of Hell within 8 turns. '''Secret Requirements:'''
*Minmei's Disc
**Move Boss's squad onto either 'Hut' tile on the beach, and you will pick up the item
'''Unit Acquisition:'''
*Mazinkaizer gains the "Kaizer Nova" attack and Flight (S Rank in Air)

|'''Victory Condition:''' (1)(2) Defeat all enemies; (3) The Dominion withdraws '''Defeat Condition:''' (1) Any ally is defeated; (2)(3) Ally battleship is defeated, Kira or Athrun are defeated '''Skill Point:''' Destroy the Dominion (retreats at (10000HP (E) / 15000HP (N)/20000HP (H)) '''Secret Requirements:''' '''Unit Acquisition:'''
*Eternal (Lacus, Andrew)
*BuCUE
*METEOR parts for Freedom Gundam
*METEOR parts for Justice Gundam
*LaGOWE

|'''Victory Condition:''' (1) Guide all enemies east past the designated line; (2) All allies reach the escape point '''Defeat Condition:''' (1) Any ally is defeated, Any enemy is defeated; (2) Any ally is defeated '''Skill Point:''' Clear the map by defeating all enemies within 8 turns of the victory condition change '''Secret Requirements:'''
*VF-19F Excaliburs
**Max must get 15 or more kills on this scenario.
'''Unit Acquisition:'''
*VF-22S Sturmvogel II (Max)
*FBz-99G Zaubergeran (Gamlin)
*VF-19 Kai Fire Valkyrie gains the song "TRY AGAIN"
**VF-19 Kai Fire Valkyrie, VF-11 MAXL Kai, and VF-17 Kai Nightmare gain the "TRY AGAIN" (MAP) and (ALL) combination attack

|'''Victory Condition:''' (1) None; (2) Warchimedes is defeated; (3) Janera is defeated '''Defeat Condition:''' (1) Any friendly unit is defeated, Voltes V or Daimos are defeated; (2)(3) Ally battleship is defeated, Hyouma, Ken'ichi, Kazuya, or Heinel are defeated '''Skill Point:''' Destroy all enemies and finish the stage within 10 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Combattler V, Voltes V, and Daimos gain the "Choudenji SeiKenZuki" combination attack

|-
| class="fc-route1" |'''第４７話：神になろうとした男 Scenario 47 - The Man Who Tried to Become a God'''
| class="fc-route2" |'''第４７話：ヒトの見た夢 Scenario 47 - The Dream People Saw'''
| class="fc-route3" |'''第４７話：大宇宙の意志 Scenario 47 - The Will of the Universe'''
| class="fc-route4" |'''第４７話：因果の海で Scenario 47 - In the Sea of Causality'''

|-
|'''Victory Condition:''' (1) Defeat all enemies; (2) Shapiro is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated '''Skill Point:''' Destroy Shapiro within 6 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Gaiking and Daiku Maryuu gain the "Giant Cutter Upside-down Slash" combination attack

|'''Victory Condition:''' (1)(2)(3) Defeat all enemies; '''Defeat Condition:''' (1) Ally battleship is defeated, Kira, Mwu, or Dearka are defeated; (2) Kira is defeated; (3) The Vesalius is defeated '''Skill Point:''' Orga, Clotho and Shani shot down before Fllay reaches the Dominion. '''Secret Requirements:''' '''Unit Acquisition:'''

|'''Victory Condition:''' (1)(2)(3) Defeat all enemies '''Defeat Condition:''' (1) Any ally is defeated; (2) Ally battleship is defeated, Bundle is defeated; (3) Ally battleship is defeated, Bundle, Gamlin, or Mylene are defeated '''Skill Point:''' Destroy all SMTC units within 5 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*VF-19S Excalibur (before deployment)
*VF-19F Excalibur (x2) (before deployment)
*Bundle's Ship (Bundle, Cutnal, Kernagul)

|'''Victory Condition:'''
*1st and 2nd Part: Defeat all enemies within (5 (E) / 4 (N) / 3 (H)) turns
*3rd and 4th Part: Defeat all enemies within (4 (E) / 3 (N) / 2 (H)) turns
*5th Part: Defeat all enemies within (8 (E) / 7 (N) / 6 (H)) turns
'''Defeat Condition:'''
*1st and 2nd Part: Ally battleship is defeated, Turn (6 (E) / 5 (N) / 4 (H)) is reached
*3rd and 4th Part: Ally battleship is defeated, Turn (5 (E) / 4 (N) / 3 (H)) is reached
*5th Part: Ally battleship is defeated, Turn (9 (E) / 8 (N) / 7 (H)) is reached
'''Skill Point:''' During the 5th Part: Shoot down the two Gataman Zans before the Gabro Zan '''Secret Requirements:''' '''Unit Acquisition:'''

|-
| colspan="2" class="fc-route1" |'''第４８話：失われた者たちへの鎮魂歌 Scenario 48 - Requiem for the Lost'''
| colspan="2" class="fc-route4" |'''第４８話：銀河に死す Scenario 48 - To Die in the Galaxy'''

|-
| colspan="2" |'''Victory Condition:''' (1) Deathgaia, Gildrome, and Helmut are defeated; (2) Mute Zalbados is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated '''Skill Point:''' Defeat all enemies within 6 turns after Muge Zalbados appears, then defeat Muge Zalbados '''Secret Requirements:'''
*Early Nu Gundam HWS
**If you did not receive it on Scenario 37 or 45, Amuro must have 60 or more kills by the end of the scenario.
'''Unit Acquisition:'''

| colspan="2" |'''Victory Condition:''' (1) Defeat all enemies; (2) Gollum or Zomd are defeated; (3) Defeat all enemies; (4) Gabro Zan is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated, Basara is defeated; (3)(4) Ally battleship is defeated, Ideon is defeated '''Skill Point:''' Destroy GaviGla (retreats at 8000HP (E) / 10000HP (N) / 12000HP (H)) '''Secret Requirements:'''
*Early Nu Gundam HWS
**If you did not receive it on Scenario 37 or 45, Amuro must have 60 or more kills by the end of the scenario.
*Gije & Ganga Rube
**The Ide Gauge must reach level 5 during this scenario.
'''Unit Acquisition:'''
*Ideon replaces Gije with Dek as a Subpilot
*Battle 7 gains the "Large Anti-Ship Reaction Missile" attack
*VF-19 Kai Fire Valkyrie (Basara) is unavailable during the intermission

|}
 

==Stages 49 - 58==
{| width="100%"
|-
| colspan="3" class="fc-std-sc" |'''第４９話：銀河に響く歌声 Scenario 49 - Songs Resounding Through the Galaxy'''

|-
| colspan="3" |'''Victory Condition:'''
*1st Part: Defeat all enemies, In 5 turns Battle 7 reaches the designated point
*2nd Part: (1) In 6 turns, Battle 7 reaches the designated point; (2)(3)(4) Gepelnitch is defeated
'''Defeat Condition:'''
*1st Part: Ally battleship is defeated, Battle 7 doesn't reach the designated point by turn 6
*2nd Part: (1) Ally battleship is defeated, Mylene or Ray are defeated, Battle 7 doesn't reach the designated point by turn 7; (2) Ally battleship is defeated, Ray is defeated; (3) Ally battleship is defeated, Basara, Mylene, or Ray are defeated; (4) Ally battleship is defeated, Basara, Mylene, Ray, or Sybil are defeated
'''Skill Point:''' GaviGla is defeated (in the 1st part) '''Secret Requirements:'''
*Gavil and FBz-99G Zaubergeran
**If Gamlin has over 50 kills, Gamlin must defeat GaviGla during the first half of the scenario. During the second half of the scenario, do not defeat Gavil.
'''Unit Acquisition:'''
*VF-22S Sturmvogel II (Max)
*VF-22S Sturmvogel II (Milia)
*Sybil (Sybil)
**VF-19 Kai Fire Valkyrie, VF-11 MAXL Kai, and VF-17 Kai Nightmare, and Sybil gain the "TRY AGAIN" combination attack
*FBz-99G Zaubergeran (Gavil)

|-
| colspan="3" class="fc-std-sc" |'''第５０話：二つの門と二つの星 Scenario 50 - Two Gates, Two Stars'''

|-
| colspan="3" |'''Victory Condition:''' (1) Hermodr Echad is defeated; (2) Zfield is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated '''Skill Point:''' Destroy the Hermodr Echad within 5 turns. '''Secret Requirements:'''
*Duel Gundam & Yzak
**Dearka's killcount must be 50 or more by the end of the scenario.
'''Unit Acquisition:'''

|-
| colspan="3" class="fc-std-sc" |'''第５１話：終わらない明日へ Scenario 51 - To an Unending Tomorrow'''

|-
| colspan="3" |'''Victory Condition:'''
*1st Part: (1) Destroy all nuclear missiles; (2) Dominion is defeated & Athrun reaches the designated point
*2nd Part: Destroy the Genesis reactor within 4 turns
'''Defeat Condition:'''
*1st Part: (1) Any missile reaches the end of the map, Ally battleship is defeated, Kira, Athrun or Cagalli are defeated; (2) Ally battleship is defeated, Kira, Athrun or Cagalli are defeated
*2nd Part: Kira is defeated, reach the 5th turn
'''Skill Point:''' Destroy the Providence Gundam (in the 2nd part) '''Secret Requirements:'''
*Duel Gundam & Yzak
**During the first half of the scenario, destroy all of the nukes, then have Dearka battle with Yzak
**Both must survive the first half of the scenario
'''Unit Acquisition:'''
*Cagalli and Lacus unlock the SEED pilot skill
*Duel Gundam (Yzak) (can join permanently)

|-
| colspan="3" class="fc-std-sc" |'''第５２話：世界の中心でアイを叫んだもの Scenario 52 - The One Who Cried "Love" at the Heart of the World'''

|-
| colspan="3" |'''Victory Condition:'''
*1st Part: (1)(2)(3) Defeat all enemies (4)(5) EVA Unit 1 is defeated
*2nd Part: EVA Unit 1 is defeated
'''Defeat Condition:'''
*1st Part: (1) Any ally is defeated; (2) Shinji is defeated; (3)(4) Ally battleship is defeated; (5) Ally battleship is defeated, Reach the 6th turn after the "Cross" grows from the Earth
*2nd Part: Shinji is defeated
'''Skill Point:''' Asuka survives for 2 full turns. '''Secret Requirements:'''
*Neue Ziel
**Kou must have 40 or more kills than Keith by the end of the scenario.
*Val Varo
**Keith must have 20 or more kills than Kou by the end of the scenario.
*Gerbera Tetra
**Kou and Keith's killcounts must be within 6 of one another by the end of the scenario.
*Quin Mantha
**The sum of Ple and Ple 2's killcounts must be a number ending in 5 at the end of the scenario.
*Haman's Qubeley
**The sum of Ple and Ple 2's killcounts must be a number ending in 0 at the end of the scenario.
*MP Qubeleys
**The sum of Ple and Ple 2's killcounts must be a number ending in 7 at the end of the scenario.
*Doven Wolf
**The sum of Beecha and Mondo's killcounts must be a number ending in 0 at the end of the scenario.
*Geymalk
**The sum of Beecha and Mondo's killcounts must be a number ending in 5 at the end of the scenario.
*EVA-01 F-Type Equipment
**Shinji must defeat Zeruel on the first part of this scenario.
**Shinji must defeat EVA-01 on the second part of this scenario.
**The sum of Shinji, Asuka, and Rei's killcounts must be 250 or more, or 150 or more if you met the requirement on scenario 45.
*Hi-Nu Gundam
**Amuro and Bright's combined killcounts must be greater than 120 by the end of this scenario.
*Sazabi
**Amuro and Kamille's killcount must be 50 or more each at the end of this scenario. You will receive it at the start of next scenario.
*Strike Rouge IWSP
**If you did not receive it on Scenario 45, the sum of Cagalli, Julie, Mayura, and Asagi's killcounts must be 100 or more by the end of the scenario.
*Destroid Monster
**If you did not receive it on Scenario 31, the sum of Fokker, Hikaru, and Kakizaki's killcounts must be 100 or more by the end of this scenario.
'''Unit Acquisition:'''
*Evangelion Unit 0 (Kaowru)
*Evangelion Unit 0 loses the "Lance of Longinus" attack

|-
| colspan="3" class="fc-prologue" |'''Beyond this point, losing Ideon results in a Game Over'''
|-
| colspan="3" class="fc-std-sc" |'''第５３話：出航！銀河殴り込み艦隊！ Scenario 53 - The Galactic Assault Fleet Takes Sail!'''

|-
| colspan="3" |'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' 230 enemy units shot down by turn 7. '''Secret Requirements:''' '''Unit Acquisition:'''
*All secret units and parts are given after the stage begins <ul><li>Neue Ziel OR Val Varo OR Gerbera Tetra</li><li>Quin Mantha OR Haman's Qubeley OR Mass Production Qubeley (x2)</li><li>Doven Wolf OR Geymalk</li><li>Strike Rougue IWSP</li><li>Hi-Nu Gundam</li><li>Sazabi</li><li>Destroid Monster</li><li>F-Type Equipment for Evangelion Unit 1</li><li>Atomic Bazooka parts for GP-02</li><li>Heavy Weapon System for Nu Gundam</li></ul>
* Full Armor modular parts for Gundam ZZ
** If the secret requirements were not met earlier
*MP Nu Gundam
**Fin Funnel parts for MP Nu Gundam
*Gunbuster adds Kazumi as a Subpilot
**Gunbuster gains the "Super Inazuma Kick" attack
*Ra Cailum gains the "Nuclear Missile" MAP and ALL attacks

|-
| colspan="3" class="fc-std-sc" |'''第５４話：神に守られし星 Scenario 54 - The Planet Guarded by the Gods'''

|-
| colspan="3" |'''Victory Condition:'''
*1st Part: (1) Defeat all enemies; (2) The SRX Team rescues [https://akurasu.net/wiki/Super_Robot_Wars/Alpha_3/Info_Dump#Finding_Aya_on_Scenario_54 Aya]; (3) Jumora is defeated
*2nd Part: Bemidoban is defeated
'''Defeat Condition:'''
*1st Part: (1)(2) Ally battleship is defeated, Ryusei or Viletta are defeated; (3) Ally battleship is defeated, Ryusei, Viletta, Baran, or Lyria are defeated
*2nd Part: Sanger is defeated
**2nd Part (Touma Route): Touma is defeated
'''Skill Point:''' Clear the map within 10 turns, with both Hermoz defeated '''Secret Requirements:''' '''Unit Acquisition:'''
*Banpreios adds Aya as a Subpilot
**Branpreios gains the "Tenjou Tenge Nendou Musou-ken" attack
**Branpreios and R-GUN Powered gain the "Tenjou Tenge Ichigeki Hissatsu-ho" combination attack
*Shumel (Lyria)
*Bemidoban (Baran)

|-
| colspan="3" class="fc-std-sc" |'''第５５話：まつろわぬ神 Scenario 55 - The God Who Resists Order'''

|-
| colspan="3" |'''Victory Condition:'''
*1st Part: (1) Defeat all enemies; (2) Defeat Gebel GanEden
*2nd Part: (1) Defeat all enemies; (2) Defeat Gebel GanEden
'''Defeat Condition:'''
*1st Part: (1)(2) Ally battleship is defeated
*2nd Part: (1)(2) Ally battleship is defeated
'''Skill Point:''' Within 6 turns, defeat both Zfiruds '''Secret Requirements:''' '''Unit Acquisition:'''

|-
| colspan="3" class="fc-std-sc" |'''第５６話：終わりなき総力戦 Scenario 56 - Unending Total War'''

|-
| colspan="3" |'''Victory Condition:'''
*1st Part: Drowa Zan is defeated within 5 turns
*2nd Part: (1) Soloship move next to the Bairal Jinn; (2) Any unit reaches the designated point
'''Defeat Condition:'''
*1st Part: Ally battleship is defeated, 6th turn is reached
*2nd Part: (1)(2) Ally battleship is defeated
'''Skill Point:''' Clear the map within 7 turns. '''Secret Requirements:'''
*Gije & Ganga Rube
**You must pick the Fight The Buff Clan option at the end of the scenario.
*Bad Ending Route
**On New Game+, choose to fight (first option)
'''Unit Acquisition:'''

|- class="fc-route-h"
| width="40%" |'''Fight The Buff Clan''' Ideon, Getter Robo Combattler V, Voltes V, Daimos Daitarn 3 Gundam (0083, Zeta, ZZ, CCA, Wing, SEED)
| width="40%" |'''Fight The STMC''' Mazinger (Z, Great), Steel Jeeg, Raiden Goshogun, Dancouga, Gaiking Macross (DYRL, Plus, 7) Gunbuster, Evangelion, GaoGaiGar Virtual On
| width="20%" |'''Bad Ending '''

|-
| class="fc-route1" |'''第５７話：憎しみの環の中で Scenario 57 - In a Circle of Hatred'''
| class="fc-route3" |'''第５７話：終わりの始まり Scenario 57 - The Beginning of the End'''
| class="fc-prologue" |'''イデ発動ルート最終話：銀河に君と''' '''Ide Activation Final Scenario - With You In The Galaxy'''

|-
|'''Victory Condition:'''
*1st Part: (1) Defeat all enemies; (2) Soloship reaches the designated point
*2nd Part: Defeat all enemies within (11 (E) / 9 (N) / 7 (H)) turns
'''Defeat Condition:'''
*1st Part: (1)(2) All allies are defeated
*2nd Part: Turn (12 (E) / 10 (N) / 8 (H)) is reached, Ally battleship is defeated
'''Skill Point:''' Defeat all enemies within (10 (E) / 8 (N) / 6 (H)) turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Ganga Rube (Gije)

|'''Victory Condition:''' (1)(2) Defeat all enemies '''Defeat Condition:''' (1) Eltrium is defeated; (2) Ally battleship is defeated '''Skill Point:''' Defeat all enemies within 7 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Eltrium (Tashiro, Deputy Chief)

| rowspan="4" |'''Victory Condition:''' Bairal Jinn is defeated '''Defeat Condition:''' Ally battleship is defeated '''Secret Requirements:''' '''Unit Acquisition:'''

|-
| class="fc-route1" |'''第５８話：発動 Scenario 58 - Activation'''
| class="fc-route3" |'''第５８話：死闘、未来を懸けて Scenario 58 - The Mortal Struggle for the Future'''

|-
|'''Victory Condition:'''
*1st Part: Bairal Jinn is defeated
*2nd Part: Bairal Jinn is defeated
'''Defeat Condition:'''
*1st Part: Ally battleship is defeated
*2nd Part: Ally battleship is defeated
'''Skill Point:''' Destroy the Bairal Jinn within six turns. '''Secret Requirements:''' '''Unit Acquisition:'''

|'''Victory Condition:''' (1)(2) Defeat all enemies '''Defeat Condition:''' (1) Ally battleship is defeated; Drowa Zan is defeated, Ally battleship is defeated(2) '''Skill Point:''' All Buff Clan units survive the stage. '''Secret Requirements:''' '''Unit Acquisition:'''

|}
 

==Stages 59 - END==
{| width="100%"
|-
| colspan="2" class="fc-std-sc" |'''第５９話：果てしなき流れの果てに Scenario 59 - At the End of the Unending Flow'''

|-
| colspan="2" |'''Victory Condition:'''
*1st Part: Reach the 11th turn
*2nd Part: Defeat all enemies, 6th turn is reached
'''Defeat Condition:'''
*1st Part: Ally battleship is defeated, Any enemy enters the designated area
*2nd Part: Any enemy enters the designated area, Ally battleship is defeated, Noriko or Jung are defeated
'''Skill Point:''' Defeat all enemies within 5 turns. '''Secret Requirements:''' '''Unit Acquisition:'''

|- class="fc-route-h"
| width="50%" |'''Normal Ending - 56 Skill Points or less, OR turn count 421 or more'''
| width="50%" |'''Good Ending - 57 Skill Points or more AND turn count 420 or less'''

|-
| class="fc-route1" |'''最終話: 終焉の銀河 Final Scenario - A Galaxy of Death'''
| class="fc-route3" |'''最終話: 今遥か遠い彼方… Final Scenario - Now, The Faraway Yonder'''

|-
|'''Victory Condition:''' (1) ??? is destroyed; (2) Kaiser Ephres is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated '''Secret Requirements:''' '''Unit Acquisition:'''

|'''Victory Condition:''' (1) ??? is destroyed; (2)(3) Kaiser Ephres is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated; (3) Irui is defeated '''Secret Requirements:''' '''Unit Acquisition:'''
*Nashim Gan Eden (Irui)

|}

Super Robot Wars/Alpha 3/Upgrade Carryover

2023-07-06T17:13:53Z

KomodoWork: Add Selena units upgrade carryover and ajusting the order

'''Upgrade Carryover'''
{|
|-
! Former Mech !! Carries over to
|-
| Gundam Stamen (Dendrobium) || Neue Ziel Gerbera Tetra Val Varo
|-
| ZZ Gundam || Doben Wolf Geymalk
|-
| Qubeley Mk.2(Purple) || Qubeley Mass Production Qubeley(Puru)
|-
| Qubeley Mk-II(Red) || Quin Mansa Mass Production Qubeley(Puru Two)
|-
| Nu Gundam || Hi-Nu Gundam
|-
| Strike Gundam || Strike Rouge Freedom Gundam Buster Gundam
|-
| Freedom Gundam || Justice Gundam
|-
| Buster Gundam || Duel Gundam
|-
| Moebius Zero || Skygraspers (both units)
|-
| Mazinger Z || Mazinkaiser
|-
| Getter Robo G || Shin Getter
|-
| GaoGaiGar (GaoFighGar) || Genesic GaoGaiGar & J-Ark
|-
| Gamlin's VF-17D || Gamlin's VF-17F
|-
| VF-17 Nightmares || VF-19 Excaliburs
|-
| Battle 7 || VF-22S Sturmvogel II (both units)
|-
| RaiOh || DaiRaioh (Touma route only)
|-
| Wildfalken || Wildwurger (Cobray route only)
|-
| Mass Production Nu Gundam (Cobray's) || Werkbau (Cobray route only)
|-
| AS Soleares || AS Alegrias (Selena route only)
|-
| Vegalion || Altairlion (Selena route only)
|-
| R-Blade Custom || SRX Banpreios
|}

'''Shared Upgrades'''
{|
|-
! First Unit !! Second Unit !! Third Unit
|-
| Gundam Stamen || GP03 Dendrobium ||
|-
| Gundam Mk-II* || Super Gundam ||
|-
| ZZ Gundam || Full Armor ZZ Gundam ||
|-
| Nu Gundam || Nu Gundam HWS ||
|-
| MP Nu Gundam (I) || MP Nu Gundam (F) ||
|-
| Strike Gundam || Aile Strike Gundam Sword Strike Gundam Launcher Strike Gundam ||
|-
| Strike Rouge || Aile Strike Rouge Sword Strike Rouge Launcher Strike Rouge IWSP Strike Rouge ||
|-
| Skygrasper || Aile Skygrasper Sword Skygrasper Launcher Skygrasper ||
|-
| Dancougar || Final Dancougar ||
|-
| EnRyu || HyoRyu || ChoRyujin
|-
| AnRyu || KouRyu || TenRyujin
|-
| Shin RyuKoOh || Shin KoRyuOh ||
|-
| Vegalion || Altairlion || Hyperlion
|}

==Notes:==

In all those cases (except Cobray's Nu Gundam) you get to keep the former machine(s).

Mass Produced Quebeleys` upgrades carry over directly from each Quebeley Mk.2 (there are two of them). Same with Nightmare and Excalibur VFs.

In some routes you get Mazinkaiser and Shin Getter-1 before Mazinger Z and Getter Dragon, in this case upgrades carry over from Kaiser and Shin to Z and Dragon.

There are units who share upgrades between them (so when you upgrade one another automatically upgrades too), Dragon Sisters and Dragon Brothers from Gaogaigar.

The Super Gundam shares upgrades with the Gundam Mk-II that has equipped the G-Defensor parts.

UNCONFIRMED:Raiko Kai's upgrades are not refunded when Kusuha upgrades to Shin RyuKoOh.

Super Robot Wars/Alpha 3/Flow Chart

2023-07-06T15:03:03Z

KomodoWork: /* Stages 19 - 33 */ Missing a victory condition on Stage 33 (Alaska)

Units and Pilots in Black join your team. 
Units and Pilots in Orange are available for that stage, then leave. 
Units and Pilots in Blue have special requirements. Check the [[../Secrets|Secrets]] page for more details. 
Units and Pilots in Red previously joined, but from this point, are rendered unusable. Those lost permanently are marked so, while others rejoin later on. 
Information in Green are upgrades for units already in your party.

==Stages 01 - 18==
{| width="100%"
|- class="fc-route-h"
| width="25%" |'''Touma Route'''
| width="25%" |'''Kusuha Route'''
| width="25%" |'''Cobray Route'''
| width="25%" |'''Selena Route'''

|-
| class="fc-route1" |'''第１話：闘志、炎に燃ゆる Scenario 1 - Within the Flames, Fighting Spirit Rises'''
| class="fc-route2" |'''第１話：出撃！鋼の龍虎 Scenario 1 - Launch! Dragon and Tiger of Steel'''
| class="fc-route3" |'''第１話：虚空からの転生 Scenario 1 - Reincarnated from the Void'''
| class="fc-route4" |'''第１話：シークレット・ミッション Scenario 1 - Secret Mission'''

|-
|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Any allied unit is defeated '''Skill Point:''' Defeat all enemies in 3 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Raioh (Touma)
*GaoGaiGar (Guy)
*Goldymarg (Goldymarg)
*HyoRyu (HyoRyu)
*EnRyu (EnRyu)

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Any allied unit is defeated '''Skill Point:''' Defeat all enemies in 2 turns '''Secret Requirements:'''
*Bullet
**You must be playing as Kusuha to recruit Bullet.
'''Unit Acquisition:'''
*Gouryu Kai (Kusuha)
*Raikou Kai (Bullet)
*Mazinkaiser (Kouji)
*Diana A (Sayaka)
*Shin Getter (Ryoma, Hayato, Benkei)
*Lady Command (Michiru)

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' (1) Werkbau is defeated; (2) Werkbau is defeated, ally battleship is defeated '''Skill Point:''' Defeat all enemies in 5 turns after enemy reinforcements show up '''Secret Requirements:'''
*Arado and Seolla
**You must be playing as Cobray to recruit Arado and Seolla.
'''Unit Acquisition:'''
*Werkbau (Cobray)
*Nu Gundam (Amuro)
*Ra Cailum (Bright, Torres)
*MP Nu Gundam (Kayra)
*Jegan (Katz)
*Incom & Funnel parts for MP Nu Gundam

|'''Victory Condition:''' (1) All enemies except Salamis Kai shot down; (2) R-Gun Powered shot down '''Defeat Condition:''' (1) Selena shot down, Salamis Kai shot down; (2) Selena shot down '''Skill Point:''' Defeat all enemies except the Salamis Kai in 4 turns '''Secret Requirements:'''
*Ibis and Slay
**You must be playing as Selena to recruit Ibis and Slay.
'''Unit Acquisition:'''
*AS Soleares (Selena, Elma)
*Albion (Synapse, Paserov)
*GP03 Dendrobium (Kou)
*GM Cannon II (Keith)
*GM Custom (Burning)
*GM Custom (Bate)
*GM Custom (Monsha)
*GM Cannon II (Adel)
*Zeta Gundam (Kamille)
*Re-GZ BWS (Four)
*Methuss (Fa)
*Super Gundam (Emma)
*Armed Fortress Orchis parts for Gundam Stamen
*G Defensor parts for Gundam Mk-II

|-
| class="fc-route1" |'''第２話: さらばGGG、さらば勇者 Scenario 2 - Farewell, GGG! Farewell, Braves!'''
| class="fc-route2" |'''第２話: 新たなる侵略者！立ち上がれV Scenario 2 - New Invaders! Rise Up, V!'''
| class="fc-route3" |'''第２話: 血の狼煙 Scenario 2 - Beacon Fire of Blood'''
| class="fc-route4" |'''第２話: フラッシュ・デイ Scenario 2 - Flash Day'''

|-
|'''Victory Condition:''' Defeat all enemies; Defeat ZX-01 '''Defeat Condition:''' Any allied unit is defeated '''Skill Point:''' Defeat the 4 Zonders in 2 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*GaoGaiGar (Guy)
*J-Der (J, Tomoro)
*Great Mazinger (Tetsuya)
*Venus A (Jun)
*Boss Borot (Boss, Nuke, Mucha)
*Kotetsu Jeeg (Jeeg)
*Big Shooter (Miwa)

|'''Victory Condition:''' (1) Defeat all enemies, (2) Defeat Dangel '''Defeat Condition:''' (1) Hyouma defeated (2) Any Allied Unit is defeated '''Skill Point:''' Defeat all enemies in 3 turns, do not lose any Federation Army squads '''Secret Requirements:''' '''Unit Acquisition:'''
*Combattler V (Hyoma, Juzo, Daisaku, Chizuru, Kosuke)
*Jegan (Federation Soldier) x 3

|'''Victory Condition:''' (1) Defeat the Magellan Kai-class Battleship (2) Defeat the Magellan Kai-class Battleship and Nuclear Missiles '''Defeat Condition:''' (1) Any ally unit is defeated (2) Nuclear Missiles reach the marked area on the map '''Skill Point:''' Defeat the enemy missiles and battleship in 7 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Clop-class (Federation Captain)
*Wildfalken (Seolla)
*MP Nu Gundam (Cobray)
*ZZ Gundam (Judau)
*Re-GZ BWS (Roux)
*Albion (Synapse, Paserov)
*GP03 Dendrobium (Kou)
*GM Cannon II (Keith)
*GM Custom (Burning)
*GM Custom (Bate)
*GM Custom (Monsha)
*GM Cannon II (Adel)
*Zeta Gundam (Kamille)
*Re-GZ BWS (Four)
*Methuss (Fa)
*Super Gundam (Emma)
*Armed Fortress Orchis parts for Gundam Stamen
*G Defensor Parts for Gundam Mk-II

|'''Victory Condition:''' Defeat any enemy battleship '''Defeat Condition:''' (1) Allied battleship is defeated; (2) Allied battleship is defeated, Selena is defeated '''Skill Point:''' Defeat the enemy battleship in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*ZZ Gundam (Judau)
*Re-GZ BWS (Roux)
*Nu Gundam (Amuro)
*Ra Cailum (Bright)
*Jegan (Katz)
*MP Nu Gundam (Keyra)
*AS Soleares (Selena, Elma)
*Incom & Funnel parts for MP Nu Gundam

|-
| colspan="4" class="fc-std-sc" |'''第３話: 逆襲！機界31原種 Scenario 3 - Counterattack! The 31 Machine Primevals!'''

|-
| colspan="4" |'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' (1) Ally battleship is defeated, One of the Machine Primevals reaches the edge of the map; (2) Ally battleship is defeated, One of the Machine Primevals reaches the edge of the map, J is defeated '''Skill Point:''' Defeat all enemies in 6 turns '''Secret Requirements:''' '''Unit Acquisition (Touma & Kusuha):'''
*J-Ark (J, Tomoro)
*Nu Gundam (Amuro)
*Ra Cailum (Bright, Torres)
*Jegan (Katz)
*MP Nu Gundam (Keyra)
*Albion (Synapse, Paserov)
*GP03 Dendrobium (Kou)
*GM Cannon II (Keith)
*GM Custom (Burning)
*GM Custom (Bate)
*GM Custom (Monsha)
*GM Cannon II (Adel)
*Zeta Gundam (Kamille)
*Re-GZ BWS (Four)
*Methuss (Fa)
*Super Gundam (Emma)
*Incom & Funnel parts for MP Nu Gundam
*Armed Fortress Orchis parts for Gundam Stamen
*G Defensor Parts for Gundam Mk-II
'''Unit Acquisition (Cobray & Selena):'''
*J-Ark (J, Tomoro)
*Mazinkaiser (Kouji)
*Diana A (Sayaka)
*Great Mazinger (Tetsuya)
*Venus A (Jun)
*Combattler V (Hyoma, Juzo, Daisaku, Chizuru, Kosuke)
*Koutetsu Jeeg (Jeeg)
*Big Shooter (Miwa)
*Shin Getter (Ryoma, Hayato, Benkei)
*Lady Command (Michiru)

|-
| colspan="4" class="fc-std-sc" |'''第４話：地獄門、開く Scenario 4 - The Gates of Hell Open'''

|-
| colspan="4" |'''Victory Condition:'''
*1st Part: Allied Battleship reaches the escape point in 5 turns, All Enemies are defeated in 5 turns
*2nd Part: Defeat all enemies
'''Defeat Condition:'''
*1st Part: Allied Battleship is defeated, Turn 6 starts
*2nd Part: SRX is defeated
'''Skill Point:''' Defeat all enemies in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*SRX (Damaged) (Ryuusei, Rai, Aya)

|-
| colspan="4" class="fc-std-sc" |'''第５話: 地球圏絶対防御線 Scenario 5 - The Earth Sphere’s Absolute Defense Line'''

|-
| colspan="4" |'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' (1) Ally battleship is defeated (2) Any allied unit is defeated '''Skill Point:''' Clear the stage in 6 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Moebius Zero (Mwu)
*All Char's Counter Attack, Stardust Memory, and Zeta Gundam units are lost <ul><li>Nu Gundam(Amuro)</li><li>Ra Cailum (Bright, Torres)</li><li>MP Nu Gundam (Keyra)</li><li>Albion (Synapse, Paserov)</li><li>GP03 Dendrobium (Kou)</li><li>GM Cannon II (Keith)</li><li>GM Custom (Burning)</li><li>GM Custom (Bate)</li><li>GM Custom (Monsha)</li><li>GM Cannon II (Adel)</li><li>Zeta Gundam (Kamille)</li><li>Re-GZ BWS (Four)</li><li>Methuss (Fa)</li><li>Super Gundam (Emma)</li><li>Jegan (Katz)</li></ul>

|- class="fc-route-h"
|'''Touma Route''' Great Mazinger, Venus A, Boss Borot Steel Jeeg, Big Shooter
|'''Kusuha Route''' Getter Robo G, Lady Command Mazinger Z, Diana A Combattler V
|'''Cobray Route''' ZZ Gundam, ReGZ (BWS) Moebius Zero
|'''Selena Route'''
|-
| class="fc-route1" |'''第６話：平和、遥か遠く Scenario 6 - A Faraway Peace'''
| class="fc-route2" |'''第６話：北米戦線、異常アリ Scenario 6 - Abnormalities on the North American Front'''
| class="fc-route3" |'''第６話：GUNDAM出撃 Scenario 6 - Gundam, Sortie'''
| class="fc-route4" |'''第６話：ザ・ビギニング Scenario 6 - The Beginning'''

|-
|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Any ally is defeated '''Skill Point:''' Defeat all enemies in 5 turns; Defeat the Yamata no Orochi last '''Secret Requirements:''' '''Unit Acquisition:'''
*GaiGar (Gai)
*Mic Sounders XIII (Mic Sounders XIII)

|'''Victory Condition:''' (1) Ally reaches the designated area; (2) Defeat all enemies '''Defeat Condition:''' Any ally defeated '''Skill Point:''' Reach target location without engaging in combat '''Secret Requirements:''' '''Unit Acquisition:'''
*Mazinkaiser → Mazinger Z (Kouji)
*Shin Getter Robo → Getter Robo G (Ryoma, Hayato, Benkei) 
*Dancouga (Shinobu, Sara, Masato, Ryo)

|'''Victory Condition:'''
*1st Part: Sigu is defeated, Vesalius is defeated
*2nd Part: Defeat all enemies 
'''Defeat Condition:'''
*1st Part: Any ally is defeated
*2nd Part: Any ally is defeated 
'''Skill Point:''' Accomplish either objective in 4 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Clop Class Battleship (Federation Officer)
*Wing Gundam Zero (Heero)
*Gundam Deathscythe Hell (Duo)
*Gundam Sandrock Kai (Quatre)
*Taurus (Hilde)
*Strike Gundam (Kira)

|'''Victory Condition:''' (1) AS Soleares reaches the designated point in 4 turns; (2) Defeat all enemies '''Defeat Condition:''' (1) Begin turn 5 without meeting victory conditions, Any ally is defeated; (2) Any ally is defeated '''Skill Point:''' Defeat all enemies in 4 turns and get the AS Soleares to the target square '''Secret Requirements:''' '''Unit Acquisition:'''
*CGUE (Rau)
*GINN (ZAFT Soldier) x 2
*Vesarius (Ades)

|-
| class="fc-route1" |'''第７話：燃えろ宙！妖花フローラの挑戦 Scenario 7 - Space Burns! The Enchanting Flora’s Challenge!'''
| class="fc-route2" |'''第７話：怒りの獣、野生の咆哮 Scenario 7 - The Wild Roar of the Raging Beast'''
| class="fc-route3" |'''第７話：崩壊の大地 Scenario 7 - Collapsing Land'''
| class="fc-route4" |'''第７話：ワンズ・ジャスティス Scenario 7 - One’s Own Justice'''

|-
|'''Victory Condition:''' 
*1st Part: Defeat all enemies
*2nd Part: Defeat all enemies
'''Defeat Condition:''' 
*1st Part: Any ally defeated
*2nd Part: Any ally defeated
'''Skill Point:''' Defeat all enemies in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*AnRyu (AnRyu)
*KouRyu (KouRyu)

|'''Victory Condition:''' (1) Defeat all enemies; (2) Defeat Dangel '''Defeat Condition:''' Any ally is defeated '''Skill Point:''' Defeat all Zubanzas, Boazan Flying Saucers, and Red Baloms within 4 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Black Wing (Alan)

|'''Victory Condition:''' (1) Defeat all enemies; (2) Archangel reaches the designated point, Defeat all enemies '''Defeat Condition:''' (1) Mwu is defeated; (2) Ally battleship is defeated, Kira or Mwu are defeated '''Skill Point:''' Defeat all enemies in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Strike Gundam (Kira)
*Archangel (Murrue, Natarle)
*Aile, Sword and Launcher Striker packs for Strike Gundam

|'''Victory Condition:''' Any ally reaches the designated point '''Defeat Condition:''' Any ally is defeated '''Skill Point:''' Defeat all enemies in 5 turns and get an allied unit to the target square '''Secret Requirements:''' '''Unit Acquisition:'''
*Gundam Heavyarms Kai (Trowa)
*Altron Gundam (Wufei)
*CGuE (Rau)
*Vesarius (Ades)
*Aegis Gundam (Athrun)
*Blitz Gundam (Nicol)
*Buster Gundam (Dearka)
*Duel Gundam (Yzak)

|-
| class="fc-route1" |'''第８話：立ち上がれ！勇気ある者達 Scenario 8 - Stand Up, People of Courage!'''
| class="fc-route2" |'''第８話：輝け！不死身の勇者 Scenario 8 - Shine, Undying Hero!'''
| class="fc-route3" |'''第８話：誘う声 Scenario 8 - An Inviting Voice'''
| class="fc-route4" |'''第８話：インビジブル・イントルーダー Scenario 8 - Invisible Intruder'''

|-
|'''Victory Condition:''' (1) Defeat all enemies; (2) ZX-02 is defeated '''Defeat Condition:''' (1) Any ally is defeated; (2) Gai is defeated, J is defeated '''Skill Point:''' Defeat all enemies in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*GaiGar → GaoGaiGar
*Mic Sounders XIII gains "Disc P", "Disc M", and "Disc X" attacks
*Goldymarg (Goldymarg)
*HyoRyu (HyoRyu)
*EnRyu (EnRyu)
*Big Volfogg (Big Volfogg)

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' (1) Any ally is defeated; (2) Akira is defeated '''Skill Point:''' Defeat the Bramble (retreats at 4000HP (E) / 6000HP (N) / 8000HP (H)) '''Secret Requirements:''' '''Unit Acquisition:'''
*Raideen (Akira)
*Bluegar (Jinguji, Mari)

|'''Victory Condition:'''
*1st Part: (1) Vesalius is defeated; (2) Defeat all enemies
*2nd Part: (1) Defeat all enemies; (2) Defeat all enemies except Valk Baal 
'''Defeat Condition:'''
*1st Part: Ally battleship is defeated, Seolla or Cobray are defeated
*2nd Part: Any ally is defeated 
'''Skill Point:''' Defeat Aegis, Duel, Buster, and Blitz Gundams in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Zeta Gundam (Kamille)
*Re-GZ BWS (Four)
*Methuss (Fa)
*Super Gundam (Emma)
*Ra Cailum (Bright, Torres)
*MP Nu Gundam (Cobray)
*Werkbau (Cobray)
*G Defensor parts for Gundam Mk-II

|'''Victory Condition:''' Reach turn 6 '''Defeat Condition:''' Any ally is defeated '''Skill Point:''' Defeat all the Jegans '''Secret Requirements:''' '''Unit Acquisition:'''
*CGuE (Rau)
*Vesarius (Ades)
*Aegis Gundam (Athrun)
*Blitz Gundam (Nicol)
*Buster Gundam (Dearka)
*Duel Gundam (Yzak)

|-
| class="fc-route1" |'''第９話：内なる修羅 Scenario 9 - Demons of War Within'''
| class="fc-route2" |'''第９話：再会！ニューヨーク解放戦 Scenario 9 - Reunion! The Battle to Retake New York'''
| class="fc-route3" |'''第９話：正義の在処 Scenario 9 - Where Justice Can Be Found'''
| class="fc-route4" |'''第９話：アベンジャー Scenario 9 - Avenger'''

|-
|'''Victory Condition:''' (1) Defeat all enemies; (2) Defeat Raioh '''Defeat Condition:''' (1) Any ally defeated; (2) Sanger is defeated '''Skill Point:''' Defeat the Bramble in 4 turns (retreats at 4000HP (E) / 6000HP (N) / 8000HP (H)) '''Secret Requirements:''' '''Unit Acquisition:'''
*Dygenguar (Sanger)
*Huckebein Mk-III Trombe (Ratsel)
*Raideen (Akira)
*Bluegar (Jingunji, Mari)
*Mazinger Z (Kouji)
**Mazinger Z (Kouji) and Great Mazinger (Tetsuya) gain the "Double Mazinger Blade" and "Double Burning Fire" combination attacks
*Diana A (Sayaka)
*Getter Robo G (Ryoma, Hayato, Benkei)
*Lady Command (Michiru)
*Combattler V (Hyoma, Juzo, Daisaku, Chizuru, Kosuke)

|'''Victory Condition:''' (1) Defeat all enemies; (2) Dancouga reaches the designated point; (3) Defeated Deathgaia, Dangel, and Warchamedes '''Defeat Condition:''' (1) Shinobu, Kusuha, or Bullet are defeated; (2) Shinobu, Kusuha, Bullet, or Alan are defeated; (3) Alan is defeated '''Skill Point:''' Clear the map in 8 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Black Wing (Alan)
*Dygenguar (Sanger)
*Huckebein Mk-III Trombe (Ratsel)

|'''Victory Condition:''' (1) Vesalius is defeated; Reduce the Muge Battleship under 2000 HP before it reaches the edge of the map '''Defeat Condition:''' (1) Ally battleship is defeated; (2) Muge Battleship reaches the western edge of the map '''Skill Point:''' Defeat all enemies before reducing the Muge Mothership's HP below 2000 or defeating it '''Secret Requirements:''' '''Unit Acquisition:'''

|'''Victory Condition:''' (1) Reduce the Archangel's HP to 50% or less, Defeat all enemies besides the Archangel; (2) Reduce the Varuch Ishar to 4000 HP or less. '''Defeat Condition:''' Any ally is defeated '''Skill Point:''' Defeat the Varuch Ishar (flees at 4000 HP) '''Secret Requirements:''' '''Unit Acquisition:'''
*CGuE (Rau)
*Vesarius (Ades)
*Aegis Gundam (Athrun)
*Blitz Gundam (Nicol)
*Buster Gundam (Dearka)
*Duel Gundam (Yzak)

|-
| class="fc-route1" |'''第１０話：激震の地底帝国 Scenario 10 - Tremors in the Underground Empire'''
| class="fc-route2" |'''第１０話：龍を喰らうもの Scenario 10 - That Which Devours the Dragon'''
| class="fc-route3" |'''第１０話：消えていく光 Scenario 10 - The Fading Light'''
| class="fc-route4" |'''第１０話：グッバイ・フレンズ Scenario 10 - Goodbye, Friends'''

|-
|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' All allies defeated, Science Fortress Lab destroyed '''Skill Point:''' Clear the map without the Science Fortress Lab taking damage '''Secret Requirements:''' '''Unit Acquisition:'''
*Raioh loses the "System LIOH" ability
*Raioh gains the "Rising Meteor" attack
*Dygenguar (Sanger)
*Huckebein Mk-III Trombe (Ratsel)

|'''Victory Condition:''' (1) Sanger is defeated; (2)(3) Defeat all enemies; (4)(5) ZX-02 is defeated '''Defeat Condition:''' (1) Bullet is defeated; (2) Sanger or Rastel are defeated; (3) Any ally is defeated; (4) Guy, Sanger, or Rastel are defeated; (5) Guy, J, Sanger, or Rastel are defeated '''Skill Point:''' Reduce Shin RyuOuKi to below 10000 HP within 3 turns of its arrival '''Secret Requirements:''' '''Unit Acquisition:'''
*Dygenguar (Sanger)
*Huckebein Mk-III Trombe (Ratsel)
*GaiGar (Guy)
*GaoGaiGar (Guy)
*Mic Sounders XIII (Mic Sounders XIII)
*Goldymarg (Goldymarg)
*HyoRyu (HyoRyu)
*EnRyu (Enryu)
*Volfogg (Volfogg)
*Great Mazinger (Tetsuya)
*Venus A (Jun)
*Boss Borot (Boss, Mucha, Nuke)
*Kotetsu Jeeg (Jeeg)
*Big Shooter (Miwa)
*Stealth Gao II parts for GaoGaiGar
*Gunbot parts for Volfogg

|'''Victory Condition:''' (1) Reduce the Blitz Gundam to under 7000HP; (2) The Gamow is defeated; (3) The Gamow is defeated and Imperial Guard are defeated '''Defeat Condition:''' (1)(2) Any ally is defeated; (3) Ally battleship is defeated '''Skill Point:''' Defeat the Gamow (retreats at 4000HP (E) / 6000HP (N) / 8000HP (H)) '''Secret Requirements:''' '''Unit Acquisition:'''
*Qubeley Mk-II (Puru)
*Qubeley Mk-II (Puru Two)
*Hyaku Shiki (Beecha)
*Gundam Mk-II (Elle)
*Jegan (Mondo)
*Megarider (Iino)
*YF-19 (Isamu)
*YF-21 (Guld)

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' (1) Any ally is defeated; (2) Ally battleship is defeated; (3) Ally battleship is defeated, Isamu or Guld are defeated '''Skill Point:''' Clear the map in 6 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Zeta Gundam (Kamille)
*Methuss (Fa)
*ReGZ (Four)
*Super Gundam (Emma)
*Archangel (Murrue, Natarle)
*Strike Gundam (Kira)
*Moebius Zero (Mwu)
*Aile, Sword, and Launcher Striker packs for Strike Gundam
*Wing Gundam Zero (Heero)
*Gundam Deathscythe Hell (Duo)
*Gundam Sandrock Kai (Quatre)
*Taurus (Hilde)
*ZZ Gundam (Judau)
*ReGZ BWS (Roux)
*Qubeley Mk-II (Puru)
*Qubeley Mk-II (Puru Two)
*Hyaku Shiki (Beecha)
*Gundam Mk-II (Elle)
*Jegan (Mondo)
*Megarider (Iino)
*YF-19 (Isamu)
*YF-21 (Guld)

|-
| class="fc-route1" |'''第１１話：戦場の邂合、そして決別 Scenario 11 - An Battlefield Encounter, and Then a Departure'''
| class="fc-route2" |'''第１１話：新たなる人類 Scenario 11 - A New Mankind'''
| class="fc-route3" |'''第１１話：君と戦場で Scenario 11 - On the Battlefield with You'''
| class="fc-route4" |'''第１１話：パワー・ジャンクション Scenario 11 - Power Junction'''

|-
|'''Victory Condition:''' (1) Defeat all enemies; (2) Defeat Vesalius '''Defeat Condition:''' Ally battleship is defeated, Kira or Mwu are defeated '''Skill Point:''' Defeat all enemies in 7 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Archangel (Murrue, Natarle)
*Strike Gundam (Kira)
*Moebius Zero (Mwu)
*Stealth Gao II Parts for GaoGaiGar
*Aile, Sword, and Launcher Striker packs for Strike Gundam

|'''Victory Condition:''' (1) Defeat all enemies; (2) Vesalius is defeated '''Defeat Condition:''' (1) Ally battleship is defeated, Kira or Mwu are defeated; (2) Ally battleship is defeated '''Skill Point:''' Defeat all enemies in 7 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Strike Gundam (Kira)
*Moebius Zero (Mwu)
*Archangel (Murrue, Natarle)
*YF-19 (Isamu)
*YF-21 (Guld)
*Aile, Sword, and Launcher Striker packs for Strike Gundam

|'''Victory Condition:''' (1) Defeat all enemies (2) ZX-02 is defeated '''Defeat Condition:''' (1) Kira is defeated; (2) Any ally is defeated '''Skill Point:''' Defeat all enemies in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Wildburger (Arado)
*Great Mazinger (Tetsuya)
*Venus A (Jun)
*Boss Borot (Boss)
*Dancouga (Shinobu, Sarah, Masato, Ryo)
*Raideen (Akira)
*Bluegar (Jingunji)
*Mazinger Z (Kouji)
*Diana A (Sayaka)
*Getter Robo G (Ryoma, Hayato, Benkei)
*Lady Command (Michiru)
*Star Gaogaigar (Gai)
*Goldymarg (Goldymarg)
*Mic Sounders the 13th (Mic)
*Hyoryu (Hyoryu)
*Enryu (Enryu
*Big Volfogg (Volfogg)

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Defeat all enemies in 7 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Ra Cailum (Bright, Torres)
*Great Mazinger (Tetsuya)
*Venus A (Jun)
*Boss Borot (Boss)
*Dancouga (Shinobu, Sarah, Masato, Ryo)
*Raideen (Akira)
*Bluegar (Jingunji)
*Mazinger Z (Kouji)
*Diana A (Sayaka)
*Getter Robo G (Ryoma, Hayato, Benkei)
*Lady Command (Michiru)
*Star Gaogaigar (Gai)
*Goldymarg (Goldymarg)
*Mic Sounders the 13th (Mic)
*Hyoryu (Hyoryu)
*Enryu (Enryu
*Big Volfogg (Volfogg)

|-
| class="fc-route1" |'''第１２話：守るべきモノ Scenario 12 - What You Must Protect'''
| class="fc-route2" |'''第１２話：別れの宇宙 Scenario 12 - Farewells in Space'''
| class="fc-route3" |'''第１２話：ディーンの火 Scenario 12 - The Flames of Deen'''
| class="fc-route4" |'''第１２話：コンクルージョン Scenario 12 - Conclusion'''

|-
|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' All enemies defeated '''Skill Point:''' Defeat all enemies in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Wing Gundam Zero (Heero)
*Gundam Deathscythe Hell (Duo)
*Gundam Sandrock Kai (Quatre)
*Gundam Heavyarms Kai (Trowa)
*Altron Gundam (Wufei)
*Taurus (Hilde)
*Zeta Gundam (Kamille)
*Re-GZ BWS (Four)
*Methuss (Fa)
*Gundam Mk-II (Emma)
*ZZ Gundam (Judau)
*Qubeley Mk-II (Puru)
*Qubeley Mk-II (Puru Two)
*Hyaku Shiki (Beecha)
*Gundam Mk-II (Elle)
*Jegan (Mondo)
*Megarider (Iino)
*YF-19 (Isamu) (After stage)
*YF-21 (Guld) (After stage)
*G Defensor parts for Gundam Mk-II

|'''Victory Condition:''' (1) Defeat all enemies; (2) Defeat Shin RyoOhKi; (3) Defeat the Imperial Guard '''Defeat Condition:''' (1)(2) Any ally is defeated; (3) Ally battleship is defeated '''Skill Point:''' Defeat Shin RyuOhKi before Victory Conditions are met '''Secret Requirements:''' '''Unit Acquisition:'''
*Wing Gundam Zero (Heero)
*Gundam Deathscythe Hell (Duo)
*Gundam Sandrock Kai (Quatre)
*Gundam Heavyarms Kai (Trowa)
*Altron Gundam (Wufei)
*Taurus (Hilde)
*Zeta Gundam (Kamille)
*Re-GZ BWS (Four)
*Methuss (Fa)
*Gundam Mk-II (Emma)
*ZZ Gundam (Judau)
*Qubeley Mk-II (Puru)
*Qubeley Mk-II (Puru Two)
*Hyaku Shiki (Beecha)
*Gundam Mk-II (Elle)
*Jegan (Mondo)
*Megarider (Iino)
*G Defensor parts for Gundam Mk-II

|'''Victory Condition:''' (1) Bramble, Magnum, and Zangaioh are defeated; (2) Defeat all enemies; (3) Defeat Valk Baal '''Defeat Condition:''' (1) Ally battleship is defeated, Arado is defeated; (2) Cobray, Arado or Seolla are defeated; (3) Cobray, Viletta, Sanger, or Rastel are defeated '''Skill Point:''' Clear the map in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Werkbau gains the "Axion Buster" attack
*Gundam Heavyarms Kai (Trowa)
*Altron Gundam (Wufei)
*Dygenguar (Sanger)
*Huckebein Mk-III Trombe (Ratsel)
*R-GUN Powered (Viletta)

|'''Victory Condition:''' (1)(2) ZX-08 is defeated; (3) Varuch Ishar is defeated '''Defeat Condition:''' (1) Ally battleship is defeated, (2) Ally battleship is defeated, J is defeated; (3) Ally battleships is defeated, Selena, Viletta, Sanger, or Rastel are defeated '''Skill Point:''' Defeat ZX-02 in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*J-ARK (J, Tomoro)
*R-GUN Powered (Viletta)
*Dygenguar (Sanger)
*Huckebein Mk-III Trombe (Ratsel)
*Vegalion (Slay)

|-
| colspan="4" class="fc-std-sc" |'''第１３話：もう一度、自らの足で Scenario 13 - Once Again, On Your Feet'''

|-
| colspan="4" |'''Victory Condition:''' ZX-06 is defeated '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Clear the map in 6 turns; Defeat all other enemies before ZX-06 '''Secret Requirements:''' '''Unit Acquisition:'''
*Evangelion Unit 0 Custom (Rei)
*Evangelion Unit 1 (Shinji)
*Evangelion Unit 2 (Asuka)

|-
| colspan="4" class="fc-std-sc" |'''第１４話：オペレーション・ハルパー Scenario 14 - Operation Harper'''

|-
| colspan="4" |'''Victory Condition:''' Reduce Hermoz Ehad's HP to below 120000HP (E) / 90000HP (N) / 80000HP (H) '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Achieve the victory condition in 7 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*HyoRyu (HyoRyu)
*EnRyu (EnRyu)

|-
| colspan="4" class="fc-std-sc" |'''第１５話：遥かなる凱歌 Scenario 15 - A Faroff Victory Song'''

|-
| colspan="4" |'''Victory Condition:''' Defeat the Combine Primeval '''Defeat Condition:''' Ally Battleship is defeated, J is defeated '''Skill Point:''' Defeat all enemies in 7 turns, leaving the combined Primeval for last '''Secret Requirements:''' '''Unit Acquisition:'''
*J-Ark (J, Tomoro)
*ALL units are unavailable until clearing Scenario 18

|-
| colspan="4" class="fc-std-sc" |'''第１６話：導かれる魂、銀河で Scenario 16 - Souls Guided by the Galaxy'''

|-
| colspan="4" |'''Victory Condition:'''
*1st Part: Defeat all enemies
*2nd Part: Defeat all enemies
'''Defeat Condition:'''
*1st Part: Ideon is defeated
*2nd Part: Any ally is defeated
'''Skill Point:''' Defeat all enemies in 4 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Ideon (Cosmo, Kasha, Bess → Moera)
*VF-17S Nightmare (Kinryu)
*VF-17D Nightmare (Gamlin)
*VF-17D Nightmare (Docker)
*Battle 7 (Max, Exedore, Miho, Sally)
*Soloship (Bess)

|-
| colspan="4" class="fc-std-sc" |'''第１７話：ディスコード・ハーモニー Scenario 17 - Discord / Harmony'''

|-
| colspan="4" |'''Victory Condition:''' (1)(2) Defeat the Zig Mac; (3) Defeat FZ-109F Elgarthorn '''Defeat Condition:''' (1) Any ally is defeated; (2) Any ally is defeated, Zig Mac moves next to the Soloship (3) '''Skill Point:''' Meet victory the condition in 4 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Battle 7 can now transform into "Enhanced Attack Mode"
*VF-17D Nightmare (Docker)

|-
| colspan="4" class="fc-std-sc" |'''第１８話：銀河流浪 Scenario 18 - Galactic Wandering'''

|-
| colspan="4" |'''Victory Condition:'''
*1st Part: Defeat FZ-109F Elgarthorn
*2nd Part: Defeat Zig Mac
'''Defeat Condition:'''
*1st Part: Any ally is defeated
*2nd Part: Any ally is defeated
'''Skill Point:''' Meet victory conditions in 3 turns '''Secret Requirements:'''
*Duel Gundam
**Take the Earth Route
*VF-1J S Valkyrie
**Take the Earth Route
*LaGOWE
**Take the Earth Route
'''Unit Acquisition:'''
*VF-17D Nightmare (Physica)
*VF-17S (Kinryu), VF-17D (Gamlin), and VF-17D (Physica) gain the "Diamond Force Attack" combination Attack
*Ideon gains the "Omnidirectional Missile" attack
*All Ideon and Macross 7 units are lost <ul><li>Ideon (Cosmo, Kasha, Moera)</li><li>Soloship (Bess)</li><li>Battle 7 (Max, Exedore, Miho, Sally)</li><li>VF-17S Nightmare (Kinryu)</li><li>VF-17D Nightmare (Physica)</li><li>VF-17D Nightmare (Gamlin)</li>

|}
 

==Stages 19 - 33==
{| width="100%"
|- class="fc-route-h"
| width="50%" |'''Descend to Earth''' Gundam 0083 Gundam Z ZZ Gundam Char's CounterAttack Gundam Wing Gundam SEED Macross 7 Macross Plus Evangelion
| width="50%" |'''Mount a Lunar offensive''' GaoGaiGar Ideon Mazinger (Z, Great) Getter Robo Steel Jeeg Combattler V Gaiking Raideen Dancouga GoShogun

|-
| class="fc-route1" |'''第１９話：宇宙に降る星 Scenario 19 - Stars Falling in Space'''
| class="fc-route3" |'''第１９話：悪夢への招待状 Scenario 19 - A Written Invitation to a Nightmare'''

|-
|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated, Kira is defeated '''Skill Point:''' Destroy all enemies in 6 turns '''Secret Requirements:'''
*Duel Gundam
**Destroy Yzak.
'''Unit Acquisition:'''
*Nu Gundam (Amuro)
*Jegan (Katz)
*MP Nu Gundam (Kayra)
*Incom and Fin Funnel parts for MP Nu Gundam
*Kira unlocks the SEED pilot skill
*Skygrasper
*Ra Cailum (Bright, Torres)

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Destroy the Muge battleship in 6 turns (retreats at 6000HP (E) / 8000HP (N) / 10000 HP (H)) '''Secret Requirements:''' 
'''Unit Acquisition:'''
*Daiku Maryu (Pete, Midori)
*Gaiking (Sanshiro)
*Skylar (Fan Li)
*Bazolar (Yamagatake)
*Nesser (Bunta)

|-
| class="fc-route1" |'''第２０話：強襲、砂漠の虎 Scenario 20 - Assault of the Desert Tiger'''
| class="fc-route3" |'''第２０話：異邦人達の帰還 Scenario 20 - The Foreigners Return'''

|-
|'''Victory Condition:''' Defeat the Lesseps '''Defeat Condition:''' Ally battleship is defeated, Kira is defeated '''Skill Point:''' Defeat the Lesseps in 6 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Kira unlocks the SEED pilot skill
*Albion (Synapse, Paserov)
*Gundam Stamen (Kou)
*GM Cannon II (Keith)
*GM Custom (Burning)
*GM Custom (Bate)
*GM Custom (Monsha)
*GM Cannon II (Adel)
*Gundam GP01fb
*Armed Base Orchis parts for Gundam Stamen

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Destroy Helmut's Muge battleship in 4 turns (retreats at 6000HP (E) / 8000HP (N) / 10000 HP(H)) '''Secret Requirements:''' '''Unit Acquisition:'''
*Ideon (Cosmo, Kasha, Moera)
*Ideon gains the "Ideon Sword" and "Ideon Sword (MAP)" attacks
*Soloship (Bess, Hatari)

|-
| class="fc-route1" |'''第２１話：プリティ・デビル Scenario 21 - Pretty Devil'''
| class="fc-route3" |'''第２１話：裏切りの代償 Scenario 21 - The Cost of Betrayal'''

|-
|'''Victory Condition:'''
*1st Part: Gigil's ship is defeated
*2nd Part: Gigil's ship is defeated 
'''Defeat Condition:'''
*1st Part: Any ally is defeated
*2nd Part: Basara is defeated
'''Skill Point:''' Destroy Gigil before he moves adjacent to Sivil '''Secret Requirements:'''
*LaGOWE
**Waltfeld and Dacosta must both survive and get a combined total of 10 kills or more on the first half of the scenario.
*VF-1J
**Milia must get a total of 10 kills in the first half of the scenario.
'''Unit Acquisition:'''
*VF-17S Nightmare (Kinryu)
*VF-17D Nightmare (Gamlin)
*VF-17D Nightmare (Physica)
*VF-1J S Valkyrie (Milia)
*LaGOWE (Waldfelt)
*BuCUE (Dacosta)
*Skygrasper (Cagalli)
*VF-19 Kai Fire Valkyrie (Basara)
*VF-17S Nighmare (Milia)
*VF-1J S Valkyrie

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Any ally is defeated '''Skill Point:''' Destroy all enemies in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Goshogun (Shingo, Killy, Remi)
*Good Thunder (Sabranth)

|-
| class="fc-route1" |'''第２２話：砂塵の果て Scenario 22 - Beyond the Clouds of Sand'''
| class="fc-route3" |'''第２２話：発動する力、無限大 Scenario 22 - Infinite Activation Power'''

|-
|'''Victory Condition:''' (1) Defeat the Lesseps; (2) Waltfeld is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated '''Skill Point:''' Defeat the Lesseps in 5 turns '''Secret Requirements:'''
*LaGOWE
**Kira must destroy Waltfeld's LaGOWE while in SEED. (Kira has to activate SEED mode before the event that ends the stage.)
'''Unit Acquisition:'''
*Kira unlocks the SEED pilot skill

|'''Victory Condition:''' (1) Soloship reaches the computer facility; (2) Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Get the Soloship to the indicated area in 4 turns without it taking any damage '''Secret Requirements:''' '''Unit Acquisition:'''
*HyoRyu (HyoRyu)
*EnRyu (EnRyu)

|-
| class="fc-route1" |'''第２３話：エモーション・ハイ Scenario 23 - Emotion High'''
| class="fc-route3" |'''第２３話：決戦！地獄の月荒野 Scenario 23 - Decisive Battle in the Hellish Lunar Wilderness!'''

|-
|'''Victory Condition:''' (1) Defeat 2 Ghosts; (2) Defeat all enemies; (3) Basara sings to Sivil, All ZAFT forces are defeated '''Defeat Condition:''' (1) Ally battleship is defeated, Battle 7 is defeated; (2) Ally battleship is defeated, Battle 7 is defeated, Isamu or Guld are defeated; (3) Ally battleship is defeated, Isamu, Guld, or Basara are defeated '''Skill Point:''' Clear the map in 9 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*YF-19's "Full Volley" attacks gains +200 Attack power
*YF-19 and YF-21 gain the "Double Pinpoint Barrier Punch" combination attack
*Battle 7 (Max, Exedore, Miho, Sally)
*VF-19 Kai Fire Valkyrie (Basara)
*Mazinkaiser
*Shin Getter Robo

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Clear the map in 9 turns '''Secret Requirements:''' '''Unit Acquisition:'''

|-
| colspan="2" class="fc-std-sc" |'''第２４話：戦神の星で Scenario 24 - On the Planet of the War God'''

|-
| colspan="2" |'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' (1) Any ally is defeated; (2) Ally battleship is defeated '''Skill Point:''' Destroy all enemies in 3 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*VF-19 Kai Fire Valkyrie (Basara)
*VF-11 MAXL Kai (Mylene)
*VF-17 Kai Nightmare (Ray, Veffidas)
*Tallgeese III (Zechs)
*Taurus (Noin)
*Voltes V (Kenichi, Ippei, Daijiroh, Hiyoshi, Megumi)
*Daimos (Kazuya)
*Garuba FX-II (Kyoshiro, Nana)

|-
| colspan="2" class="fc-std-sc" |'''第２５話：選ばれし者、選びし者 Scenario 25 - Those Who Are Chosen, Those Who Choose'''

|-
| colspan="2" |'''Victory Condition:''' (1) Hermos is defeated; (2) Zifrud is defeated '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Clear the map in 8 turns '''Secret Requirements:''' '''Unit Acquisition:'''

|-
| colspan="2" class="fc-std-sc" |'''第２６話：かりそめの旅人 Scenario 26 - Transitory Traveler'''

|-
| colspan="2" |'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated, Temjin, Fei Yen, or Apharmd are defeated '''Skill Point:''' Destroy all enemies in 3 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Temjin 747J (Chief)
*Fei Yen the Knight (Fei)
*Apharmd The Hatter (The Hatter)

|-
| colspan="2" class="fc-std-sc" |'''第２７話：勇気ある者達の誓い Scenario 27 - The Oath of the Courageous'''

|-
| colspan="2" |'''Victory Condition:'''
*1st Part: Defeat all enemies
*2nd Part: (1) Defeat all enemies; (2) Defeat the Z-Master within (10 (E) / 7 (N) / 5 (H)) turns 
'''Defeat Condition:'''
*1st Part: Ally battleship is defeated, Gai is defeated
*2nd Part: (1) Ally battleship is defeated, Gai or J are defeated; (2) (10 (E) / 7 (N) / 5 (H)) turns have passed, Ally battleship is defeated, Gai or J are defeated 
'''Skill Point:''' Destroy all enemies in 7 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*J-Ark (J, Tomoro)

|-
| colspan="2" class="fc-std-sc" |'''第２８話：いつか星の海へ Scenario 28 - Someday, In the Sea of Stars'''

|-
| colspan="2" |'''Victory Condition:''' (1)(2) Defeat the Zonder Robo; (3) Defeat the Zonder Robo within 6 attacks from Star GaoGaiGar; (4)(5) Defeat all enemies '''Defeat Condition:''' (1) Galeon is defeated; (2) Ally battleship is defeated, Galeon is defeated; (3) Ally battleship or Gai are defeated, Zonder Robo is not defeated within 6 attacks from Star GaoGaiGar (4) Main Character is defeated; (5) Ally battleship is defeated '''Skill Point:''' Destroy the Zonuder Robo in 5 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Galeon (Galeon)
*Star GaoGaiGar/GaoGaiGar (Gai)
*YF-19 (Isamu)
*YF-21 (Guld)
*Battle 7 (Max)
*VF-17S Nightmare (Milia)
*VF-17D Nightmare (Gamlin)
*VF-17D Nightmare (Physica)
*VF-19 Kai Fire Valkyrie (Basara)
*VF-11 MAXL Kai (Mylene)
*VF-17 Kai Nightmare (Ray, Veffidas)
*HyoRyu (HyoRyu)
*EnRyu (EnRyu)
*Goldymarg (Goldymarg)
*Volfogg (Volfogg)
*Mic Sounders XIII (Mic Sounder XIII)
*Ideon (Cosmo, Kasha, Moera)
*Soloship (Bess, Hatari)
*Star GaoGaiGar (Guy, Choryujin, Goldymarg, Mic, Volfogg)
*Dygenguar (Sanger)
*Aussenseiter (Ratsel)
*R-Blade Custom (Ryusei)
*R-Gun Powered (Viletta)

|-
| colspan="2" class="fc-std-sc" |'''第２９話：押された烙印 Scenario 29 - Branded with the Mark'''

|-
| colspan="2" |'''Victory Condition:''' (1)(2) Defeat all enemies '''Defeat Condition:''' (1) Ally battleship is defeated; (2) Ally battleship is defeated, Cagalli is defeated '''Skill Point:''' Destroy all enemies in 6 turns '''Secret Requirements:'''
*Destroid Monster
**Take the Space Route
*FBz-99G
**Take the Space Route
*Strike Rouge IWSP
**Cagalli must have 30 or more kills by the end of this stage.
***Take the Alaska Route
*Duel Gundam
**Take the Alaska Route
'''Unit Acquisition:'''
*GaoFighGar (Guy)
*HyoRyu (HyoRyu)
*EnRyu (EnRyu)
*Goldymarg (Goldymarg)
*Volfogg (Volfogg)/Big Volfogg (Big Volfogg)
*Mic Sounders XIII (Mic Sounders XIII)
*AnRyu (AnRyu)
*KouRyu (KouRyu)
*Ra Cailum (Bright, Torres)

|- class="fc-route-h"
|'''Head to Alaska''' Gundam (0083, Z, ZZ, CCA, Wing, SEED) Daitarn 3 Mazinger (Z, Great) Steel Jeeg Voltes V Daimos Dancouga Evangelion
|'''Go to Space''' GaoGaiGar Ideon Getter Robo Combattler V GaiKing Raideen Goshogun Macross (DYRL, 7, Plus) Virtual On

|-
| class="fc-route2" |'''第３０話：終わらない閃光 Scenario 30 - Unending Flashes of Light'''
| class="fc-route4" |'''第３０話：ロスト・ディーヴァ Scenario 30 - Lost Diva'''

|-
|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated, Kira is defeated '''Skill Point:''' Clear the map in 7 turns '''Secret Requirements:'''
*Strike Rouge IWSP
**Mwu must defeat Dearka
**After the event, Kira must defeat Athrun while both are in SEED.
'''Unit Acquisition:'''
*Skygrasper (Cagalli)
*Strike Gundam (Kira)
*Kira unlocks the SEED pilot skill
*Cagalli unlocks the SEED pilot skill (needs verification)
*Archangel loses Natarle as a subpilot

|'''Victory Condition:''' (1)(2) Defeat all enemies '''Defeat Condition:''' (1) Any ally is defeated: (2) Ally battleship is defeated, Fire Bomber, Diamond Force, or Skull Squadron are defeated '''Skill Point:''' In 6 turns, destroy Glavil and Gavil. You must destroy Glavil before Gavil '''Secret Requirements:'''
*Gavil and FBz-99G Zaubergeran
**Gamlin must defeat Gavil
'''Unit Acquisition:'''
*YF-19 (Isamu) (Before Deploying)
*YF-21 (Guld) (Before Deploying)
*VF-1S S Valkyrie (Focker)
*VF-1S S Valkyrie (Hikaru)
*VF-1A S Valkyrie (Kakizaki)
*VF-17D Nightmare (Gamlin)
*VF-17D Nightmare (Physica)
*VF-19 Kai Fire Valkyrie (Basara)
*VF-11 MAXL Kai (Mylene)
*VF-17 Kai Nightmare (Ray, Veffidas)

|-
| class="fc-route2" |'''第３１話：青き清浄なる世界のために Scenario 31 - For Our Blue & Pure World'''
| class="fc-route4" |'''第３１話：禁断の惑星へ Scenario 31 - To the Forbidden Planet'''

|-
|'''Victory Condition:''' (1) Defeat all enemies; (2)(3) Defeat all Mobile Dolls, All ZAFT Units retreat '''Defeat Condition:''' (1)(2) Ally battleship is defeated, Heero is defeated; (3) Ally battleship is defeated '''Skill Point:''' Do not let a single ZAFT machine get shot down '''Secret Requirements:'''
*Duel Gundam
**Yzak must survive the scenario.
'''Unit Acquisition:'''
*Archangel gains Newman as a subpilot
*Freedom Gundam (Kira)
*Daitarn 3 (Banjo)
*Black Wing (Alan)

|'''Victory Condition:'''
*1st Part: Defeat all enemies
*2nd Part: Defeat Gepelnitch
'''Defeat Condition:'''
*1st Part: Any ally is defeated
*2nd Part: Ally battleship is defeated, Basara or Gamlin are defeated
'''Skill Point:''' In 7 turns, destroy Glavil and Gavil and make Gepelnitch's ship retreat (at 50,000 HP) '''Secret Requirements:'''
*Destroid Monster
**Get the Skill Point on this stage.
*Gavil and FBz-99G Zaubergeran
**Gamlin must defeat Gavil 
'''Unit Acquisition:'''
*Destroid Monster

|-
| class="fc-route2" |'''第３２話：守護神の巫女 Scenario 32 - Priestess of the Guardian God'''
| class="fc-route4" |'''第３２話：インフィニティ・ソウル Scenario 32 - Infinity Soul'''

|-
|'''Victory Condition:''' (1)(2) Defeat all enemies '''Defeat Condition:''' Any Ally is defeated; Ally battleship is defeated, Sanger or Rastel are defeated '''Skill Point:''' In 5 turns, destroy the General of Hell or Flora. '''Secret Requirements:''' '''Unit Acquisition:'''
*Dygenguar (Sanger)
*Assenseiter (Ratsel)

|'''Victory Condition:''' (1) Valgo is defeated; (2)(3) Defeat all enemies '''Defeat Condition:''' (1) Mylene, Ray, or Gamlin are defeated; (2) Basara, Mylene, Ray, or Gamlin are defeated; (3) Ideon is defeated '''Skill Point:''' In 6 turns, destroy Valgo '''Secret Requirements:'''
*Gavil and FBz-99G Zaubergeran
**Gamlin must defeat Gavil 
'''Unit Acquisition:'''
*VF-17D Nightmare → VF-17S Nightmare (Gamlin)
*VF-17D Nightmare (Docker)
**VF-17S (Gamlin), VF-17D (Physica) and VF-17D (Docker) gain the "Diamond Force Attack" combination attack
*VF-19 Kai Fire Valkyrie, VF-11 MAXL Kai, and VF-17 Kai Nightmare gain the "Sound Booster" mech ability
**All VF-19 Kai Fire Valkyrie SB Songs gain (MAP) and (ALL) combination attack variants when Sound Booster activates.
**All VF-11 MAXL Kai SB Songs gain (MAP) and (ALL) combination attack variants when Sound Booster activates.
*Ideon (Cosmo, Kasha, Moera)
** Ideon gains the "Ideon Sword" and "Ideon Sword (MAP)" attacks when IDE gauge is full, and HP is below 30%
*Soloship (Bess, Hatari)

|-
| class="fc-route2" |'''第３３話：暁への脱出 Scenario 33 - Escape to Daybreak'''
| class="fc-route4" |'''第３３話：受け継ぎし遺産 Scenario 33 - The Successor's Inheritance'''

|-
|'''Victory Condition:''' (1)(2) Defeat all enemies besides the Albion (3) Reach the 9th turn '''Defeat Condition:''' (1) Ally battleship is defeated, Kira, Shinobu, or Alan are defeated, Albion is defeated; (2) Kira, Shinobu, Alan, Mwu, or Cagalli are defeated '''Skill Point:''' In 8 turns, destroy all enemies except the Albion '''Secret Requirements:''' '''Unit Acquisition:'''
*Strike Gundam (Mwu)
*Strike Rouge (Cagailli)
*M1 Astray (Juri)
*M1 Astray (Mayura)
*M1 Astray (Asagi)
*Justice Gundam (Athrun)
*Buster Gundam (Dearka)
*Mazinger Z gains the "Giant Swing Rocket Punch" attack
*Great Mazinger gains the "Great Booster" attack
*Koutetsu Jeeg stats are enhanced and can transform into Jeeg Panzeroid
*Dancouga and Black Wing can combine into Final Dancouga.

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated, Akira or Jinguji are defeated '''Skill Point:''' In 8 turns, destroy Etzira, Valgo, Glavil, Gabro Zan, and Gije '''Secret Requirements:''' '''Unit Acquisition:'''
*VF-1A S Valkyrie (Kakizaki)
*Raideen gains the Mutron Open mech ability
*Ideon (Cosmo, Kasha, Moera)
*Soloship (Bess, Hatari)
*Battle 7 (Max, Exedore, Miho, Sally)
*VF-1S S Valkyrie (Fokker)
*VF-1S S Valkyrie (Hikaru)
*VF-1A S Valkyrie (Kakizaki)
*YF-19 (Isamu)
*YF-21 (Guld)
*VF-19 Kai Fire Valkyrie (Basara)
*VF-11 MAXL Kai (Mylene)
*VF-17 Kai Nightmare (Ray, Veffidas)
*VF-17S Nightmare (Gamlin)
*VF-17D Nightmare (Physica)
*VF-17D Nightmare (Docker)

|}
 

==Stages 34 - 44==
{| width="100%"
|- class="fc-route-h"
| width="25%" |'''Touma Route'''
| width="25%" |'''Kusuha Route'''
| width="25%" |'''Cobray Route'''
| width="25%" |'''Selena Route'''

|-
| class="fc-route1" |'''第３４話：武人の心、その意味 Scenario 34 - Why a Warrior Fights'''
| class="fc-route2" |'''第３４話：怒りの強念者 Scenario 34 - The Wrath of a Esper'''
| class="fc-route3" |'''第３４話：虚ろな魂の捕囚 Scenario 34 - Captivity of the Hollow Soul'''
| class="fc-route4" |'''第３４話：ベトレイヤー Scenario 34 - Betrayer'''

|-
|'''Victory Condition:'''
*1st Part: (1)(2) Defeat all enemies
*2nd Part: Bemidoban is defeated 
'''Defeat Condition:'''
*1st Part: (1) Ally battleship is defeated; (2) Ally battleship is defeated, Touma is defeated
*2nd Part: Touma is defeated
'''Skill Point:''' Defeat all enemies within 6 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Raioh (Touma)
*Mazinger Z, Great Mazinger and Getter Dragon gain the "F Dynamic Special" combination attack

|'''Victory Condition:'''(1)(2) Shin RyuOhKi is defeated; (3)(4) Bemidoban and Shmuel are defeated '''Defeat Condition:''' (1) Any ally is defeated; (2) Kusuha is defeated; (3) Kusuha is defeated, Ally battleship is defeated; (4) Ally battleship is defeated '''Skill Point:''' Destroy the Bemidoban (retreats (8000 (E) / 10000 (N) / 12000 (H)) HP) '''Secret Requirements:''' '''Unit Acquisition:'''
*Mazinger Z, Great Mazinger and Getter Dragon gain the "F Dynamic Special" combination attack
*Dygenguar (Sanger)
*Aussenseiter (Ratsel)

|'''Victory Condition:''' Shin RyuOhKi is defeated '''Defeat Condition:''' Ally battleship is defeated, Cobray, Arad, or Seolla are defeated '''Skill Point:''' Defeat Shin RyuOuKi within 6 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Werkbau (Cobray)
*Mazinger Z, Great Mazinger and Getter Dragon gain the "F Dynamic Special" combination attack

|'''Victory Condition:''' (1) Shmuel is defeated; (2)(3) Bemidoban defeated Shin RyuOhKi '''Defeat Condition:''' (1) Selena is defeated; (2) Ally battleship is defeated, Selena is defeated; (3) Ally battleship is defeated '''Skill Point:''' Bemidoban and Shin RyuOuKi shot down. Both flee when below (8000 (E) / 10000 (N) / 12000 (H)) HP. '''Secret Requirements:''' '''Unit Acquisition:'''
*Mazinger Z, Great Mazinger and Getter Dragon gain the "F Dynamic Special" combination attack
*Alterion (CF) (Ibis, Tsugumi)
*AS Soleares (Selena, Elma) is unavailable during the intermission

|-
| class="fc-route1" |'''第３５話：闘志、誰がために Scenario 35 - For Whom the Fighting Spirit Burns'''
| class="fc-route2" |'''第３５話：魂、久遠に Scenario 35 - The Soul, Into Eternity'''
| class="fc-route3" |'''第３５話：THE GUN OF DIS Scenario 35 - THE GUN OF DIS'''
| class="fc-route4" |'''第３５話：クロージング・ハート Scenario 35 - Closing Heart'''

|-
|'''Victory Condition:''' (1)(2) Defeat all enemies '''Defeat Condition:''' (1) Touma is defeated; (2) Ally battleship is defeated, Touma, Sanger, or Rastel are defeated '''Skill Point:''' Defeat all enemies within 4 turns of allied reinforcements arriving. '''Secret Requirements:''' '''Unit Acquisition:'''
*DaiRaioh(Touma)
*Dygenguar (Sanger)
*Aussenseiter (Ratsel)

|'''Victory Condition:''' (1)(2)(3) Shin RyuOhKi is defeated '''Defeat Condition:''' (1) Kusuha or Bullet are defeated; (2) Kusuha is defeated; (3) Ally battleship is defeated, Kusuha is defeated '''Skill Point:''' Destroy Shin RyuOhKi within 6 turns of Varuch Ben and Ishar's arrival, destroying them first. '''Secret Requirements:''' '''Unit Acquisition:'''
*GouRyu Kai (Kusuha)
*Raiko Kai (Bullet)
*Shin RyuKoOh (Kusuha, Bullet)
*Dygenguar (Sanger)
*Aussenseiter (Ratsel)

|'''Victory Condition:''' (1)(2) Bemidoban or Shmuel are defeated; (3) ??? is defeated; (4) Valk Baal is defeated '''Defeat Condition:''' (1) Cobray is defeated, (2)(3)(4) Ally battleship is defeated, Cobray is defeated '''Skill Point:''' Defeat the Bemidoban within 5 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Varuch Ben (Cobray)
*Dis Astranagant (Cobray)

|'''Victory Condition:''' (1)(2) Defeat all enemies '''Defeat Condition:''' (1) Selena is defeated; (2) Ally battleship is defeated '''Skill Point:''' Map cleared within 7 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Eslim (Selena)
*Alterion (CF) replaces Tsugumi with Slay as a Subpilot

|-
| colspan="4" class="fc-std-sc" |'''第３６話：激突！勇者VS勇者！ Scenario 36 - Clash! Brave vs. Brave!'''

|-
| colspan="4" |'''Victory Condition:'''
*1st Part: Defeat all enemies
*2nd Part: Ally battleship is defeated
'''Defeat Condition:'''
*1st Part: Star GaoGaiGar is defeated
*2nd Part: Gai is defeated
'''Skill Point:''' Defeat all enemies within 6 turns. '''Secret Requirements:'''
*EVA-01 F-Type Equipment
**Shinji must defeat Ramiel on the first part of this scenario.
*Early Nu Gundam HWS
**Amuro must have 60 or more kills by the end of the scenario.
*GP-02A
**Burning, Monsha, Bate, and Adel must have a combined killcount of 100 or more by the end of the scenario.
*Nuclear Bazooka
**Meet the requirements for GP-02A
*Black Getter
**Michiru must have 20 kills or more by the end of the scenario.
'''Unit Acquisition:'''
*Gundam GP02
*Megarider
*Re-GZ BWS
*MP Nu Gundam
*Black Getter
*VF-1S S Valkyrie (Fokker)
*VF-1S S Valkyrie (Hikaru)
*VF-1A S Valkyrie (Kakizaki)
*VF-1J S Valkyrie
*YF-19 (Isamu)
*YF-21 (Guld)
*Battle 7 (Max)
*VF-19 Kai Fire Valkyrie (Basara)
*VF-11 MAXL Kai (Mylene)
*VF-17 Kai Nightmare (Ray)
*VF-17S Nightmare (Gamlin)
*VF-17D Nightmare (Physica)
*VF-17D Nightmare (Docker
*Soloship (Bess, Hatari)
*Ideon (Cosmo, Kasha, Moera)

|-
| colspan="4" class="fc-std-sc" |'''第３７話：果て無き旅路の始まり Scenario 37 - The Beginning of an Unending Journey'''

|-
| colspan="4" |'''Victory Condition:''' (1) Defeat all enemies; (2)(3) Devariim is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated; (3) Ally battleship is defeated, Bundle, Cutnall, or Kernagul are defeated
'''Skill Point:''' All enemies destroyed within 6 turns, with Devariim being last. '''Secret Requirements:''' '''Unit Acquisition:'''
*Heavy Weapons System parts for Nu Gundam
*Evangelion Unit 0 Custom gains the "N2 Mine" MAP attack
*Evangelion Unit 1 gains the "Magoroku E Sword" attack
*Gunbuster (Noriko)
*Sizzler Black (Jung)
*Eltrium (Tashiro, Deputy Chief)
*Bundle Ship (Bundle)
*Cutnall Ship (Cutnall)
*Kernagul Ship (Kernagul)

|- class="fc-route-h"
| colspan="2" |'''Go with the Soloship''' Gundam (0083, Zeta, ZZ, CCA, Wing, SEED) Getter Robo Raideen Daitarn 3 Evangelion Ideon GaoGaiGar
| colspan="2" |'''Go with the Battle 7''' Mazinger (Z, Great) Macross (DYRL, 7, Plus) Steel Jeeg Combattler V Voltes V Gunbuster Daimos Gaiking Goshogun Dancouga Virtual On

|-
| colspan="2" class="fc-route1" |'''第３８話：運命の炎の中で Scenario 38 - Within the Fires of Destiny'''
| colspan="2" class="fc-route3" |'''第３８話：戦火は星の瞬きと Scenario 38 - The Fires of War Among the Twinkling Stars'''

|-
| colspan="2" |'''Victory Condition:'''
*1st Part: Enemy Battleship is defeated
*2nd Part: (1) Defeat all enemies; (2) Dalam's Ship is defeated
'''Defeat Condition:'''
*1st Part: Ally battleship is defeated, Ideon is defeated
*2nd Part: (1) Ally battleship is defeated; (2) Ally battleship is defeated, Cosmo is defeated
'''Skill Point:''' Clear the map within 7 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Ideon loses Moera as a subpilot
*Ideon gains the "Ideon Gun" attack

| colspan="2" |'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Defeat all enemies within 6 turns. '''Secret Requirements:''' '''Unit Acquisition:'''

|-
| colspan="2" class="fc-route1" |'''第３９話：果てに待つもの Scenario 39 - What Awaits at the End'''
| colspan="2" class="fc-route3" |'''第３９話：ただ母星のために Scenario 39 - All for the Motherworld'''

|-
| colspan="2" |'''Victory Condition:''' (1)(2)Gabro Zan is defeated '''Defeat Condition:''' (1) Ally battleship is defeated, Ryouma, Hayato, Benkei, or Michiru are defeated; (2) Ally battleship is defeated, Ryouma, Hayato, Benkei, or Cosmo are defeated '''Skill Point:''' Destroy all Buff Clan ships within 8 turns, saving Gabro Zan for last. '''Secret Requirements:''' '''Unit Acquisition:'''
* Ideon gains Gije as a subpilot
* Shin Getter-1 gains the "Shin Shine Spark" attack

| colspan="2" |'''Victory Condition:''' Heinel is defeated '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Within 7 turns, defeat all enemies, then defeat Heinel and Richter (Richter must be defeated before Heinel) '''Secret Requirements:''' '''Unit Acquisition:'''

*Goshogun gains the "GoFlasher Special" attack

|-
| colspan="2" class="fc-route1" |'''第４０話：勇者王、最後の刻！ Scenario 40 - The King of Brave’s Final Hour!'''
| colspan="2" class="fc-route3" |'''第４０話：勇気、果つる時… Scenario 40 - When Courage Fails...'''

|-
| colspan="2" |'''Victory Condition:'''
*1st Part: Defeat all enemies
*2nd Part: Ally battleship is defeated
'''Defeat Condition:'''
*1st Part: Defeat all enemies
*2nd Part: Gai is defeated
'''Skill Point:''' Defeat all enemies within 6 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*All GaoGaiGar units are lost

| colspan="2" |'''Victory Condition:''' (1)(2)(3) Defeat all enemies '''Defeat Condition:''' (1) Gai is defeated; (2) Ally battleship is defeated, Gai is defeated; (3) Ally battleship is defeated '''Skill Point:''' Defeat all enemies within 7 turns, with Palparepa Plus being the last one. '''Secret Requirements:''' '''Unit Acquisition:'''
*GaoFighGar (Gai)
*All GaoGaiGar units are lost

|-
| colspan="4" class="fc-std-sc" |'''第４１話：銀河が消滅する日 Scenario 41 - The Day the Galaxy is Extinguished'''

|-
| colspan="4" |'''Victory Condition:''' (1) Defeat all enemies; (2) GaoFighGar is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated, J is defeated '''Skill Point:''' GaoFighGar shot down by turn 7. '''Secret Requirements:'''
*Gije & Ganga Rube
**When given the option, choose to meet the opponent's challenge (first option).
'''Unit Acquisition:'''
*J-Ark (J, Tomoro)
|-
| colspan="4" class="fc-std-sc" |'''第４２話：超勇者黙示録 Scenario 42 - The Super Brave Apocalypse'''

|-
| colspan="4" |'''Victory Condition:'''
*1st Part: Defeat all enemies
*2nd Part: Genesis GaoGaiGar reaches the designated point in 4 turns
'''Defeat Condition:'''
*1st Part: Gai or J are defeated
*2nd Part: Ally battleship is defeated, Gai is defeated, 5th turn is reached
'''Skill Point:''' All enemies shot down by turn 7. '''Secret Requirements:'''
* J-Phoenix & Renais (Sub Pilot)
**Have J defeat Pia Decem on the first part of the stage. Defeat Pia Decem again to gain the attack.
'''Unit Acquisition:'''
* King J-der gains the "J-Phoenix" attack, and gains Renais as a sub-pilot
**Koryuu and Anryuu lose the "Renais Support Attack" attacks
*Genesic GaoGaiGar (Gai)
*J-Ark (J, Tomoro)
** Renais also is a sub-pilot if the conditions are met in the first part of the stage
*Goldymarg (Goldymarg)
*Big Volfogg (Volfogg)
*TenRyuJin (TenRyuJin)
*KoRyu (KoRyu)
*AnRyu (AnRyu)
*EnRyu (EnRyu)
*HyoRyu (HyoRyu)
*Mic Sounder XIII (Mic Sounder XIII)

|- class="fc-route-h"
|'''Touma Route'''
|'''Kusuha Route'''
|'''Cobray Route'''
|'''Selena Route'''

|-
| class="fc-route1" |'''第４３話：閉ざされた世界で Scenario 43 - In a Closed-Off World'''
| class="fc-route2" |'''第４３話：真の龍神 Scenario 43 - The True Dragon God'''
| class="fc-route3" |'''第４３話：人形たちの宴 Scenario 43 - The Doll’s Banquet'''
| class="fc-route4" |'''第４３話：サイレント・クライ Scenario 43 - Silent Cry'''

|-
|'''Victory Condition:'''
*1st Part: (1) Defeat all enemies; (2) Vaikran is defeated, Houle is defeated
*2nd Part: Baran is defeated
'''Defeat Condition:'''
*1st Part: (1) Ally battleship is defeated, Touma or Ryusei are defeated; (2) Ally battleship is defeated, Ryusei is defeated
*2nd Part: Touma is defeated
'''Skill Point:''' Defeat the Bemidoban within 5 turns. '''Secret Requirements:''' '''Unit Acquisition:'''

|'''Victory Condition:''' (1) Defeat Shin RyuOhKi; (2) Vaikran is defeated, Houle is defeated '''Defeat Condition:''' (1) Kusuha or Ryusei are defeated; (2) Ally battleship is defeated, Ryusei is defeated '''Skill Point:''' Defeat Shin RyuOhKi within 5 turns. '''Secret Requirements:''' '''Unit Acquisition:'''

|'''Victory Condition:'''
*1st Part: (1) Defeat all enemies; (2) Vaikran is defeated, Houle is defeated
*2nd Part: Valk Baal is defeated
'''Defeat Condition:'''
*1st Part: (1)(2) Ally battleship is defeated, Ryusei is defeated
*2nd Part: Cobray is defeated
'''Skill Point:''' Defeat the Bemidoban within 5 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Dis Astranagant (Cobray) is unavailable during the intermission

|'''Victory Condition:''' (1) Defeat all enemies; (2)(3) Vaikran is defeated, Houle is defeated'''Defeat Condition:''' (1)(2) Ally battleship is defeated, Selena, Ibis, or Ryusei are defeated (3) Ryusei is defeated'''Skill Point:''' Defeat the Bemidoban within 5 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*AS Alegrias (Selena, Elma?) Is unavailable until the next stage

|-
| class="fc-route1" |'''第４４話：闘志、未来のために Scenario 44 - Fighting Spirit, for the Future'''
| class="fc-route2" |'''第４４話：四神招魂、ここに Scenario 44 - The Four Gods Souls, Gather Here'''
| class="fc-route3" |'''第４４話：鋼の戦神 Scenario 44 - The Steel War God'''
| class="fc-route4" |'''第４４話：マイホーム・マイフレンズ Scenario 44 - My Home, My Friends'''

|-
|'''Victory Condition:'''
*1st Part: Vaikran is defeated
*2nd Part: (1)(2) Vaikran is defeated
'''Defeat Condition:'''
*1st Part: Ally battleship is defeated, Ryusei is defeated
*2nd Part: (1) Touma or Lyria are defeated; (2) Touma, Baran, or Lyria are defeated
'''Skill Point:''' Destroy the Vaikran within 5 turns. '''Secret Requirements:'''
*VF-19F Excaliburs
**Max must have a total of 60 or more kills by the end of the scenario, if you do not pick the Go to Varauta route.
*Gije & Ganga Rube
**You must pick the Go To Bozoan Route.
'''Unit Acquisition:'''
* DaiRaioh gains the "Jinrai" attack 
*Banpreios (Ryuusei, Rai, Mai)
*Dygenguar (Sanger)
*Aussenseiter (Ratsel)
*Shumel (Lyria)
*Bemidoban (Baran)

|'''Victory Condition:'''
*1st Part: Vaikran is defeated
*2nd Part: (1)(2) Vaikran is defeated
'''Defeat Condition:'''
*1st Part: Kusuha or Ryusei are defeated
*2nd Part: (1) Ally battleship is defeated, Kusuha is defeated; (2) Kusuha, Bullet, or Lyria are defeated
'''Skill Point:''' Destroy the Vaikran within 5 turns. '''Secret Requirements:'''
*VF-19F Excaliburs
**Max must have a total of 60 or more kills by the end of the scenario, if you do not pick the Go to Varauta route.
*Gije & Ganga Rube
**You must pick the Go To Bozoan Route.
'''Unit Acquisition:'''
*Banpreios (Ryuusei, Rai, Mai)
*Dygenguar (Sanger)
*Aussenseiter (Ratsel)
*Shumel (Lyria)
*Shin RyuKoOh can now transform into Shin KoRyuOh

|'''Victory Condition:'''
*1st Part: (1) Defeat all enemies; (2) Vaikran is defeated
*2nd Part: Defeat all enemies
'''Defeat Condition:'''
*1st Part: (1)(2) Ally battleship is defeated, Ryusei, Arad or Seola are defeated
*2nd Part: Ally battleship is defeated, Cobray or Lyria are defeated
'''Skill Point:''' Destroy the Vaikran within 3 turns of its arrival. '''Secret Requirements:'''
*VF-19F Excaliburs
**Max must have a total of 60 or more kills by the end of the scenario, if you do not pick the Go to Varauta route.
*Gije & Ganga Rube
**You must pick the Go To Bozoan Route.
'''Unit Acquisition:'''
*Dis Astranagant (Cobray)
*Banpreios (Ryuusei, Rai, Mai)
*Dygenguar (Sanger)
*Aussenseiter (Ratsel)
*Shumel (Lyria)

|'''Victory Condition:'''
*1st Part: (1) Valk Isher is defeated; (2) Vaikran is defeated
*2nd Part: (1)(2) Vaikran is defeated
'''Defeat Condition:'''
*1st Part: (1)(2) Ally battleship is defeated, Ryusei or Ibis are defeated
*2nd Part: (1) Ally battleship is defeated, Selena, Ibis, or Lyria are defeated; (2) Selena or Lyria are defeated
'''Skill Point:''' Destroy the Vaikran within 3 turns of its arrival. '''Secret Requirements:'''
*VF-19F Excaliburs
**Max must have a total of 60 or more kills by the end of the scenario, if you do not pick the Go to Varauta route.
*Gije & Ganga Rube
**You must pick the Go To Bozoan Route.
'''Unit Acquisition:'''
*Banpreios (Ryuusei, Rai, Mai)
*Dygenguar (Sanger)
*Aussenseiter (Ratsel)
*Shumel (Lyria)
*Alterion (CF) replaces Slay with Tsugumi as a subpilot
*Vegalion (Slay)
**Alterion (CF) and Vegalion can combine into Hyperion

|}
 

==Stages 45 - 48==
{| width="100%"
|- class="fc-route-h"
| colspan="2" |'''Go to Earth'''
| colspan="2" |'''Go to Space'''

|- class="fc-route-h"
| width="25%" |'''Search for Irui''' Mazinger (Z, Great) Getter Robo Kotetsu Jeeg Gaiking Dancouga
| width="25%" |'''Fight against ZAFT''' Gundam (0083, Z, ZZ, CCA) Gundam Wing Gundam SEED Evangelion
| width="25%" |'''Go to Varauta''' Macross (DYRL, 7, Plus) GoShogun Daitarn 3 Gunbuster
| width="25%" |'''Go to Boazan''' Ideon Combattler V Voltes V Daimos Raideen GaoGaiGar Virtual On

|-
| class="fc-route1" |'''第４５話：とらわれの心、叫ぶ時 Scenario 45 - When the Captive Heart Cries Out'''
| class="fc-route2" |'''第４５話：忍び寄る終焉 Scenario 45 - Creeping Death'''
| class="fc-route3" |'''第４５話：悪夢の突入作戦 Scenario 45 - Charging into a Nightmare'''
| class="fc-route4" |'''第４５話：もう一つの母星ボアザン Scenario 45 - Another Mother Planet - Boazan'''

|-
|'''Victory Condition:''' (1) Defeat all enemies: (2) Legion is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated '''Skill Point:''' Defeat all enemies within 7 turns '''Secret Requirements:'''
'''Unit Acquisition:'''

|'''Victory Condition:''' (1) Defeat all enemies; (2) All Angels are defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated, Shinji, Asuka, or Rei are defeated '''Skill Point:''' Defeat all enemies within 5 turns. '''Secret Requirements:'''
*Early Nu Gundam HWS
**If you did not receive it on Scenario 37, Amuro must have 60 or more kills by the end of the scenario.
*EVA-01 F-Type Equipment(optional)
**Shinji must defeat Armisael.
*Neue Ziel
**Kou must have 40 or more kills than Keith by the end of the scenario.
*Val Varo
**Keith must have 20 or more kills than Kou by the end of the scenario.
*Gerbera Tetra
**Kou and Keith's killcounts must be within 6 of one another by the end of the scenario.
*Quin Mantha
**The sum of Ple and Ple 2's killcounts must be a number ending in 5 at the end of the scenario.
*Haman's Qubeley
**The sum of Ple and Ple 2's killcounts must be a number ending in 0 at the end of the scenario.
*MP Qubeleys
**The sum of Ple and Ple 2's killcounts must be a number ending in 7 at the end of the scenario.
*Doven Wolf
**The sum of Beecha and Mondo's killcounts must be a number ending in 0 at the end of the scenario.
*Geymalk
**The sum of Beecha and Mondo's killcounts must be a number ending in 5 at the end of the scenario.
*Strike Rouge IWSP
**The sum of Cagalli, Julie, Mayura, and Asagi's killcounts must be 100 or more by the end of the scenario.
*Early Full Armor ZZ Gundam
**Judau, Mondo, Beecha, Elle, Roux, and Iino's combined killcounts must be greater than 115 by the end of this scenario.
'''Unit Acquisition:'''
*Neue Ziel OR Val Varo OR Gerbera Tetra
*Quin Mantha OR Haman's Qubeley OR Mass Production Qubeley (x2)
*Doven Wolf OR Geymalk
*Strike Rougue IWSP
*Heavy Weapon System for Nu Gundam
*Full Armor Parts for ZZ Gundam
*Evangelion Unit 2 gains the "A.T. Field" attack
*Evangelion Unit 0 Custom gains the "Lance of Longinus" attack

|'''Victory Condition:'''
*1st Part: All allies reach the designated point, aside Battle 7
*2nd Part: Any ally reaches the designated point
'''Defeat Condition:'''
*1st Part: Any ally is defeated
*2nd Part: Any ally is defeated
'''Skill Point:''' Defeat all enemies before moving a unit to the target area. '''Secret Requirements:'''
'''Unit Acquisition:'''
*The following all gain the "Large Anti-Ship Reaction Missile" attack
**VF-1S S Valkyrie (Focker), VF-1S S Valkyrie (Hikaru), VF-1A S Valkyrie (Kakizaki)
**VF-17S Nightmare (Gamlin), VF-17D Nightmare (Docker), VF-17D Nightmare (Physica)
**YF-19 (Isamu), YF-21 (Guld)

|'''Victory Condition:''' Zartan is defeated '''Defeat Condition:''' Any ally is defeated '''Skill Point:''' Destroy all other enemies before destroying Zaltan. '''Secret Requirements:'''
'''Unit Acquisition:'''
*Voltes V is unavailable during the intermission
*Daimos is unavailable during the intermission

|-
| class="fc-route1" |'''第４６話：さらば父よ、戦士達の旅立ち Scenario 46 - Farewell, Father! The Warriors Depart'''
| class="fc-route2" |'''第４６話：永遠を信じて Scenario 46 - Believe in Eternity'''
| class="fc-route3" |'''第４６話：野望の第４惑星 Scenario 46 - The Fourth Planet of Ambition'''
| class="fc-route4" |'''第４６話：崩れゆく邪悪の塔 Scenario 46 - The Collapsing Tower of Evil'''

|-
|'''Victory Condition:''' (1) Steel Jeeg persuades Flora; (2) Defeat Yamata no Orochi, Demonica, and the Dragon Ship; (3) '''Defeat Condition:''' (1) Flora is defeated, Ally battleship is defeated, Kouji, Tetsuya, or Steel Jeeg are defeated; (2) Yamata no Orochi reaches the designated point, Ally battleship is defeated, Kouji, Tetsuya or Steel Jeeg are defeated '''Skill Point:''' Destroy Ryuuma and the Grand Marshall of Hell within 8 turns. '''Secret Requirements:'''
*Minmei's Disc
**Move Boss's squad onto either 'Hut' tile on the beach, and you will pick up the item
'''Unit Acquisition:'''
*Mazinkaizer gains the "Kaizer Nova" attack and Flight (S Rank in Air)

|'''Victory Condition:''' (1)(2) Defeat all enemies; (3) The Dominion withdraws '''Defeat Condition:''' (1) Any ally is defeated; (2)(3) Ally battleship is defeated, Kira or Athrun are defeated '''Skill Point:''' Destroy the Dominion (retreats at (10000HP (E) / 15000HP (N)/20000HP (H)) '''Secret Requirements:''' '''Unit Acquisition:'''
*Eternal (Lacus, Andrew)
*BuCUE
*METEOR parts for Freedom Gundam
*METEOR parts for Justice Gundam
*LaGOWE

|'''Victory Condition:''' (1) Guide all enemies east past the designated line; (2) All allies reach the escape point '''Defeat Condition:''' (1) Any ally is defeated, Any enemy is defeated; (2) Any ally is defeated '''Skill Point:''' Clear the map by defeating all enemies within 8 turns of the victory condition change '''Secret Requirements:'''
*VF-19F Excaliburs
**Max must get 15 or more kills on this scenario.
'''Unit Acquisition:'''
*VF-22S Sturmvogel II (Max)
*FBz-99G Zaubergeran (Gamlin)
*VF-19 Kai Fire Valkyrie gains the song "TRY AGAIN"
**VF-19 Kai Fire Valkyrie, VF-11 MAXL Kai, and VF-17 Kai Nightmare gain the "TRY AGAIN" (MAP) and (ALL) combination attack

|'''Victory Condition:''' (1) None; (2) Warchimedes is defeated; (3) Janera is defeated '''Defeat Condition:''' (1) Any friendly unit is defeated, Voltes V or Daimos are defeated; (2)(3) Ally battleship is defeated, Hyouma, Ken'ichi, Kazuya, or Heinel are defeated '''Skill Point:''' Destroy all enemies and finish the stage within 10 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Combattler V, Voltes V, and Daimos gain the "Choudenji SeiKenZuki" combination attack

|-
| class="fc-route1" |'''第４７話：神になろうとした男 Scenario 47 - The Man Who Tried to Become a God'''
| class="fc-route2" |'''第４７話：ヒトの見た夢 Scenario 47 - The Dream People Saw'''
| class="fc-route3" |'''第４７話：大宇宙の意志 Scenario 47 - The Will of the Universe'''
| class="fc-route4" |'''第４７話：因果の海で Scenario 47 - In the Sea of Causality'''

|-
|'''Victory Condition:''' (1) Defeat all enemies; (2) Shapiro is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated '''Skill Point:''' Destroy Shapiro within 6 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Gaiking and Daiku Maryuu gain the "Giant Cutter Upside-down Slash" combination attack

|'''Victory Condition:''' (1)(2)(3) Defeat all enemies; '''Defeat Condition:''' (1) Ally battleship is defeated, Kira, Mwu, or Dearka are defeated; (2) Kira is defeated; (3) The Vesalius is defeated '''Skill Point:''' Orga, Clotho and Shani shot down before Fllay reaches the Dominion. '''Secret Requirements:''' '''Unit Acquisition:'''

|'''Victory Condition:''' (1)(2)(3) Defeat all enemies '''Defeat Condition:''' (1) Any ally is defeated; (2) Ally battleship is defeated, Bundle is defeated; (3) Ally battleship is defeated, Bundle, Gamlin, or Mylene are defeated '''Skill Point:''' Destroy all SMTC units within 5 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*VF-19S Excalibur (before deployment)
*VF-19F Excalibur (x2) (before deployment)
*Bundle's Ship (Bundle, Cutnal, Kernagul)

|'''Victory Condition:'''
*1st and 2nd Part: Defeat all enemies within (5 (E) / 4 (N) / 3 (H)) turns
*3rd and 4th Part: Defeat all enemies within (4 (E) / 3 (N) / 2 (H)) turns
*5th Part: Defeat all enemies within (8 (E) / 7 (N) / 6 (H)) turns
'''Defeat Condition:'''
*1st and 2nd Part: Ally battleship is defeated, Turn (6 (E) / 5 (N) / 4 (H)) is reached
*3rd and 4th Part: Ally battleship is defeated, Turn (5 (E) / 4 (N) / 3 (H)) is reached
*5th Part: Ally battleship is defeated, Turn (9 (E) / 8 (N) / 7 (H)) is reached
'''Skill Point:''' During the 5th Part: Shoot down the two Gataman Zans before the Gabro Zan '''Secret Requirements:''' '''Unit Acquisition:'''

|-
| colspan="2" class="fc-route1" |'''第４８話：失われた者たちへの鎮魂歌 Scenario 48 - Requiem for the Lost'''
| colspan="2" class="fc-route4" |'''第４８話：銀河に死す Scenario 48 - To Die in the Galaxy'''

|-
| colspan="2" |'''Victory Condition:''' (1) Deathgaia, Gildrome, and Helmut are defeated; (2) Mute Zalbados is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated '''Skill Point:''' Defeat all enemies within 6 turns after Muge Zalbados appears, then defeat Muge Zalbados '''Secret Requirements:'''
*Early Nu Gundam HWS
**If you did not receive it on Scenario 37 or 45, Amuro must have 60 or more kills by the end of the scenario.
'''Unit Acquisition:'''

| colspan="2" |'''Victory Condition:''' (1) Defeat all enemies; (2) Gollum or Zomd are defeated; (3) Defeat all enemies; (4) Gabro Zan is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated, Basara is defeated; (3)(4) Ally battleship is defeated, Ideon is defeated '''Skill Point:''' Destroy GaviGla (retreats at 8000HP (E) / 10000HP (N) / 12000HP (H)) '''Secret Requirements:'''
*Early Nu Gundam HWS
**If you did not receive it on Scenario 37 or 45, Amuro must have 60 or more kills by the end of the scenario.
*Gije & Ganga Rube
**The Ide Gauge must reach level 5 during this scenario.
'''Unit Acquisition:'''
*Ideon replaces Gije with Dek as a Subpilot
*Battle 7 gains the "Large Anti-Ship Reaction Missile" attack
*VF-19 Kai Fire Valkyrie (Basara) is unavailable during the intermission

|}
 

==Stages 49 - 58==
{| width="100%"
|-
| colspan="3" class="fc-std-sc" |'''第４９話：銀河に響く歌声 Scenario 49 - Songs Resounding Through the Galaxy'''

|-
| colspan="3" |'''Victory Condition:'''
*1st Part: Defeat all enemies, In 5 turns Battle 7 reaches the designated point
*2nd Part: (1) In 6 turns, Battle 7 reaches the designated point; (2)(3)(4) Gepelnitch is defeated
'''Defeat Condition:'''
*1st Part: Ally battleship is defeated, Battle 7 doesn't reach the designated point by turn 6
*2nd Part: (1) Ally battleship is defeated, Mylene or Ray are defeated, Battle 7 doesn't reach the designated point by turn 7; (2) Ally battleship is defeated, Ray is defeated; (3) Ally battleship is defeated, Basara, Mylene, or Ray are defeated; (4) Ally battleship is defeated, Basara, Mylene, Ray, or Sybil are defeated
'''Skill Point:''' GaviGla is defeated (in the 1st part) '''Secret Requirements:'''
*Gavil and FBz-99G Zaubergeran
**If Gamlin has over 50 kills, Gamlin must defeat GaviGla during the first half of the scenario. During the second half of the scenario, do not defeat Gavil.
'''Unit Acquisition:'''
*VF-22S Sturmvogel II (Max)
*VF-22S Sturmvogel II (Milia)
*Sybil (Sybil)
**VF-19 Kai Fire Valkyrie, VF-11 MAXL Kai, and VF-17 Kai Nightmare, and Sybil gain the "TRY AGAIN" combination attack
*FBz-99G Zaubergeran (Gavil)

|-
| colspan="3" class="fc-std-sc" |'''第５０話：二つの門と二つの星 Scenario 50 - Two Gates, Two Stars'''

|-
| colspan="3" |'''Victory Condition:''' (1) Hermodr Echad is defeated; (2) Zfield is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated '''Skill Point:''' Destroy the Hermodr Echad within 5 turns. '''Secret Requirements:'''
*Duel Gundam & Yzak
**Dearka's killcount must be 50 or more by the end of the scenario.
'''Unit Acquisition:'''

|-
| colspan="3" class="fc-std-sc" |'''第５１話：終わらない明日へ Scenario 51 - To an Unending Tomorrow'''

|-
| colspan="3" |'''Victory Condition:'''
*1st Part: (1) Destroy all nuclear missiles; (2) Dominion is defeated & Athrun reaches the designated point
*2nd Part: Destroy the Genesis reactor within 4 turns
'''Defeat Condition:'''
*1st Part: (1) Any missile reaches the end of the map, Ally battleship is defeated, Kira, Athrun or Cagalli are defeated; (2) Ally battleship is defeated, Kira, Athrun or Cagalli are defeated
*2nd Part: Kira is defeated, reach the 5th turn
'''Skill Point:''' Destroy the Providence Gundam (in the 2nd part) '''Secret Requirements:'''
*Duel Gundam & Yzak
**During the first half of the scenario, destroy all of the nukes, then have Dearka battle with Yzak
**Both must survive the first half of the scenario
'''Unit Acquisition:'''
*Cagalli and Lacus unlock the SEED pilot skill
*Duel Gundam (Yzak) (can join permanently)

|-
| colspan="3" class="fc-std-sc" |'''第５２話：世界の中心でアイを叫んだもの Scenario 52 - The One Who Cried "Love" at the Heart of the World'''

|-
| colspan="3" |'''Victory Condition:'''
*1st Part: (1)(2)(3) Defeat all enemies (4)(5) EVA Unit 1 is defeated
*2nd Part: EVA Unit 1 is defeated
'''Defeat Condition:'''
*1st Part: (1) Any ally is defeated; (2) Shinji is defeated; (3)(4) Ally battleship is defeated; (5) Ally battleship is defeated, Reach the 6th turn after the "Cross" grows from the Earth
*2nd Part: Shinji is defeated
'''Skill Point:''' Asuka survives for 2 full turns. '''Secret Requirements:'''
*Neue Ziel
**Kou must have 40 or more kills than Keith by the end of the scenario.
*Val Varo
**Keith must have 20 or more kills than Kou by the end of the scenario.
*Gerbera Tetra
**Kou and Keith's killcounts must be within 6 of one another by the end of the scenario.
*Quin Mantha
**The sum of Ple and Ple 2's killcounts must be a number ending in 5 at the end of the scenario.
*Haman's Qubeley
**The sum of Ple and Ple 2's killcounts must be a number ending in 0 at the end of the scenario.
*MP Qubeleys
**The sum of Ple and Ple 2's killcounts must be a number ending in 7 at the end of the scenario.
*Doven Wolf
**The sum of Beecha and Mondo's killcounts must be a number ending in 0 at the end of the scenario.
*Geymalk
**The sum of Beecha and Mondo's killcounts must be a number ending in 5 at the end of the scenario.
*EVA-01 F-Type Equipment
**Shinji must defeat Zeruel on the first part of this scenario.
**Shinji must defeat EVA-01 on the second part of this scenario.
**The sum of Shinji, Asuka, and Rei's killcounts must be 250 or more, or 150 or more if you met the requirement on scenario 45.
*Hi-Nu Gundam
**Amuro and Bright's combined killcounts must be greater than 120 by the end of this scenario.
*Sazabi
**Amuro and Kamille's killcount must be 50 or more each at the end of this scenario. You will receive it at the start of next scenario.
*Strike Rouge IWSP
**If you did not receive it on Scenario 45, the sum of Cagalli, Julie, Mayura, and Asagi's killcounts must be 100 or more by the end of the scenario.
*Destroid Monster
**If you did not receive it on Scenario 31, the sum of Fokker, Hikaru, and Kakizaki's killcounts must be 100 or more by the end of this scenario.
'''Unit Acquisition:'''
*Evangelion Unit 0 (Kaowru)
*Evangelion Unit 0 loses the "Lance of Longinus" attack

|-
| colspan="3" class="fc-prologue" |'''Beyond this point, losing Ideon results in a Game Over'''
|-
| colspan="3" class="fc-std-sc" |'''第５３話：出航！銀河殴り込み艦隊！ Scenario 53 - The Galactic Assault Fleet Takes Sail!'''

|-
| colspan="3" |'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' 230 enemy units shot down by turn 7. '''Secret Requirements:''' '''Unit Acquisition:'''
*All secret units and parts are given after the stage begins <ul><li>Neue Ziel OR Val Varo OR Gerbera Tetra</li><li>Quin Mantha OR Haman's Qubeley OR Mass Production Qubeley (x2)</li><li>Doven Wolf OR Geymalk</li><li>Strike Rougue IWSP</li><li>Hi-Nu Gundam</li><li>Sazabi</li><li>Destroid Monster</li><li>F-Type Equipment for Evangelion Unit 1</li><li>Atomic Bazooka parts for GP-02</li><li>Heavy Weapon System for Nu Gundam</li></ul>
* Full Armor modular parts for Gundam ZZ
** If the secret requirements were not met earlier
*MP Nu Gundam
**Fin Funnel parts for MP Nu Gundam
*Gunbuster adds Kazumi as a Subpilot
**Gunbuster gains the "Super Inazuma Kick" attack
*Ra Cailum gains the "Nuclear Missile" MAP and ALL attacks

|-
| colspan="3" class="fc-std-sc" |'''第５４話：神に守られし星 Scenario 54 - The Planet Guarded by the Gods'''

|-
| colspan="3" |'''Victory Condition:'''
*1st Part: (1) Defeat all enemies; (2) The SRX Team rescues [https://akurasu.net/wiki/Super_Robot_Wars/Alpha_3/Info_Dump#Finding_Aya_on_Scenario_54 Aya]; (3) Jumora is defeated
*2nd Part: Bemidoban is defeated
'''Defeat Condition:'''
*1st Part: (1)(2) Ally battleship is defeated, Ryusei or Viletta are defeated; (3) Ally battleship is defeated, Ryusei, Viletta, Baran, or Lyria are defeated
*2nd Part: Sanger is defeated
**2nd Part (Touma Route): Touma is defeated
'''Skill Point:''' Clear the map within 10 turns, with both Hermoz defeated '''Secret Requirements:''' '''Unit Acquisition:'''
*Banpreios adds Aya as a Subpilot
**Branpreios gains the "Tenjou Tenge Nendou Musou-ken" attack
**Branpreios and R-GUN Powered gain the "Tenjou Tenge Ichigeki Hissatsu-ho" combination attack
*Shumel (Lyria)
*Bemidoban (Baran)

|-
| colspan="3" class="fc-std-sc" |'''第５５話：まつろわぬ神 Scenario 55 - The God Who Resists Order'''

|-
| colspan="3" |'''Victory Condition:'''
*1st Part: (1) Defeat all enemies; (2) Defeat Gebel GanEden
*2nd Part: (1) Defeat all enemies; (2) Defeat Gebel GanEden
'''Defeat Condition:'''
*1st Part: (1)(2) Ally battleship is defeated
*2nd Part: (1)(2) Ally battleship is defeated
'''Skill Point:''' Within 6 turns, defeat both Zfiruds '''Secret Requirements:''' '''Unit Acquisition:'''

|-
| colspan="3" class="fc-std-sc" |'''第５６話：終わりなき総力戦 Scenario 56 - Unending Total War'''

|-
| colspan="3" |'''Victory Condition:'''
*1st Part: Drowa Zan is defeated within 5 turns
*2nd Part: (1) Soloship move next to the Bairal Jinn; (2) Any unit reaches the designated point
'''Defeat Condition:'''
*1st Part: Ally battleship is defeated, 6th turn is reached
*2nd Part: (1)(2) Ally battleship is defeated
'''Skill Point:''' Clear the map within 7 turns. '''Secret Requirements:'''
*Gije & Ganga Rube
**You must pick the Fight The Buff Clan option at the end of the scenario.
*Bad Ending Route
**On New Game+, choose to fight (first option)
'''Unit Acquisition:'''

|- class="fc-route-h"
| width="40%" |'''Fight The Buff Clan''' Ideon, Getter Robo Combattler V, Voltes V, Daimos Daitarn 3 Gundam (0083, Zeta, ZZ, CCA, Wing, SEED)
| width="40%" |'''Fight The STMC''' Mazinger (Z, Great), Steel Jeeg, Raiden Goshogun, Dancouga, Gaiking Macross (DYRL, Plus, 7) Gunbuster, Evangelion, GaoGaiGar Virtual On
| width="20%" |'''Bad Ending '''

|-
| class="fc-route1" |'''第５７話：憎しみの環の中で Scenario 57 - In a Circle of Hatred'''
| class="fc-route3" |'''第５７話：終わりの始まり Scenario 57 - The Beginning of the End'''
| class="fc-prologue" |'''イデ発動ルート最終話：銀河に君と''' '''Ide Activation Final Scenario - With You In The Galaxy'''

|-
|'''Victory Condition:'''
*1st Part: (1) Defeat all enemies; (2) Soloship reaches the designated point
*2nd Part: Defeat all enemies within (11 (E) / 9 (N) / 7 (H)) turns
'''Defeat Condition:'''
*1st Part: (1)(2) All allies are defeated
*2nd Part: Turn (12 (E) / 10 (N) / 8 (H)) is reached, Ally battleship is defeated
'''Skill Point:''' Defeat all enemies within (10 (E) / 8 (N) / 6 (H)) turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Ganga Rube (Gije)

|'''Victory Condition:''' (1)(2) Defeat all enemies '''Defeat Condition:''' (1) Eltrium is defeated; (2) Ally battleship is defeated '''Skill Point:''' Defeat all enemies within 7 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Eltrium (Tashiro, Deputy Chief)

| rowspan="4" |'''Victory Condition:''' Bairal Jinn is defeated '''Defeat Condition:''' Ally battleship is defeated '''Secret Requirements:''' '''Unit Acquisition:'''

|-
| class="fc-route1" |'''第５８話：発動 Scenario 58 - Activation'''
| class="fc-route3" |'''第５８話：死闘、未来を懸けて Scenario 58 - The Mortal Struggle for the Future'''

|-
|'''Victory Condition:'''
*1st Part: Bairal Jinn is defeated
*2nd Part: Bairal Jinn is defeated
'''Defeat Condition:'''
*1st Part: Ally battleship is defeated
*2nd Part: Ally battleship is defeated
'''Skill Point:''' Destroy the Bairal Jinn within six turns. '''Secret Requirements:''' '''Unit Acquisition:'''

|'''Victory Condition:''' (1)(2) Defeat all enemies '''Defeat Condition:''' (1) Ally battleship is defeated; Drowa Zan is defeated, Ally battleship is defeated(2) '''Skill Point:''' All Buff Clan units survive the stage. '''Secret Requirements:''' '''Unit Acquisition:'''

|}
 

==Stages 59 - END==
{| width="100%"
|-
| colspan="2" class="fc-std-sc" |'''第５９話：果てしなき流れの果てに Scenario 59 - At the End of the Unending Flow'''

|-
| colspan="2" |'''Victory Condition:'''
*1st Part: Reach the 11th turn
*2nd Part: Defeat all enemies, 6th turn is reached
'''Defeat Condition:'''
*1st Part: Ally battleship is defeated, Any enemy enters the designated area
*2nd Part: Any enemy enters the designated area, Ally battleship is defeated, Noriko or Jung are defeated
'''Skill Point:''' Defeat all enemies within 5 turns. '''Secret Requirements:''' '''Unit Acquisition:'''

|- class="fc-route-h"
| width="50%" |'''Normal Ending - 56 Skill Points or less, OR turn count 421 or more'''
| width="50%" |'''Good Ending - 57 Skill Points or more AND turn count 420 or less'''

|-
| class="fc-route1" |'''最終話: 終焉の銀河 Final Scenario - A Galaxy of Death'''
| class="fc-route3" |'''最終話: 今遥か遠い彼方… Final Scenario - Now, The Faraway Yonder'''

|-
|'''Victory Condition:''' (1) ??? is destroyed; (2) Kaiser Ephres is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated '''Secret Requirements:''' '''Unit Acquisition:'''

|'''Victory Condition:''' (1) ??? is destroyed; (2)(3) Kaiser Ephres is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated; (3) Irui is defeated '''Secret Requirements:''' '''Unit Acquisition:'''
*Nashim Gan Eden (Irui)

|}

Super Robot Wars/Z2.2/Flow Chart

2023-07-03T18:47:11Z

KomodoWork: /* Prologue - Stage 20 */ Just a unit name

Those in Black join your team. 
Those in Orange are available for that stage, then leave. 
Those in Blue have special requirements. Check the [[../Secrets|Secrets]] page for more details. 
Those in Red previously joined, but from this point, are rendered unusable. Those lost permanently are marked so, while others rejoin later on. 
Those in Green are upgrades for units already in your party.

==Prologue - Stage 20==
{| width="100%"
|-
| colspan="4" class="fc-prologue" |'''第１話：ブラックリベリオン Prologue Scenario 1: Black Rebellion'''

|-
| colspan="4" |'''Victory Condition:''' Defeat Cornelia's Gloucester, or survive for 4 turns. '''Defeat Condition:''' Zero or Kallen are defeated. '''Secret Requirements:'''
*Zero Points:
**Shoot down Cornelia with Zero. (+1)
'''Unit Acquisition:'''
*Gawain (Zero, C.C.)
*Guren Mk.II (Kallen)
*Gekka (Tohdoh)
*Burai (Tamaki)

|-
| colspan="4" class="fc-prologue" |'''第２話：ガンダム殲滅指令 Prologue Scenario 2: Gundam Destruction Order'''

|-
| colspan="4" |'''Victory Condition:''' '''Part 1:''' Defeat all enemies, or survive for 4 turns. '''Part 2:''' Defeat all enemies, or survive for 4 turns. '''Defeat Condition:''' '''Part 1:''' Setsuna is defeated. '''Part 2:''' Heero is defeated. '''Secret Requirements:''' '''Unit Acquisition:''' 
'''First Half:'''
*Gundam Exia (Setsuna)
*Gundam Kyrios (Allelujah)
*Gundam Nadleeh (Tieria)
'''Second Half:'''
*Wing Gundam (Heero)
*Gundam Deathscythe (Duo)
*Gundam Heavyarms (Trowa)
*Gundam Sandrock (Quatre)
*Shenlong Gundam (Wufei)

|-
| colspan="4" class="fc-prologue" |'''第3話：世界最後の日 Prologue Scenario 3: The Last Day of the Earth'''

|-
| colspan="4" |'''Victory Condition:''' Defeat all enemies. Defeat Shin Dragon, or survive for 4 turns. '''Defeat Condition:''' Dai-Gurren or Shin Getter is defeated. '''Secret Requirements:''' '''Unit Acquisition:'''
*Dai-Gurren (Dayakka, Lee Long, Nia)
*Gurren Lagann (Simon, Rossiu)
*Shin Getter (Ryoma, Hayato, Musashi)
*Yoko M Tank (Yoko)
*King Kittan (Kittan)

|-
| colspan="4" class="fc-std-sc" |'''第１話：ファイティング・ガール Scenario 1: Fighting Girl'''

|-
| colspan="4" |'''Victory Condition:''' Defeat all enemies. '''Defeat Condition:''' Any ally is defeated '''SR Point:''' Defeat the second Dimensional Beast while Brasta Es has full HP. '''Secret Requirements:''' '''Unit Acquisition:'''
*Brasta Es (Esther)
*Gundam Deathscythe (Duo)
*Gundam Sandrock (Quatre)

|-
| colspan="4" class="fc-std-sc" |'''第２話：逃亡者 Scenario 2: Escapee'''

|-
| colspan="4" |'''Victory Condition:''' Defeat all enemies. '''Defeat Condition:''' Any ally is defeated '''SR Point:''' Destroy the Genocidron (Retreats at 6000 HP). '''Secret Requirements:''' '''Unit Acquisition:'''
*Guren Mk.II A-1 Arm Equipment (Kallen)
*Burai (C.C.)

|-
| colspan="4" class="fc-std-sc" |'''第3話：太陽の使者・鉄人28号 Scenario 3: Messenger of the Sun, Tetsujin 28'''

|-
| colspan="4" |'''Victory Condition:''' Defeat all enemies. '''Defeat Condition:''' Any ally is defeated '''SR Point:''' Within 5 turns, defeat all enemies, saving the Branch Robo #1 piloted by Branch for last (it retreats when below 5000 HP). '''Secret Requirements:'''
*Danube α1 (1/3)
**Choose the See Kallen Off and Crusher Squad routes.
*Zero Points:
**Up to 2 Zero Points are exclusive to the Go With Kallen and Kummen routes.
**On a first playthrough, if the See Kallen Off route is chosen, you must earn '''all''' remaining Zero Points to complete this secret.
'''Unit Acquisition:'''
*Tetsujin 28 (Shotaro)
*VF-25F Messiah (Alto)
*RVF-25 Messiah (Luca)
*VF-27y Lucifer (Brera)

|- class="fc-route-h"
| colspan="2" width="50%" |'''「カレン達を見送る」 See Kallen Off'''
| colspan="2" width="50%" |'''「カレン達と一緒に行く」 Go With Kallen'''

|- class="fc-route-h"
| width="25%" |'''「地球でクラッシャー隊に参加する」 Join the Crusher Squad on Earth''' Tetsujin 28 ''Recruit:'' Zambot 3 Trider G-7 Dai-Guard Gundam X Overman King Gainer Shin Mazinger Z
| width="25%" |'''「宇宙でS.M.S.に参加する」 Join the S.M.S. in space''' Macross Frontier ''Recruit:'' Aquarion Godmars Baldios
| width="25%" |'''「ガンダムと中東へ行く」 Go with the Gundams to the Middle East''' Gundam Wing ''Recruit:'' Gundam 00 Zeta Gundam Gundam Seed Destiny
| width="25%" |'''「黒の騎士団とクメンヘ行く」 Go with the Order of the Black Knights to Kummen''' Code Geass ''Recruit:'' VOTOMS

|-
| class="fc-route1" |'''第４話：竹尾ゼネラルカンパニー奮戦記 Scenario 4: Embattled Takeo General Company'''
| class="fc-route5" |'''第４話：セカンド・カミング Scenario 4: Second Coming'''
| class="fc-route6" |'''第４話：迷える戦士達 Scenario 4: Bewildered Soldiers'''
| class="fc-route2" |'''第４話：アッセンブルEX-10 Scenario 4: Assemble EX-10'''

|-
|'''Victory Condition:''' Defeat all enemies. '''Defeat Condition:''' All allies are defeated. '''SR Point:''' Clear the stage within 5 turns; Watta, Kappei, Shotaro, Kakikouji and Esther must each shoot down 2 enemies. '''Secret Requirements:''' '''Unit Acquisition:'''
*Zambot 3 (Kappei, Uchuta, Keiko)
*Trider G7 (Watta)
**Zambot 3 and Trider G7's ammo-based attacks have only 2 ammo each in this map
*Shuttle (Kakikouji, Atsui, Tohachiro, Ikue)
*Gundam DX (Garrod)
*King Gainer (Gainer)
*Panther (Sara, Adette)

|'''Victory Condition:''' Defeat all enemies. '''Defeat Condition:''' Any ally is defeated. Mothership is defeated. '''SR Point:''' Alto, Luca and Esther must each shoot down 2 enemies, and all initial enemies must be defeated within 3 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Macross Quarter (Jeffrey, Bobby, Cathy)
*VF-25S Messiah (Ozma)
*VF-25G Messiah (Mikhail)
*Solar, Mars and Lunar Aquarion (Apollo, Pierre, Reika)
**Silvia, Sirius, Jun and Tsugumi become available subpilots after the stage
*Queadluun-Rhea (Klan)
*VB-6 Koenig Monster (Canaria)

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Heero or Trowa are defeated. Setsuna is defeated '''SR Point:''' Defeat Barrack Zinin's Ahead (Retreats when below 6000 HP). '''Secret Requirements:''' '''Unit Acquisition:'''
*Gundam Heavyarms (Trowa)
*Leo (Heero)
*Gundam Exia Repair (Setsuna)

|'''Victory Condition:''' Defeat all enemies. '''Defeat Condition:''' All allies are defeated. '''SR Point:''' Clear the stage within 4 player turns; each ally must score at least two kills. '''Secret Requirements:''' '''Unit Acquisition:'''
*Marshdog (Chirico)
*Diving Beetle (Kan Yu)
*Diving Beetle (Potaria)
*Diving Beetle (Kiderra)
*Berserga (Ru Shako)

|-
| class="fc-route1" |'''第５話：- 広報2課の憂鬱 Scenario 5: The Melancholy of Public Relations Division 2'''
| class="fc-route5" |'''第５話：トゥインクル・スタ Scenario 5: Twinkle Star'''
| class="fc-route6" |'''第５話： OZとアロウズ Scenario 5: OZ and A-laws'''
| class="fc-route2" |'''第５話：渦中 Scenario 5: Maelstrom'''

|-
|'''Victory Condition:''' Defeat all enemies. '''Defeat Condition:''' Akagi is defeated. '''SR Point:''' Defeat both of the DM Beast Bull Damon (Special Type) simultaneously. Using a Support Attack or MAP Attack to defeat them counts as one attack. '''Secret Requirements:''' '''Unit Acquisition:'''
*Dai Guard (Akagi, Ibuki, Aoyama)
*Dai Guard gains the "Dai Guard MAX" attack

|'''Victory Condition:''' Defeat all enemies. '''Defeat Condition:''' Setsuna is defeated. '''SR Point:''' Clear the stage by Turn 4. '''Secret Requirements:''' '''Unit Acquisition:'''
*Gundam Exia Repair (Setsuna)

|'''Victory Condition:''' Have Wufei reach the designated points within five turns. '''Defeat Condition:''' Wufei is defeated, or 5 turns pass. '''SR Point:''' Defeat all enemies, then fulfill the Victory Condition. '''Secret Requirements:''' '''Unit Acquisition:'''
*Shenlong Gundam (Wufei)

|'''Victory Condition:''' Defeat all enemies. Defeat the Blue Snapping Turtle or force it to retreat. '''Defeat Condition:''' Any ally is defeated. Chirico or Potaria is defeated. '''SR Point:''' Defeat the Blue Snapping Turtle (Retreats when below 5000 HP). '''Secret Requirements:''' '''Unit Acquisition:'''

|-
| class="fc-route1" |'''第6話：登場！　ドイツの鬼伯爵！ Scenario 6: Enter! The Diabolic German Count!'''
| class="fc-route5" |'''第6話：忍び寄る脅威 Scenario 6: Creeping Threat'''
| class="fc-route6" |'''第6話：彷徨う天使達 Scenario 6: Wandering Angels'''
| class="fc-route2" |'''第6話：介入 Scenario 6: Intervention'''

|-
|'''Victory Condition:''' Defeat all enemies. '''Defeat Condition:''' All allies are defeated. Setsuna is defeated. '''SR Point:''' Defeat all initial enemies within 4 turns (on Hard difficulty, 3 turns). '''Secret Requirements:''' '''Unit Acquisition:'''
*Mazinger Z (Koji)
*Venus A (Sayaka)
*Gundam Exia Repair (Setsuna)

|'''Victory Condition:''' Defeat all enemies. '''Defeat Condition:''' Mothership is defeated. '''SR Point:''' Defeat Guldar (Geru). (Retreats when below 8000 HP) '''Secret Requirements:''' '''Unit Acquisition:'''
*Gaia / God Mars (Takeru)
*Cosmo Crusher (Kenji, Naoto, Akira, Mika)
*All Valkyrie units gain the Special Pack parts

|'''Victory Condition:''' Defeat the Ahead. All three Katharon Tieren reach the designated point. '''Defeat Condition:''' All allies are defeated. Any Katharon Tieren is defeated. '''SR Point:''' Defeat all GN-XIIIs, then defeat the Ahead before the last Katharon Tieren reaches the designated points. (You have 5 Turns) '''Secret Requirements:''' '''Unit Acquisition:'''
*Seravee Gundam (Tieria)

|'''Victory Condition:''' Blue Snapping Turtle (Ypsilon) is defeated. Defeat all enemies. '''Defeat Condition:''' Chirico, Kan Yu or Kallen is defeated. Setsuna is defeated. '''SR Point:''' Within 4 turns, defeat all other enemies before defeating the Blue Snapping Turtle. '''Secret Requirements:''' '''Unit Acquisition:'''
*Gundam Exia Repair (Setsuna)
*Diving Beetle (Kan Yu) - upgrades refunded after scenario 7

|-
| class="fc-route1" |'''第7話：対決!悲しみの青きドナウ! Scenario 7: Showdown! The Sorrowful Blue Danube!'''
| class="fc-route5" |'''第7話：次元歪曲宙域 Scenario 7: Twisted Dimension'''
| class="fc-route6" |'''第7話：反逆の翼 Scenario 7: Wings of Rebellion'''
| class="fc-route2" |'''第7話：暗転 Scenario 7: Blackout'''

|-
|'''Victory Condition:''' Defeat all enemies. Defeat Danube α1 '''Defeat Condition:''' Kouji is defeated. '''SR Point:''' Clear the stage without letting Danube α1 defeat any ally or enemy units. '''Secret Requirements:'''
*Danube α1 (2/3)
**Do not attack or counterattack her, and convince her with Tetsujin 28.
**During the 1-on-1 duel, defeat her with Mazinger Z.
'''Unit Acquisition:'''
*Mazinger Z loses flight and the "Scrander Cut" attack

|'''Victory Condition:''' Defeat all enemies. '''Defeat Condition:''' Mothership is defeated. '''SR Point:''' Defeat both of the DM Beast Bull Damon (Special Type) simultaneously. Using a Support Attack or MAP Attack to defeat them counts as one attack. '''Secret Requirements:''' '''Unit Acquisition:'''
*Baldios (Marin, Oliver, Raita)
*VF-25F and VG-25G gain the Tornado Pack parts
*VF-25S Messiah AP (Ozma)
*RVF-25 Messiah SP (Luca)

|'''Victory Condition:''' Defeat the Tallgeese (Zechs). '''Defeat Condition:''' All allies are defeated. Heero is defeated. '''SR Point:''' Within 4 turns, defeat all other enemies before defeating the Tallgeese. '''Secret Requirements:''' '''Unit Acquisition:'''
*Zeta Gundam (Kamille)
*Methuss (Fa)
*Wing Gundam (Heero)
*Destiny Gundam (Shinn)
*Force Impulse Gundam (Lunamaria)

|'''Victory Condition:''' Defeat all enemies. Reduce the Strike Dog (Ypsilon)'s HP to below 6000. '''Defeat Condition:''' Any ally is defeated. '''SR Point:''' Defeat the Lancelot Conquista (Suzaku). (Retreats when below 6000 HP) '''Secret Requirements:'''
*Zero Points:
**Clear the map. (+1)
'''Unit Acquisition:'''
*Brutishdog (Fyana)
*Diving Beetle (Potaria) - upgrades refunded
*Diving Beetle (Kiderra) - upgrades refunded
*Berserga (Ru Shako)
*Marshdog -> Scopedog (Chirico)
**Gains the Marshdog, Round Mover and Red Shoulder Custom option parts

|-
| colspan="2" class="fc-route1" |'''第8話：嵐の予兆 Scenario 8: Gathering Storm'''
| colspan="2" class="fc-route2" |'''第8話：ツインドライヴ Scenario 8: Twin Drive'''

|-
| colspan="2" |'''Victory Condition:''' Defeat all enemies. '''Defeat Condition:''' Mothership is defeated. Kouji is defeated. Any enemy reaches the Photon Power Lab. '''SR Point:''' Clear the stage without allowing any enemy units to reach the white line. '''Secret Requirements:''' '''Unit Acquisition:'''
*Mazinger Z regains flight and the "Scrander Cut" attack

| colspan="2" |'''Victory Condition:''' Defeat all enemies. '''Defeat Condition:''' Setsuna is defeated. All allies are defeated. '''SR Point:''' All Katharon NPCs must survive the stage. '''Secret Requirements:''' '''Unit Acquisition:'''
*Gundam Exia Repair (Setsuna)
*00 Gundam (Setsuna)

|-
| colspan="2" class="fc-route1" |'''第9話：ぼくらはみんな生きている Scenario 9: We're Not Alone'''
| colspan="2" class="fc-route2" |'''第9話：魔神が目覚める日 Scenario 9: The Day a Demon Awakens'''

|-
| colspan="2" |'''Victory Condition:''' Defeat all enemies. '''Defeat Condition:''' Mothership is defeated. '''SR Point:''' Within 3 player turns, defeat 16 enemies, then defeat Wheel. '''Secret Requirements:''' '''Unit Acquisition:'''
*Sol Gravion (Touga, Eiji, Runa, Mizuki, Eina, Leele)
*Gran Trooper (Faye)

| colspan="2" |'''Victory Condition:''' Defeat all enemies. '''Defeat Condition:''' All allies are defeated; Zero is defeated. '''SR Point:''' Have Zero defeat at least 1 enemy, and do not allow him take any damage before clearing the stage. '''Secret Requirements:''' '''Unit Acquisition:'''
*Burai (C.C.)
*Burai (Zero) - same unit and upgrades as C.C.'s

|-
| colspan="2" class="fc-route1" |'''第10話：平穏との別離 Scenario 10: A Farewell to Peace'''
| colspan="2" class="fc-route2" |'''第10話：もう一人のロックオン Scenario 10: Another Lockon'''

|-
| colspan="2" |'''Victory Condition:''' Defeat all enemies. '''Defeat Condition:''' Any ally is defeated. Mothership is defeated. Brera is defeated. Aoi is defeated. '''SR Point:''' Within 3 player turns, defeat 10 enemies. '''Secret Requirements:''' '''Unit Acquisition:'''
*VF-27y Lucifer (Brera)
*Nova Eagle (Aoi)
*Dancouga Nova (Aoi, Kurara, Sakuya, Johnny)

| colspan="2" |'''Victory Condition:''' Defeat the Hyaku Shiki (Quattro) or Tallgeese (Zechs). Defeat all enemies. '''Defeat Condition:''' All allies are defeated. Marguerite is defeated. '''SR Point:''' After Quattro and Zechs become NPCs, do not allow them to destroy more than 3 enemies each. '''Secret Requirements:''' '''Unit Acquisition:'''
*Cherudim Gundam (Lockon, Haro)
*Hyaku Shiki (Quattro) [NPC]
*Tallgeese (Zechs) [NPC]
*Pearl Nail (Marguerite) [NPC]
*Ptolemaios 2 (Sumeragi, Lasse, Feldt, Mileina)

|-
| colspan="2" class="fc-route1" |'''第11話：扉の向こうから Scenario 11: Beyond The Gate'''
| colspan="2" class="fc-route2" |'''第11話：アレルヤ奪還作戦 Scenario 11: Allelujah Rescue Operation'''

|-
| colspan="2" |'''Victory Condition:''' Defeat all enemies. '''Defeat Condition:''' Mothership is defeated. Marguerite is defeated. '''SR Point:''' Defeat all initial enemies within 2 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Pearl Nail (Marguerite) [NPC]

| colspan="2" |'''Victory Condition:''' Have Setsuna, Kallen, and Chirico reach the target area within 3 turns. Survive until turn 4. Defeat all enemies. '''Defeat Condition:''' Mothership is defeated. Setsuna, Kallen or Chirico are defeated. '''SR Point:''' Before meeting the first victory condition, defeat 20 enemies. (Defeating your 20th enemy in the same action as meeting the condition will count.) '''Secret Requirements:''' '''Unit Acquisition:'''
*Arios Gundam (Allelujah)

|-
| colspan="2" class="fc-route1" |'''第12話：悪意と嘘を越えて Scenario 12: Not Hate, Not Lies'''
| colspan="2" class="fc-route2" |'''第12話：百万のキセキ Scenario 12: One Million Miracles'''

|-
| colspan="2" |'''Victory Condition:''' Defeat all enemies. '''Defeat Condition:''' Mothership is defeated. '''SR Point:''' Defeat all initial enemies within 5 turns, and while doing so, have any one of your allies defeat 6 or more enemies. '''Secret Requirements:''' '''Unit Acquisition:'''

| colspan="2" |'''Victory Condition:''' Defeated all enemies. '''Defeat Condition:''' Kallen is defeated. Mothership is defeated. '''SR Point:''' Defeat Gino, Anya and Suzaku. (Each of them retreat when below 6000 HP) '''Secret Requirements:''' '''Unit Acquisition:'''
*Guren Mk.II A-1 Arm Equipment -> Guren Mk.II Flight (Kallen)
*Zangetsu (Tohdoh)
*Akatsuki Retainer Type (Asahina)
*Akatsuki Retainer Type (Chiba)
*Burai -> Akatsuki Retainer Type (C.C.)
*Ikaruga (Zero, Ohgi, Tamaki, Rakshata)

|-
| colspan="2" class="fc-route1" |'''第13話：時空震動、再び Scenario 13: Time-Space Distortion, Once Again'''
| colspan="2" class="fc-route2" |'''第13話：戦雲の扉 Scenario 13: Gates of War'''

|-
| colspan="2" |'''Victory Condition:''' Defeat all enemies. Defeat the Sapphiada (Wayne) or force it to retreat. '''Defeat Condition:''' Mothership is defeated. Setsuko is defeated. '''SR Point:''' Within 5 turns, defeat all other enemies, then defeat Sapphiada. It will retreat on turn 6 or when its HP falls below 5000. '''Secret Requirements:''' '''Unit Acquisition:'''
*Virgola Glory (Setsuko)

| colspan="2" |'''Victory Condition:''' Defeat all enemies. Defeat the Sapphiada (Wayne) or force it to retreat. '''Defeat Condition:''' Mothership is defeated. Setsuko is defeated. '''SR Point:''' Within 5 turns, defeat all other enemies, then defeat Sapphiada. It will retreat on turn 6 or when its HP falls below 4500. '''Secret Requirements:''' '''Unit Acquisition:'''
*Virgola Glory (Setsuko)

|-
| colspan="2" class="fc-route1" |'''第14話：動き出す世界 Scenario 14: The World Moves Again'''
| colspan="2" class="fc-route2" |'''第14話：与えられた力 Scenario 14: Power Bestowed'''

|-
| colspan="2" |'''Victory Condition:''' Defeat the Guyana Class Land Carrier (Lindt). '''Defeat Condition:''' Mothership is defeated. Allelujah is defeated. '''SR Point:''' Within 4 player turns, defeat all other enemies, then defeat the Guyana Class Land Carrier. '''Secret Requirements:''' '''Unit Acquisition:'''
*All units from the other route
*Gundam Heavyarms (Trowa)
*[[../Sub-Orders|Sub-Orders menu]] is unlocked after this stage

| colspan="2" |'''Victory Condition:''' Defeat the Guyana Class Land Carrier (Lindt). '''Defeat Condition:''' Mothership is defeated. Allelujah is defeated. '''SR Point:''' Within 4 player turns, defeat all other enemies, then defeat the Guyana Class Land Carrier. '''Secret Requirements:'''
*Zero Points:
**Clear the map. (+1)
'''Unit Acquisition:'''
*All units from the other route
*Gundam Heavyarms (Trowa)
*[[../Sub-Orders|Sub-Orders menu]] is unlocked after this stage

|-
| colspan="4" class="fc-std-sc" |'''第15話：マン・アズ・ビフォー Scenario 15: Man as Before'''

|-
| colspan="4" |'''Victory Condition:''' Defeat Marylin's Axio Burglar. Defeat all enemies. '''Defeat Condition:''' Esther is defeated. Mothership is defeated '''SR Point:''' Defeat Jeraud's Diem-Lee within 3 turns of his appearance. '''Secret Requirements:'''
*Nyan Nyan's Famous Tuna Buns
**Move Esther to the position 2 spaces right and 8 spaces up from the bottom left corner, or 1 space left and up from where the Macross Quarter sorties.
'''Unit Acquisition:'''
*Brasta (Crowe)

|-
| colspan="4" class="fc-std-sc" |'''第16話：次元の心央 Scenario 16: Heart of the Dimension'''

|-
| colspan="4" |'''Victory Condition:''' Defeat the Palace Insalaum (Ambroan), or force Seiouki The Insa (Uther) to retreat. Defeat all enemies. '''Defeat Condition:''' Mothership is defeated '''SR Point:''' Deal more than 4500 damage to Seiouki The Insa in one battle. It will retreat immediately after being attacked. '''Secret Requirements:''' '''Unit Acquisition:'''
*Virgola Glory (Setsuko)

|-
| colspan="4" class="fc-std-sc" |'''第17話：朱禁城の花嫁 Scenario 17: A Bride in the Vermilion Forbidden City'''

|-
| colspan="4" |'''Victory Condition:''' Defeat the Shen Hu (Li Xingke). Defeat the Da Longdan. '''Defeat Condition:''' Mothership is defeated. '''SR Point:''' Defeat 12 or more enemies, then defeat Shen Hu; meanwhile, prevent Wufei (as an NPC) from defeating more than 2 enemies. '''Secret Requirements:'''
*Zero Points:
**Shoot down the Da Longdan with Zero. (+1)
'''Unit Acquisition:'''
*Shinkirou (Zero)
**From now on, Ohgi will become captain of the Ikaruga when Shinkirou is deployed
*Shenlong Gundam (Wufei)
*Shen Hu (Li Xingke)

|-
| colspan="4" class="fc-std-sc" |'''第18話：アッシュフォード・ラプソディ Scenario 18: Ashford Rhapsody'''

|-
| colspan="4" |'''Victory Condition:''' Defeat all enemies. '''Defeat Condition:''' Mothership is defeated. Suzaku, Gino or Anya are defeated. '''SR Point:''' Clear the stage within 4 player turns. '''Secret Requirements:'''
*Adrenaline Ampoule
**Move Gino to the position 3 spaces up and 1 space right from the bottom left corner of the map.
'''Unit Acquisition:'''
*Lancelot Conquista (Suzaku)
*Tristan (Gino)
*Mordred (Anya)

|-
| colspan="4" class="fc-std-sc" |'''第19話：それぞれの戦場 Scenario 19: Each Other's Battlefield'''

|-
| colspan="4" |'''Victory Condition:''' Defeat all enemies. Survive for 3 turns after the Arche Gundam (Ali-Al Saachez) appears. '''Defeat Condition:''' Mothership is defeated. Heero or Zechs are defeated. '''SR Point:''' Within 3 player turns, defeat all other enemies, then defeat the Tallgeese (Zechs). '''Secret Requirements:''' '''Unit Acquisition:'''
*Tallgeese (Zechs)
*Wing Gundam (Heero)

|-
| colspan="4" class="fc-std-sc" |'''第20話：白と黒と Scenario 20: Black and White'''

|-
| colspan="4" |'''Victory Condition:''' Defeat all enemies. '''Defeat Condition:''' Roger is defeated. Any ally is defeated. Mothership is defeated. '''SR Point:''' Within 6 turns, defeat all other enemies, then defeat the Pearl Fang (Marilyn). (Retreats at 10000 HP) '''Secret Requirements:'''
*Kamina's Glasses (1/2) and Mark of the Brave (1/4)
**Choose the Dark Continent route.
*Auxiliary GN Drive (1/2)
**Choose the Space route.
'''Unit Acquisition:'''
*Berserga (Ru Shako)
*Big O (Roger, Dorothy)
*∀ Gundam (Loran)
*Emperanza (Gain)
*Dominator (Cynthia)
|} 

==Stages 21 - 31==
{| width="100%"
|- class="fc-route-h"
| width="50%" |'''「暗黒大陸へ向かう] Go to the Dark Continent''' Zambot 3 Trider G7 Tetsujin 28 VOTOMS Gundam X Turn A Gundam Shin Mazinger Z Dai-Guard The Big O Overman King Gainer Code Geass ''Recruit:'' Getter Robo Armageddon Gurren Lagann Xabungle
| width="50%" |'''「宇宙に上がる」 Go to Space''' Baldios Godmars Zeta Gundam Gundam Wing Gundam 00 Gundam Seed Destiny Dancouga Nova Macross Frontier Aquarion Gravion

|-
| class="fc-route1" |'''第21話：時の流れに Scenario 21: Flowing Time'''
| class="fc-route2" |'''第21話：伝説の歌声 Scenario 21: Legendary Voice'''

|-
|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Any ally defeated. Mothership is destroyed. All allies are destroyed '''SR Point:''' Destroy all the "Katora Leader" enemies before they escape. If they touch any part of the white line on the west side of the map, they will escape. '''Secret Requirements:''' '''Unit Acquisition:'''
*Tower (Hayato, Shikishima)
*Grapearl (Gimmy)
*Grapearl (Darry)

|'''Victory Condition:''' Defeat all enemies. '''Defeat Condition:''' Mothership is defeated. Alto or Basara are defeated. '''SR Point:''' Defeat all enemies within 3 turns, while preventing the Macross Quarter from taking any damage. '''Secret Requirements:''' '''Unit Acquisition:'''
*VF-19 Kai Valkyrie F (Basara) [NPC]

|-
| class="fc-route1" |'''第22話：出撃！！新たなる戦士たち！ Scenario 22: Sortie!! New Warriors!'''
| class="fc-route2" |'''第22話：ランカ・アタック Scenario 22: Ranka Attack'''

|-
|'''Victory Condition:''' Defeat all enemies. '''Defeat Condition:''' Mothership is defeated. Go is defeated. '''SR Point:''' Clear the stage within 4 player turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Shin Getter 1 (Go)
*Stelva (Schwartz)
*Shin Getter (Go, Kei, Gai)

|'''Victory Condition:''' Defeat all enemies. '''Defeat Condition:''' Mothership is defeated. Canaria is defeated. Basara is defeated. '''SR Point:''' Destroy 50 or more Vajra within 5 turns, while preventing Canaria from taking any damage. '''Secret Requirements:''' '''Unit Acquisition:'''
*Gundam Sandrock (Quatre)
*VF-27y Lucifer (Brera)
*VF-19 Kai Valkyrie (Basara)
**Gains Battloid form and the "MY FRIENDS" & "TRY AGAIN" songs
*VF-22S S Vogel II (Gamlin)

|-
| class="fc-route1" |'''第23話：あなたは何もわかってない Scenario 23: You Do Not Know Anything'''
| class="fc-route2" |'''第23話：悲しみのカトル Scenario 23: Grief Stricken Quatre'''

|-
|'''Victory Condition:''' Defeat all enemies. '''Defeat Condition:''' Any ally is defeated. Mothership is defeated. '''SR Point:''' Defeat all initial enemies within 3 turns. '''Secret Requirements:'''
*Kamina's Glasses (2/2)
**Move Simon to the Statue of Kamina on the map (4 spaces down and 4 left from where Simon sorties).
'''Unit Acquisition:'''
*Gurren Lagann (Simon)
*Walker Gallia (Jiron, Chill)
*Xabungle (Elche, Fatman)

|'''Victory Condition:''' Defeat the Wing Gundam Zero. '''Defeat Condition:''' Any ally is defeated. Mothership is defeated. Duo or Wufei are defeated. '''SR Point:''' Within 6 turns, defeat all other enemies, then defeat Wing Gundam Zero. '''Secret Requirements:''' '''Unit Acquisition:'''
*Strike Freedom Gundam (Kira)
*∞ Justice Gundam (Athrun)
*Gundam Deathscythe (Duo)
*Shenlong Gundam (Wufei)

|-
| class="fc-route1" |'''第24話：あなたはもう必要ないのです Scenario 24: You Are No Longer Needed'''
| class="fc-route2" |'''第24話：ゼロと呼ばれたＧ Scenario 24: The Gundam They Call Zero'''

|-
|'''Victory Condition:''' Defeat the Enkidudu (Viral). Reduce Shin Dragon's HP to below 10000. Defeat all enemies. '''Defeat Condition:''' Mothership is defeated. Simon or Go are defeated. '''SR Point:''' Within 3 turns, defeat all other enemies, then defeat Viral. (Timp, Kan Yu and Beck will retreat when they reach the south edge of the map.) '''Secret Requirements:'''
*Mark of the Brave (2/4)
**Defeat all other enemies, then have Simon defeat Viral.
'''Unit Acquisition:'''
*Shin Getter 1, 2, and 3 gain the "Shin Getter Change Attack" attack

|'''Note:''' Flying units in this map count as being in space terrain.
<hr>'''Victory Condition:''' Defeat the Wing Gundam Zero. Survive until turn 7. '''Defeat Condition:''' Setsuna is defeated. Mothership is defeated. Tieria is defeated. '''SR Point:''' Defeat 60 or more enemies within 6 turns. '''Secret Requirements:'''
*Auxiliary GN Drive (2/2)
**Move Duo 6 spaces down from the upper right corner of the map.
'''Unit Acquisition:'''
*Ptolemaios 2 gains Anew as a sub-pilot
*Gundam Deathscythe -> Gundam Deathscythe Hell (Duo)
*Gundam Sandrock -> Gundam Sandrock Custom (Quatre)
*Shenlong Gundam -> Altron Gundam (Wufei)
*Taurus (Hilde)
*Seravee Gundam gains the "Seravim Divide Attack" attack

|-
| colspan="2" class="fc-std-sc" |'''第25話：終わらない約束 Scenario 25: Neverending Promise'''

|-
| colspan="2" |'''Victory Condition:''' Defeat all enemies. '''Defeat Condition:''' Renton is defeated. Mothership is defeated. Crowe or Esther are defeated. '''SR Point:''' Within 4 turns, defeat all ADAMON units, then defeat Pearl Nail (Marguerite). It will retreat on turn 5 or when its HP falls below 10,000. '''Secret Requirements:''' '''Unit Acquisition:'''
*Nirvash spec2 (Renton, Nirvash)
*Gunleon (Rand, Mel)
*Brasta Es (Esther)

|-
| colspan="2" class="fc-std-sc" |'''第26話：冥府への転落 Scenario 26: The Fall into Netherworld'''

|-
| colspan="2" |'''Victory Condition:''' Defeat all enemies. Defeat Abdora U6. '''Defeat Condition:''' Boss is defeated. Mothership is defeated. Koji is defeated. Any Insalaum unit defeats Abdora U6. '''SR Point:''' Within 3 turns, defeat all other enemies, then defeat Abdora U6. Do not allow any Insalaum or Kedora enemies to shoot each other down. '''Secret Requirements:''' '''Unit Acquisition:'''
*Boss Borot (Boss, Nuke, Mucha)
*Brasta loses both SPIGOT-VX weapons for this map
*VF-19 Kai F Valkyrie (Basara)
*VF-22S S Vogel II (Gamlin)

|-
| colspan="2" class="fc-std-sc" |'''第27話：ゼロＶＳゼロ Scenario 27: Zero VS Zero'''

|-
| colspan="2" |'''Victory Condition:''' Defeat Wing Gundam Zero or Altron Gundam. Defeat Wing Gundam Zero. Defeat all enemies. '''Defeat Condition:''' Any ally is defeated. Mothership is defeated. '''SR Point:''' After the A-Laws units sortie, clear the stage within 4 turns of their appearance. '''Secret Requirements:'''
*Zero Points:
**Reduce Wing Gundam Zero's HP to below 60% (+2)
**Or, shoot down Wufei. (+1)
**'''Note:''' If you fulfill one Zero Point condition, you cannot fulfill the other.
'''Unit Acquisition:'''

|-
| colspan="2" class="fc-std-sc" |'''第28話：暗黒よりの使者 Scenario 28: Messenger from the Darkness'''

|-
| colspan="2" |'''Victory Condition:''' Defeat all enemies. Defeat Black Ox. Defeat Bizzarm (Gestalt). '''Defeat Condition:''' Mothership is defeated. Shotaro or Takeru are defeated. Black Ox is defeated. '''SR Point:''' Have the NPC Black Ox defeat 3 or more enemies. '''Secret Requirements:''' '''Unit Acquisition:'''
*God Sigma (Toshiya, Julie, Kiraken)
*Black Ox (Black Ox) [NPC]

|-
| colspan="2" class="fc-std-sc" |'''第29話：戦士達の叫び Scenario 29: Warriors' Cry'''

|-
| colspan="2" |'''Victory Condition:''' Defeat all enemies. '''Defeat Condition:''' Mothership is defeated. Setsuna, Kamille or Allelujah are defeated. Heero is defeated. '''SR Point:''' Clear the stage within 4 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Gundam Epyon (Heero)
*00 Gundam -> 00 Raiser (Setsuna, Saji)
*Wing Gundam -> Wing Gundam Zero (Heero)
*Taurus (Noin)
*Gundam Heavyarms -> Gundam Heavyarms Custom (Trowa)
*Allelujah gains the "Combine" special skill
*Zeta Gundam gains the "Biosensor" ability and the "Waverider Assault" attack
*Taurus (Hilde) gets a paint change and gains the "Beam Saber" attack

|-
| colspan="2" class="fc-std-sc" |'''第30話：一点突破 Scenario 30: Breakthrough Point'''

|-
| colspan="2" |'''Victory Condition:''' Gain, Lockon and Mikhail reach the designated points within 5 turns. Defeat all enemies. '''Defeat Condition:''' Mothership is defeated. Gain, Lockon or Mikhail are defeated. Reach the enemy phase of the 5th turn. Crowe is defeated. '''SR Point:''' Defeat all enemies except Rook ADAMON and fulfill the first victory condition within 3 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Orguss (Kei)
*Gunleon (Rand, Mel)

|-
| colspan="2" class="fc-std-sc" |'''第31話：ジ・アンブレイカブル Scenario 31: The Unbreakable'''

|-
| colspan="2" |'''Victory Condition:''' Deal 30,000 or more damage to Diamund (Jeraud). Defeat Diamund. '''Defeat Condition:''' Mothership is defeated. Crowe is defeated. '''SR Point:''' Defeat 20 enemies and fulfill the first victory condition within 3 turns. '''Secret Requirements:'''
*'''Note:''' Danube α1 and Anew are mutually exclusive secrets; you cannot finish both.
*Danube α1 (3/3)
**Choose the Earth route.
*Anew's survival (1/2)
**Choose the Space route.
*Super Repair Kit
**Move Crowe to the position 6 spaces up and 13 spaces right from the bottom left corner of the map.
'''Unit Acquisition:'''
*Axio Scott SP-II (Crowe)
*Brasta -> Li-Brasta R or Li-Brasta B (Crowe)
**Before the stage, choose Plan A (Melee/Super) for Li-Brasta R, or Plan B (Ranged/Real) for Li-Brasta B.
|} 

== Stages 32 - 40==
{| width="100%"
|- class="fc-route-h"
|'''「陽動部隊に参加するために地上に残る」 Stay on Earth to join the diversion team''' Zambot 3 Trider G7 Godsigma Baldios Tetsujin 28 Godmars Xabungle VOTOMS Dancouga Nova Getter Robo Armageddon Shin Mazinger Z Dai-Guard The Big O Overman King Gainer Gravion Code Geass Gurren Lagann ''Recruit:'' Dancouga
|'''「衛星兵器を破壊するために宇宙に上る」 Go to space to destroy the satellite weapon''' Orguss Zeta Gundam Gundam Wing Gundam X Turn A Gundam Gundam Seed Destiny Gundam 00 Macross Frontier Macross 7 Aquarion Eureka 7 ''Recruit:'' Char's Counterattack

|-
| class="fc-route3" |'''第32話：奪われた鉄人 Scenario 32: The Stolen Tetsujin'''
| class="fc-route4" |'''第32話：メメントモリ攻略戦 Scenario 32: Assault on Memento Mori'''

|-
|'''Victory Condition:''' Reduce Tetsujin 28's HP to below 2000. Defeat Branch Robo #5. '''Defeat Condition:''' Tetsujin 28 or Black Ox are defeated. Any ally is defeated. Mothership is defeated. '''SR Point:''' Defeat the Pearl Fang (Marilyn). It will retreat 4 turns after it appears or when its HP falls below 10000. '''Secret Requirements:''' '''Unit Acquisition:'''
*Black Ox (Black Ox)
*Kokubogar (Iizuka)
*Danube α1 (Lorelei)
*Tetsujin 28 gains the "Tetsujin Full Power" attack

|'''Victory Condition:''' Defeat Lindt's Baikal Class Cruiser and have Ptolemaios 2 reach the designated point within 5 turns. '''Defeat Condition:''' Mothership is defeated. Setsuna or Amuro are defeated. Reach 6th turn. '''SR Point:''' Before fulfilling the victory condition, defeat all enemies. '''Secret Requirements:''' '''Unit Acquisition:'''
*00 Raiser gains the "Trans-AM Raiser Sword" attack (and MAP version)
*Cherudim Gundam gains the "GN Heavy Weapon" and "Trans-AM Consecutive Fire" attacks
*Seravee Gundam gains the "GN Heavy Weapon (MAP)" attack and "Trans-AM System" gains +500 power
*Arios Gundam gains the "GN Heavy Weapon" attack
*ν Gundam (Amuro)
*Ptolemaios 2 gains the "Trans-AM" command

|-
| class="fc-route3" |'''第33話：ブラック・アヴェンジャー Scenario 33: Black Avenger'''
| class="fc-route4" |'''第33話：散りゆく光の中で Scenario 33: Scattered Light'''

|-
|'''Victory Condition:''' Defeat all enemies within 5 turns. '''Defeat Condition:''' Mothership is defeated. Reach 6th turn. '''SR Point:''' Clear the stage within 3 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Black Getter (Ryoma)

|'''Note:''' Only flight-capable units can deploy in this stage.
<hr>'''Victory Condition:''' Destroy all Solar Panels. '''Defeat Condition:''' Mothership is defeated. Allelujah or Loran are defeated. Any Solar Panel reaches the edge of the map. '''SR Point:''' Destroy 100 Solar Panels. (Any that are destroyed by enemies or NPCs don't count.) '''Secret Requirements:''' '''Unit Acquisition:'''
*Arios Gundam gains the "GN Archer Combination Attack" attack
*∀ Gundam gains the "Moonlight Butterfly" attack (and MAP version)
*Tieren All Terrain Type (Sergei) [NPC]
*Gundam Epyon (Milliardo) [NPC]
*GN-X III (Andrei) [NPC]
*GN-X III (Colasaur) [NPC]
*Ahead Smultron (Louise) [NPC]

|-
| class="fc-route3" |'''第34話：亡者再臨 Scenario 34: Resurrection of the Dead'''
| class="fc-route4" |'''第34話：白き牙 Scenario 34: White Fang'''

|-
|'''Victory Condition:''' Defeat all enemies. '''Defeat Condition:''' Any ally is defeated. Mothership is defeated. Two or more Guzards reach Dragon's Hive. '''SR Point:''' Clear the stage without letting any Guzards reach Dragon's Hive. '''Secret Requirements:''' '''Unit Acquisition:'''
*R-Daigun (Eida)
*Final Dancouga (Shinobu, Sara, Masato, Ryou, Alan)
*Dancouga Nova becomes Dancouga Nova MAXGOD, and gains Eida as a subpilot

|'''Victory Condition:''' Defeat the Hyaku Shiki (Quattro). Defeat the Gundam Epyon (Milliardo). '''Defeat Condition:''' Mothership is defeated. Lockon is defeated. '''SR Point:''' Within 3 turns, defeat all other enemies, then defeat the Hyaku Shiki. '''Secret Requirements:'''
*Anew's survival (2/2)
**You must sortie Setsuna.
**After Quattro joins you, attack (but do not defeat) Anew and Milliardo at least once.
**Shoot down Mr. Bushido and Ali Al-Saachez.
**Shoot down Anew using Lockon's second Trans-AM attack.
**Before you complete all these steps, Setsuna must have at least 70 kills.
**'''Note:''' Don't have the Ptolemaios 2 in Trans-AM Mode when these steps are completed, or Anew will be temporarily unuseable due to a bug. ([[../Secrets#Anew_Returner|Details]])
'''Unit Acquisition:'''
*Hyaku Shiki (Quattro)
*Anew leaves the Ptolemaios 2, unless secret is met
*Hyaku Shiki gains the "Mobile Suit Combination" attack

|-
| class="fc-route3" |'''第35話：昨日への決別 Scenario 35: Farewell to Yesterday'''
| class="fc-route4" |'''第35話：明日へのあがき Scenario 35: Struggle for Tomorrow'''

|-
|'''Victory Condition:''' Defeat all enemies. '''Defeat Condition:''' Mothership is defeated. Crowe or Asakim are defeated. '''SR Point:''' Accomplish one of the following within 3 turns:
*Defeat 16 enemies
*Deal 20,000 damage to Diamund
*Reduce Rook ADAMON's HP to under 70% or less
''Note:'' Defeating the Rook ADAMON (at any time) restores all SP to your units. 
'''Secret Requirements:''' '''Unit Acquisition:'''
*Shurouga (Asakim)
*King Gainer gains the "Overheat" attack

|'''Victory Condition:''' Defeat all enemies. '''Defeat Condition:''' Mothership is defeated. Crowe is defeated. '''SR Point:''' Accomplish one of the following within 3 turns:
*Defeat 16 enemies
*Deal 20,000 damage to Diamund
*Reduce Rook ADAMON's HP to under 70% or less
''Note:'' Defeating the Rook ADAMON (at any time) restores all SP to your units. 
'''Secret Requirements:''' '''Unit Acquisition:'''
*Shurouga (Asakim)

|-
| colspan="2" class="fc-std-sc" |'''第36話：加速する世界 Scenario 36: Accelerating World'''

|-
| colspan="2" |'''Victory Condition:''' Defeat all enemies. Defeat the Arietis (Aim) or force it to retreat. '''Defeat Condition:''' Any ally is defeated. Mothership is defeated. Marguerite is defeated. '''SR Point:''' Defeat the Arietis. It will retreat 4 turns after it appears or when its HP falls below 10000. '''Secret Requirements:''' '''Unit Acquisition:'''
*Gold SUMO (Harry)
*Gundam Airmaster Burst (Witz)
*Gundam Leopard Destroy (Roybea)
*Eternal (Lacus, Waltfield, Meyrin)
*Eternal and Strike Freedom Gundam/∞ Justice Gundam gain the "METEOR Sword" and "METEOR Full Burst" combo attacks
*Destiny Gundam gains the "Full Weapons Combination" attack
*Gundam X Divider (Jamil)
*Jenice Kai Enil Custom (Enil)
*Gundam DX combines with G-Falcon and gains Para as a sub-pilot
*Pearl Nail (Marguerite)

|-
| colspan="2" class="fc-std-sc" |'''第37話：銀河をステージに Scenario 37: The Galaxy is the Stage'''

|-
| colspan="2" |'''Victory Condition:''' Defeat all enemies. '''Defeat Condition:''' Mothership is defeated. Basara or Gamlin are defeated. '''SR Point:''' Defeat all initial enemies within 3 turns. '''Secret Requirements:'''
*Zero Points:
**Zero has accumulated 70 kills or more by the end of the map. This is the last available Zero Point. (+1)
*Mark of the Brave (3/4)
**Choose the Dark Continent route.
'''Unit Acquisition:'''
*VF-19 Kai Valkyrie gains the "DYNAMITE EXPLOSION" song
*VF-22S S Vogel II can initiate the "DYNAMITE EXPLOSION" combo attack with VF-19 Kai Valkyrie

|- class="fc-route-h"
|'''「本隊と共に暗黒大陸に向かう」 Head to the Dark Continent with the Main Group''' Everybody else
|'''「黒の騎士団と共にエリア11に向かう」 Head to Area 11 with the Order of the Black Knights''' Code Geass Wing Gundam Zero (Heero)

|-
| class="fc-route1" |'''第38話：告げられる絶望 Scenario 38: Confessions of Despair'''
| class="fc-route2" |'''第38話：過去からの刺客 Scenario 38: Assailant from the Past'''

|-
|'''Victory Condition:''' '''Part 1:''' Defeat all enemies. '''Part 2:''' Defeat Timp, Kan Yu, Beck, and Viral. Defeat Advanced Mugann. '''Defeat Condition:''' '''Part 1:''' Yomako is defeated. '''Part 2:''' Mothership is defeated. Simon is defeated. '''SR Point:''' In the second part, defeat all enemies and fulfill the first victory condition within 3 turns. '''Secret Requirements:'''
*Mark of the Brave (4/4)
**If all steps were met, Viral will drop it when he is defeated.
'''Unit Acquisition:'''
*Yomako (Yomako)
*Walker Gallia gains the "ICBM Toss" attack
*Gurren Lagann gains Viral as a sub-pilot, and the "W Boomerang Spiral" and "Giga Drill Maximum" attacks
*Daitarn 3 (Banjo)
*Daitarn 3, Zambot 3 and Trider G7 gain the "Invincible Combination" combo attack

|'''Victory Condition:''' Defeat all enemies. '''Defeat Condition:''' Mothership is defeated. Kallen is defeated. '''SR Point:''' Defeat all initial enemies with 3 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Shen Hu (Li Xingke)
*Guren Mk.II Flight (Kallen)

|-
| colspan="2" class="fc-std-sc" |'''第39話：禁断の継承者 Scenario 39: The Forbidden Successor'''

|-
| colspan="2" |'''Victory Condition:''' '''Part 1:''' Defeat the Strike Dog (Ypsilon) or force it to retreat. Defeat the Siegfried (V.V.). '''Part 2:''' Defeat the Strike Dog. '''Defeat Condition:''' '''Part 1:''' Zero, Chirico or Rolo are defeated. '''Part 2:''' Chirico is defeated. '''SR Point:''' In the first part, defeat all enemies within 3 turns, saving the Strike Dog for last (it retreats when under 8000 HP). '''Secret Requirements:'''
*DM Adapter
**In the first part, move Zero to the position 3 spaces down and 13 spaces right from the top left corner of the map.
'''Unit Acquisition:'''
*Daitarn 3, Zambot 3 and Trider G7 gain the "3-3-7 Beat" combo attack
*Scopedog's Red Shoulder Custom parts become the TC-LRS parts
*Vincent Flight Type (Rolo)
*Sutherland (Jeremaiah)
*Scopedog (Chirico)
*Akatsuki Retainer Type (C.C.)

|-
| colspan="2" class="fc-std-sc" |'''第40話：歌え、誰かのために Scenario 40: Singing, but for Who?'''

|-
| colspan="2" |'''Victory Condition:''' Defeat all enemies. Defeat all enemies within 5 turns after the Mobile Dolls appear. '''Defeat Condition:''' Mothership is defeated. Kei or Renton are defeated. '''SR Point:''' Defeat all initial enemies with 3 turns. '''Secret Requirements:'''
*Hyper Jammer (1/2)
**Choose the Japan route.
*Scopedog Twin Missile Pods (1/2) and 2nd Mark of the Brave (1/2)
**Choose the Frontier Fleet route.
'''Unit Acquisition:'''
*Guren Mk.II Flight -> Guren SEITEN Eight Elements (Kallen)
*Orguss gains the "Orguss Combination" attack
|} 

== Stages 41 - 49==
{| width="100%"
|- class="fc-route-h"
|'''「日本!へ向かう」 Head to Japan''' Zambot 3 Daitarn 3 Trider G7 Godsigma Baldios Tetsujin 28 Godmars Xabungle Dancouga Dancouga Nova Getter Robo Armageddon Shin Mazinger Z Dai-Guard The Big O Overman King Gainer Gravion Aquarion Gurren Lagann
|'''「フロンティア船団に向かう」 Head to the Frontier Fleet''' Orguss Zeta Gundam Char's Counterattack Gundam Wing Gundam X Turn-A Gundam Gundam SEED Destiny Gundam 00 Macross 7 Macross Frontier Code Geass Eureka 7 ''Recruit:'' VOTOMS

|-
| class="fc-route3" |'''第41話：遺恨！くろがね屋の一番長い日！ Scenario 41: Regret! Kurogane House's Longest Day!'''
| class="fc-route4" |'''第41話：トライアングラー Scenario 41: Triangular'''

|-
|'''Victory Condition:''' Defeat Energer Z. Defeat all enemies. '''Defeat Condition:''' Mothership is defeated. Kouji is defeated. '''SR Point:''' Within 3 turns, defeat all other enemies, then defeat Energer Z. '''Secret Requirements:'''
*Hyper Jammer (2/2)
**Move Koji over to the Kabuto House (2 spaces down and 8 spaces left from the top right corner).
'''Unit Acquisition:'''
*Boss Borot (Boss, Nuke, Mucha)
*Venus A gains the "Mazinger Corps Attack" attack
*Mazinger Z upgrades:
**Loses the "Scrander Cut" attack, gains the "Big Bang Punch" attack (and MAP version)
**Gains +10 mobility, +1 movement and A-rank in all terrains

|'''Victory Condition:''' '''Part 1:''' Defeat all enemies. '''Part 2:''' Survive for 5 turns, or defeat all enemies. '''Defeat Condition:''' '''Part 1:''' Klan is defeated. '''Part 2:''' Alto or Klan are defeated. Any enemy unit reaches the target area. '''SR Point:''' In the second part, defeat all enemies within 4 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Armored Klan (Klan)
*VF-22S S Vogel II gains the "Large Anti-Ship Reaction Warhead" attack
*VF-25F and VF-25G both gain the "Reaction Warhead" and "MDE Warhead (MAP)" attacks

|-
| class="fc-route3" |'''第42話：父ちゃんから受け継いだもの Scenario 42: What I Inherited from Father'''
| class="fc-route4" |'''第42話：異能者 Scenario 42: Abnormality'''

|-
|'''Victory Condition:''' Defeat all enemies. '''Defeat Condition:''' Mothership is defeated. Watta or Takeru are defeated. '''SR Point:''' Kakikouji must earn more than 35000 funds from shooting down enemies by the end of the stage. '''Secret Requirements:''' '''Unit Acquisition:'''
*Shuttle -> New Shuttle (Kakikouji, Atsui, Tohachiro, Ikue)
*Trider G7 gains the "Trider Lure" attack
*Zambot 3 gains the "Combination Attack" attack
*Baldios gains the "Baldirosier" attack
*God Sigma gains the "Trinity Wing" attack
*Dai Guard gains the "Great Knot Punisher" attack

|'''Victory Condition:''' Chirico reaches the target area, or defeat all enemies. Defeat the Gadessa, Garazzo and Gundam Epyon. '''Defeat Condition:''' Mothership is defeated. Chirico is defeated. '''SR Point:''' Defeat all enemies before Chirico reaches the target area. '''Secret Requirements:''' '''Unit Acquisition:'''
*Scopedog Round Mover (Chirico) [NPC]
*Berserga (Ru Shako)
*Brutishdog (Fyana)
*Scopedog TC-LRS (Gregore)

|-
| class="fc-route3" |'''第43話：闇を断つ牙 Scenario 43: The Fang that Crushes Darkness'''
| class="fc-route4" |'''第43話：修羅 Scenario 43: Carnage'''

|-
|'''Victory Condition:''' Defeat the Original Dancouga (Moon WILL). '''Defeat Condition:''' Mothership is defeated. Touga, Shinobu or Aoi are defeated. Any enemy unit passes through the second defense line. '''SR Point:''' Within 3 turns, defeat all other enemies, then defeat Original Dancouga, while preventing any enemies from passing through the first defense line. '''Secret Requirements:''' '''Unit Acquisition:'''
*God Sigma Gravion (Sandman)
*Sol Gravion and God Sigma Gravion gain the "Choujuu Enouzan" combo attack
*Dragon's Hive (F.S, Tanaka, WILL)
*Dancouga Nova MAXGOD can initiate the "Absolute Nova Beast" combo attack with Dragon's Hive
*Final Dancouga gains the "Final Dankuukougaken" attack

|'''Victory Condition:''' '''Part 1:''' Defeat the Rabidly Dog (Chirico). '''Part 2:''' Defeat all enemies. '''Defeat Condition:''' '''Part 1:''' Mothership is defeated. Fyana is defeated. '''Part 2:''' Chirico or Fyana are defeated. '''SR Point:''' In the first part, have Fyana, Shako and Gregore defeat 3 enemies each, then defeat the Rabidly Dog within 4 turns. (Do not allow Shako or Gregore to be shot down.) '''Secret Requirements:'''
*2nd Mark of the Brave (2/2)
**In the first part, move Shako 8 spaces up and 1 space right from his sortie position.
*Scopedog Twin Missile Pods (2/2)
**In the second part, Chirico and Fyana must defeat at least 3 enemies each.
**Chirico must have at least 70 kills by the end of this stage.
'''Unit Acquisition:'''
*Rabidly Dog (Chirico)
*Scopedog
*Scopedog TC-ISS
*Scopedog Twin Missile Pods - additional unit for Chirico and Fyana
*Akatsuki Retainer Type (C.C.)

|-
| colspan="2" class="fc-std-sc" |'''第44話：降臨！！終末を呼ぶ邪神！ Scenario 44: Advent!! The Evil God that Brings Forth the End!'''

|-
| colspan="2" |'''Victory Condition:''' Defeat Shin Dragon. Defeat Metal Beast Dragon (Saotome). '''Defeat Condition:''' Mothership is defeated. Go, Ryoma or Apollo are defeated. '''SR Point:''' Within 4 turns, defeat all other enemies, then defeat Shin Dragon. '''Secret Requirements:''' '''Unit Acquisition:'''
*Yoko M Tank (Yoko)
*King Kittan (Kittan)
*Grapearl gains the "Spiral Barrier Warhead Rifle" attack
*Tower (Hayato, Shikishima)
*Shin Getter loses Go, Kei and Gai as pilots
*Shin Getter gains Ryoma, Hayato and Benkei as pilots
**Black Getter also gains Hayato and Benkei as sub-pilots after the stage
*Solar Aquarion gains the "Solar Sword" attack (for pilot set A only)
*Shin Getter 1 gains the "Stoner Sunshine" attack
*Stelva gains the "Super Robot Army Simultaneous Attack" attack

|-
| colspan="2" class="fc-std-sc" |'''第45話：次元力 Scenario 45: Dimension Power'''

|-
| colspan="2" |'''Victory Condition:''' Defeat the Rook ADAMON within 5 turns. Defeat Seiouki The Insa (Uther). '''Defeat Condition:''' Mothership is defeated. Crowe is defeated. Reach the 6th turn. '''SR Point:''' Within 4 turns, defeat all other enemies, then defeat Rook ADAMON. '''Secret Requirements:''' '''Unit Acquisition:'''
*Li-Brasta gains the "Unbreakable Fulcrum" attack
*Pearl Nail (Marguerite)

|-
| colspan="2" class="fc-std-sc" |'''第46話：失われし聖王国 Scenario 46: The Lost Holy Kingdom'''

|-
| colspan="2" |'''Victory Condition:''' Defeat all enemies other than the Palace Insalaum (Ambroan). Defeat Diamund (Wayne). '''Defeat Condition:''' Mothership is defeated. Roger or Crowe are defeated. Palace Insalaum is defeated. '''SR Point:''' Defeat 24 enemies within 2 player turns. '''Secret Requirements:'''
*Insalaum's Secret Treasure
**Move Marguerite to the position 2 spaces down and 9 spaces left from the top right corner of the map.
'''Unit Acquisition:'''
*Nirvash spec2 -> Nirvash specV (Renton, Eureka, Nirvash)
*Big O gains the "Final Stage" attack
*Brasta Es (Esther)
**Gains +400 HP, +100 armor, +5 mobility, +5 sight, +300 weapon power (+400 for ACP Iota), +5 hit for all weapons, +2 ammo for ACP Iota, and a third part slot

|-
| colspan="2" class="fc-std-sc" |'''第47話：死線！総攻撃Ｄｒ．ヘル！ Scenario 47: Line of Death! Dr. Hell's Final Assault!'''

|-
| colspan="2" |'''Victory Condition:''' Defeat Ashura, Brocken, and Pygman. Defeat Hell King Gordon (Dr. Hell). '''Defeat Condition:''' Mothership is defeated. Kouji is defeated. '''SR Point:''' Within 4 turns, defeat all other enemies, then fulfill the first victory condition. You must also defeat Ashura, Brocken, and Pygman in the same turn. '''Secret Requirements:'''
*Super Alloy Z
**Deploy Boss and move him to the position 1 space up and left from the bottom right corner of the map.
'''Unit Acquisition:'''
*Mazinger Z gains the "100 Rapid Fire Rocket Punches" attack

|-
| colspan="2" class="fc-std-sc" |'''第48話：ゴッドブレス・ユニバース Scenario 48: God Bless Universe'''

|-
| colspan="2" |'''Victory Condition:''' Defeat all enemies. Defeat Emperor Muge. '''Defeat Condition:''' Mothership is defeated. Shinobu, Aoi or Basara are defeated. '''SR Point:''' Defeat 50 enemies within 4 player turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Final Dancouga and Dancouga Nova MAXGOD gain the "Dankuusougaken" combo attack
*Cosmo Crusher gains Rose as a sub-pilot

|-
| colspan="2" class="fc-std-sc" |'''第49話：ゼロとルルーシュ Scenario 49: Zero and Lelouch'''

|-
| colspan="2" |'''Victory Condition:''' Defeat all enemies. '''Defeat Condition:''' Mothership is defeated. Zero, C.C. or Kallen are defeated. '''SR Point:''' Defeat the Avalon (Schneizel). It will retreat if any of the following conditions are met:
*Avalon's HP drops below 10,000
*Turn 5 is reached
*There are 10 or fewer enemy units left on the map (including Avalon)
'''Secret Requirements:'''
*Vincent Flight Type and Terminus 303 SP
**These units are exclusive to the Believe in Zero route.
'''Unit Acquisition:'''
*Sutherland Sieg (Jeremiah) - stays if you choose Believe in Zero
*Vincent Flight Type (Rolo) - stays if you choose Believe in Zero
*Upon choosing the Don't Believe in Zero route:
**Shinkirou (Zero)
**Akatsuki Retainer Type (C.C.)
|} 

==Stages 50 - END==
{| width="100%"
|- class="fc-route-h"
|'''「ゼロを信じない」 Don't Believe in Zero''' Zero Requiem / Default route
|'''「ゼロを信じてみる」 Believe in Zero''' The Order of the Black Knights / IF route Requires 5 or more Zero Points, or New Game+

|-
| class="fc-route1" |'''第50話：皇帝失格 Scenario 50: The Emperor Dethroned'''
| class="fc-route2" |'''第50話：超合集国決議第壱号 Scenario 50: U.F.N. Resolution #1'''

|-
|'''Victory Condition:''' '''Part 1:''' Defeat Charles' Logress-Class Battleship. '''Part 2:''' Defeat all enemies. '''Defeat Condition:''' '''Part 1:''' Mothership is defeated. Charles reaches the target area. Zero is defeated. '''Part 2:''' Mothership is defeated. '''SR Point:''' In the first part, defeat all other enemies, then defeat Charles. '''Secret Requirements:''' '''Unit Acquisition:'''
*Shinkirou (Zero)

|'''Victory Condition:''' Defeat Charles' Logress-Class Battleship. Defeat all enemies. '''Defeat Condition:''' Mothership is defeated. Zero is defeated. '''SR Point:''' Within 3 turns, defeat all other enemies, then defeat Charles. '''Secret Requirements:''' '''Unit Acquisition:'''

|-
| class="fc-route1" |'''第51話：シュナイゼルの仮面 Scenario 51: Schneizel's Mask'''
| class="fc-route2" |'''第51話：戦乱の王ピースクラフト Scenario 51: King of War Peacecraft'''

|-
|'''Victory Condition:''' Defeat the Damocles (Schneizel). '''Defeat Condition:''' Mothership is defeated. '''SR Point:''' Within 4 turns, defeat Lancelot Albion, Sutherland Sieg, Avalon, Mordred, and Tristan, then defeat Damocles. '''Secret Requirements:''' '''Unit Acquisition:'''

|'''Victory Condition:''' Defeat all enemies. Defeat Regnant (Louise) or Susanowo (Mr. Bushido). Defeat Arietis (Aim). '''Defeat Condition:''' Mothership is defeated. Setsuna or Suzaku are defeated. '''SR Point:''' Defeat all Vayate and Mercurius units within 2 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Lancelot Albion (Suzaku)

|-
| class="fc-route1" |'''第52話：混迷の戦場 Scenario 52: Chaotic Battlefield'''
| class="fc-route2" |'''第52話：決死のエンドゲーム Scenario 52: Desperate Endgame'''

|-
|'''Victory Condition:''' Defeat all enemies. Defeat Regnant (Louise) and Susanowo (Mr. Bushido). Defeat Tallgeese II (Treize). '''Defeat Condition:''' Mothership is defeated. Setsuna or Heero are defeated. '''SR Point:''' Defeat 30 enemies within 2 turns. Do not allow any ESF or White Fang units to shoot each other down. '''Secret Requirements:''' '''Unit Acquisition:'''

|'''Victory Condition:''' Defeat all enemies. Defeat the Damocles (Schneizel). '''Defeat Condition:''' Mothership is defeated. Zero or Suzaku are defeated. '''SR Point:''' Defeat all initial enemies within 3 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Akatsuki Retainer Type -> Lancelot Frontier (C.C.)

|-
| class="fc-route1" |'''第53話：堕ちてくる月 Scenario 53: The Moon Falls'''
| class="fc-route2" |'''第53話：最後の勝利者 Scenario 53: The Final Victor'''

|-
|'''Victory Condition:''' Defeat Kou Mugann and Kyo Mugann. Defeat Kukyo Mugann. '''Defeat Condition:''' Mothership is defeated. Arc Gurren is defeated. Simon is defeated. '''SR Point:''' Within 3 turns, defeat all other enemies, then defeat Kou Mugann and Kyo Mugann. '''Secret Requirements:''' '''Unit Acquisition:'''
*Arc Gurren (Dayakka)
*Gurren Lagann gains the "Burst Spinning Punch" attack

|'''Victory Condition:''' Defeat the Libra. Defeat Gundam Epyon (Milliardo) and Tallgeese II (Treize). '''Defeat Condition:''' Mothership is defeated. Heero is defeated. '''SR Point:''' Within 4 turns, defeat all other enemies, then defeat Libra. Heero must move to the destination point before you defeat Libra. '''Secret Requirements:''' '''Unit Acquisition:'''

|-
| class="fc-route1" |'''第54話：絶望の世界 Scenario 54: World of Despair'''
| class="fc-route2" |'''第54話：決戦！！果てなき進化へ！ Scenario 54: Showdown!! Towards Endless Evolution!'''

|-
|'''Victory Condition:''' '''Part 1:''' Defeat the Cathedral Lazengann. Defeat Emperor Zuul and Emperor Muge. '''Part 2:''' Defeat the Anti-Gurren Lagann. '''Defeat Condition:''' '''Part 1:''' Mothership is defeated. Arc Gurren is defeated. Ryoma, Simon or Takeru are defeated. '''Part 2:''' Simon is defeated. '''SR Point:''' In the first part, defeat all enemies within 3 turns, saving the Cathedral Lazengann for last. '''Secret Requirements:''' '''Unit Acquisition:'''
*Arc Gurren (Dayakka)
*Tower -> Shin Getter Dragon (Go, Kei, Gai)
**Kei and Gai become sub-pilots only, and can only learn SP Up and SP Regen (their spent PP is refunded)
*Shin Getter 1 and Shin Getter Dragon gain the "Final Getter Tomahawk" and "Shin Shine Spark" combo attacks
*Virgola Glory (Setsuko)
**Gains +10 EN, +5 mobility, "High Stray Turret" and "Nautilus Carver" gain +400 DMG and "The Glory Star" gain +600 DMG
*Gunleon (Rand, Mel)
**Gains the "Pain Shouter" and "The Heat Crusher" attacks
*God Mars gains the "Super Final God Mars" attack and the "Final God Mars" attack is enhanced
*VF-25S Messiah AP (Ozma)
*RVF-25 Messiah SP (Luca)
**''Note:'' If the Frontier Fleet route wasn't chosen at scenario 4, Ozma and Luca will sortie with no upgrades.

|'''Victory Condition:''' Defeat all enemies. Defeat Cowen & Stinger within 5 turns of its appearance. '''Defeat Condition:''' Mothership is defeated. Ryoma is defeated. Five turns pass since Cowen & Stinger's arrival. '''SR Point:''' Have any one ally defeat 10 or more enemies before clearing the stage. '''Secret Requirements:''' '''Unit Acquisition:'''
*Tower -> Shin Getter Dragon (Go, Kei, Gai)
**Kei and Gai become sub-pilots only, and can only learn SP Up and SP Regen (their spent PP is refunded)
*Shin Getter 1 and Shin Getter Dragon gain the "Final Getter Tomahawk" and "Shin Shine Spark" combo attacks
*Virgola Glory (Setsuko)
**Gains +10 EN, +5 mobility, "High Stray Turret" and "Nautilus Carver" gain +400 DMG and "The Glory Star" gain +600 DMG
*Gunleon (Rand, Mel)
**Gains the "Pain Shouter" and "The Heat Crusher" attacks
*Terminus 303 SP (Holland)
*Tristan Divider (Gino)
*Mordred (Anya)
*VF-25S Messiah AP (Ozma)
*RVF-25 Messiah SP (Luca)
**''Note:'' If the Frontier Fleet route wasn't chosen at scenario 4, Ozma and Luca will sortie with no upgrades.

|-
| class="fc-route1" |'''第55話：アナタノオト Scenario 55: Your Song (Anata no Oto)'''
| class="fc-route2" |'''第55話：復活の暗黒神 Scenario 55: The God of Darkness Revives'''

|-
|'''Victory Condition:''' Defeat Giant Ranka. Defeat the Battle Galaxy. Defeat the Vajra Queen (Grace). '''Defeat Condition:''' Mothership is defeated. Alto or Basara are defeated. '''SR Point:''' Within 3 turns, defeat 32 or more enemies, then defeat Giant Ranka. '''Secret Requirements:'''
*YF-29 Durandal
**Alto must have 70 or more kills before you begin this stage.
**If not playing New Game+, Alto must also have the highest kill count of all the Macross Frontier pilots (compared to Ozma, Mikhail, Luca, Klan, or Canaria; excluding Jeffrey).
**Shoot down both Ranka and Brera with Alto.
'''Unit Acquisition:'''
*Macross Quarter {Assault Mode] gains the "Macross Attack" attack
*VF-27y Lucifer (Brera)
*YF-29 Durandal (Alto)
*RVF-25 Messiah gains the "Ghost Judah System" attack
*VF-25F Messiah gains the Armored Pack parts

|'''Victory Condition:''' Defeat Kou Mugann and Kyo Mugann. Defeat Kukyo Mugann. Defeat the Cathedral Lazengann. '''Defeat Condition:''' Mothership is defeated. Arc Gurren is defeated. Simon is defeated. Cathedral Lazengann reaches the designated point. '''SR Point:''' Within 3 turns, defeat all other enemies, then defeat Kou Mugann and Kyo Mugann. Defeating Shurouga (Asakim) is optional. '''Secret Requirements:''' '''Unit Acquisition:'''
*Arc Gurren (Dayakka)
*Gurren Lagann gains the "Burst Spinning Punch" attack

|-
| class="fc-route1" |'''第56話： BEYOND Scenario 56: BEYOND'''
| class="fc-route2" |'''第56話：奈落への螺旋 Scenario 56: Spiral of Hell'''

|-
|'''Victory Condition:''' Defeat the Regnant (Louise). Defeat Gadessa and Garazzo. Defeat the Reborns Gundam (Ribbons). '''Defeat Condition:''' Mothership is defeated. Setsuna or Tieria are defeated. '''SR Point:''' Within 3 turns, defeat all other enemies, then defeat Regnant. Defeating Arche Gundam (Ali-Al Saachez) is optional. '''Secret Requirements:''' '''Unit Acquisition:'''
*Gundam Epyon (Milliardo)
*Lancelot Albion (Suzaku)
*Setsuna gains the "Innovator" special skill

|'''Victory Condition:''' '''Part 1:''' Defeat all enemies. Defeat Emperor Zuul and Emperor Muge. '''Part 2:''' Defeat the Anti-Gurren Lagann. '''Defeat Condition:''' '''Part 1:''' Mothership is defeated. Arc Gurren is defeated. Simon or Takeru are defeated. '''Part 2:''' Simon is defeated. '''SR Point:''' Defeat all initial enemies within 3 player turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Arc Gurren (Dayakka)
*God Mars gains the "Super Final God Mars" attack and the "Final God Mars" attack is enhanced

|-
| class="fc-route1" |'''第57話：ゼロ・レクイエム Scenario 57: Zero Requiem'''
| class="fc-route2" |'''第57話：ネクスト・フロンティア Scenario 57: Next Frontier'''

|-
|'''Victory Condition:''' Defeat all enemies. Defeat the Arietis (Aim). Defeat the Damocles (Lelouch). '''Defeat Condition:''' Mothership is defeated. Heero is defeated. '''SR Point:''' Defeat Sutherland Sieg, Lancelot Frontier, Lancelot Albion, Susanowo, and Gundam Epyon all in the same turn. '''Secret Requirements:''' '''Unit Acquisition:'''
*Tristan Divider (Gino)
*Mordred (Anya)
*Shinkirou (Zero)
*Akatsuki Retainer Type -> Lancelot Frontier (C.C.)
*Lancelot Albion (Suzaku)
*Sutherland Sieg (Jeremiah)

|'''Victory Condition:''' Defeat Giant Ranka. Defeat the Battle Galaxy, Regnant (Louise) and Arche Gundam (Ali-Al Saachez). '''Defeat Condition:''' Mothership is defeated. Alto, Basara or Setsuna are defeated. '''SR Point:''' Within 3 turns, defeat 30 or more enemies, then defeat Giant Ranka. '''Secret Requirements:'''
*YF-29 Durandal
**Alto must have 70 or more kills by the end of this stage.
**If not playing New Game+, Alto must also have the highest kill count of all the Macross Frontier pilots (compared to Ozma, Mikhail, Luca, Klan, or Canaria; excluding Jeffrey).
**Shoot down both Ranka and Brera with Alto.
'''Unit Acquisition:'''
*00 Raiser reverts back to 00 Gundam and loses Saji until the end of the stage
*Macross Quarter [Assault Mode] gains the "Macross Attack" attack

|-
| class="fc-route1" |'''第58話：閃光！！進化の果て！ Scenario 58: Flash!! The End of Evolution!'''
| class="fc-route2" |'''第58話：革新 Scenario 58: Innovation'''

|-
|'''Victory Condition:''' Defeat all enemies. Defeat Cowen & Stinger. '''Defeat Condition:''' Mothership is defeated. Ryoma is defeated. '''SR Point:''' Defeat all initial enemies within 3 turns. '''Secret Requirements:''' '''Unit Acquisition:'''

|'''Victory Condition:''' Defeat Gadessa and Garazzo. Defeat Reborns Gundam (Ribbons) and Vajra Queen (Grace). '''Defeat Condition:''' Mothership is defeated. Setsuna, Tieria, Heero, Alto or Basara are defeated. '''SR Point:''' Defeat Gadessa and Garazzo within 3 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Setsuna gains the "Innovator" special skill
*VF-27y Lucifer (Brera)
*YF-29 Durandal (Alto)
*RVF-25 Messiah gains the "Ghost Judah System" attack
*VF-25F Messiah gains the "Armored Pack" parts

|-
| class="fc-route1" |'''第59話：最後の聖王 Scenario 59: The Last Holy King'''
| class="fc-route2" |'''第59話：大逆のインサラウム Scenario 59: Insalaum's Betrayal'''

|-
|'''Note:''' Flying units in this map count as being in space terrain.
<hr>'''Victory Condition:''' Defeat the Palace Insalaum (Ambroan). Defeat the Exa ADAMON. Defeat Seiouki the Insa (Uther) and Pearl Fang (Marilyn). '''Defeat Condition:''' Mothership is defeated. '''SR Point:''' Within 3 turns, defeat all other enemies, then defeat Palace Insalaum. '''Secret Requirements:''' '''Unit Acquisition:'''

|'''Note:''' Flying units in this map count as being in space terrain.
<hr>'''Victory Condition:''' Defeat the Palace Insalaum (Ambroan). Defeat all enemies. '''Defeat Condition:''' Mothership is defeated. '''SR Point:''' Within 4 turns, defeat all other enemies, then defeat Palace Insalaum. '''Secret Requirements:''' '''Unit Acquisition:'''

|-
| class="fc-route1" |'''最終話：再世の未来 Final Scenario: Rebirth's Future'''
| class="fc-route2" |'''最終話：再世する次元 Final Scenario: Rebirth's Dimension'''

|-
|'''Note:''' Flying units in this map count as being in space terrain.
<hr>'''Victory Condition:''' Defeat the Shurouga (Asakim). Defeat Gaiou. '''Defeat Condition:''' Mothership is defeated. '''Secret Requirements:''' '''Unit Acquisition:'''

|'''Note:''' Flying units in this map count as being in space terrain.
<hr>'''Victory Condition:''' Defeat Seiouki the Insa (Uther). Defeat Gaiou. '''Defeat Condition:''' Mothership is defeated. '''Secret Requirements:'''
*Fight the Strongest Version of Gaiou
**When Gaiou's 2nd form appears, answer his question to Crowe with the bottom option, then bottom again to confirm. Gaiou will power up to level 99.
'''Unit Acquisition:'''
|}

Super Robot Wars/Alpha 3/Flow Chart

2023-06-28T12:58:23Z

KomodoWork: /* Stages 01 - 18 */ Just correcting the spelling on "Moebius Zero" unit

Units and Pilots in Black join your team. 
Units and Pilots in Orange are available for that stage, then leave. 
Units and Pilots in Blue have special requirements. Check the [[../Secrets|Secrets]] page for more details. 
Units and Pilots in Red previously joined, but from this point, are rendered unusable. Those lost permanently are marked so, while others rejoin later on. 
Information in Green are upgrades for units already in your party.

==Stages 01 - 18==
{| width="100%"
|- class="fc-route-h"
| width="25%" |'''Touma Route'''
| width="25%" |'''Kusuha Route'''
| width="25%" |'''Cobray Route'''
| width="25%" |'''Selena Route'''

|-
| class="fc-route1" |'''第１話：闘志、炎に燃ゆる Scenario 1 - Within the Flames, Fighting Spirit Rises'''
| class="fc-route2" |'''第１話：出撃！鋼の龍虎 Scenario 1 - Launch! Dragon and Tiger of Steel'''
| class="fc-route3" |'''第１話：虚空からの転生 Scenario 1 - Reincarnated from the Void'''
| class="fc-route4" |'''第１話：シークレット・ミッション Scenario 1 - Secret Mission'''

|-
|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Any allied unit is defeated '''Skill Point:''' Defeat all enemies in 3 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Raioh (Touma)
*GaoGaiGar (Guy)
*Goldymarg (Goldymarg)
*HyoRyu (HyoRyu)
*EnRyu (EnRyu)

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Any allied unit is defeated '''Skill Point:''' Defeat all enemies in 2 turns '''Secret Requirements:'''
*Bullet
**You must be playing as Kusuha to recruit Bullet.
'''Unit Acquisition:'''
*Gouryu Kai (Kusuha)
*Raikou Kai (Bullet)
*Mazinkaiser (Kouji)
*Diana A (Sayaka)
*Shin Getter (Ryoma, Hayato, Benkei)
*Lady Command (Michiru)

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' (1) Werkbau is defeated; (2) Werkbau is defeated, ally battleship is defeated '''Skill Point:''' Defeat all enemies in 5 turns after enemy reinforcements show up '''Secret Requirements:'''
*Arado and Seolla
**You must be playing as Cobray to recruit Arado and Seolla.
'''Unit Acquisition:'''
*Werkbau (Cobray)
*Nu Gundam (Amuro)
*Ra Cailum (Bright, Torres)
*MP Nu Gundam (Kayra)
*Jegan (Katz)
*Incom & Funnel parts for MP Nu Gundam

|'''Victory Condition:''' (1) All enemies except Salamis Kai shot down; (2) R-Gun Powered shot down '''Defeat Condition:''' (1) Selena shot down, Salamis Kai shot down; (2) Selena shot down '''Skill Point:''' Defeat all enemies except the Salamis Kai in 4 turns '''Secret Requirements:'''
*Ibis and Slay
**You must be playing as Selena to recruit Ibis and Slay.
'''Unit Acquisition:'''
*AS Soleares (Selena, Elma)
*Albion (Synapse, Paserov)
*GP03 Dendrobium (Kou)
*GM Cannon II (Keith)
*GM Custom (Burning)
*GM Custom (Bate)
*GM Custom (Monsha)
*GM Cannon II (Adel)
*Zeta Gundam (Kamille)
*Re-GZ BWS (Four)
*Methuss (Fa)
*Super Gundam (Emma)
*Armed Fortress Orchis parts for Gundam Stamen
*G Defensor parts for Gundam Mk-II

|-
| class="fc-route1" |'''第２話: さらばGGG、さらば勇者 Scenario 2 - Farewell, GGG! Farewell, Braves!'''
| class="fc-route2" |'''第２話: 新たなる侵略者！立ち上がれV Scenario 2 - New Invaders! Rise Up, V!'''
| class="fc-route3" |'''第２話: 血の狼煙 Scenario 2 - Beacon Fire of Blood'''
| class="fc-route4" |'''第２話: フラッシュ・デイ Scenario 2 - Flash Day'''

|-
|'''Victory Condition:''' Defeat all enemies; Defeat ZX-01 '''Defeat Condition:''' Any allied unit is defeated '''Skill Point:''' Defeat the 4 Zonders in 2 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*GaoGaiGar (Guy)
*J-Der (J, Tomoro)
*Great Mazinger (Tetsuya)
*Venus A (Jun)
*Boss Borot (Boss, Nuke, Mucha)
*Kotetsu Jeeg (Jeeg)
*Big Shooter (Miwa)

|'''Victory Condition:''' (1) Defeat all enemies, (2) Defeat Dangel '''Defeat Condition:''' (1) Hyouma defeated (2) Any Allied Unit is defeated '''Skill Point:''' Defeat all enemies in 3 turns, do not lose any Federation Army squads '''Secret Requirements:''' '''Unit Acquisition:'''
*Combattler V (Hyoma, Juzo, Daisaku, Chizuru, Kosuke)
*Jegan (Federation Soldier) x 3

|'''Victory Condition:''' (1) Defeat the Magellan Kai-class Battleship (2) Defeat the Magellan Kai-class Battleship and Nuclear Missiles '''Defeat Condition:''' (1) Any ally unit is defeated (2) Nuclear Missiles reach the marked area on the map '''Skill Point:''' Defeat the enemy missiles and battleship in 7 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Clop-class (Federation Captain)
*Wildfalken (Seolla)
*MP Nu Gundam (Cobray)
*ZZ Gundam (Judau)
*Re-GZ BWS (Roux)
*Albion (Synapse, Paserov)
*GP03 Dendrobium (Kou)
*GM Cannon II (Keith)
*GM Custom (Burning)
*GM Custom (Bate)
*GM Custom (Monsha)
*GM Cannon II (Adel)
*Zeta Gundam (Kamille)
*Re-GZ BWS (Four)
*Methuss (Fa)
*Super Gundam (Emma)
*Armed Fortress Orchis parts for Gundam Stamen
*G Defensor Parts for Gundam Mk-II

|'''Victory Condition:''' Defeat any enemy battleship '''Defeat Condition:''' (1) Allied battleship is defeated; (2) Allied battleship is defeated, Selena is defeated '''Skill Point:''' Defeat the enemy battleship in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*ZZ Gundam (Judau)
*Re-GZ BWS (Roux)
*Nu Gundam (Amuro)
*Ra Cailum (Bright)
*Jegan (Katz)
*MP Nu Gundam (Keyra)
*AS Soleares (Selena, Elma)
*Incom & Funnel parts for MP Nu Gundam

|-
| colspan="4" class="fc-std-sc" |'''第３話: 逆襲！機界31原種 Scenario 3 - Counterattack! The 31 Machine Primevals!'''

|-
| colspan="4" |'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' (1) Ally battleship is defeated, One of the Machine Primevals reaches the edge of the map; (2) Ally battleship is defeated, One of the Machine Primevals reaches the edge of the map, J is defeated '''Skill Point:''' Defeat all enemies in 6 turns '''Secret Requirements:''' '''Unit Acquisition (Touma & Kusuha):'''
*J-Ark (J, Tomoro)
*Nu Gundam (Amuro)
*Ra Cailum (Bright, Torres)
*Jegan (Katz)
*MP Nu Gundam (Keyra)
*Albion (Synapse, Paserov)
*GP03 Dendrobium (Kou)
*GM Cannon II (Keith)
*GM Custom (Burning)
*GM Custom (Bate)
*GM Custom (Monsha)
*GM Cannon II (Adel)
*Zeta Gundam (Kamille)
*Re-GZ BWS (Four)
*Methuss (Fa)
*Super Gundam (Emma)
*Incom & Funnel parts for MP Nu Gundam
*Armed Fortress Orchis parts for Gundam Stamen
*G Defensor Parts for Gundam Mk-II
'''Unit Acquisition (Cobray & Selena):'''
*J-Ark (J, Tomoro)
*Mazinkaiser (Kouji)
*Diana A (Sayaka)
*Great Mazinger (Tetsuya)
*Venus A (Jun)
*Combattler V (Hyoma, Juzo, Daisaku, Chizuru, Kosuke)
*Koutetsu Jeeg (Jeeg)
*Big Shooter (Miwa)
*Shin Getter (Ryoma, Hayato, Benkei)
*Lady Command (Michiru)

|-
| colspan="4" class="fc-std-sc" |'''第４話：地獄門、開く Scenario 4 - The Gates of Hell Open'''

|-
| colspan="4" |'''Victory Condition:'''
*1st Part: Allied Battleship reaches the escape point in 5 turns, All Enemies are defeated in 5 turns
*2nd Part: Defeat all enemies
'''Defeat Condition:'''
*1st Part: Allied Battleship is defeated, Turn 6 starts
*2nd Part: SRX is defeated
'''Skill Point:''' Defeat all enemies in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*SRX (Damaged) (Ryuusei, Rai, Aya)

|-
| colspan="4" class="fc-std-sc" |'''第５話: 地球圏絶対防御線 Scenario 5 - The Earth Sphere’s Absolute Defense Line'''

|-
| colspan="4" |'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' (1) Ally battleship is defeated (2) Any allied unit is defeated '''Skill Point:''' Clear the stage in 6 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Moebius Zero (Mwu)
*All Char's Counter Attack, Stardust Memory, and Zeta Gundam units are lost <ul><li>Nu Gundam(Amuro)</li><li>Ra Cailum (Bright, Torres)</li><li>MP Nu Gundam (Keyra)</li><li>Albion (Synapse, Paserov)</li><li>GP03 Dendrobium (Kou)</li><li>GM Cannon II (Keith)</li><li>GM Custom (Burning)</li><li>GM Custom (Bate)</li><li>GM Custom (Monsha)</li><li>GM Cannon II (Adel)</li><li>Zeta Gundam (Kamille)</li><li>Re-GZ BWS (Four)</li><li>Methuss (Fa)</li><li>Super Gundam (Emma)</li><li>Jegan (Katz)</li></ul>

|- class="fc-route-h"
|'''Touma Route''' Great Mazinger, Venus A, Boss Borot Steel Jeeg, Big Shooter
|'''Kusuha Route''' Getter Robo G, Lady Command Mazinger Z, Diana A Combattler V
|'''Cobray Route''' ZZ Gundam, ReGZ (BWS) Moebius Zero
|'''Selena Route'''
|-
| class="fc-route1" |'''第６話：平和、遥か遠く Scenario 6 - A Faraway Peace'''
| class="fc-route2" |'''第６話：北米戦線、異常アリ Scenario 6 - Abnormalities on the North American Front'''
| class="fc-route3" |'''第６話：GUNDAM出撃 Scenario 6 - Gundam, Sortie'''
| class="fc-route4" |'''第６話：ザ・ビギニング Scenario 6 - The Beginning'''

|-
|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Any ally is defeated '''Skill Point:''' Defeat all enemies in 5 turns; Defeat the Yamata no Orochi last '''Secret Requirements:''' '''Unit Acquisition:'''
*GaiGar (Gai)
*Mic Sounders XIII (Mic Sounders XIII)

|'''Victory Condition:''' (1) Ally reaches the designated area; (2) Defeat all enemies '''Defeat Condition:''' Any ally defeated '''Skill Point:''' Reach target location without engaging in combat '''Secret Requirements:''' '''Unit Acquisition:'''
*Mazinkaiser → Mazinger Z (Kouji)
*Shin Getter Robo → Getter Robo G (Ryoma, Hayato, Benkei) 
*Dancouga (Shinobu, Sara, Masato, Ryo)

|'''Victory Condition:'''
*1st Part: Sigu is defeated, Vesalius is defeated
*2nd Part: Defeat all enemies 
'''Defeat Condition:'''
*1st Part: Any ally is defeated
*2nd Part: Any ally is defeated 
'''Skill Point:''' Accomplish either objective in 4 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Clop Class Battleship (Federation Officer)
*Wing Gundam Zero Kai (Heero)
*Gundam Deathscythe Hell Kai (Duo)
*Gundam Sandrock Kai (Quatre)
*Taurus (Hilde)
*Strike Gundam (Kira)

|'''Victory Condition:''' (1) AS Soleares reaches the designated point in 4 turns; (2) Defeat all enemies '''Defeat Condition:''' (1) Begin turn 5 without meeting victory conditions, Any ally is defeated; (2) Any ally is defeated '''Skill Point:''' Defeat all enemies in 4 turns and get the AS Soleares to the target square '''Secret Requirements:''' '''Unit Acquisition:'''
*CGUE (Rau)
*GINN (ZAFT Soldier) x 2
*Vesarius (Ades)

|-
| class="fc-route1" |'''第７話：燃えろ宙！妖花フローラの挑戦 Scenario 7 - Space Burns! The Enchanting Flora’s Challenge!'''
| class="fc-route2" |'''第７話：怒りの獣、野生の咆哮 Scenario 7 - The Wild Roar of the Raging Beast'''
| class="fc-route3" |'''第７話：崩壊の大地 Scenario 7 - Collapsing Land'''
| class="fc-route4" |'''第７話：ワンズ・ジャスティス Scenario 7 - One’s Own Justice'''

|-
|'''Victory Condition:''' 
*1st Part: Defeat all enemies
*2nd Part: Defeat all enemies
'''Defeat Condition:''' 
*1st Part: Any ally defeated
*2nd Part: Any ally defeated
'''Skill Point:''' Defeat all enemies in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*AnRyu (AnRyu)
*KouRyu (KouRyu)

|'''Victory Condition:''' (1) Defeat all enemies; (2) Defeat Dangel '''Defeat Condition:''' Any ally is defeated '''Skill Point:''' Defeat all Zubanzas, Boazan Flying Saucers, and Red Baloms within 4 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Black Wing (Alan)

|'''Victory Condition:''' (1) Defeat all enemies; (2) Archangel reaches the designated point, Defeat all enemies '''Defeat Condition:''' (1) Mwu is defeated; (2) Ally battleship is defeated, Kira or Mwu are defeated '''Skill Point:''' Defeat all enemies in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Strike Gundam (Kira)
*Archangel (Murrue, Natarle)
*Aile, Sword and Launcher Striker packs for Strike Gundam

|'''Victory Condition:''' Any ally reaches the designated point '''Defeat Condition:''' Any ally is defeated '''Skill Point:''' Defeat all enemies in 5 turns and get an allied unit to the target square '''Secret Requirements:''' '''Unit Acquisition:'''
*Altron Gundam (Wufei)
*Gundam Heavyarms Kai (Trowa)
*CGuE (Rau)
*Vesarius (Ades)
*Aegis Gundam (Athrun)
*Blitz Gundam (Nicol)
*Buster Gundam (Dearka)
*Duel Gundam (Yzak)

|-
| class="fc-route1" |'''第８話：立ち上がれ！勇気ある者達 Scenario 8 - Stand Up, People of Courage!'''
| class="fc-route2" |'''第８話：輝け！不死身の勇者 Scenario 8 - Shine, Undying Hero!'''
| class="fc-route3" |'''第８話：誘う声 Scenario 8 - An Inviting Voice'''
| class="fc-route4" |'''第８話：インビジブル・イントルーダー Scenario 8 - Invisible Intruder'''

|-
|'''Victory Condition:''' (1) Defeat all enemies; (2) ZX-02 is defeated '''Defeat Condition:''' (1) Any ally is defeated; (2) Gai is defeated, J is defeated '''Skill Point:''' Defeat all enemies in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*GaiGar → GaoGaiGar
*Mic Sounders XIII gains "Disc P", "Disc M", and "Disc X" attacks
*Goldymarg (Goldymarg)
*HyoRyu (HyoRyu)
*EnRyu (EnRyu)
*Big Volfogg (Big Volfogg)

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' (1) Any ally is defeated; (2) Akira is defeated '''Skill Point:''' Defeat the Bramble (retreats at 4000HP (E) / 6000HP (N) / 8000HP (H)) '''Secret Requirements:''' '''Unit Acquisition:'''
*Raideen (Akira)
*Bluegar (Jinguji, Mari)

|'''Victory Condition:'''
*1st Part: (1) Vesalius is defeated; (2) Defeat all enemies
*2nd Part: (1) Defeat all enemies; (2) Defeat all enemies except Valk Baal 
'''Defeat Condition:'''
*1st Part: Ally battleship is defeated, Seolla or Cobray are defeated
*2nd Part: Any ally is defeated 
'''Skill Point:''' Defeat Aegis, Duel, Buster, and Blitz Gundams in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Zeta Gundam (Kamille)
*Re-GZ BWS (Four)
*Methuss (Fa)
*Super Gundam (Emma)
*Ra Cailum (Bright, Torres)
*MP Nu Gundam (Cobray)
*Werkbau (Cobray)
*G Defensor parts for Gundam Mk-II

|'''Victory Condition:''' Reach turn 6 '''Defeat Condition:''' Any ally is defeated '''Skill Point:''' Defeat all the Jegans '''Secret Requirements:''' '''Unit Acquisition:'''
*CGuE (Rau)
*Vesarius (Ades)
*Aegis Gundam (Athrun)
*Blitz Gundam (Nicol)
*Buster Gundam (Dearka)
*Duel Gundam (Yzak)

|-
| class="fc-route1" |'''第９話：内なる修羅 Scenario 9 - Demons of War Within'''
| class="fc-route2" |'''第９話：再会！ニューヨーク解放戦 Scenario 9 - Reunion! The Battle to Retake New York'''
| class="fc-route3" |'''第９話：正義の在処 Scenario 9 - Where Justice Can Be Found'''
| class="fc-route4" |'''第９話：アベンジャー Scenario 9 - Avenger'''

|-
|'''Victory Condition:''' (1) Defeat all enemies; (2) Defeat Raioh '''Defeat Condition:''' (1) Any ally defeated; (2) Sanger is defeated '''Skill Point:''' Defeat the Bramble in 4 turns (retreats at 4000HP (E) / 6000HP (N) / 8000HP (H)) '''Secret Requirements:''' '''Unit Acquisition:'''
*Dygenguar (Sanger)
*Huckebein Mk-III Trombe (Ratsel)
*Raideen (Akira)
*Bluegar (Jingunji, Mari)
*Mazinger Z (Kouji)
**Mazinger Z (Kouji) and Great Mazinger (Tetsuya) gain the "Double Mazinger Blade" and "Double Burning Fire" combination attacks
*Diana A (Sayaka)
*Getter Robo G (Ryoma, Hayato, Benkei)
*Lady Command (Michiru)
*Combattler V (Hyoma, Juzo, Daisaku, Chizuru, Kosuke)

|'''Victory Condition:''' (1) Defeat all enemies; (2) Dancouga reaches the designated point; (3) Defeated Deathgaia, Dangel, and Warchamedes '''Defeat Condition:''' (1) Shinobu, Kusuha, or Bullet are defeated; (2) Shinobu, Kusuha, Bullet, or Alan are defeated; (3) Alan is defeated '''Skill Point:''' Clear the map in 8 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Black Wing (Alan)
*Dygenguar (Sanger)
*Huckebein Mk-III Trombe (Ratsel)

|'''Victory Condition:''' (1) Vesalius is defeated; Reduce the Muge Battleship under 2000 HP before it reaches the edge of the map '''Defeat Condition:''' (1) Ally battleship is defeated; (2) Muge Battleship reaches the western edge of the map '''Skill Point:''' Defeat all enemies before reducing the Muge Mothership's HP below 2000 or defeating it '''Secret Requirements:''' '''Unit Acquisition:'''

|'''Victory Condition:''' (1) Reduce the Archangel's HP to 50% or less, Defeat all enemies besides the Archangel; (2) Reduce the Varuch Ishar to 4000 HP or less. '''Defeat Condition:''' Any ally is defeated '''Skill Point:''' Defeat the Varuch Ishar (flees at 4000 HP) '''Secret Requirements:''' '''Unit Acquisition:'''
*CGuE (Rau)
*Vesarius (Ades)
*Aegis Gundam (Athrun)
*Blitz Gundam (Nicol)
*Buster Gundam (Dearka)
*Duel Gundam (Yzak)

|-
| class="fc-route1" |'''第１０話：激震の地底帝国 Scenario 10 - Tremors in the Underground Empire'''
| class="fc-route2" |'''第１０話：龍を喰らうもの Scenario 10 - That Which Devours the Dragon'''
| class="fc-route3" |'''第１０話：消えていく光 Scenario 10 - The Fading Light'''
| class="fc-route4" |'''第１０話：グッバイ・フレンズ Scenario 10 - Goodbye, Friends'''

|-
|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' All allies defeated, Science Fortress Lab destroyed '''Skill Point:''' Clear the map without the Science Fortress Lab taking damage '''Secret Requirements:''' '''Unit Acquisition:'''
*Raioh loses the "System LIOH" ability
*Raioh gains the "Rising Meteor" attack
*Dygenguar (Sanger)
*Huckebein Mk-III Trombe (Ratsel)

|'''Victory Condition:''' (1) Sanger is defeated; (2)(3) Defeat all enemies; (4)(5) ZX-02 is defeated '''Defeat Condition:''' (1) Bullet is defeated; (2) Sanger or Rastel are defeated; (3) Any ally is defeated; (4) Guy, Sanger, or Rastel are defeated; (5) Guy, J, Sanger, or Rastel are defeated '''Skill Point:''' Reduce Shin RyuOuKi to below 10000 HP within 3 turns of its arrival '''Secret Requirements:''' '''Unit Acquisition:'''
*Dygenguar (Sanger)
*Huckebein Mk-III Trombe (Ratsel)
*GaiGar (Guy)
*GaoGaiGar (Guy)
*Mic Sounders XIII (Mic Sounders XIII)
*Goldymarg (Goldymarg)
*HyoRyu (HyoRyu)
*EnRyu (Enryu)
*Volfogg (Volfogg)
*Great Mazinger (Tetsuya)
*Venus A (Jun)
*Boss Borot (Boss, Mucha, Nuke)
*Kotetsu Jeeg (Jeeg)
*Big Shooter (Miwa)
*Stealth Gao II parts for GaoGaiGar
*Gunbot parts for Volfogg

|'''Victory Condition:''' (1) Reduce the Blitz Gundam to under 7000HP; (2) The Gamow is defeated; (3) The Gamow is defeated and Imperial Guard are defeated '''Defeat Condition:''' (1)(2) Any ally is defeated; (3) Ally battleship is defeated '''Skill Point:''' Defeat the Gamow (retreats at 4000HP (E) / 6000HP (N) / 8000HP (H)) '''Secret Requirements:''' '''Unit Acquisition:'''
*Qubeley Mk-II (Puru)
*Qubeley Mk-II (Puru Two)
*Hyaku Shiki (Beecha)
*Gundam Mk-II (Elle)
*Jegan (Mondo)
*Megarider (Iino)
*YF-19 (Isamu)
*YF-21 (Guld)

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' (1) Any ally is defeated; (2) Ally battleship is defeated; (3) Ally battleship is defeated, Isamu or Guld are defeated '''Skill Point:''' Clear the map in 6 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Zeta Gundam (Kamille)
*Methuss (Fa)
*ReGZ (Four)
*Super Gundam (Emma)
*Archangel (Murrue, Natarle)
*Strike Gundam (Kira)
*Moebius Zero (Mwu)
*Aile, Sword, and Launcher Striker packs for Strike Gundam
*Wing Gundam Zero Kai (Heero)
*Gundam Sandrock Kai (Quatre)
*Gundam Deathscythe Hell Kai (Duo)
*Taurus (Hilde)
*ZZ Gundam (Judau)
*ReGZ BWS (Roux)
*Qubeley Mk-II (Puru)
*Qubeley Mk-II (Puru Two)
*Hyaku Shiki (Beecha)
*Gundam Mk-II (Elle)
*Jegan (Mondo)
*Megarider (Iino)
*YF-19 (Isamu)
*YF-21 (Guld)

|-
| class="fc-route1" |'''第１１話：戦場の邂合、そして決別 Scenario 11 - An Battlefield Encounter, and Then a Departure'''
| class="fc-route2" |'''第１１話：新たなる人類 Scenario 11 - A New Mankind'''
| class="fc-route3" |'''第１１話：君と戦場で Scenario 11 - On the Battlefield with You'''
| class="fc-route4" |'''第１１話：パワー・ジャンクション Scenario 11 - Power Junction'''

|-
|'''Victory Condition:''' (1) Defeat all enemies; (2) Defeat Vesalius '''Defeat Condition:''' Ally battleship is defeated, Kira or Mwu are defeated '''Skill Point:''' Defeat all enemies in 7 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Archangel (Murrue, Natarle)
*Strike Gundam (Kira)
*Moebius Zero (Mwu)
*Stealth Gao II Parts for GaoGaiGar
*Aile, Sword, and Launcher Striker packs for Strike Gundam

|'''Victory Condition:''' (1) Defeat all enemies; (2) Vesalius is defeated '''Defeat Condition:''' (1) Ally battleship is defeated, Kira or Mwu are defeated; (2) Ally battleship is defeated '''Skill Point:''' Defeat all enemies in 7 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Strike Gundam (Kira)
*Moebius Zero (Mwu)
*Archangel (Murrue, Natarle)
*YF-19 (Isamu)
*YF-21 (Guld)
*Aile, Sword, and Launcher Striker packs for Strike Gundam

|'''Victory Condition:''' (1) Defeat all enemies (2) ZX-02 is defeated '''Defeat Condition:''' (1) Kira is defeated; (2) Any ally is defeated '''Skill Point:''' Defeat all enemies in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Wildburger (Arado)
*Great Mazinger (Tetsuya)
*Venus A (Jun)
*Boss Borot (Boss)
*Dancouga (Shinobu, Sarah, Masato, Ryo)
*Raideen (Akira)
*Bluegar (Jingunji)
*Mazinger Z (Kouji)
*Diana A (Sayaka)
*Getter Robo G (Ryoma, Hayato, Benkei)
*Lady Command (Michiru)
*Star Gaogaigar (Gai)
*Goldymarg (Goldymarg)
*Mic Sounders the 13th (Mic)
*Hyoryu (Hyoryu)
*Enryu (Enryu
*Big Volfogg (Volfogg)

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Defeat all enemies in 7 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Ra Cailum (Bright, Torres)
*Great Mazinger (Tetsuya)
*Venus A (Jun)
*Boss Borot (Boss)
*Dancouga (Shinobu, Sarah, Masato, Ryo)
*Raideen (Akira)
*Bluegar (Jingunji)
*Mazinger Z (Kouji)
*Diana A (Sayaka)
*Getter Robo G (Ryoma, Hayato, Benkei)
*Lady Command (Michiru)
*Star Gaogaigar (Gai)
*Goldymarg (Goldymarg)
*Mic Sounders the 13th (Mic)
*Hyoryu (Hyoryu)
*Enryu (Enryu
*Big Volfogg (Volfogg)

|-
| class="fc-route1" |'''第１２話：守るべきモノ Scenario 12 - What You Must Protect'''
| class="fc-route2" |'''第１２話：別れの宇宙 Scenario 12 - Farewells in Space'''
| class="fc-route3" |'''第１２話：ディーンの火 Scenario 12 - The Flames of Deen'''
| class="fc-route4" |'''第１２話：コンクルージョン Scenario 12 - Conclusion'''

|-
|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' All enemies defeated '''Skill Point:''' Defeat all enemies in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Gundam Wing Zero (Heero)
*Gundam Deathscythe Hell Kai (Duo)
*Gundam Sandrock Kai (Quatre)
*Gundam Heavyarms Kai (Trowa)
*Altron Gundam (Wufei)
*Taurus (Hilde)
*Zeta Gundam (Kamille)
*Re-GZ BWS (Four)
*Methuss (Fa)
*Gundam Mk-II (Emma)
*ZZ Gundam (Judau)
*Qubeley Mk-II (Puru)
*Qubeley Mk-II (Puru Two)
*Hyaku Shiki (Beecha)
*Gundam Mk-II (Elle)
*Jegan (Mondo)
*Megarider (Iino)
*YF-19 (Isamu) (After stage)
*YF-21 (Guld) (After stage)
*G Defensor parts for Gundam Mk-II

|'''Victory Condition:''' (1) Defeat all enemies; (2) Defeat Shin RyoOhKi; (3) Defeat the Imperial Guard '''Defeat Condition:''' (1)(2) Any ally is defeated; (3) Ally battleship is defeated '''Skill Point:''' Defeat Shin RyuOhKi before Victory Conditions are met '''Secret Requirements:''' '''Unit Acquisition:'''
*Gundam Wing Zero Kai (Heero)
*Gundam Deathscythe Hell Kai (Duo)
*Gundam Sandrock Kai (Quatre)
*Gundam Heavyarms Kai (Trowa)
*Altron Gundam (Wufei)
*Taurus (Hilde)
*Zeta Gundam (Kamille)
*Re-GZ BWS (Four)
*Methuss (Fa)
*Gundam Mk-II (Emma)
*ZZ Gundam (Judau)
*Qubeley Mk-II (Puru)
*Qubeley Mk-II (Puru Two)
*Hyaku Shiki (Beecha)
*Gundam Mk-II (Elle)
*Jegan (Mondo)
*Megarider (Iino)
*G Defensor parts for Gundam Mk-II

|'''Victory Condition:''' (1) Bramble, Magnum, and Zangaioh are defeated; (2) Defeat all enemies; (3) Defeat Valk Baal '''Defeat Condition:''' (1) Ally battleship is defeated, Arado is defeated; (2) Cobray, Arado or Seolla are defeated; (3) Cobray, Viletta, Sanger, or Rastel are defeated '''Skill Point:''' Clear the map in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Werkbau gains the "Axion Buster" attack
*Gundam Heavyarms Kai (Trowa)
*Altron Gundam (Wufei)
*Dygenguar (Sanger)
*Huckebein Mk-III Trombe (Ratsel)
*R-GUN Powered (Viletta)

|'''Victory Condition:''' (1)(2) ZX-08 is defeated; (3) Varuch Ishar is defeated '''Defeat Condition:''' (1) Ally battleship is defeated, (2) Ally battleship is defeated, J is defeated; (3) Ally battleships is defeated, Selena, Viletta, Sanger, or Rastel are defeated '''Skill Point:''' Defeat ZX-02 in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*J-ARK (J, Tomoro)
*R-GUN Powered (Viletta)
*Dygenguar (Sanger)
*Huckebein Mk-III Trombe (Ratsel)
*Vegalion (Slay)

|-
| colspan="4" class="fc-std-sc" |'''第１３話：もう一度、自らの足で Scenario 13 - Once Again, On Your Feet'''

|-
| colspan="4" |'''Victory Condition:''' ZX-06 is defeated '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Clear the map in 6 turns; Defeat all other enemies before ZX-06 '''Secret Requirements:''' '''Unit Acquisition:'''
*Evangelion Unit 0 Custom (Rei)
*Evangelion Unit 1 (Shinji)
*Evangelion Unit 2 (Asuka)

|-
| colspan="4" class="fc-std-sc" |'''第１４話：オペレーション・ハルパー Scenario 14 - Operation Harper'''

|-
| colspan="4" |'''Victory Condition:''' Reduce Hermoz Ehad's HP to below 120000HP (E) / 90000HP (N) / 80000HP (H) '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Achieve the victory condition in 7 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*HyoRyu (HyoRyu)
*EnRyu (EnRyu)

|-
| colspan="4" class="fc-std-sc" |'''第１５話：遥かなる凱歌 Scenario 15 - A Faroff Victory Song'''

|-
| colspan="4" |'''Victory Condition:''' Defeat the Combine Primeval '''Defeat Condition:''' Ally Battleship is defeated, J is defeated '''Skill Point:''' Defeat all enemies in 7 turns, leaving the combined Primeval for last '''Secret Requirements:''' '''Unit Acquisition:'''
*J-Ark (J, Tomoro)
*ALL units are unavailable until clearing Scenario 18

|-
| colspan="4" class="fc-std-sc" |'''第１６話：導かれる魂、銀河で Scenario 16 - Souls Guided by the Galaxy'''

|-
| colspan="4" |'''Victory Condition:'''
*1st Part: Defeat all enemies
*2nd Part: Defeat all enemies
'''Defeat Condition:'''
*1st Part: Ideon is defeated
*2nd Part: Any ally is defeated
'''Skill Point:''' Defeat all enemies in 4 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Ideon (Cosmo, Kasha, Bess → Moera)
*VF-17S Nightmare (Kinryu)
*VF-17D Nightmare (Gamlin)
*VF-17D Nightmare (Docker)
*Battle 7 (Max, Exedore, Miho, Sally)
*Soloship (Bess)

|-
| colspan="4" class="fc-std-sc" |'''第１７話：ディスコード・ハーモニー Scenario 17 - Discord / Harmony'''

|-
| colspan="4" |'''Victory Condition:''' (1)(2) Defeat the Zig Mac; (3) Defeat FZ-109F Elgarthorn '''Defeat Condition:''' (1) Any ally is defeated; (2) Any ally is defeated, Zig Mac moves next to the Soloship (3) '''Skill Point:''' Meet victory the condition in 4 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Battle 7 can now transform into "Enhanced Attack Mode"
*VF-17D Nightmare (Docker)

|-
| colspan="4" class="fc-std-sc" |'''第１８話：銀河流浪 Scenario 18 - Galactic Wandering'''

|-
| colspan="4" |'''Victory Condition:'''
*1st Part: Defeat FZ-109F Elgarthorn
*2nd Part: Defeat Zig Mac
'''Defeat Condition:'''
*1st Part: Any ally is defeated
*2nd Part: Any ally is defeated
'''Skill Point:''' Meet victory conditions in 3 turns '''Secret Requirements:'''
*Duel Gundam
**Take the Earth Route
*VF-1J S Valkyrie
**Take the Earth Route
*LaGOWE
**Take the Earth Route
'''Unit Acquisition:'''
*VF-17D Nightmare (Physica)
*VF-17S (Kinryu), VF-17D (Gamlin), and VF-17D (Physica) gain the "Diamond Force Attack" combination Attack
*Ideon gains the "Omnidirectional Missile" attack
*All Ideon and Macross 7 units are lost <ul><li>Ideon (Cosmo, Kasha, Moera)</li><li>Soloship (Bess)</li><li>Battle 7 (Max, Exedore, Miho, Sally)</li><li>VF-17S Nightmare (Kinryu)</li><li>VF-17D Nightmare (Physica)</li><li>VF-17D Nightmare (Gamlin)</li>

|}
 

==Stages 19 - 33==
{| width="100%"
|- class="fc-route-h"
| width="50%" |'''Descend to Earth''' Gundam 0083 Gundam Z ZZ Gundam Char's CounterAttack Gundam Wing Gundam SEED Macross 7 Macross Plus Evangelion
| width="50%" |'''Mount a Lunar offensive''' GaoGaiGar Ideon Mazinger (Z, Great) Getter Robo Steel Jeeg Combattler V Gaiking Raideen Dancouga GoShogun

|-
| class="fc-route1" |'''第１９話：宇宙に降る星 Scenario 19 - Stars Falling in Space'''
| class="fc-route3" |'''第１９話：悪夢への招待状 Scenario 19 - A Written Invitation to a Nightmare'''

|-
|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated, Kira is defeated '''Skill Point:''' Destroy all enemies in 6 turns '''Secret Requirements:'''
*Duel Gundam
**Destroy Yzak.
'''Unit Acquisition:'''
*Nu Gundam (Amuro)
*Jegan (Katz)
*MP Nu Gundam (Kayra)
*Incom and Fin Funnel parts for MP Nu Gundam
*Kira unlocks the SEED pilot skill
*Skygrasper
*Ra Cailum (Bright, Torres)

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Destroy the Muge battleship in 6 turns (retreats at 6000HP (E) / 8000HP (N) / 10000 HP (H)) '''Secret Requirements:''' 
'''Unit Acquisition:'''
*Daiku Maryu (Pete, Midori)
*Gaiking (Sanshiro)
*Skylar (Fan Li)
*Bazolar (Yamagatake)
*Nesser (Bunta)

|-
| class="fc-route1" |'''第２０話：強襲、砂漠の虎 Scenario 20 - Assault of the Desert Tiger'''
| class="fc-route3" |'''第２０話：異邦人達の帰還 Scenario 20 - The Foreigners Return'''

|-
|'''Victory Condition:''' Defeat the Lesseps '''Defeat Condition:''' Ally battleship is defeated, Kira is defeated '''Skill Point:''' Defeat the Lesseps in 6 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Kira unlocks the SEED pilot skill
*Albion (Synapse, Paserov)
*Gundam Stamen (Kou)
*GM Cannon II (Keith)
*GM Custom (Burning)
*GM Custom (Bate)
*GM Custom (Monsha)
*GM Cannon II (Adel)
*Gundam GP01fb
*Armed Base Orchis parts for Gundam Stamen

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Destroy Helmut's Muge battleship in 4 turns (retreats at 6000HP (E) / 8000HP (N) / 10000 HP(H)) '''Secret Requirements:''' '''Unit Acquisition:'''
*Ideon (Cosmo, Kasha, Moera)
*Ideon gains the "Ideon Sword" and "Ideon Sword (MAP)" attacks
*Soloship (Bess, Hatari)

|-
| class="fc-route1" |'''第２１話：プリティ・デビル Scenario 21 - Pretty Devil'''
| class="fc-route3" |'''第２１話：裏切りの代償 Scenario 21 - The Cost of Betrayal'''

|-
|'''Victory Condition:'''
*1st Part: Gigil's ship is defeated
*2nd Part: Gigil's ship is defeated 
'''Defeat Condition:'''
*1st Part: Any ally is defeated
*2nd Part: Basara is defeated
'''Skill Point:''' Destroy Gigil before he moves adjacent to Sivil '''Secret Requirements:'''
*LaGOWE
**Waltfeld and Dacosta must both survive and get a combined total of 10 kills or more on the first half of the scenario.
*VF-1J
**Milia must get a total of 10 kills in the first half of the scenario.
'''Unit Acquisition:'''
*VF-17S Nightmare (Kinryu)
*VF-17D Nightmare (Gamlin)
*VF-17D Nightmare (Physica)
*VF-1J S Valkyrie (Milia)
*LaGOWE (Waldfelt)
*BuCUE (Dacosta)
*Skygrasper (Cagalli)
*VF-19 Kai Fire Valkyrie (Basara)
*VF-17S Nighmare (Milia)
*VF-1J S Valkyrie

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Any ally is defeated '''Skill Point:''' Destroy all enemies in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Goshogun (Shingo, Killy, Remi)
*Good Thunder (Sabranth)

|-
| class="fc-route1" |'''第２２話：砂塵の果て Scenario 22 - Beyond the Clouds of Sand'''
| class="fc-route3" |'''第２２話：発動する力、無限大 Scenario 22 - Infinite Activation Power'''

|-
|'''Victory Condition:''' (1) Defeat the Lesseps; (2) Waltfeld is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated '''Skill Point:''' Defeat the Lesseps in 5 turns '''Secret Requirements:'''
*LaGOWE
**Kira must destroy Waltfeld's LaGOWE while in SEED. (Kira has to activate SEED mode before the event that ends the stage.)
'''Unit Acquisition:'''
*Kira unlocks the SEED pilot skill

|'''Victory Condition:''' (1) Soloship reaches the computer facility; (2) Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Get the Soloship to the indicated area in 4 turns without it taking any damage '''Secret Requirements:''' '''Unit Acquisition:'''
*HyoRyu (HyoRyu)
*EnRyu (EnRyu)

|-
| class="fc-route1" |'''第２３話：エモーション・ハイ Scenario 23 - Emotion High'''
| class="fc-route3" |'''第２３話：決戦！地獄の月荒野 Scenario 23 - Decisive Battle in the Hellish Lunar Wilderness!'''

|-
|'''Victory Condition:''' (1) Defeat 2 Ghosts; (2) Defeat all enemies; (3) Basara sings to Sivil, All ZAFT forces are defeated '''Defeat Condition:''' (1) Ally battleship is defeated, Battle 7 is defeated; (2) Ally battleship is defeated, Battle 7 is defeated, Isamu or Guld are defeated; (3) Ally battleship is defeated, Isamu, Guld, or Basara are defeated '''Skill Point:''' Clear the map in 9 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*YF-19's "Full Volley" attacks gains +200 Attack power
*YF-19 and YF-21 gain the "Double Pinpoint Barrier Punch" combination attack
*Battle 7 (Max, Exedore, Miho, Sally)
*VF-19 Kai Fire Valkyrie (Basara)
*Mazinkaiser
*Shin Getter Robo

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Clear the map in 9 turns '''Secret Requirements:''' '''Unit Acquisition:'''

|-
| colspan="2" class="fc-std-sc" |'''第２４話：戦神の星で Scenario 24 - On the Planet of the War God'''

|-
| colspan="2" |'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' (1) Any ally is defeated; (2) Ally battleship is defeated '''Skill Point:''' Destroy all enemies in 3 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*VF-19 Kai Fire Valkyrie (Basara)
*VF-11 MAXL Kai (Mylene)
*VF-17 Kai Nightmare (Ray, Veffidas)
*Tallgeese III (Zechs)
*Taurus (Noin)
*Voltes V (Kenichi, Ippei, Daijiroh, Hiyoshi, Megumi)
*Daimos (Kazuya)
*Garuba FX-II (Kyoshiro, Nana)

|-
| colspan="2" class="fc-std-sc" |'''第２５話：選ばれし者、選びし者 Scenario 25 - Those Who Are Chosen, Those Who Choose'''

|-
| colspan="2" |'''Victory Condition:''' (1) Hermos is defeated; (2) Zifrud is defeated '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Clear the map in 8 turns '''Secret Requirements:''' '''Unit Acquisition:'''

|-
| colspan="2" class="fc-std-sc" |'''第２６話：かりそめの旅人 Scenario 26 - Transitory Traveler'''

|-
| colspan="2" |'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated, Temjin, Fei Yen, or Apharmd are defeated '''Skill Point:''' Destroy all enemies in 3 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Temjin 747J (Chief)
*Fei Yen the Knight (Fei)
*Apharmd The Hatter (The Hatter)

|-
| colspan="2" class="fc-std-sc" |'''第２７話：勇気ある者達の誓い Scenario 27 - The Oath of the Courageous'''

|-
| colspan="2" |'''Victory Condition:'''
*1st Part: Defeat all enemies
*2nd Part: (1) Defeat all enemies; (2) Defeat the Z-Master within (10 (E) / 7 (N) / 5 (H)) turns 
'''Defeat Condition:'''
*1st Part: Ally battleship is defeated, Gai is defeated
*2nd Part: (1) Ally battleship is defeated, Gai or J are defeated; (2) (10 (E) / 7 (N) / 5 (H)) turns have passed, Ally battleship is defeated, Gai or J are defeated 
'''Skill Point:''' Destroy all enemies in 7 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*J-Ark (J, Tomoro)

|-
| colspan="2" class="fc-std-sc" |'''第２８話：いつか星の海へ Scenario 28 - Someday, In the Sea of Stars'''

|-
| colspan="2" |'''Victory Condition:''' (1)(2) Defeat the Zonder Robo; (3) Defeat the Zonder Robo within 6 attacks from Star GaoGaiGar; (4)(5) Defeat all enemies '''Defeat Condition:''' (1) Galeon is defeated; (2) Ally battleship is defeated, Galeon is defeated; (3) Ally battleship or Gai are defeated, Zonder Robo is not defeated within 6 attacks from Star GaoGaiGar (4) Main Character is defeated; (5) Ally battleship is defeated '''Skill Point:''' Destroy the Zonuder Robo in 5 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Galeon (Galeon)
*Star GaoGaiGar/GaoGaiGar (Gai)
*YF-19 (Isamu)
*YF-21 (Guld)
*Battle 7 (Max)
*VF-17S Nightmare (Milia)
*VF-17D Nightmare (Gamlin)
*VF-17D Nightmare (Physica)
*VF-19 Kai Fire Valkyrie (Basara)
*VF-11 MAXL Kai (Mylene)
*VF-17 Kai Nightmare (Ray, Veffidas)
*HyoRyu (HyoRyu)
*EnRyu (EnRyu)
*Goldymarg (Goldymarg)
*Volfogg (Volfogg)
*Mic Sounders XIII (Mic Sounder XIII)
*Ideon (Cosmo, Kasha, Moera)
*Soloship (Bess, Hatari)
*Star GaoGaiGar (Guy, Choryujin, Goldymarg, Mic, Volfogg)
*Dygenguar (Sanger)
*Aussenseiter (Ratsel)
*R-Blade Custom (Ryusei)
*R-Gun Powered (Viletta)

|-
| colspan="2" class="fc-std-sc" |'''第２９話：押された烙印 Scenario 29 - Branded with the Mark'''

|-
| colspan="2" |'''Victory Condition:''' (1)(2) Defeat all enemies '''Defeat Condition:''' (1) Ally battleship is defeated; (2) Ally battleship is defeated, Cagalli is defeated '''Skill Point:''' Destroy all enemies in 6 turns '''Secret Requirements:'''
*Destroid Monster
**Take the Space Route
*FBz-99G
**Take the Space Route
*Strike Rouge IWSP
**Cagalli must have 30 or more kills by the end of this stage.
***Take the Alaska Route
*Duel Gundam
**Take the Alaska Route
'''Unit Acquisition:'''
*GaoFighGar (Guy)
*HyoRyu (HyoRyu)
*EnRyu (EnRyu)
*Goldymarg (Goldymarg)
*Volfogg (Volfogg)/Big Volfogg (Big Volfogg)
*Mic Sounders XIII (Mic Sounders XIII)
*AnRyu (AnRyu)
*KouRyu (KouRyu)
*Ra Cailum (Bright, Torres)

|- class="fc-route-h"
|'''Head to Alaska''' Gundam (0083, Z, ZZ, CCA, Wing, SEED) Daitarn 3 Mazinger (Z, Great) Steel Jeeg Voltes V Daimos Dancouga Evangelion
|'''Go to Space''' GaoGaiGar Ideon Getter Robo Combattler V GaiKing Raideen Goshogun Macross (DYRL, 7, Plus) Virtual On

|-
| class="fc-route2" |'''第３０話：終わらない閃光 Scenario 30 - Unending Flashes of Light'''
| class="fc-route4" |'''第３０話：ロスト・ディーヴァ Scenario 30 - Lost Diva'''

|-
|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated, Kira is defeated '''Skill Point:''' Clear the map in 7 turns '''Secret Requirements:'''
*Strike Rouge IWSP
**Mwu must defeat Dearka
**After the event, Kira must defeat Athrun while both are in SEED.
'''Unit Acquisition:'''
*Skygrasper (Cagalli)
*Strike Gundam (Kira)
*Kira unlocks the SEED pilot skill
*Cagalli unlocks the SEED pilot skill (needs verification)
*Archangel loses Natarle as a subpilot

|'''Victory Condition:''' (1)(2) Defeat all enemies '''Defeat Condition:''' (1) Any ally is defeated: (2) Ally battleship is defeated, Fire Bomber, Diamond Force, or Skull Squadron are defeated '''Skill Point:''' In 6 turns, destroy Glavil and Gavil. You must destroy Glavil before Gavil '''Secret Requirements:'''
*Gavil and FBz-99G Zaubergeran
**Gamlin must defeat Gavil
'''Unit Acquisition:'''
*YF-19 (Isamu) (Before Deploying)
*YF-21 (Guld) (Before Deploying)
*VF-1S S Valkyrie (Focker)
*VF-1S S Valkyrie (Hikaru)
*VF-1A S Valkyrie (Kakizaki)
*VF-17D Nightmare (Gamlin)
*VF-17D Nightmare (Physica)
*VF-19 Kai Fire Valkyrie (Basara)
*VF-11 MAXL Kai (Mylene)
*VF-17 Kai Nightmare (Ray, Veffidas)

|-
| class="fc-route2" |'''第３１話：青き清浄なる世界のために Scenario 31 - For Our Blue & Pure World'''
| class="fc-route4" |'''第３１話：禁断の惑星へ Scenario 31 - To the Forbidden Planet'''

|-
|'''Victory Condition:''' (1) Defeat all enemies; (2)(3) Defeat all Mobile Dolls, All ZAFT Units retreat '''Defeat Condition:''' (1)(2) Ally battleship is defeated, Heero is defeated; (3) Ally battleship is defeated '''Skill Point:''' Do not let a single ZAFT machine get shot down '''Secret Requirements:'''
*Duel Gundam
**Yzak must survive the scenario.
'''Unit Acquisition:'''
*Archangel gains Newman as a subpilot
*Freedom Gundam (Kira)
*Daitarn 3 (Banjo)
*Black Wing (Alan)

|'''Victory Condition:'''
*1st Part: Defeat all enemies
*2nd Part: Defeat Gepelnitch
'''Defeat Condition:'''
*1st Part: Any ally is defeated
*2nd Part: Ally battleship is defeated, Basara or Gamlin are defeated
'''Skill Point:''' In 7 turns, destroy Glavil and Gavil and make Gepelnitch's ship retreat (at 50,000 HP) '''Secret Requirements:'''
*Destroid Monster
**Get the Skill Point on this stage.
*Gavil and FBz-99G Zaubergeran
**Gamlin must defeat Gavil 
'''Unit Acquisition:'''
*Destroid Monster

|-
| class="fc-route2" |'''第３２話：守護神の巫女 Scenario 32 - Priestess of the Guardian God'''
| class="fc-route4" |'''第３２話：インフィニティ・ソウル Scenario 32 - Infinity Soul'''

|-
|'''Victory Condition:''' (1)(2) Defeat all enemies '''Defeat Condition:''' Any Ally is defeated; Ally battleship is defeated, Sanger or Rastel are defeated '''Skill Point:''' In 5 turns, destroy the General of Hell or Flora. '''Secret Requirements:''' '''Unit Acquisition:'''
*Dygenguar (Sanger)
*Assenseiter (Ratsel)

|'''Victory Condition:''' (1) Valgo is defeated; (2)(3) Defeat all enemies '''Defeat Condition:''' (1) Mylene, Ray, or Gamlin are defeated; (2) Basara, Mylene, Ray, or Gamlin are defeated; (3) Ideon is defeated '''Skill Point:''' In 6 turns, destroy Valgo '''Secret Requirements:'''
*Gavil and FBz-99G Zaubergeran
**Gamlin must defeat Gavil 
'''Unit Acquisition:'''
*VF-17D Nightmare → VF-17S Nightmare (Gamlin)
*VF-17D Nightmare (Docker)
**VF-17S (Gamlin), VF-17D (Physica) and VF-17D (Docker) gain the "Diamond Force Attack" combination attack
*VF-19 Kai Fire Valkyrie, VF-11 MAXL Kai, and VF-17 Kai Nightmare gain the "Sound Booster" mech ability
**All VF-19 Kai Fire Valkyrie SB Songs gain (MAP) and (ALL) combination attack variants when Sound Booster activates.
**All VF-11 MAXL Kai SB Songs gain (MAP) and (ALL) combination attack variants when Sound Booster activates.
*Ideon (Cosmo, Kasha, Moera)
** Ideon gains the "Ideon Sword" and "Ideon Sword (MAP)" attacks when IDE gauge is full, and HP is below 30%
*Soloship (Bess, Hatari)

|-
| class="fc-route2" |'''第３３話：暁への脱出 Scenario 33 - Escape to Daybreak'''
| class="fc-route4" |'''第３３話：受け継ぎし遺産 Scenario 33 - The Successor's Inheritance'''

|-
|'''Victory Condition:''' (1)(2) Defeat all enemies besides the Albion '''Defeat Condition:''' (1) Ally battleship is defeated, Kira, Shinobu, or Alan are defeated, Albion is defeated; (2) Kira, Shinobu, Alan, Mwu, or Cagalli are defeated '''Skill Point:''' In 8 turns, destroy all enemies except the Albion '''Secret Requirements:''' '''Unit Acquisition:'''
*Strike Gundam (Mwu)
*Strike Rouge (Cagailli)
*M1 Astray (Juri)
*M1 Astray (Mayura)
*M1 Astray (Asagi)
*Justice Gundam (Athrun)
*Buster Gundam (Dearka)
*Mazinger Z gains the "Giant Swing Rocket Punch" attack
*Great Mazinger gains the "Great Booster" attack
*Koutetsu Jeeg stats are enhanced and can transform into Jeeg Panzeroid
*Dancouga and Black Wing can combine into Final Dancouga.

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated, Akira or Jinguji are defeated '''Skill Point:''' In 8 turns, destroy Etzira, Valgo, Glavil, Gabro Zan, and Gije '''Secret Requirements:''' '''Unit Acquisition:'''
*VF-1A S Valkyrie (Kakizaki)
*Raideen gains the Mutron Open mech ability
*Ideon (Cosmo, Kasha, Moera)
*Soloship (Bess, Hatari)
*Battle 7 (Max, Exedore, Miho, Sally)
*VF-1S S Valkyrie (Fokker)
*VF-1S S Valkyrie (Hikaru)
*VF-1A S Valkyrie (Kakizaki)
*YF-19 (Isamu)
*YF-21 (Guld)
*VF-19 Kai Fire Valkyrie (Basara)
*VF-11 MAXL Kai (Mylene)
*VF-17 Kai Nightmare (Ray, Veffidas)
*VF-17S Nightmare (Gamlin)
*VF-17D Nightmare (Physica)
*VF-17D Nightmare (Docker)

|}
 

==Stages 34 - 44==
{| width="100%"
|- class="fc-route-h"
| width="25%" |'''Touma Route'''
| width="25%" |'''Kusuha Route'''
| width="25%" |'''Cobray Route'''
| width="25%" |'''Selena Route'''

|-
| class="fc-route1" |'''第３４話：武人の心、その意味 Scenario 34 - Why a Warrior Fights'''
| class="fc-route2" |'''第３４話：怒りの強念者 Scenario 34 - The Wrath of a Esper'''
| class="fc-route3" |'''第３４話：虚ろな魂の捕囚 Scenario 34 - Captivity of the Hollow Soul'''
| class="fc-route4" |'''第３４話：ベトレイヤー Scenario 34 - Betrayer'''

|-
|'''Victory Condition:'''
*1st Part: (1)(2) Defeat all enemies
*2nd Part: Bemidoban is defeated 
'''Defeat Condition:'''
*1st Part: (1) Ally battleship is defeated; (2) Ally battleship is defeated, Touma is defeated
*2nd Part: Touma is defeated
'''Skill Point:''' Defeat all enemies within 6 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Raioh (Touma)
*Mazinger Z, Great Mazinger and Getter Dragon gain the "F Dynamic Special" combination attack

|'''Victory Condition:'''(1)(2) Shin RyuOhKi is defeated; (3)(4) Bemidoban and Shmuel are defeated '''Defeat Condition:''' (1) Any ally is defeated; (2) Kusuha is defeated; (3) Kusuha is defeated, Ally battleship is defeated; (4) Ally battleship is defeated '''Skill Point:''' Destroy the Bemidoban (retreats (8000 (E) / 10000 (N) / 12000 (H)) HP) '''Secret Requirements:''' '''Unit Acquisition:'''
*Mazinger Z, Great Mazinger and Getter Dragon gain the "F Dynamic Special" combination attack
*Dygenguar (Sanger)
*Aussenseiter (Ratsel)

|'''Victory Condition:''' Shin RyuOhKi is defeated '''Defeat Condition:''' Ally battleship is defeated, Cobray, Arad, or Seolla are defeated '''Skill Point:''' Defeat Shin RyuOuKi within 6 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Werkbau (Cobray)
*Mazinger Z, Great Mazinger and Getter Dragon gain the "F Dynamic Special" combination attack

|'''Victory Condition:''' (1) Shmuel is defeated; (2)(3) Bemidoban defeated Shin RyuOhKi '''Defeat Condition:''' (1) Selena is defeated; (2) Ally battleship is defeated, Selena is defeated; (3) Ally battleship is defeated '''Skill Point:''' Bemidoban and Shin RyuOuKi shot down. Both flee when below (8000 (E) / 10000 (N) / 12000 (H)) HP. '''Secret Requirements:''' '''Unit Acquisition:'''
*Mazinger Z, Great Mazinger and Getter Dragon gain the "F Dynamic Special" combination attack
*Alterion (CF) (Ibis, Tsugumi)
*AS Soleares (Selena, Elma) is unavailable during the intermission

|-
| class="fc-route1" |'''第３５話：闘志、誰がために Scenario 35 - For Whom the Fighting Spirit Burns'''
| class="fc-route2" |'''第３５話：魂、久遠に Scenario 35 - The Soul, Into Eternity'''
| class="fc-route3" |'''第３５話：THE GUN OF DIS Scenario 35 - THE GUN OF DIS'''
| class="fc-route4" |'''第３５話：クロージング・ハート Scenario 35 - Closing Heart'''

|-
|'''Victory Condition:''' (1)(2) Defeat all enemies '''Defeat Condition:''' (1) Touma is defeated; (2) Ally battleship is defeated, Touma, Sanger, or Rastel are defeated '''Skill Point:''' Defeat all enemies within 4 turns of allied reinforcements arriving. '''Secret Requirements:''' '''Unit Acquisition:'''
*DaiRaioh(Touma)
*Dygenguar (Sanger)
*Aussenseiter (Ratsel)

|'''Victory Condition:''' (1)(2)(3) Shin RyuOhKi is defeated '''Defeat Condition:''' (1) Kusuha or Bullet are defeated; (2) Kusuha is defeated; (3) Ally battleship is defeated, Kusuha is defeated '''Skill Point:''' Destroy Shin RyuOhKi within 6 turns of Varuch Ben and Ishar's arrival, destroying them first. '''Secret Requirements:''' '''Unit Acquisition:'''
*GouRyu Kai (Kusuha)
*Raiko Kai (Bullet)
*Shin RyuKoOh (Kusuha, Bullet)
*Dygenguar (Sanger)
*Aussenseiter (Ratsel)

|'''Victory Condition:''' (1)(2) Bemidoban or Shmuel are defeated; (3) ??? is defeated; (4) Valk Baal is defeated '''Defeat Condition:''' (1) Cobray is defeated, (2)(3)(4) Ally battleship is defeated, Cobray is defeated '''Skill Point:''' Defeat the Bemidoban within 5 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Varuch Ben (Cobray)
*Dis Astranagant (Cobray)

|'''Victory Condition:''' (1)(2) Defeat all enemies '''Defeat Condition:''' (1) Selena is defeated; (2) Ally battleship is defeated '''Skill Point:''' Map cleared within 7 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Eslim (Selena)
*Alterion (CF) replaces Tsugumi with Slay as a Subpilot

|-
| colspan="4" class="fc-std-sc" |'''第３６話：激突！勇者VS勇者！ Scenario 36 - Clash! Brave vs. Brave!'''

|-
| colspan="4" |'''Victory Condition:'''
*1st Part: Defeat all enemies
*2nd Part: Ally battleship is defeated
'''Defeat Condition:'''
*1st Part: Star GaoGaiGar is defeated
*2nd Part: Gai is defeated
'''Skill Point:''' Defeat all enemies within 6 turns. '''Secret Requirements:'''
*EVA-01 F-Type Equipment
**Shinji must defeat Ramiel on the first part of this scenario.
*Early Nu Gundam HWS
**Amuro must have 60 or more kills by the end of the scenario.
*GP-02A
**Burning, Monsha, Bate, and Adel must have a combined killcount of 100 or more by the end of the scenario.
*Nuclear Bazooka
**Meet the requirements for GP-02A
*Black Getter
**Michiru must have 20 kills or more by the end of the scenario.
'''Unit Acquisition:'''
*Gundam GP02
*Megarider
*Re-GZ BWS
*MP Nu Gundam
*Black Getter
*VF-1S S Valkyrie (Fokker)
*VF-1S S Valkyrie (Hikaru)
*VF-1A S Valkyrie (Kakizaki)
*VF-1J S Valkyrie
*YF-19 (Isamu)
*YF-21 (Guld)
*Battle 7 (Max)
*VF-19 Kai Fire Valkyrie (Basara)
*VF-11 MAXL Kai (Mylene)
*VF-17 Kai Nightmare (Ray)
*VF-17S Nightmare (Gamlin)
*VF-17D Nightmare (Physica)
*VF-17D Nightmare (Docker
*Soloship (Bess, Hatari)
*Ideon (Cosmo, Kasha, Moera)

|-
| colspan="4" class="fc-std-sc" |'''第３７話：果て無き旅路の始まり Scenario 37 - The Beginning of an Unending Journey'''

|-
| colspan="4" |'''Victory Condition:''' (1) Defeat all enemies; (2)(3) Devariim is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated; (3) Ally battleship is defeated, Bundle, Cutnall, or Kernagul are defeated
'''Skill Point:''' All enemies destroyed within 6 turns, with Devariim being last. '''Secret Requirements:''' '''Unit Acquisition:'''
*Heavy Weapons System parts for Nu Gundam
*Evangelion Unit 0 Custom gains the "N2 Mine" MAP attack
*Evangelion Unit 1 gains the "Magoroku E Sword" attack
*Gunbuster (Noriko)
*Sizzler Black (Jung)
*Eltrium (Tashiro, Deputy Chief)
*Bundle Ship (Bundle)
*Cutnall Ship (Cutnall)
*Kernagul Ship (Kernagul)

|- class="fc-route-h"
| colspan="2" |'''Go with the Soloship''' Gundam (0083, Zeta, ZZ, CCA, Wing, SEED) Getter Robo Raideen Daitarn 3 Evangelion Ideon GaoGaiGar
| colspan="2" |'''Go with the Battle 7''' Mazinger (Z, Great) Macross (DYRL, 7, Plus) Steel Jeeg Combattler V Voltes V Gunbuster Daimos Gaiking Goshogun Dancouga Virtual On

|-
| colspan="2" class="fc-route1" |'''第３８話：運命の炎の中で Scenario 38 - Within the Fires of Destiny'''
| colspan="2" class="fc-route3" |'''第３８話：戦火は星の瞬きと Scenario 38 - The Fires of War Among the Twinkling Stars'''

|-
| colspan="2" |'''Victory Condition:'''
*1st Part: Enemy Battleship is defeated
*2nd Part: (1) Defeat all enemies; (2) Dalam's Ship is defeated
'''Defeat Condition:'''
*1st Part: Ally battleship is defeated, Ideon is defeated
*2nd Part: (1) Ally battleship is defeated; (2) Ally battleship is defeated, Cosmo is defeated
'''Skill Point:''' Clear the map within 7 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Ideon loses Moera as a subpilot
*Ideon gains the "Ideon Gun" attack

| colspan="2" |'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Defeat all enemies within 6 turns. '''Secret Requirements:''' '''Unit Acquisition:'''

|-
| colspan="2" class="fc-route1" |'''第３９話：果てに待つもの Scenario 39 - What Awaits at the End'''
| colspan="2" class="fc-route3" |'''第３９話：ただ母星のために Scenario 39 - All for the Motherworld'''

|-
| colspan="2" |'''Victory Condition:''' (1)(2)Gabro Zan is defeated '''Defeat Condition:''' (1) Ally battleship is defeated, Ryouma, Hayato, Benkei, or Michiru are defeated; (2) Ally battleship is defeated, Ryouma, Hayato, Benkei, or Cosmo are defeated '''Skill Point:''' Destroy all Buff Clan ships within 8 turns, saving Gabro Zan for last. '''Secret Requirements:''' '''Unit Acquisition:'''
* Ideon gains Gije as a subpilot
* Shin Getter-1 gains the "Shin Shine Spark" attack

| colspan="2" |'''Victory Condition:''' Heinel is defeated '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Within 7 turns, defeat all enemies, then defeat Heinel and Richter (Richter must be defeated before Heinel) '''Secret Requirements:''' '''Unit Acquisition:'''

*Goshogun gains the "GoFlasher Special" attack

|-
| colspan="2" class="fc-route1" |'''第４０話：勇者王、最後の刻！ Scenario 40 - The King of Brave’s Final Hour!'''
| colspan="2" class="fc-route3" |'''第４０話：勇気、果つる時… Scenario 40 - When Courage Fails...'''

|-
| colspan="2" |'''Victory Condition:'''
*1st Part: Defeat all enemies
*2nd Part: Ally battleship is defeated
'''Defeat Condition:'''
*1st Part: Defeat all enemies
*2nd Part: Gai is defeated
'''Skill Point:''' Defeat all enemies within 6 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*All GaoGaiGar units are lost

| colspan="2" |'''Victory Condition:''' (1)(2)(3) Defeat all enemies '''Defeat Condition:''' (1) Gai is defeated; (2) Ally battleship is defeated, Gai is defeated; (3) Ally battleship is defeated '''Skill Point:''' Defeat all enemies within 7 turns, with Palparepa Plus being the last one. '''Secret Requirements:''' '''Unit Acquisition:'''
*GaoFighGar (Gai)
*All GaoGaiGar units are lost

|-
| colspan="4" class="fc-std-sc" |'''第４１話：銀河が消滅する日 Scenario 41 - The Day the Galaxy is Extinguished'''

|-
| colspan="4" |'''Victory Condition:''' (1) Defeat all enemies; (2) GaoFighGar is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated, J is defeated '''Skill Point:''' GaoFighGar shot down by turn 7. '''Secret Requirements:'''
*Gije & Ganga Rube
**When given the option, choose to meet the opponent's challenge (first option).
'''Unit Acquisition:'''
*J-Ark (J, Tomoro)
|-
| colspan="4" class="fc-std-sc" |'''第４２話：超勇者黙示録 Scenario 42 - The Super Brave Apocalypse'''

|-
| colspan="4" |'''Victory Condition:'''
*1st Part: Defeat all enemies
*2nd Part: Genesis GaoGaiGar reaches the designated point in 4 turns
'''Defeat Condition:'''
*1st Part: Gai or J are defeated
*2nd Part: Ally battleship is defeated, Gai is defeated, 5th turn is reached
'''Skill Point:''' All enemies shot down by turn 7. '''Secret Requirements:'''
* J-Phoenix & Renais (Sub Pilot)
**Have J defeat Pia Decem on the first part of the stage. Defeat Pia Decem again to gain the attack.
'''Unit Acquisition:'''
* King J-der gains the "J-Phoenix" attack, and gains Renais as a sub-pilot
**Koryuu and Anryuu lose the "Renais Support Attack" attacks
*Genesic GaoGaiGar (Gai)
*J-Ark (J, Tomoro)
** Renais also is a sub-pilot if the conditions are met in the first part of the stage
*Goldymarg (Goldymarg)
*Big Volfogg (Volfogg)
*TenRyuJin (TenRyuJin)
*KoRyu (KoRyu)
*AnRyu (AnRyu)
*EnRyu (EnRyu)
*HyoRyu (HyoRyu)
*Mic Sounder XIII (Mic Sounder XIII)

|- class="fc-route-h"
|'''Touma Route'''
|'''Kusuha Route'''
|'''Cobray Route'''
|'''Selena Route'''

|-
| class="fc-route1" |'''第４３話：閉ざされた世界で Scenario 43 - In a Closed-Off World'''
| class="fc-route2" |'''第４３話：真の龍神 Scenario 43 - The True Dragon God'''
| class="fc-route3" |'''第４３話：人形たちの宴 Scenario 43 - The Doll’s Banquet'''
| class="fc-route4" |'''第４３話：サイレント・クライ Scenario 43 - Silent Cry'''

|-
|'''Victory Condition:'''
*1st Part: (1) Defeat all enemies; (2) Vaikran is defeated, Houle is defeated
*2nd Part: Baran is defeated
'''Defeat Condition:'''
*1st Part: (1) Ally battleship is defeated, Touma or Ryusei are defeated; (2) Ally battleship is defeated, Ryusei is defeated
*2nd Part: Touma is defeated
'''Skill Point:''' Defeat the Bemidoban within 5 turns. '''Secret Requirements:''' '''Unit Acquisition:'''

|'''Victory Condition:''' (1) Defeat Shin RyuOhKi; (2) Vaikran is defeated, Houle is defeated '''Defeat Condition:''' (1) Kusuha or Ryusei are defeated; (2) Ally battleship is defeated, Ryusei is defeated '''Skill Point:''' Defeat Shin RyuOhKi within 5 turns. '''Secret Requirements:''' '''Unit Acquisition:'''

|'''Victory Condition:'''
*1st Part: (1) Defeat all enemies; (2) Vaikran is defeated, Houle is defeated
*2nd Part: Valk Baal is defeated
'''Defeat Condition:'''
*1st Part: (1)(2) Ally battleship is defeated, Ryusei is defeated
*2nd Part: Cobray is defeated
'''Skill Point:''' Defeat the Bemidoban within 5 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Dis Astranagant (Cobray) is unavailable during the intermission

|'''Victory Condition:''' (1) Defeat all enemies; (2)(3) Vaikran is defeated, Houle is defeated'''Defeat Condition:''' (1)(2) Ally battleship is defeated, Selena, Ibis, or Ryusei are defeated (3) Ryusei is defeated'''Skill Point:''' Defeat the Bemidoban within 5 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*AS Alegrias (Selena, Elma?) Is unavailable until the next stage

|-
| class="fc-route1" |'''第４４話：闘志、未来のために Scenario 44 - Fighting Spirit, for the Future'''
| class="fc-route2" |'''第４４話：四神招魂、ここに Scenario 44 - The Four Gods Souls, Gather Here'''
| class="fc-route3" |'''第４４話：鋼の戦神 Scenario 44 - The Steel War God'''
| class="fc-route4" |'''第４４話：マイホーム・マイフレンズ Scenario 44 - My Home, My Friends'''

|-
|'''Victory Condition:'''
*1st Part: Vaikran is defeated
*2nd Part: (1)(2) Vaikran is defeated
'''Defeat Condition:'''
*1st Part: Ally battleship is defeated, Ryusei is defeated
*2nd Part: (1) Touma or Lyria are defeated; (2) Touma, Baran, or Lyria are defeated
'''Skill Point:''' Destroy the Vaikran within 5 turns. '''Secret Requirements:'''
*VF-19F Excaliburs
**Max must have a total of 60 or more kills by the end of the scenario, if you do not pick the Go to Varauta route.
*Gije & Ganga Rube
**You must pick the Go To Bozoan Route.
'''Unit Acquisition:'''
* DaiRaioh gains the "Jinrai" attack 
*Banpreios (Ryuusei, Rai, Mai)
*Dygenguar (Sanger)
*Aussenseiter (Ratsel)
*Shumel (Lyria)
*Bemidoban (Baran)

|'''Victory Condition:'''
*1st Part: Vaikran is defeated
*2nd Part: (1)(2) Vaikran is defeated
'''Defeat Condition:'''
*1st Part: Kusuha or Ryusei are defeated
*2nd Part: (1) Ally battleship is defeated, Kusuha is defeated; (2) Kusuha, Bullet, or Lyria are defeated
'''Skill Point:''' Destroy the Vaikran within 5 turns. '''Secret Requirements:'''
*VF-19F Excaliburs
**Max must have a total of 60 or more kills by the end of the scenario, if you do not pick the Go to Varauta route.
*Gije & Ganga Rube
**You must pick the Go To Bozoan Route.
'''Unit Acquisition:'''
*Banpreios (Ryuusei, Rai, Mai)
*Dygenguar (Sanger)
*Aussenseiter (Ratsel)
*Shumel (Lyria)
*Shin RyuKoOh can now transform into Shin KoRyuOh

|'''Victory Condition:'''
*1st Part: (1) Defeat all enemies; (2) Vaikran is defeated
*2nd Part: Defeat all enemies
'''Defeat Condition:'''
*1st Part: (1)(2) Ally battleship is defeated, Ryusei, Arad or Seola are defeated
*2nd Part: Ally battleship is defeated, Cobray or Lyria are defeated
'''Skill Point:''' Destroy the Vaikran within 3 turns of its arrival. '''Secret Requirements:'''
*VF-19F Excaliburs
**Max must have a total of 60 or more kills by the end of the scenario, if you do not pick the Go to Varauta route.
*Gije & Ganga Rube
**You must pick the Go To Bozoan Route.
'''Unit Acquisition:'''
*Dis Astranagant (Cobray)
*Banpreios (Ryuusei, Rai, Mai)
*Dygenguar (Sanger)
*Aussenseiter (Ratsel)
*Shumel (Lyria)

|'''Victory Condition:'''
*1st Part: (1) Valk Isher is defeated; (2) Vaikran is defeated
*2nd Part: (1)(2) Vaikran is defeated
'''Defeat Condition:'''
*1st Part: (1)(2) Ally battleship is defeated, Ryusei or Ibis are defeated
*2nd Part: (1) Ally battleship is defeated, Selena, Ibis, or Lyria are defeated; (2) Selena or Lyria are defeated
'''Skill Point:''' Destroy the Vaikran within 3 turns of its arrival. '''Secret Requirements:'''
*VF-19F Excaliburs
**Max must have a total of 60 or more kills by the end of the scenario, if you do not pick the Go to Varauta route.
*Gije & Ganga Rube
**You must pick the Go To Bozoan Route.
'''Unit Acquisition:'''
*Banpreios (Ryuusei, Rai, Mai)
*Dygenguar (Sanger)
*Aussenseiter (Ratsel)
*Shumel (Lyria)
*Alterion (CF) replaces Slay with Tsugumi as a subpilot
*Vegalion (Slay)
**Alterion (CF) and Vegalion can combine into Hyperion

|}
 

==Stages 45 - 48==
{| width="100%"
|- class="fc-route-h"
| colspan="2" |'''Go to Earth'''
| colspan="2" |'''Go to Space'''

|- class="fc-route-h"
| width="25%" |'''Search for Irui''' Mazinger (Z, Great) Getter Robo Kotetsu Jeeg Gaiking Dancouga
| width="25%" |'''Fight against ZAFT''' Gundam (0083, Z, ZZ, CCA) Gundam Wing Gundam SEED Evangelion
| width="25%" |'''Go to Varauta''' Macross (DYRL, 7, Plus) GoShogun Daitarn 3 Gunbuster
| width="25%" |'''Go to Boazan''' Ideon Combattler V Voltes V Daimos Raideen GaoGaiGar Virtual On

|-
| class="fc-route1" |'''第４５話：とらわれの心、叫ぶ時 Scenario 45 - When the Captive Heart Cries Out'''
| class="fc-route2" |'''第４５話：忍び寄る終焉 Scenario 45 - Creeping Death'''
| class="fc-route3" |'''第４５話：悪夢の突入作戦 Scenario 45 - Charging into a Nightmare'''
| class="fc-route4" |'''第４５話：もう一つの母星ボアザン Scenario 45 - Another Mother Planet - Boazan'''

|-
|'''Victory Condition:''' (1) Defeat all enemies: (2) Legion is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated '''Skill Point:''' Defeat all enemies within 7 turns '''Secret Requirements:'''
'''Unit Acquisition:'''

|'''Victory Condition:''' (1) Defeat all enemies; (2) All Angels are defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated, Shinji, Asuka, or Rei are defeated '''Skill Point:''' Defeat all enemies within 5 turns. '''Secret Requirements:'''
*Early Nu Gundam HWS
**If you did not receive it on Scenario 37, Amuro must have 60 or more kills by the end of the scenario.
*EVA-01 F-Type Equipment(optional)
**Shinji must defeat Armisael.
*Neue Ziel
**Kou must have 40 or more kills than Keith by the end of the scenario.
*Val Varo
**Keith must have 20 or more kills than Kou by the end of the scenario.
*Gerbera Tetra
**Kou and Keith's killcounts must be within 6 of one another by the end of the scenario.
*Quin Mantha
**The sum of Ple and Ple 2's killcounts must be a number ending in 5 at the end of the scenario.
*Haman's Qubeley
**The sum of Ple and Ple 2's killcounts must be a number ending in 0 at the end of the scenario.
*MP Qubeleys
**The sum of Ple and Ple 2's killcounts must be a number ending in 7 at the end of the scenario.
*Doven Wolf
**The sum of Beecha and Mondo's killcounts must be a number ending in 0 at the end of the scenario.
*Geymalk
**The sum of Beecha and Mondo's killcounts must be a number ending in 5 at the end of the scenario.
*Strike Rouge IWSP
**The sum of Cagalli, Julie, Mayura, and Asagi's killcounts must be 100 or more by the end of the scenario.
*Early Full Armor ZZ Gundam
**Judau, Mondo, Beecha, Elle, Roux, and Iino's combined killcounts must be greater than 115 by the end of this scenario.
'''Unit Acquisition:'''
*Neue Ziel OR Val Varo OR Gerbera Tetra
*Quin Mantha OR Haman's Qubeley OR Mass Production Qubeley (x2)
*Doven Wolf OR Geymalk
*Strike Rougue IWSP
*Heavy Weapon System for Nu Gundam
*Full Armor Parts for ZZ Gundam
*Evangelion Unit 2 gains the "A.T. Field" attack
*Evangelion Unit 0 Custom gains the "Lance of Longinus" attack

|'''Victory Condition:'''
*1st Part: All allies reach the designated point, aside Battle 7
*2nd Part: Any ally reaches the designated point
'''Defeat Condition:'''
*1st Part: Any ally is defeated
*2nd Part: Any ally is defeated
'''Skill Point:''' Defeat all enemies before moving a unit to the target area. '''Secret Requirements:'''
'''Unit Acquisition:'''
*The following all gain the "Large Anti-Ship Reaction Missile" attack
**VF-1S S Valkyrie (Focker), VF-1S S Valkyrie (Hikaru), VF-1A S Valkyrie (Kakizaki)
**VF-17S Nightmare (Gamlin), VF-17D Nightmare (Docker), VF-17D Nightmare (Physica)
**YF-19 (Isamu), YF-21 (Guld)

|'''Victory Condition:''' Zartan is defeated '''Defeat Condition:''' Any ally is defeated '''Skill Point:''' Destroy all other enemies before destroying Zaltan. '''Secret Requirements:'''
'''Unit Acquisition:'''
*Voltes V is unavailable during the intermission
*Daimos is unavailable during the intermission

|-
| class="fc-route1" |'''第４６話：さらば父よ、戦士達の旅立ち Scenario 46 - Farewell, Father! The Warriors Depart'''
| class="fc-route2" |'''第４６話：永遠を信じて Scenario 46 - Believe in Eternity'''
| class="fc-route3" |'''第４６話：野望の第４惑星 Scenario 46 - The Fourth Planet of Ambition'''
| class="fc-route4" |'''第４６話：崩れゆく邪悪の塔 Scenario 46 - The Collapsing Tower of Evil'''

|-
|'''Victory Condition:''' (1) Steel Jeeg persuades Flora; (2) Defeat Yamata no Orochi, Demonica, and the Dragon Ship; (3) '''Defeat Condition:''' (1) Flora is defeated, Ally battleship is defeated, Kouji, Tetsuya, or Steel Jeeg are defeated; (2) Yamata no Orochi reaches the designated point, Ally battleship is defeated, Kouji, Tetsuya or Steel Jeeg are defeated '''Skill Point:''' Destroy Ryuuma and the Grand Marshall of Hell within 8 turns. '''Secret Requirements:'''
*Minmei's Disc
**Move Boss's squad onto either 'Hut' tile on the beach, and you will pick up the item
'''Unit Acquisition:'''
*Mazinkaizer gains the "Kaizer Nova" attack and Flight (S Rank in Air)

|'''Victory Condition:''' (1)(2) Defeat all enemies; (3) The Dominion withdraws '''Defeat Condition:''' (1) Any ally is defeated; (2)(3) Ally battleship is defeated, Kira or Athrun are defeated '''Skill Point:''' Destroy the Dominion (retreats at (10000HP (E) / 15000HP (N)/20000HP (H)) '''Secret Requirements:''' '''Unit Acquisition:'''
*Eternal (Lacus, Andrew)
*BuCUE
*METEOR parts for Freedom Gundam
*METEOR parts for Justice Gundam
*LaGOWE

|'''Victory Condition:''' (1) Guide all enemies east past the designated line; (2) All allies reach the escape point '''Defeat Condition:''' (1) Any ally is defeated, Any enemy is defeated; (2) Any ally is defeated '''Skill Point:''' Clear the map by defeating all enemies within 8 turns of the victory condition change '''Secret Requirements:'''
*VF-19F Excaliburs
**Max must get 15 or more kills on this scenario.
'''Unit Acquisition:'''
*VF-22S Sturmvogel II (Max)
*FBz-99G Zaubergeran (Gamlin)
*VF-19 Kai Fire Valkyrie gains the song "TRY AGAIN"
**VF-19 Kai Fire Valkyrie, VF-11 MAXL Kai, and VF-17 Kai Nightmare gain the "TRY AGAIN" (MAP) and (ALL) combination attack

|'''Victory Condition:''' (1) None; (2) Warchimedes is defeated; (3) Janera is defeated '''Defeat Condition:''' (1) Any friendly unit is defeated, Voltes V or Daimos are defeated; (2)(3) Ally battleship is defeated, Hyouma, Ken'ichi, Kazuya, or Heinel are defeated '''Skill Point:''' Destroy all enemies and finish the stage within 10 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Combattler V, Voltes V, and Daimos gain the "Choudenji SeiKenZuki" combination attack

|-
| class="fc-route1" |'''第４７話：神になろうとした男 Scenario 47 - The Man Who Tried to Become a God'''
| class="fc-route2" |'''第４７話：ヒトの見た夢 Scenario 47 - The Dream People Saw'''
| class="fc-route3" |'''第４７話：大宇宙の意志 Scenario 47 - The Will of the Universe'''
| class="fc-route4" |'''第４７話：因果の海で Scenario 47 - In the Sea of Causality'''

|-
|'''Victory Condition:''' (1) Defeat all enemies; (2) Shapiro is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated '''Skill Point:''' Destroy Shapiro within 6 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Gaiking and Daiku Maryuu gain the "Giant Cutter Upside-down Slash" combination attack

|'''Victory Condition:''' (1)(2)(3) Defeat all enemies; '''Defeat Condition:''' (1) Ally battleship is defeated, Kira, Mwu, or Dearka are defeated; (2) Kira is defeated; (3) The Vesalius is defeated '''Skill Point:''' Orga, Clotho and Shani shot down before Fllay reaches the Dominion. '''Secret Requirements:''' '''Unit Acquisition:'''

|'''Victory Condition:''' (1)(2)(3) Defeat all enemies '''Defeat Condition:''' (1) Any ally is defeated; (2) Ally battleship is defeated, Bundle is defeated; (3) Ally battleship is defeated, Bundle, Gamlin, or Mylene are defeated '''Skill Point:''' Destroy all SMTC units within 5 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*VF-19S Excalibur (before deployment)
*VF-19F Excalibur (x2) (before deployment)
*Bundle's Ship (Bundle, Cutnal, Kernagul)

|'''Victory Condition:'''
*1st and 2nd Part: Defeat all enemies within (5 (E) / 4 (N) / 3 (H)) turns
*3rd and 4th Part: Defeat all enemies within (4 (E) / 3 (N) / 2 (H)) turns
*5th Part: Defeat all enemies within (8 (E) / 7 (N) / 6 (H)) turns
'''Defeat Condition:'''
*1st and 2nd Part: Ally battleship is defeated, Turn (6 (E) / 5 (N) / 4 (H)) is reached
*3rd and 4th Part: Ally battleship is defeated, Turn (5 (E) / 4 (N) / 3 (H)) is reached
*5th Part: Ally battleship is defeated, Turn (9 (E) / 8 (N) / 7 (H)) is reached
'''Skill Point:''' During the 5th Part: Shoot down the two Gataman Zans before the Gabro Zan '''Secret Requirements:''' '''Unit Acquisition:'''

|-
| colspan="2" class="fc-route1" |'''第４８話：失われた者たちへの鎮魂歌 Scenario 48 - Requiem for the Lost'''
| colspan="2" class="fc-route4" |'''第４８話：銀河に死す Scenario 48 - To Die in the Galaxy'''

|-
| colspan="2" |'''Victory Condition:''' (1) Deathgaia, Gildrome, and Helmut are defeated; (2) Mute Zalbados is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated '''Skill Point:''' Defeat all enemies within 6 turns after Muge Zalbados appears, then defeat Muge Zalbados '''Secret Requirements:'''
*Early Nu Gundam HWS
**If you did not receive it on Scenario 37 or 45, Amuro must have 60 or more kills by the end of the scenario.
'''Unit Acquisition:'''

| colspan="2" |'''Victory Condition:''' (1) Defeat all enemies; (2) Gollum or Zomd are defeated; (3) Defeat all enemies; (4) Gabro Zan is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated, Basara is defeated; (3)(4) Ally battleship is defeated, Ideon is defeated '''Skill Point:''' Destroy GaviGla (retreats at 8000HP (E) / 10000HP (N) / 12000HP (H)) '''Secret Requirements:'''
*Early Nu Gundam HWS
**If you did not receive it on Scenario 37 or 45, Amuro must have 60 or more kills by the end of the scenario.
*Gije & Ganga Rube
**The Ide Gauge must reach level 5 during this scenario.
'''Unit Acquisition:'''
*Ideon replaces Gije with Dek as a Subpilot
*Battle 7 gains the "Large Anti-Ship Reaction Missile" attack
*VF-19 Kai Fire Valkyrie (Basara) is unavailable during the intermission

|}
 

==Stages 49 - 58==
{| width="100%"
|-
| colspan="3" class="fc-std-sc" |'''第４９話：銀河に響く歌声 Scenario 49 - Songs Resounding Through the Galaxy'''

|-
| colspan="3" |'''Victory Condition:'''
*1st Part: Defeat all enemies, In 5 turns Battle 7 reaches the designated point
*2nd Part: (1) In 6 turns, Battle 7 reaches the designated point; (2)(3)(4) Gepelnitch is defeated
'''Defeat Condition:'''
*1st Part: Ally battleship is defeated, Battle 7 doesn't reach the designated point by turn 6
*2nd Part: (1) Ally battleship is defeated, Mylene or Ray are defeated, Battle 7 doesn't reach the designated point by turn 7; (2) Ally battleship is defeated, Ray is defeated; (3) Ally battleship is defeated, Basara, Mylene, or Ray are defeated; (4) Ally battleship is defeated, Basara, Mylene, Ray, or Sybil are defeated
'''Skill Point:''' GaviGla is defeated (in the 1st part) '''Secret Requirements:'''
*Gavil and FBz-99G Zaubergeran
**If Gamlin has over 50 kills, Gamlin must defeat GaviGla during the first half of the scenario. During the second half of the scenario, do not defeat Gavil.
'''Unit Acquisition:'''
*VF-22S Sturmvogel II (Max)
*VF-22S Sturmvogel II (Milia)
*Sybil (Sybil)
**VF-19 Kai Fire Valkyrie, VF-11 MAXL Kai, and VF-17 Kai Nightmare, and Sybil gain the "TRY AGAIN" combination attack
*FBz-99G Zaubergeran (Gavil)

|-
| colspan="3" class="fc-std-sc" |'''第５０話：二つの門と二つの星 Scenario 50 - Two Gates, Two Stars'''

|-
| colspan="3" |'''Victory Condition:''' (1) Hermodr Echad is defeated; (2) Zfield is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated '''Skill Point:''' Destroy the Hermodr Echad within 5 turns. '''Secret Requirements:'''
*Duel Gundam & Yzak
**Dearka's killcount must be 50 or more by the end of the scenario.
'''Unit Acquisition:'''

|-
| colspan="3" class="fc-std-sc" |'''第５１話：終わらない明日へ Scenario 51 - To an Unending Tomorrow'''

|-
| colspan="3" |'''Victory Condition:'''
*1st Part: (1) Destroy all nuclear missiles; (2) Dominion is defeated & Athrun reaches the designated point
*2nd Part: Destroy the Genesis reactor within 4 turns
'''Defeat Condition:'''
*1st Part: (1) Any missile reaches the end of the map, Ally battleship is defeated, Kira, Athrun or Cagalli are defeated; (2) Ally battleship is defeated, Kira, Athrun or Cagalli are defeated
*2nd Part: Kira is defeated, reach the 5th turn
'''Skill Point:''' Destroy the Providence Gundam (in the 2nd part) '''Secret Requirements:'''
*Duel Gundam & Yzak
**During the first half of the scenario, destroy all of the nukes, then have Dearka battle with Yzak
**Both must survive the first half of the scenario
'''Unit Acquisition:'''
*Cagalli and Lacus unlock the SEED pilot skill
*Duel Gundam (Yzak) (can join permanently)

|-
| colspan="3" class="fc-std-sc" |'''第５２話：世界の中心でアイを叫んだもの Scenario 52 - The One Who Cried "Love" at the Heart of the World'''

|-
| colspan="3" |'''Victory Condition:'''
*1st Part: (1)(2)(3) Defeat all enemies (4)(5) EVA Unit 1 is defeated
*2nd Part: EVA Unit 1 is defeated
'''Defeat Condition:'''
*1st Part: (1) Any ally is defeated; (2) Shinji is defeated; (3)(4) Ally battleship is defeated; (5) Ally battleship is defeated, Reach the 6th turn after the "Cross" grows from the Earth
*2nd Part: Shinji is defeated
'''Skill Point:''' Asuka survives for 2 full turns. '''Secret Requirements:'''
*Neue Ziel
**Kou must have 40 or more kills than Keith by the end of the scenario.
*Val Varo
**Keith must have 20 or more kills than Kou by the end of the scenario.
*Gerbera Tetra
**Kou and Keith's killcounts must be within 6 of one another by the end of the scenario.
*Quin Mantha
**The sum of Ple and Ple 2's killcounts must be a number ending in 5 at the end of the scenario.
*Haman's Qubeley
**The sum of Ple and Ple 2's killcounts must be a number ending in 0 at the end of the scenario.
*MP Qubeleys
**The sum of Ple and Ple 2's killcounts must be a number ending in 7 at the end of the scenario.
*Doven Wolf
**The sum of Beecha and Mondo's killcounts must be a number ending in 0 at the end of the scenario.
*Geymalk
**The sum of Beecha and Mondo's killcounts must be a number ending in 5 at the end of the scenario.
*EVA-01 F-Type Equipment
**Shinji must defeat Zeruel on the first part of this scenario.
**Shinji must defeat EVA-01 on the second part of this scenario.
**The sum of Shinji, Asuka, and Rei's killcounts must be 250 or more, or 150 or more if you met the requirement on scenario 45.
*Hi-Nu Gundam
**Amuro and Bright's combined killcounts must be greater than 120 by the end of this scenario.
*Sazabi
**Amuro and Kamille's killcount must be 50 or more each at the end of this scenario. You will receive it at the start of next scenario.
*Strike Rouge IWSP
**If you did not receive it on Scenario 45, the sum of Cagalli, Julie, Mayura, and Asagi's killcounts must be 100 or more by the end of the scenario.
*Destroid Monster
**If you did not receive it on Scenario 31, the sum of Fokker, Hikaru, and Kakizaki's killcounts must be 100 or more by the end of this scenario.
'''Unit Acquisition:'''
*Evangelion Unit 0 (Kaowru)
*Evangelion Unit 0 loses the "Lance of Longinus" attack

|-
| colspan="3" class="fc-prologue" |'''Beyond this point, losing Ideon results in a Game Over'''
|-
| colspan="3" class="fc-std-sc" |'''第５３話：出航！銀河殴り込み艦隊！ Scenario 53 - The Galactic Assault Fleet Takes Sail!'''

|-
| colspan="3" |'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' 230 enemy units shot down by turn 7. '''Secret Requirements:''' '''Unit Acquisition:'''
*All secret units and parts are given after the stage begins <ul><li>Neue Ziel OR Val Varo OR Gerbera Tetra</li><li>Quin Mantha OR Haman's Qubeley OR Mass Production Qubeley (x2)</li><li>Doven Wolf OR Geymalk</li><li>Strike Rougue IWSP</li><li>Hi-Nu Gundam</li><li>Sazabi</li><li>Destroid Monster</li><li>F-Type Equipment for Evangelion Unit 1</li><li>Atomic Bazooka parts for GP-02</li><li>Heavy Weapon System for Nu Gundam</li></ul>
* Full Armor modular parts for Gundam ZZ
** If the secret requirements were not met earlier
*MP Nu Gundam
**Fin Funnel parts for MP Nu Gundam
*Gunbuster adds Kazumi as a Subpilot
**Gunbuster gains the "Super Inazuma Kick" attack
*Ra Cailum gains the "Nuclear Missile" MAP and ALL attacks

|-
| colspan="3" class="fc-std-sc" |'''第５４話：神に守られし星 Scenario 54 - The Planet Guarded by the Gods'''

|-
| colspan="3" |'''Victory Condition:'''
*1st Part: (1) Defeat all enemies; (2) The SRX Team rescues [https://akurasu.net/wiki/Super_Robot_Wars/Alpha_3/Info_Dump#Finding_Aya_on_Scenario_54 Aya]; (3) Jumora is defeated
*2nd Part: Bemidoban is defeated
'''Defeat Condition:'''
*1st Part: (1)(2) Ally battleship is defeated, Ryusei or Viletta are defeated; (3) Ally battleship is defeated, Ryusei, Viletta, Baran, or Lyria are defeated
*2nd Part: Sanger is defeated
**2nd Part (Touma Route): Touma is defeated
'''Skill Point:''' Clear the map within 10 turns, with both Hermoz defeated '''Secret Requirements:''' '''Unit Acquisition:'''
*Banpreios adds Aya as a Subpilot
**Branpreios gains the "Tenjou Tenge Nendou Musou-ken" attack
**Branpreios and R-GUN Powered gain the "Tenjou Tenge Ichigeki Hissatsu-ho" combination attack
*Shumel (Lyria)
*Bemidoban (Baran)

|-
| colspan="3" class="fc-std-sc" |'''第５５話：まつろわぬ神 Scenario 55 - The God Who Resists Order'''

|-
| colspan="3" |'''Victory Condition:'''
*1st Part: (1) Defeat all enemies; (2) Defeat Gebel GanEden
*2nd Part: (1) Defeat all enemies; (2) Defeat Gebel GanEden
'''Defeat Condition:'''
*1st Part: (1)(2) Ally battleship is defeated
*2nd Part: (1)(2) Ally battleship is defeated
'''Skill Point:''' Within 6 turns, defeat both Zfiruds '''Secret Requirements:''' '''Unit Acquisition:'''

|-
| colspan="3" class="fc-std-sc" |'''第５６話：終わりなき総力戦 Scenario 56 - Unending Total War'''

|-
| colspan="3" |'''Victory Condition:'''
*1st Part: Drowa Zan is defeated within 5 turns
*2nd Part: (1) Soloship move next to the Bairal Jinn; (2) Any unit reaches the designated point
'''Defeat Condition:'''
*1st Part: Ally battleship is defeated, 6th turn is reached
*2nd Part: (1)(2) Ally battleship is defeated
'''Skill Point:''' Clear the map within 7 turns. '''Secret Requirements:'''
*Gije & Ganga Rube
**You must pick the Fight The Buff Clan option at the end of the scenario.
*Bad Ending Route
**On New Game+, choose to fight (first option)
'''Unit Acquisition:'''

|- class="fc-route-h"
| width="40%" |'''Fight The Buff Clan''' Ideon, Getter Robo Combattler V, Voltes V, Daimos Daitarn 3 Gundam (0083, Zeta, ZZ, CCA, Wing, SEED)
| width="40%" |'''Fight The STMC''' Mazinger (Z, Great), Steel Jeeg, Raiden Goshogun, Dancouga, Gaiking Macross (DYRL, Plus, 7) Gunbuster, Evangelion, GaoGaiGar Virtual On
| width="20%" |'''Bad Ending '''

|-
| class="fc-route1" |'''第５７話：憎しみの環の中で Scenario 57 - In a Circle of Hatred'''
| class="fc-route3" |'''第５７話：終わりの始まり Scenario 57 - The Beginning of the End'''
| class="fc-prologue" |'''イデ発動ルート最終話：銀河に君と''' '''Ide Activation Final Scenario - With You In The Galaxy'''

|-
|'''Victory Condition:'''
*1st Part: (1) Defeat all enemies; (2) Soloship reaches the designated point
*2nd Part: Defeat all enemies within (11 (E) / 9 (N) / 7 (H)) turns
'''Defeat Condition:'''
*1st Part: (1)(2) All allies are defeated
*2nd Part: Turn (12 (E) / 10 (N) / 8 (H)) is reached, Ally battleship is defeated
'''Skill Point:''' Defeat all enemies within (10 (E) / 8 (N) / 6 (H)) turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Ganga Rube (Gije)

|'''Victory Condition:''' (1)(2) Defeat all enemies '''Defeat Condition:''' (1) Eltrium is defeated; (2) Ally battleship is defeated '''Skill Point:''' Defeat all enemies within 7 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Eltrium (Tashiro, Deputy Chief)

| rowspan="4" |'''Victory Condition:''' Bairal Jinn is defeated '''Defeat Condition:''' Ally battleship is defeated '''Secret Requirements:''' '''Unit Acquisition:'''

|-
| class="fc-route1" |'''第５８話：発動 Scenario 58 - Activation'''
| class="fc-route3" |'''第５８話：死闘、未来を懸けて Scenario 58 - The Mortal Struggle for the Future'''

|-
|'''Victory Condition:'''
*1st Part: Bairal Jinn is defeated
*2nd Part: Bairal Jinn is defeated
'''Defeat Condition:'''
*1st Part: Ally battleship is defeated
*2nd Part: Ally battleship is defeated
'''Skill Point:''' Destroy the Bairal Jinn within six turns. '''Secret Requirements:''' '''Unit Acquisition:'''

|'''Victory Condition:''' (1)(2) Defeat all enemies '''Defeat Condition:''' (1) Ally battleship is defeated; Drowa Zan is defeated, Ally battleship is defeated(2) '''Skill Point:''' All Buff Clan units survive the stage. '''Secret Requirements:''' '''Unit Acquisition:'''

|}
 

==Stages 59 - END==
{| width="100%"
|-
| colspan="2" class="fc-std-sc" |'''第５９話：果てしなき流れの果てに Scenario 59 - At the End of the Unending Flow'''

|-
| colspan="2" |'''Victory Condition:'''
*1st Part: Reach the 11th turn
*2nd Part: Defeat all enemies, 6th turn is reached
'''Defeat Condition:'''
*1st Part: Ally battleship is defeated, Any enemy enters the designated area
*2nd Part: Any enemy enters the designated area, Ally battleship is defeated, Noriko or Jung are defeated
'''Skill Point:''' Defeat all enemies within 5 turns. '''Secret Requirements:''' '''Unit Acquisition:'''

|- class="fc-route-h"
| width="50%" |'''Normal Ending - 56 Skill Points or less, OR turn count 421 or more'''
| width="50%" |'''Good Ending - 57 Skill Points or more AND turn count 420 or less'''

|-
| class="fc-route1" |'''最終話: 終焉の銀河 Final Scenario - A Galaxy of Death'''
| class="fc-route3" |'''最終話: 今遥か遠い彼方… Final Scenario - Now, The Faraway Yonder'''

|-
|'''Victory Condition:''' (1) ??? is destroyed; (2) Kaiser Ephres is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated '''Secret Requirements:''' '''Unit Acquisition:'''

|'''Victory Condition:''' (1) ??? is destroyed; (2)(3) Kaiser Ephres is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated; (3) Irui is defeated '''Secret Requirements:''' '''Unit Acquisition:'''
*Nashim Gan Eden (Irui)

|}

Super Robot Wars/Alpha 3/Flow Chart

2023-06-28T02:36:50Z

KomodoWork: /* Stages 01 - 18 */ Missing units from Selena Route chart in Stage 11 (a lot of units, but basically the super robot route units from Kusuha and Touma route split) [Confirmed in playthrough]

Units and Pilots in Black join your team. 
Units and Pilots in Orange are available for that stage, then leave. 
Units and Pilots in Blue have special requirements. Check the [[../Secrets|Secrets]] page for more details. 
Units and Pilots in Red previously joined, but from this point, are rendered unusable. Those lost permanently are marked so, while others rejoin later on. 
Information in Green are upgrades for units already in your party.

==Stages 01 - 18==
{| width="100%"
|- class="fc-route-h"
| width="25%" |'''Touma Route'''
| width="25%" |'''Kusuha Route'''
| width="25%" |'''Cobray Route'''
| width="25%" |'''Selena Route'''

|-
| class="fc-route1" |'''第１話：闘志、炎に燃ゆる Scenario 1 - Within the Flames, Fighting Spirit Rises'''
| class="fc-route2" |'''第１話：出撃！鋼の龍虎 Scenario 1 - Launch! Dragon and Tiger of Steel'''
| class="fc-route3" |'''第１話：虚空からの転生 Scenario 1 - Reincarnated from the Void'''
| class="fc-route4" |'''第１話：シークレット・ミッション Scenario 1 - Secret Mission'''

|-
|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Any allied unit is defeated '''Skill Point:''' Defeat all enemies in 3 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Raioh (Touma)
*GaoGaiGar (Guy)
*Goldymarg (Goldymarg)
*HyoRyu (HyoRyu)
*EnRyu (EnRyu)

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Any allied unit is defeated '''Skill Point:''' Defeat all enemies in 2 turns '''Secret Requirements:'''
*Bullet
**You must be playing as Kusuha to recruit Bullet.
'''Unit Acquisition:'''
*Gouryu Kai (Kusuha)
*Raikou Kai (Bullet)
*Mazinkaiser (Kouji)
*Diana A (Sayaka)
*Shin Getter (Ryoma, Hayato, Benkei)
*Lady Command (Michiru)

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' (1) Werkbau is defeated; (2) Werkbau is defeated, ally battleship is defeated '''Skill Point:''' Defeat all enemies in 5 turns after enemy reinforcements show up '''Secret Requirements:'''
*Arado and Seolla
**You must be playing as Cobray to recruit Arado and Seolla.
'''Unit Acquisition:'''
*Werkbau (Cobray)
*Nu Gundam (Amuro)
*Ra Cailum (Bright, Torres)
*MP Nu Gundam (Kayra)
*Jegan (Katz)
*Incom & Funnel parts for MP Nu Gundam

|'''Victory Condition:''' (1) All enemies except Salamis Kai shot down; (2) R-Gun Powered shot down '''Defeat Condition:''' (1) Selena shot down, Salamis Kai shot down; (2) Selena shot down '''Skill Point:''' Defeat all enemies except the Salamis Kai in 4 turns '''Secret Requirements:'''
*Ibis and Slay
**You must be playing as Selena to recruit Ibis and Slay.
'''Unit Acquisition:'''
*AS Soleares (Selena, Elma)
*Albion (Synapse, Paserov)
*GP03 Dendrobium (Kou)
*GM Cannon II (Keith)
*GM Custom (Burning)
*GM Custom (Bate)
*GM Custom (Monsha)
*GM Cannon II (Adel)
*Zeta Gundam (Kamille)
*Re-GZ BWS (Four)
*Methuss (Fa)
*Super Gundam (Emma)
*Armed Fortress Orchis parts for Gundam Stamen
*G Defensor parts for Gundam Mk-II

|-
| class="fc-route1" |'''第２話: さらばGGG、さらば勇者 Scenario 2 - Farewell, GGG! Farewell, Braves!'''
| class="fc-route2" |'''第２話: 新たなる侵略者！立ち上がれV Scenario 2 - New Invaders! Rise Up, V!'''
| class="fc-route3" |'''第２話: 血の狼煙 Scenario 2 - Beacon Fire of Blood'''
| class="fc-route4" |'''第２話: フラッシュ・デイ Scenario 2 - Flash Day'''

|-
|'''Victory Condition:''' Defeat all enemies; Defeat ZX-01 '''Defeat Condition:''' Any allied unit is defeated '''Skill Point:''' Defeat the 4 Zonders in 2 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*GaoGaiGar (Guy)
*J-Der (J, Tomoro)
*Great Mazinger (Tetsuya)
*Venus A (Jun)
*Boss Borot (Boss, Nuke, Mucha)
*Kotetsu Jeeg (Jeeg)
*Big Shooter (Miwa)

|'''Victory Condition:''' (1) Defeat all enemies, (2) Defeat Dangel '''Defeat Condition:''' (1) Hyouma defeated (2) Any Allied Unit is defeated '''Skill Point:''' Defeat all enemies in 3 turns, do not lose any Federation Army squads '''Secret Requirements:''' '''Unit Acquisition:'''
*Combattler V (Hyoma, Juzo, Daisaku, Chizuru, Kosuke)
*Jegan (Federation Soldier) x 3

|'''Victory Condition:''' (1) Defeat the Magellan Kai-class Battleship (2) Defeat the Magellan Kai-class Battleship and Nuclear Missiles '''Defeat Condition:''' (1) Any ally unit is defeated (2) Nuclear Missiles reach the marked area on the map '''Skill Point:''' Defeat the enemy missiles and battleship in 7 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Clop-class (Federation Captain)
*Wildfalken (Seolla)
*MP Nu Gundam (Cobray)
*ZZ Gundam (Judau)
*Re-GZ BWS (Roux)
*Albion (Synapse, Paserov)
*GP03 Dendrobium (Kou)
*GM Cannon II (Keith)
*GM Custom (Burning)
*GM Custom (Bate)
*GM Custom (Monsha)
*GM Cannon II (Adel)
*Zeta Gundam (Kamille)
*Re-GZ BWS (Four)
*Methuss (Fa)
*Super Gundam (Emma)
*Armed Fortress Orchis parts for Gundam Stamen
*G Defensor Parts for Gundam Mk-II

|'''Victory Condition:''' Defeat any enemy battleship '''Defeat Condition:''' (1) Allied battleship is defeated; (2) Allied battleship is defeated, Selena is defeated '''Skill Point:''' Defeat the enemy battleship in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*ZZ Gundam (Judau)
*Re-GZ BWS (Roux)
*Nu Gundam (Amuro)
*Ra Cailum (Bright)
*Jegan (Katz)
*MP Nu Gundam (Keyra)
*AS Soleares (Selena, Elma)
*Incom & Funnel parts for MP Nu Gundam

|-
| colspan="4" class="fc-std-sc" |'''第３話: 逆襲！機界31原種 Scenario 3 - Counterattack! The 31 Machine Primevals!'''

|-
| colspan="4" |'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' (1) Ally battleship is defeated, One of the Machine Primevals reaches the edge of the map; (2) Ally battleship is defeated, One of the Machine Primevals reaches the edge of the map, J is defeated '''Skill Point:''' Defeat all enemies in 6 turns '''Secret Requirements:''' '''Unit Acquisition (Touma & Kusuha):'''
*J-Ark (J, Tomoro)
*Nu Gundam (Amuro)
*Ra Cailum (Bright, Torres)
*Jegan (Katz)
*MP Nu Gundam (Keyra)
*Albion (Synapse, Paserov)
*GP03 Dendrobium (Kou)
*GM Cannon II (Keith)
*GM Custom (Burning)
*GM Custom (Bate)
*GM Custom (Monsha)
*GM Cannon II (Adel)
*Zeta Gundam (Kamille)
*Re-GZ BWS (Four)
*Methuss (Fa)
*Super Gundam (Emma)
*Incom & Funnel parts for MP Nu Gundam
*Armed Fortress Orchis parts for Gundam Stamen
*G Defensor Parts for Gundam Mk-II
'''Unit Acquisition (Cobray & Selena):'''
*J-Ark (J, Tomoro)
*Mazinkaiser (Kouji)
*Diana A (Sayaka)
*Great Mazinger (Tetsuya)
*Venus A (Jun)
*Combattler V (Hyoma, Juzo, Daisaku, Chizuru, Kosuke)
*Koutetsu Jeeg (Jeeg)
*Big Shooter (Miwa)
*Shin Getter (Ryoma, Hayato, Benkei)
*Lady Command (Michiru)

|-
| colspan="4" class="fc-std-sc" |'''第４話：地獄門、開く Scenario 4 - The Gates of Hell Open'''

|-
| colspan="4" |'''Victory Condition:'''
*1st Part: Allied Battleship reaches the escape point in 5 turns, All Enemies are defeated in 5 turns
*2nd Part: Defeat all enemies
'''Defeat Condition:'''
*1st Part: Allied Battleship is defeated, Turn 6 starts
*2nd Part: SRX is defeated
'''Skill Point:''' Defeat all enemies in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*SRX (Damaged) (Ryuusei, Rai, Aya)

|-
| colspan="4" class="fc-std-sc" |'''第５話: 地球圏絶対防御線 Scenario 5 - The Earth Sphere’s Absolute Defense Line'''

|-
| colspan="4" |'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' (1) Ally battleship is defeated (2) Any allied unit is defeated '''Skill Point:''' Clear the stage in 6 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Mobieus Zero (Mwu)
*All Char's Counter Attack, Stardust Memory, and Zeta Gundam units are lost <ul><li>Nu Gundam(Amuro)</li><li>Ra Cailum (Bright, Torres)</li><li>MP Nu Gundam (Keyra)</li><li>Albion (Synapse, Paserov)</li><li>GP03 Dendrobium (Kou)</li><li>GM Cannon II (Keith)</li><li>GM Custom (Burning)</li><li>GM Custom (Bate)</li><li>GM Custom (Monsha)</li><li>GM Cannon II (Adel)</li><li>Zeta Gundam (Kamille)</li><li>Re-GZ BWS (Four)</li><li>Methuss (Fa)</li><li>Super Gundam (Emma)</li><li>Jegan (Katz)</li></ul>

|- class="fc-route-h"
|'''Touma Route''' Great Mazinger, Venus A, Boss Borot Steel Jeeg, Big Shooter
|'''Kusuha Route''' Getter Robo G, Lady Command Mazinger Z, Diana A Combattler V
|'''Cobray Route''' ZZ Gundam, ReGZ (BWS) Mobieus Zero
|'''Selena Route'''
|-
| class="fc-route1" |'''第６話：平和、遥か遠く Scenario 6 - A Faraway Peace'''
| class="fc-route2" |'''第６話：北米戦線、異常アリ Scenario 6 - Abnormalities on the North American Front'''
| class="fc-route3" |'''第６話：GUNDAM出撃 Scenario 6 - Gundam, Sortie'''
| class="fc-route4" |'''第６話：ザ・ビギニング Scenario 6 - The Beginning'''

|-
|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Any ally is defeated '''Skill Point:''' Defeat all enemies in 5 turns; Defeat the Yamata no Orochi last '''Secret Requirements:''' '''Unit Acquisition:'''
*GaiGar (Gai)
*Mic Sounders XIII (Mic Sounders XIII)

|'''Victory Condition:''' (1) Ally reaches the designated area; (2) Defeat all enemies '''Defeat Condition:''' Any ally defeated '''Skill Point:''' Reach target location without engaging in combat '''Secret Requirements:''' '''Unit Acquisition:'''
*Mazinkaiser → Mazinger Z (Kouji)
*Shin Getter Robo → Getter Robo G (Ryoma, Hayato, Benkei) 
*Dancouga (Shinobu, Sara, Masato, Ryo)

|'''Victory Condition:'''
*1st Part: Sigu is defeated, Vesalius is defeated
*2nd Part: Defeat all enemies 
'''Defeat Condition:'''
*1st Part: Any ally is defeated
*2nd Part: Any ally is defeated 
'''Skill Point:''' Accomplish either objective in 4 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Clop Class Battleship (Federation Officer)
*Wing Gundam Zero Kai (Heero)
*Gundam Deathscythe Hell Kai (Duo)
*Gundam Sandrock Kai (Quatre)
*Taurus (Hilde)
*Strike Gundam (Kira)

|'''Victory Condition:''' (1) AS Soleares reaches the designated point in 4 turns; (2) Defeat all enemies '''Defeat Condition:''' (1) Begin turn 5 without meeting victory conditions, Any ally is defeated; (2) Any ally is defeated '''Skill Point:''' Defeat all enemies in 4 turns and get the AS Soleares to the target square '''Secret Requirements:''' '''Unit Acquisition:'''
*CGUE (Rau)
*GINN (ZAFT Soldier) x 2
*Vesarius (Ades)

|-
| class="fc-route1" |'''第７話：燃えろ宙！妖花フローラの挑戦 Scenario 7 - Space Burns! The Enchanting Flora’s Challenge!'''
| class="fc-route2" |'''第７話：怒りの獣、野生の咆哮 Scenario 7 - The Wild Roar of the Raging Beast'''
| class="fc-route3" |'''第７話：崩壊の大地 Scenario 7 - Collapsing Land'''
| class="fc-route4" |'''第７話：ワンズ・ジャスティス Scenario 7 - One’s Own Justice'''

|-
|'''Victory Condition:''' 
*1st Part: Defeat all enemies
*2nd Part: Defeat all enemies
'''Defeat Condition:''' 
*1st Part: Any ally defeated
*2nd Part: Any ally defeated
'''Skill Point:''' Defeat all enemies in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*AnRyu (AnRyu)
*KouRyu (KouRyu)

|'''Victory Condition:''' (1) Defeat all enemies; (2) Defeat Dangel '''Defeat Condition:''' Any ally is defeated '''Skill Point:''' Defeat all Zubanzas, Boazan Flying Saucers, and Red Baloms within 4 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Black Wing (Alan)

|'''Victory Condition:''' (1) Defeat all enemies; (2) Archangel reaches the designated point, Defeat all enemies '''Defeat Condition:''' (1) Mwu is defeated; (2) Ally battleship is defeated, Kira or Mwu are defeated '''Skill Point:''' Defeat all enemies in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Strike Gundam (Kira)
*Archangel (Murrue, Natarle)
*Aile, Sword and Launcher Striker packs for Strike Gundam

|'''Victory Condition:''' Any ally reaches the designated point '''Defeat Condition:''' Any ally is defeated '''Skill Point:''' Defeat all enemies in 5 turns and get an allied unit to the target square '''Secret Requirements:''' '''Unit Acquisition:'''
*Altron Gundam (Wufei)
*Gundam Heavyarms Kai (Trowa)
*CGuE (Rau)
*Vesarius (Ades)
*Aegis Gundam (Athrun)
*Blitz Gundam (Nicol)
*Buster Gundam (Dearka)
*Duel Gundam (Yzak)

|-
| class="fc-route1" |'''第８話：立ち上がれ！勇気ある者達 Scenario 8 - Stand Up, People of Courage!'''
| class="fc-route2" |'''第８話：輝け！不死身の勇者 Scenario 8 - Shine, Undying Hero!'''
| class="fc-route3" |'''第８話：誘う声 Scenario 8 - An Inviting Voice'''
| class="fc-route4" |'''第８話：インビジブル・イントルーダー Scenario 8 - Invisible Intruder'''

|-
|'''Victory Condition:''' (1) Defeat all enemies; (2) ZX-02 is defeated '''Defeat Condition:''' (1) Any ally is defeated; (2) Gai is defeated, J is defeated '''Skill Point:''' Defeat all enemies in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*GaiGar → GaoGaiGar
*Mic Sounders XIII gains "Disc P", "Disc M", and "Disc X" attacks
*Goldymarg (Goldymarg)
*HyoRyu (HyoRyu)
*EnRyu (EnRyu)
*Big Volfogg (Big Volfogg)

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' (1) Any ally is defeated; (2) Akira is defeated '''Skill Point:''' Defeat the Bramble (retreats at 4000HP (E) / 6000HP (N) / 8000HP (H)) '''Secret Requirements:''' '''Unit Acquisition:'''
*Raideen (Akira)
*Bluegar (Jinguji, Mari)

|'''Victory Condition:'''
*1st Part: (1) Vesalius is defeated; (2) Defeat all enemies
*2nd Part: (1) Defeat all enemies; (2) Defeat all enemies except Valk Baal 
'''Defeat Condition:'''
*1st Part: Ally battleship is defeated, Seolla or Cobray are defeated
*2nd Part: Any ally is defeated 
'''Skill Point:''' Defeat Aegis, Duel, Buster, and Blitz Gundams in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Zeta Gundam (Kamille)
*Re-GZ BWS (Four)
*Methuss (Fa)
*Super Gundam (Emma)
*Ra Cailum (Bright, Torres)
*MP Nu Gundam (Cobray)
*Werkbau (Cobray)
*G Defensor parts for Gundam Mk-II

|'''Victory Condition:''' Reach turn 6 '''Defeat Condition:''' Any ally is defeated '''Skill Point:''' Defeat all the Jegans '''Secret Requirements:''' '''Unit Acquisition:'''
*CGuE (Rau)
*Vesarius (Ades)
*Aegis Gundam (Athrun)
*Blitz Gundam (Nicol)
*Buster Gundam (Dearka)
*Duel Gundam (Yzak)

|-
| class="fc-route1" |'''第９話：内なる修羅 Scenario 9 - Demons of War Within'''
| class="fc-route2" |'''第９話：再会！ニューヨーク解放戦 Scenario 9 - Reunion! The Battle to Retake New York'''
| class="fc-route3" |'''第９話：正義の在処 Scenario 9 - Where Justice Can Be Found'''
| class="fc-route4" |'''第９話：アベンジャー Scenario 9 - Avenger'''

|-
|'''Victory Condition:''' (1) Defeat all enemies; (2) Defeat Raioh '''Defeat Condition:''' (1) Any ally defeated; (2) Sanger is defeated '''Skill Point:''' Defeat the Bramble in 4 turns (retreats at 4000HP (E) / 6000HP (N) / 8000HP (H)) '''Secret Requirements:''' '''Unit Acquisition:'''
*Dygenguar (Sanger)
*Huckebein Mk-III Trombe (Ratsel)
*Raideen (Akira)
*Bluegar (Jingunji, Mari)
*Mazinger Z (Kouji)
**Mazinger Z (Kouji) and Great Mazinger (Tetsuya) gain the "Double Mazinger Blade" and "Double Burning Fire" combination attacks
*Diana A (Sayaka)
*Getter Robo G (Ryoma, Hayato, Benkei)
*Lady Command (Michiru)
*Combattler V (Hyoma, Juzo, Daisaku, Chizuru, Kosuke)

|'''Victory Condition:''' (1) Defeat all enemies; (2) Dancouga reaches the designated point; (3) Defeated Deathgaia, Dangel, and Warchamedes '''Defeat Condition:''' (1) Shinobu, Kusuha, or Bullet are defeated; (2) Shinobu, Kusuha, Bullet, or Alan are defeated; (3) Alan is defeated '''Skill Point:''' Clear the map in 8 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Black Wing (Alan)
*Dygenguar (Sanger)
*Huckebein Mk-III Trombe (Ratsel)

|'''Victory Condition:''' (1) Vesalius is defeated; Reduce the Muge Battleship under 2000 HP before it reaches the edge of the map '''Defeat Condition:''' (1) Ally battleship is defeated; (2) Muge Battleship reaches the western edge of the map '''Skill Point:''' Defeat all enemies before reducing the Muge Mothership's HP below 2000 or defeating it '''Secret Requirements:''' '''Unit Acquisition:'''

|'''Victory Condition:''' (1) Reduce the Archangel's HP to 50% or less, Defeat all enemies besides the Archangel; (2) Reduce the Varuch Ishar to 4000 HP or less. '''Defeat Condition:''' Any ally is defeated '''Skill Point:''' Defeat the Varuch Ishar (flees at 4000 HP) '''Secret Requirements:''' '''Unit Acquisition:'''
*CGuE (Rau)
*Vesarius (Ades)
*Aegis Gundam (Athrun)
*Blitz Gundam (Nicol)
*Buster Gundam (Dearka)
*Duel Gundam (Yzak)

|-
| class="fc-route1" |'''第１０話：激震の地底帝国 Scenario 10 - Tremors in the Underground Empire'''
| class="fc-route2" |'''第１０話：龍を喰らうもの Scenario 10 - That Which Devours the Dragon'''
| class="fc-route3" |'''第１０話：消えていく光 Scenario 10 - The Fading Light'''
| class="fc-route4" |'''第１０話：グッバイ・フレンズ Scenario 10 - Goodbye, Friends'''

|-
|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' All allies defeated, Science Fortress Lab destroyed '''Skill Point:''' Clear the map without the Science Fortress Lab taking damage '''Secret Requirements:''' '''Unit Acquisition:'''
*Raioh loses the "System LIOH" ability
*Raioh gains the "Rising Meteor" attack
*Dygenguar (Sanger)
*Huckebein Mk-III Trombe (Ratsel)

|'''Victory Condition:''' (1) Sanger is defeated; (2)(3) Defeat all enemies; (4)(5) ZX-02 is defeated '''Defeat Condition:''' (1) Bullet is defeated; (2) Sanger or Rastel are defeated; (3) Any ally is defeated; (4) Guy, Sanger, or Rastel are defeated; (5) Guy, J, Sanger, or Rastel are defeated '''Skill Point:''' Reduce Shin RyuOuKi to below 10000 HP within 3 turns of its arrival '''Secret Requirements:''' '''Unit Acquisition:'''
*Dygenguar (Sanger)
*Huckebein Mk-III Trombe (Ratsel)
*GaiGar (Guy)
*GaoGaiGar (Guy)
*Mic Sounders XIII (Mic Sounders XIII)
*Goldymarg (Goldymarg)
*HyoRyu (HyoRyu)
*EnRyu (Enryu)
*Volfogg (Volfogg)
*Great Mazinger (Tetsuya)
*Venus A (Jun)
*Boss Borot (Boss, Mucha, Nuke)
*Kotetsu Jeeg (Jeeg)
*Big Shooter (Miwa)
*Stealth Gao II parts for GaoGaiGar
*Gunbot parts for Volfogg

|'''Victory Condition:''' (1) Reduce the Blitz Gundam to under 7000HP; (2) The Gamow is defeated; (3) The Gamow is defeated and Imperial Guard are defeated '''Defeat Condition:''' (1)(2) Any ally is defeated; (3) Ally battleship is defeated '''Skill Point:''' Defeat the Gamow (retreats at 4000HP (E) / 6000HP (N) / 8000HP (H)) '''Secret Requirements:''' '''Unit Acquisition:'''
*Qubeley Mk-II (Puru)
*Qubeley Mk-II (Puru Two)
*Hyaku Shiki (Beecha)
*Gundam Mk-II (Elle)
*Jegan (Mondo)
*Megarider (Iino)
*YF-19 (Isamu)
*YF-21 (Guld)

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' (1) Any ally is defeated; (2) Ally battleship is defeated; (3) Ally battleship is defeated, Isamu or Guld are defeated '''Skill Point:''' Clear the map in 6 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Zeta Gundam (Kamille)
*Methuss (Fa)
*ReGZ (Four)
*Super Gundam (Emma)
*Archangel (Murrue, Natarle)
*Strike Gundam (Kira)
*Mobius Zero (Mwu)
*Aile, Sword, and Launcher Striker packs for Strike Gundam
*Wing Gundam Zero Kai (Heero)
*Gundam Sandrock Kai (Quatre)
*Gundam Deathscythe Hell Kai (Duo)
*Taurus (Hilde)
*ZZ Gundam (Judau)
*ReGZ BWS (Roux)
*Qubeley Mk-II (Puru)
*Qubeley Mk-II (Puru Two)
*Hyaku Shiki (Beecha)
*Gundam Mk-II (Elle)
*Jegan (Mondo)
*Megarider (Iino)
*YF-19 (Isamu)
*YF-21 (Guld)

|-
| class="fc-route1" |'''第１１話：戦場の邂合、そして決別 Scenario 11 - An Battlefield Encounter, and Then a Departure'''
| class="fc-route2" |'''第１１話：新たなる人類 Scenario 11 - A New Mankind'''
| class="fc-route3" |'''第１１話：君と戦場で Scenario 11 - On the Battlefield with You'''
| class="fc-route4" |'''第１１話：パワー・ジャンクション Scenario 11 - Power Junction'''

|-
|'''Victory Condition:''' (1) Defeat all enemies; (2) Defeat Vesalius '''Defeat Condition:''' Ally battleship is defeated, Kira or Mwu are defeated '''Skill Point:''' Defeat all enemies in 7 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Archangel (Murrue, Natarle)
*Strike Gundam (Kira)
*Moebius Zero (Mwu)
*Stealth Gao II Parts for GaoGaiGar
*Aile, Sword, and Launcher Striker packs for Strike Gundam

|'''Victory Condition:''' (1) Defeat all enemies; (2) Vesalius is defeated '''Defeat Condition:''' (1) Ally battleship is defeated, Kira or Mwu are defeated; (2) Ally battleship is defeated '''Skill Point:''' Defeat all enemies in 7 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Strike Gundam (Kira)
*Mobeius Zero (Mwu)
*Archangel (Murrue, Natarle)
*YF-19 (Isamu)
*YF-21 (Guld)
*Aile, Sword, and Launcher Striker packs for Strike Gundam

|'''Victory Condition:''' (1) Defeat all enemies (2) ZX-02 is defeated '''Defeat Condition:''' (1) Kira is defeated; (2) Any ally is defeated '''Skill Point:''' Defeat all enemies in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Wildburger (Arado)
*Great Mazinger (Tetsuya)
*Venus A (Jun)
*Boss Borot (Boss)
*Dancouga (Shinobu, Sarah, Masato, Ryo)
*Raideen (Akira)
*Bluegar (Jingunji)
*Mazinger Z (Kouji)
*Diana A (Sayaka)
*Getter Robo G (Ryoma, Hayato, Benkei)
*Lady Command (Michiru)
*Star Gaogaigar (Gai)
*Goldymarg (Goldymarg)
*Mic Sounders the 13th (Mic)
*Hyoryu (Hyoryu)
*Enryu (Enryu
*Big Volfogg (Volfogg)

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Defeat all enemies in 7 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Ra Cailum (Bright, Torres)
*Great Mazinger (Tetsuya)
*Venus A (Jun)
*Boss Borot (Boss)
*Dancouga (Shinobu, Sarah, Masato, Ryo)
*Raideen (Akira)
*Bluegar (Jingunji)
*Mazinger Z (Kouji)
*Diana A (Sayaka)
*Getter Robo G (Ryoma, Hayato, Benkei)
*Lady Command (Michiru)
*Star Gaogaigar (Gai)
*Goldymarg (Goldymarg)
*Mic Sounders the 13th (Mic)
*Hyoryu (Hyoryu)
*Enryu (Enryu
*Big Volfogg (Volfogg)

|-
| class="fc-route1" |'''第１２話：守るべきモノ Scenario 12 - What You Must Protect'''
| class="fc-route2" |'''第１２話：別れの宇宙 Scenario 12 - Farewells in Space'''
| class="fc-route3" |'''第１２話：ディーンの火 Scenario 12 - The Flames of Deen'''
| class="fc-route4" |'''第１２話：コンクルージョン Scenario 12 - Conclusion'''

|-
|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' All enemies defeated '''Skill Point:''' Defeat all enemies in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Gundam Wing Zero (Heero)
*Gundam Deathscythe Hell Kai (Duo)
*Gundam Sandrock Kai (Quatre)
*Gundam Heavyarms Kai (Trowa)
*Altron Gundam (Wufei)
*Taurus (Hilde)
*Zeta Gundam (Kamille)
*Re-GZ BWS (Four)
*Methuss (Fa)
*Gundam Mk-II (Emma)
*ZZ Gundam (Judau)
*Qubeley Mk-II (Puru)
*Qubeley Mk-II (Puru Two)
*Hyaku Shiki (Beecha)
*Gundam Mk-II (Elle)
*Jegan (Mondo)
*Megarider (Iino)
*YF-19 (Isamu) (After stage)
*YF-21 (Guld) (After stage)
*G Defensor parts for Gundam Mk-II

|'''Victory Condition:''' (1) Defeat all enemies; (2) Defeat Shin RyoOhKi; (3) Defeat the Imperial Guard '''Defeat Condition:''' (1)(2) Any ally is defeated; (3) Ally battleship is defeated '''Skill Point:''' Defeat Shin RyuOhKi before Victory Conditions are met '''Secret Requirements:''' '''Unit Acquisition:'''
*Gundam Wing Zero Kai (Heero)
*Gundam Deathscythe Hell Kai (Duo)
*Gundam Sandrock Kai (Quatre)
*Gundam Heavyarms Kai (Trowa)
*Altron Gundam (Wufei)
*Taurus (Hilde)
*Zeta Gundam (Kamille)
*Re-GZ BWS (Four)
*Methuss (Fa)
*Gundam Mk-II (Emma)
*ZZ Gundam (Judau)
*Qubeley Mk-II (Puru)
*Qubeley Mk-II (Puru Two)
*Hyaku Shiki (Beecha)
*Gundam Mk-II (Elle)
*Jegan (Mondo)
*Megarider (Iino)
*G Defensor parts for Gundam Mk-II

|'''Victory Condition:''' (1) Bramble, Magnum, and Zangaioh are defeated; (2) Defeat all enemies; (3) Defeat Valk Baal '''Defeat Condition:''' (1) Ally battleship is defeated, Arado is defeated; (2) Cobray, Arado or Seolla are defeated; (3) Cobray, Viletta, Sanger, or Rastel are defeated '''Skill Point:''' Clear the map in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Werkbau gains the "Axion Buster" attack
*Gundam Heavyarms Kai (Trowa)
*Altron Gundam (Wufei)
*Dygenguar (Sanger)
*Huckebein Mk-III Trombe (Ratsel)
*R-GUN Powered (Viletta)

|'''Victory Condition:''' (1)(2) ZX-08 is defeated; (3) Varuch Ishar is defeated '''Defeat Condition:''' (1) Ally battleship is defeated, (2) Ally battleship is defeated, J is defeated; (3) Ally battleships is defeated, Selena, Viletta, Sanger, or Rastel are defeated '''Skill Point:''' Defeat ZX-02 in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*J-ARK (J, Tomoro)
*R-GUN Powered (Viletta)
*Dygenguar (Sanger)
*Huckebein Mk-III Trombe (Ratsel)
*Vegalion (Slay)

|-
| colspan="4" class="fc-std-sc" |'''第１３話：もう一度、自らの足で Scenario 13 - Once Again, On Your Feet'''

|-
| colspan="4" |'''Victory Condition:''' ZX-06 is defeated '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Clear the map in 6 turns; Defeat all other enemies before ZX-06 '''Secret Requirements:''' '''Unit Acquisition:'''
*Evangelion Unit 0 Custom (Rei)
*Evangelion Unit 1 (Shinji)
*Evangelion Unit 2 (Asuka)

|-
| colspan="4" class="fc-std-sc" |'''第１４話：オペレーション・ハルパー Scenario 14 - Operation Harper'''

|-
| colspan="4" |'''Victory Condition:''' Reduce Hermoz Ehad's HP to below 120000HP (E) / 90000HP (N) / 80000HP (H) '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Achieve the victory condition in 7 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*HyoRyu (HyoRyu)
*EnRyu (EnRyu)

|-
| colspan="4" class="fc-std-sc" |'''第１５話：遥かなる凱歌 Scenario 15 - A Faroff Victory Song'''

|-
| colspan="4" |'''Victory Condition:''' Defeat the Combine Primeval '''Defeat Condition:''' Ally Battleship is defeated, J is defeated '''Skill Point:''' Defeat all enemies in 7 turns, leaving the combined Primeval for last '''Secret Requirements:''' '''Unit Acquisition:'''
*J-Ark (J, Tomoro)
*ALL units are unavailable until clearing Scenario 18

|-
| colspan="4" class="fc-std-sc" |'''第１６話：導かれる魂、銀河で Scenario 16 - Souls Guided by the Galaxy'''

|-
| colspan="4" |'''Victory Condition:'''
*1st Part: Defeat all enemies
*2nd Part: Defeat all enemies
'''Defeat Condition:'''
*1st Part: Ideon is defeated
*2nd Part: Any ally is defeated
'''Skill Point:''' Defeat all enemies in 4 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Ideon (Cosmo, Kasha, Bess → Moera)
*VF-17S Nightmare (Kinryu)
*VF-17D Nightmare (Gamlin)
*VF-17D Nightmare (Docker)
*Battle 7 (Max, Exedore, Miho, Sally)
*Soloship (Bess)

|-
| colspan="4" class="fc-std-sc" |'''第１７話：ディスコード・ハーモニー Scenario 17 - Discord / Harmony'''

|-
| colspan="4" |'''Victory Condition:''' (1)(2) Defeat the Zig Mac; (3) Defeat FZ-109F Elgarthorn '''Defeat Condition:''' (1) Any ally is defeated; (2) Any ally is defeated, Zig Mac moves next to the Soloship (3) '''Skill Point:''' Meet victory the condition in 4 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Battle 7 can now transform into "Enhanced Attack Mode"
*VF-17D Nightmare (Docker)

|-
| colspan="4" class="fc-std-sc" |'''第１８話：銀河流浪 Scenario 18 - Galactic Wandering'''

|-
| colspan="4" |'''Victory Condition:'''
*1st Part: Defeat FZ-109F Elgarthorn
*2nd Part: Defeat Zig Mac
'''Defeat Condition:'''
*1st Part: Any ally is defeated
*2nd Part: Any ally is defeated
'''Skill Point:''' Meet victory conditions in 3 turns '''Secret Requirements:'''
*Duel Gundam
**Take the Earth Route
*VF-1J S Valkyrie
**Take the Earth Route
*LaGOWE
**Take the Earth Route
'''Unit Acquisition:'''
*VF-17D Nightmare (Physica)
*VF-17S (Kinryu), VF-17D (Gamlin), and VF-17D (Physica) gain the "Diamond Force Attack" combination Attack
*Ideon gains the "Omnidirectional Missile" attack
*All Ideon and Macross 7 units are lost <ul><li>Ideon (Cosmo, Kasha, Moera)</li><li>Soloship (Bess)</li><li>Battle 7 (Max, Exedore, Miho, Sally)</li><li>VF-17S Nightmare (Kinryu)</li><li>VF-17D Nightmare (Physica)</li><li>VF-17D Nightmare (Gamlin)</li>

|}
 

==Stages 19 - 33==
{| width="100%"
|- class="fc-route-h"
| width="50%" |'''Descend to Earth''' Gundam 0083 Gundam Z ZZ Gundam Char's CounterAttack Gundam Wing Gundam SEED Macross 7 Macross Plus Evangelion
| width="50%" |'''Mount a Lunar offensive''' GaoGaiGar Ideon Mazinger (Z, Great) Getter Robo Steel Jeeg Combattler V Gaiking Raideen Dancouga GoShogun

|-
| class="fc-route1" |'''第１９話：宇宙に降る星 Scenario 19 - Stars Falling in Space'''
| class="fc-route3" |'''第１９話：悪夢への招待状 Scenario 19 - A Written Invitation to a Nightmare'''

|-
|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated, Kira is defeated '''Skill Point:''' Destroy all enemies in 6 turns '''Secret Requirements:'''
*Duel Gundam
**Destroy Yzak.
'''Unit Acquisition:'''
*Nu Gundam (Amuro)
*Jegan (Katz)
*MP Nu Gundam (Kayra)
*Incom and Fin Funnel parts for MP Nu Gundam
*Kira unlocks the SEED pilot skill
*Skygrasper
*Ra Cailum (Bright, Torres)

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Destroy the Muge battleship in 6 turns (retreats at 6000HP (E) / 8000HP (N) / 10000 HP (H)) '''Secret Requirements:''' 
'''Unit Acquisition:'''
*Daiku Maryu (Pete, Midori)
*Gaiking (Sanshiro)
*Skylar (Fan Li)
*Bazolar (Yamagatake)
*Nesser (Bunta)

|-
| class="fc-route1" |'''第２０話：強襲、砂漠の虎 Scenario 20 - Assault of the Desert Tiger'''
| class="fc-route3" |'''第２０話：異邦人達の帰還 Scenario 20 - The Foreigners Return'''

|-
|'''Victory Condition:''' Defeat the Lesseps '''Defeat Condition:''' Ally battleship is defeated, Kira is defeated '''Skill Point:''' Defeat the Lesseps in 6 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Kira unlocks the SEED pilot skill
*Albion (Synapse, Paserov)
*Gundam Stamen (Kou)
*GM Cannon II (Keith)
*GM Custom (Burning)
*GM Custom (Bate)
*GM Custom (Monsha)
*GM Cannon II (Adel)
*Gundam GP01fb
*Armed Base Orchis parts for Gundam Stamen

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Destroy Helmut's Muge battleship in 4 turns (retreats at 6000HP (E) / 8000HP (N) / 10000 HP(H)) '''Secret Requirements:''' '''Unit Acquisition:'''
*Ideon (Cosmo, Kasha, Moera)
*Ideon gains the "Ideon Sword" and "Ideon Sword (MAP)" attacks
*Soloship (Bess, Hatari)

|-
| class="fc-route1" |'''第２１話：プリティ・デビル Scenario 21 - Pretty Devil'''
| class="fc-route3" |'''第２１話：裏切りの代償 Scenario 21 - The Cost of Betrayal'''

|-
|'''Victory Condition:'''
*1st Part: Gigil's ship is defeated
*2nd Part: Gigil's ship is defeated 
'''Defeat Condition:'''
*1st Part: Any ally is defeated
*2nd Part: Basara is defeated
'''Skill Point:''' Destroy Gigil before he moves adjacent to Sivil '''Secret Requirements:'''
*LaGOWE
**Waltfeld and Dacosta must both survive and get a combined total of 10 kills or more on the first half of the scenario.
*VF-1J
**Milia must get a total of 10 kills in the first half of the scenario.
'''Unit Acquisition:'''
*VF-17S Nightmare (Kinryu)
*VF-17D Nightmare (Gamlin)
*VF-17D Nightmare (Physica)
*VF-1J S Valkyrie (Milia)
*LaGOWE (Waldfelt)
*BuCUE (Dacosta)
*Skygrasper (Cagalli)
*VF-19 Kai Fire Valkyrie (Basara)
*VF-17S Nighmare (Milia)
*VF-1J S Valkyrie

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Any ally is defeated '''Skill Point:''' Destroy all enemies in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Goshogun (Shingo, Killy, Remi)
*Good Thunder (Sabranth)

|-
| class="fc-route1" |'''第２２話：砂塵の果て Scenario 22 - Beyond the Clouds of Sand'''
| class="fc-route3" |'''第２２話：発動する力、無限大 Scenario 22 - Infinite Activation Power'''

|-
|'''Victory Condition:''' (1) Defeat the Lesseps; (2) Waltfeld is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated '''Skill Point:''' Defeat the Lesseps in 5 turns '''Secret Requirements:'''
*LaGOWE
**Kira must destroy Waltfeld's LaGOWE while in SEED. (Kira has to activate SEED mode before the event that ends the stage.)
'''Unit Acquisition:'''
*Kira unlocks the SEED pilot skill

|'''Victory Condition:''' (1) Soloship reaches the computer facility; (2) Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Get the Soloship to the indicated area in 4 turns without it taking any damage '''Secret Requirements:''' '''Unit Acquisition:'''
*HyoRyu (HyoRyu)
*EnRyu (EnRyu)

|-
| class="fc-route1" |'''第２３話：エモーション・ハイ Scenario 23 - Emotion High'''
| class="fc-route3" |'''第２３話：決戦！地獄の月荒野 Scenario 23 - Decisive Battle in the Hellish Lunar Wilderness!'''

|-
|'''Victory Condition:''' (1) Defeat 2 Ghosts; (2) Defeat all enemies; (3) Basara sings to Sivil, All ZAFT forces are defeated '''Defeat Condition:''' (1) Ally battleship is defeated, Battle 7 is defeated; (2) Ally battleship is defeated, Battle 7 is defeated, Isamu or Guld are defeated; (3) Ally battleship is defeated, Isamu, Guld, or Basara are defeated '''Skill Point:''' Clear the map in 9 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*YF-19's "Full Volley" attacks gains +200 Attack power
*YF-19 and YF-21 gain the "Double Pinpoint Barrier Punch" combination attack
*Battle 7 (Max, Exedore, Miho, Sally)
*VF-19 Kai Fire Valkyrie (Basara)
*Mazinkaiser
*Shin Getter Robo

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Clear the map in 9 turns '''Secret Requirements:''' '''Unit Acquisition:'''

|-
| colspan="2" class="fc-std-sc" |'''第２４話：戦神の星で Scenario 24 - On the Planet of the War God'''

|-
| colspan="2" |'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' (1) Any ally is defeated; (2) Ally battleship is defeated '''Skill Point:''' Destroy all enemies in 3 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*VF-19 Kai Fire Valkyrie (Basara)
*VF-11 MAXL Kai (Mylene)
*VF-17 Kai Nightmare (Ray, Veffidas)
*Tallgeese III (Zechs)
*Taurus (Noin)
*Voltes V (Kenichi, Ippei, Daijiroh, Hiyoshi, Megumi)
*Daimos (Kazuya)
*Garuba FX-II (Kyoshiro, Nana)

|-
| colspan="2" class="fc-std-sc" |'''第２５話：選ばれし者、選びし者 Scenario 25 - Those Who Are Chosen, Those Who Choose'''

|-
| colspan="2" |'''Victory Condition:''' (1) Hermos is defeated; (2) Zifrud is defeated '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Clear the map in 8 turns '''Secret Requirements:''' '''Unit Acquisition:'''

|-
| colspan="2" class="fc-std-sc" |'''第２６話：かりそめの旅人 Scenario 26 - Transitory Traveler'''

|-
| colspan="2" |'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated, Temjin, Fei Yen, or Apharmd are defeated '''Skill Point:''' Destroy all enemies in 3 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Temjin 747J (Chief)
*Fei Yen the Knight (Fei)
*Apharmd The Hatter (The Hatter)

|-
| colspan="2" class="fc-std-sc" |'''第２７話：勇気ある者達の誓い Scenario 27 - The Oath of the Courageous'''

|-
| colspan="2" |'''Victory Condition:'''
*1st Part: Defeat all enemies
*2nd Part: (1) Defeat all enemies; (2) Defeat the Z-Master within (10 (E) / 7 (N) / 5 (H)) turns 
'''Defeat Condition:'''
*1st Part: Ally battleship is defeated, Gai is defeated
*2nd Part: (1) Ally battleship is defeated, Gai or J are defeated; (2) (10 (E) / 7 (N) / 5 (H)) turns have passed, Ally battleship is defeated, Gai or J are defeated 
'''Skill Point:''' Destroy all enemies in 7 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*J-Ark (J, Tomoro)

|-
| colspan="2" class="fc-std-sc" |'''第２８話：いつか星の海へ Scenario 28 - Someday, In the Sea of Stars'''

|-
| colspan="2" |'''Victory Condition:''' (1)(2) Defeat the Zonder Robo; (3) Defeat the Zonder Robo within 6 attacks from Star GaoGaiGar; (4)(5) Defeat all enemies '''Defeat Condition:''' (1) Galeon is defeated; (2) Ally battleship is defeated, Galeon is defeated; (3) Ally battleship or Gai are defeated, Zonder Robo is not defeated within 6 attacks from Star GaoGaiGar (4) Main Character is defeated; (5) Ally battleship is defeated '''Skill Point:''' Destroy the Zonuder Robo in 5 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Galeon (Galeon)
*Star GaoGaiGar/GaoGaiGar (Gai)
*YF-19 (Isamu)
*YF-21 (Guld)
*Battle 7 (Max)
*VF-17S Nightmare (Milia)
*VF-17D Nightmare (Gamlin)
*VF-17D Nightmare (Physica)
*VF-19 Kai Fire Valkyrie (Basara)
*VF-11 MAXL Kai (Mylene)
*VF-17 Kai Nightmare (Ray, Veffidas)
*HyoRyu (HyoRyu)
*EnRyu (EnRyu)
*Goldymarg (Goldymarg)
*Volfogg (Volfogg)
*Mic Sounders XIII (Mic Sounder XIII)
*Ideon (Cosmo, Kasha, Moera)
*Soloship (Bess, Hatari)
*Star GaoGaiGar (Guy, Choryujin, Goldymarg, Mic, Volfogg)
*Dygenguar (Sanger)
*Aussenseiter (Ratsel)
*R-Blade Custom (Ryusei)
*R-Gun Powered (Viletta)

|-
| colspan="2" class="fc-std-sc" |'''第２９話：押された烙印 Scenario 29 - Branded with the Mark'''

|-
| colspan="2" |'''Victory Condition:''' (1)(2) Defeat all enemies '''Defeat Condition:''' (1) Ally battleship is defeated; (2) Ally battleship is defeated, Cagalli is defeated '''Skill Point:''' Destroy all enemies in 6 turns '''Secret Requirements:'''
*Destroid Monster
**Take the Space Route
*FBz-99G
**Take the Space Route
*Strike Rouge IWSP
**Cagalli must have 30 or more kills by the end of this stage.
***Take the Alaska Route
*Duel Gundam
**Take the Alaska Route
'''Unit Acquisition:'''
*GaoFighGar (Guy)
*HyoRyu (HyoRyu)
*EnRyu (EnRyu)
*Goldymarg (Goldymarg)
*Volfogg (Volfogg)/Big Volfogg (Big Volfogg)
*Mic Sounders XIII (Mic Sounders XIII)
*AnRyu (AnRyu)
*KouRyu (KouRyu)
*Ra Cailum (Bright, Torres)

|- class="fc-route-h"
|'''Head to Alaska''' Gundam (0083, Z, ZZ, CCA, Wing, SEED) Daitarn 3 Mazinger (Z, Great) Steel Jeeg Voltes V Daimos Dancouga Evangelion
|'''Go to Space''' GaoGaiGar Ideon Getter Robo Combattler V GaiKing Raideen Goshogun Macross (DYRL, 7, Plus) Virtual On

|-
| class="fc-route2" |'''第３０話：終わらない閃光 Scenario 30 - Unending Flashes of Light'''
| class="fc-route4" |'''第３０話：ロスト・ディーヴァ Scenario 30 - Lost Diva'''

|-
|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated, Kira is defeated '''Skill Point:''' Clear the map in 7 turns '''Secret Requirements:'''
*Strike Rouge IWSP
**Mwu must defeat Dearka
**After the event, Kira must defeat Athrun while both are in SEED.
'''Unit Acquisition:'''
*Skygrasper (Cagalli)
*Strike Gundam (Kira)
*Kira unlocks the SEED pilot skill
*Cagalli unlocks the SEED pilot skill (needs verification)
*Archangel loses Natarle as a subpilot

|'''Victory Condition:''' (1)(2) Defeat all enemies '''Defeat Condition:''' (1) Any ally is defeated: (2) Ally battleship is defeated, Fire Bomber, Diamond Force, or Skull Squadron are defeated '''Skill Point:''' In 6 turns, destroy Glavil and Gavil. You must destroy Glavil before Gavil '''Secret Requirements:'''
*Gavil and FBz-99G Zaubergeran
**Gamlin must defeat Gavil
'''Unit Acquisition:'''
*YF-19 (Isamu) (Before Deploying)
*YF-21 (Guld) (Before Deploying)
*VF-1S S Valkyrie (Focker)
*VF-1S S Valkyrie (Hikaru)
*VF-1A S Valkyrie (Kakizaki)
*VF-17D Nightmare (Gamlin)
*VF-17D Nightmare (Physica)
*VF-19 Kai Fire Valkyrie (Basara)
*VF-11 MAXL Kai (Mylene)
*VF-17 Kai Nightmare (Ray, Veffidas)

|-
| class="fc-route2" |'''第３１話：青き清浄なる世界のために Scenario 31 - For Our Blue & Pure World'''
| class="fc-route4" |'''第３１話：禁断の惑星へ Scenario 31 - To the Forbidden Planet'''

|-
|'''Victory Condition:''' (1) Defeat all enemies; (2)(3) Defeat all Mobile Dolls, All ZAFT Units retreat '''Defeat Condition:''' (1)(2) Ally battleship is defeated, Heero is defeated; (3) Ally battleship is defeated '''Skill Point:''' Do not let a single ZAFT machine get shot down '''Secret Requirements:'''
*Duel Gundam
**Yzak must survive the scenario.
'''Unit Acquisition:'''
*Archangel gains Newman as a subpilot
*Freedom Gundam (Kira)
*Daitarn 3 (Banjo)
*Black Wing (Alan)

|'''Victory Condition:'''
*1st Part: Defeat all enemies
*2nd Part: Defeat Gepelnitch
'''Defeat Condition:'''
*1st Part: Any ally is defeated
*2nd Part: Ally battleship is defeated, Basara or Gamlin are defeated
'''Skill Point:''' In 7 turns, destroy Glavil and Gavil and make Gepelnitch's ship retreat (at 50,000 HP) '''Secret Requirements:'''
*Destroid Monster
**Get the Skill Point on this stage.
*Gavil and FBz-99G Zaubergeran
**Gamlin must defeat Gavil 
'''Unit Acquisition:'''
*Destroid Monster

|-
| class="fc-route2" |'''第３２話：守護神の巫女 Scenario 32 - Priestess of the Guardian God'''
| class="fc-route4" |'''第３２話：インフィニティ・ソウル Scenario 32 - Infinity Soul'''

|-
|'''Victory Condition:''' (1)(2) Defeat all enemies '''Defeat Condition:''' Any Ally is defeated; Ally battleship is defeated, Sanger or Rastel are defeated '''Skill Point:''' In 5 turns, destroy the General of Hell or Flora. '''Secret Requirements:''' '''Unit Acquisition:'''
*Dygenguar (Sanger)
*Assenseiter (Ratsel)

|'''Victory Condition:''' (1) Valgo is defeated; (2)(3) Defeat all enemies '''Defeat Condition:''' (1) Mylene, Ray, or Gamlin are defeated; (2) Basara, Mylene, Ray, or Gamlin are defeated; (3) Ideon is defeated '''Skill Point:''' In 6 turns, destroy Valgo '''Secret Requirements:'''
*Gavil and FBz-99G Zaubergeran
**Gamlin must defeat Gavil 
'''Unit Acquisition:'''
*VF-17D Nightmare → VF-17S Nightmare (Gamlin)
*VF-17D Nightmare (Docker)
**VF-17S (Gamlin), VF-17D (Physica) and VF-17D (Docker) gain the "Diamond Force Attack" combination attack
*VF-19 Kai Fire Valkyrie, VF-11 MAXL Kai, and VF-17 Kai Nightmare gain the "Sound Booster" mech ability
**All VF-19 Kai Fire Valkyrie SB Songs gain (MAP) and (ALL) combination attack variants when Sound Booster activates.
**All VF-11 MAXL Kai SB Songs gain (MAP) and (ALL) combination attack variants when Sound Booster activates.
*Ideon (Cosmo, Kasha, Moera)
** Ideon gains the "Ideon Sword" and "Ideon Sword (MAP)" attacks when IDE gauge is full, and HP is below 30%
*Soloship (Bess, Hatari)

|-
| class="fc-route2" |'''第３３話：暁への脱出 Scenario 33 - Escape to Daybreak'''
| class="fc-route4" |'''第３３話：受け継ぎし遺産 Scenario 33 - The Successor's Inheritance'''

|-
|'''Victory Condition:''' (1)(2) Defeat all enemies besides the Albion '''Defeat Condition:''' (1) Ally battleship is defeated, Kira, Shinobu, or Alan are defeated, Albion is defeated; (2) Kira, Shinobu, Alan, Mwu, or Cagalli are defeated '''Skill Point:''' In 8 turns, destroy all enemies except the Albion '''Secret Requirements:''' '''Unit Acquisition:'''
*Strike Gundam (Mwu)
*Strike Rouge (Cagailli)
*M1 Astray (Juri)
*M1 Astray (Mayura)
*M1 Astray (Asagi)
*Justice Gundam (Athrun)
*Buster Gundam (Dearka)
*Mazinger Z gains the "Giant Swing Rocket Punch" attack
*Great Mazinger gains the "Great Booster" attack
*Koutetsu Jeeg stats are enhanced and can transform into Jeeg Panzeroid
*Dancouga and Black Wing can combine into Final Dancouga.

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated, Akira or Jinguji are defeated '''Skill Point:''' In 8 turns, destroy Etzira, Valgo, Glavil, Gabro Zan, and Gije '''Secret Requirements:''' '''Unit Acquisition:'''
*VF-1A S Valkyrie (Kakizaki)
*Raideen gains the Mutron Open mech ability
*Ideon (Cosmo, Kasha, Moera)
*Soloship (Bess, Hatari)
*Battle 7 (Max, Exedore, Miho, Sally)
*VF-1S S Valkyrie (Fokker)
*VF-1S S Valkyrie (Hikaru)
*VF-1A S Valkyrie (Kakizaki)
*YF-19 (Isamu)
*YF-21 (Guld)
*VF-19 Kai Fire Valkyrie (Basara)
*VF-11 MAXL Kai (Mylene)
*VF-17 Kai Nightmare (Ray, Veffidas)
*VF-17S Nightmare (Gamlin)
*VF-17D Nightmare (Physica)
*VF-17D Nightmare (Docker)

|}
 

==Stages 34 - 44==
{| width="100%"
|- class="fc-route-h"
| width="25%" |'''Touma Route'''
| width="25%" |'''Kusuha Route'''
| width="25%" |'''Cobray Route'''
| width="25%" |'''Selena Route'''

|-
| class="fc-route1" |'''第３４話：武人の心、その意味 Scenario 34 - Why a Warrior Fights'''
| class="fc-route2" |'''第３４話：怒りの強念者 Scenario 34 - The Wrath of a Esper'''
| class="fc-route3" |'''第３４話：虚ろな魂の捕囚 Scenario 34 - Captivity of the Hollow Soul'''
| class="fc-route4" |'''第３４話：ベトレイヤー Scenario 34 - Betrayer'''

|-
|'''Victory Condition:'''
*1st Part: (1)(2) Defeat all enemies
*2nd Part: Bemidoban is defeated 
'''Defeat Condition:'''
*1st Part: (1) Ally battleship is defeated; (2) Ally battleship is defeated, Touma is defeated
*2nd Part: Touma is defeated
'''Skill Point:''' Defeat all enemies within 6 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Raioh (Touma)
*Mazinger Z, Great Mazinger and Getter Dragon gain the "F Dynamic Special" combination attack

|'''Victory Condition:'''(1)(2) Shin RyuOhKi is defeated; (3)(4) Bemidoban and Shmuel are defeated '''Defeat Condition:''' (1) Any ally is defeated; (2) Kusuha is defeated; (3) Kusuha is defeated, Ally battleship is defeated; (4) Ally battleship is defeated '''Skill Point:''' Destroy the Bemidoban (retreats (8000 (E) / 10000 (N) / 12000 (H)) HP) '''Secret Requirements:''' '''Unit Acquisition:'''
*Mazinger Z, Great Mazinger and Getter Dragon gain the "F Dynamic Special" combination attack
*Dygenguar (Sanger)
*Aussenseiter (Ratsel)

|'''Victory Condition:''' Shin RyuOhKi is defeated '''Defeat Condition:''' Ally battleship is defeated, Cobray, Arad, or Seolla are defeated '''Skill Point:''' Defeat Shin RyuOuKi within 6 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Werkbau (Cobray)
*Mazinger Z, Great Mazinger and Getter Dragon gain the "F Dynamic Special" combination attack

|'''Victory Condition:''' (1) Shmuel is defeated; (2)(3) Bemidoban defeated Shin RyuOhKi '''Defeat Condition:''' (1) Selena is defeated; (2) Ally battleship is defeated, Selena is defeated; (3) Ally battleship is defeated '''Skill Point:''' Bemidoban and Shin RyuOuKi shot down. Both flee when below (8000 (E) / 10000 (N) / 12000 (H)) HP. '''Secret Requirements:''' '''Unit Acquisition:'''
*Mazinger Z, Great Mazinger and Getter Dragon gain the "F Dynamic Special" combination attack
*Alterion (CF) (Ibis, Tsugumi)
*AS Soleares (Selena, Elma) is unavailable during the intermission

|-
| class="fc-route1" |'''第３５話：闘志、誰がために Scenario 35 - For Whom the Fighting Spirit Burns'''
| class="fc-route2" |'''第３５話：魂、久遠に Scenario 35 - The Soul, Into Eternity'''
| class="fc-route3" |'''第３５話：THE GUN OF DIS Scenario 35 - THE GUN OF DIS'''
| class="fc-route4" |'''第３５話：クロージング・ハート Scenario 35 - Closing Heart'''

|-
|'''Victory Condition:''' (1)(2) Defeat all enemies '''Defeat Condition:''' (1) Touma is defeated; (2) Ally battleship is defeated, Touma, Sanger, or Rastel are defeated '''Skill Point:''' Defeat all enemies within 4 turns of allied reinforcements arriving. '''Secret Requirements:''' '''Unit Acquisition:'''
*DaiRaioh(Touma)
*Dygenguar (Sanger)
*Aussenseiter (Ratsel)

|'''Victory Condition:''' (1)(2)(3) Shin RyuOhKi is defeated '''Defeat Condition:''' (1) Kusuha or Bullet are defeated; (2) Kusuha is defeated; (3) Ally battleship is defeated, Kusuha is defeated '''Skill Point:''' Destroy Shin RyuOhKi within 6 turns of Varuch Ben and Ishar's arrival, destroying them first. '''Secret Requirements:''' '''Unit Acquisition:'''
*GouRyu Kai (Kusuha)
*Raiko Kai (Bullet)
*Shin RyuKoOh (Kusuha, Bullet)
*Dygenguar (Sanger)
*Aussenseiter (Ratsel)

|'''Victory Condition:''' (1)(2) Bemidoban or Shmuel are defeated; (3) ??? is defeated; (4) Valk Baal is defeated '''Defeat Condition:''' (1) Cobray is defeated, (2)(3)(4) Ally battleship is defeated, Cobray is defeated '''Skill Point:''' Defeat the Bemidoban within 5 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Varuch Ben (Cobray)
*Dis Astranagant (Cobray)

|'''Victory Condition:''' (1)(2) Defeat all enemies '''Defeat Condition:''' (1) Selena is defeated; (2) Ally battleship is defeated '''Skill Point:''' Map cleared within 7 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Eslim (Selena)
*Alterion (CF) replaces Tsugumi with Slay as a Subpilot

|-
| colspan="4" class="fc-std-sc" |'''第３６話：激突！勇者VS勇者！ Scenario 36 - Clash! Brave vs. Brave!'''

|-
| colspan="4" |'''Victory Condition:'''
*1st Part: Defeat all enemies
*2nd Part: Ally battleship is defeated
'''Defeat Condition:'''
*1st Part: Star GaoGaiGar is defeated
*2nd Part: Gai is defeated
'''Skill Point:''' Defeat all enemies within 6 turns. '''Secret Requirements:'''
*EVA-01 F-Type Equipment
**Shinji must defeat Ramiel on the first part of this scenario.
*Early Nu Gundam HWS
**Amuro must have 60 or more kills by the end of the scenario.
*GP-02A
**Burning, Monsha, Bate, and Adel must have a combined killcount of 100 or more by the end of the scenario.
*Nuclear Bazooka
**Meet the requirements for GP-02A
*Black Getter
**Michiru must have 20 kills or more by the end of the scenario.
'''Unit Acquisition:'''
*Gundam GP02
*Megarider
*Re-GZ BWS
*MP Nu Gundam
*Black Getter
*VF-1S S Valkyrie (Fokker)
*VF-1S S Valkyrie (Hikaru)
*VF-1A S Valkyrie (Kakizaki)
*VF-1J S Valkyrie
*YF-19 (Isamu)
*YF-21 (Guld)
*Battle 7 (Max)
*VF-19 Kai Fire Valkyrie (Basara)
*VF-11 MAXL Kai (Mylene)
*VF-17 Kai Nightmare (Ray)
*VF-17S Nightmare (Gamlin)
*VF-17D Nightmare (Physica)
*VF-17D Nightmare (Docker
*Soloship (Bess, Hatari)
*Ideon (Cosmo, Kasha, Moera)

|-
| colspan="4" class="fc-std-sc" |'''第３７話：果て無き旅路の始まり Scenario 37 - The Beginning of an Unending Journey'''

|-
| colspan="4" |'''Victory Condition:''' (1) Defeat all enemies; (2)(3) Devariim is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated; (3) Ally battleship is defeated, Bundle, Cutnall, or Kernagul are defeated
'''Skill Point:''' All enemies destroyed within 6 turns, with Devariim being last. '''Secret Requirements:''' '''Unit Acquisition:'''
*Heavy Weapons System parts for Nu Gundam
*Evangelion Unit 0 Custom gains the "N2 Mine" MAP attack
*Evangelion Unit 1 gains the "Magoroku E Sword" attack
*Gunbuster (Noriko)
*Sizzler Black (Jung)
*Eltrium (Tashiro, Deputy Chief)
*Bundle Ship (Bundle)
*Cutnall Ship (Cutnall)
*Kernagul Ship (Kernagul)

|- class="fc-route-h"
| colspan="2" |'''Go with the Soloship''' Gundam (0083, Zeta, ZZ, CCA, Wing, SEED) Getter Robo Raideen Daitarn 3 Evangelion Ideon GaoGaiGar
| colspan="2" |'''Go with the Battle 7''' Mazinger (Z, Great) Macross (DYRL, 7, Plus) Steel Jeeg Combattler V Voltes V Gunbuster Daimos Gaiking Goshogun Dancouga Virtual On

|-
| colspan="2" class="fc-route1" |'''第３８話：運命の炎の中で Scenario 38 - Within the Fires of Destiny'''
| colspan="2" class="fc-route3" |'''第３８話：戦火は星の瞬きと Scenario 38 - The Fires of War Among the Twinkling Stars'''

|-
| colspan="2" |'''Victory Condition:'''
*1st Part: Enemy Battleship is defeated
*2nd Part: (1) Defeat all enemies; (2) Dalam's Ship is defeated
'''Defeat Condition:'''
*1st Part: Ally battleship is defeated, Ideon is defeated
*2nd Part: (1) Ally battleship is defeated; (2) Ally battleship is defeated, Cosmo is defeated
'''Skill Point:''' Clear the map within 7 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Ideon loses Moera as a subpilot
*Ideon gains the "Ideon Gun" attack

| colspan="2" |'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Defeat all enemies within 6 turns. '''Secret Requirements:''' '''Unit Acquisition:'''

|-
| colspan="2" class="fc-route1" |'''第３９話：果てに待つもの Scenario 39 - What Awaits at the End'''
| colspan="2" class="fc-route3" |'''第３９話：ただ母星のために Scenario 39 - All for the Motherworld'''

|-
| colspan="2" |'''Victory Condition:''' (1)(2)Gabro Zan is defeated '''Defeat Condition:''' (1) Ally battleship is defeated, Ryouma, Hayato, Benkei, or Michiru are defeated; (2) Ally battleship is defeated, Ryouma, Hayato, Benkei, or Cosmo are defeated '''Skill Point:''' Destroy all Buff Clan ships within 8 turns, saving Gabro Zan for last. '''Secret Requirements:''' '''Unit Acquisition:'''
* Ideon gains Gije as a subpilot
* Shin Getter-1 gains the "Shin Shine Spark" attack

| colspan="2" |'''Victory Condition:''' Heinel is defeated '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Within 7 turns, defeat all enemies, then defeat Heinel and Richter (Richter must be defeated before Heinel) '''Secret Requirements:''' '''Unit Acquisition:'''

*Goshogun gains the "GoFlasher Special" attack

|-
| colspan="2" class="fc-route1" |'''第４０話：勇者王、最後の刻！ Scenario 40 - The King of Brave’s Final Hour!'''
| colspan="2" class="fc-route3" |'''第４０話：勇気、果つる時… Scenario 40 - When Courage Fails...'''

|-
| colspan="2" |'''Victory Condition:'''
*1st Part: Defeat all enemies
*2nd Part: Ally battleship is defeated
'''Defeat Condition:'''
*1st Part: Defeat all enemies
*2nd Part: Gai is defeated
'''Skill Point:''' Defeat all enemies within 6 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*All GaoGaiGar units are lost

| colspan="2" |'''Victory Condition:''' (1)(2)(3) Defeat all enemies '''Defeat Condition:''' (1) Gai is defeated; (2) Ally battleship is defeated, Gai is defeated; (3) Ally battleship is defeated '''Skill Point:''' Defeat all enemies within 7 turns, with Palparepa Plus being the last one. '''Secret Requirements:''' '''Unit Acquisition:'''
*GaoFighGar (Gai)
*All GaoGaiGar units are lost

|-
| colspan="4" class="fc-std-sc" |'''第４１話：銀河が消滅する日 Scenario 41 - The Day the Galaxy is Extinguished'''

|-
| colspan="4" |'''Victory Condition:''' (1) Defeat all enemies; (2) GaoFighGar is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated, J is defeated '''Skill Point:''' GaoFighGar shot down by turn 7. '''Secret Requirements:'''
*Gije & Ganga Rube
**When given the option, choose to meet the opponent's challenge (first option).
'''Unit Acquisition:'''
*J-Ark (J, Tomoro)
|-
| colspan="4" class="fc-std-sc" |'''第４２話：超勇者黙示録 Scenario 42 - The Super Brave Apocalypse'''

|-
| colspan="4" |'''Victory Condition:'''
*1st Part: Defeat all enemies
*2nd Part: Genesis GaoGaiGar reaches the designated point in 4 turns
'''Defeat Condition:'''
*1st Part: Gai or J are defeated
*2nd Part: Ally battleship is defeated, Gai is defeated, 5th turn is reached
'''Skill Point:''' All enemies shot down by turn 7. '''Secret Requirements:'''
* J-Phoenix & Renais (Sub Pilot)
**Have J defeat Pia Decem on the first part of the stage. Defeat Pia Decem again to gain the attack.
'''Unit Acquisition:'''
* King J-der gains the "J-Phoenix" attack, and gains Renais as a sub-pilot
**Koryuu and Anryuu lose the "Renais Support Attack" attacks
*Genesic GaoGaiGar (Gai)
*J-Ark (J, Tomoro)
** Renais also is a sub-pilot if the conditions are met in the first part of the stage
*Goldymarg (Goldymarg)
*Big Volfogg (Volfogg)
*TenRyuJin (TenRyuJin)
*KoRyu (KoRyu)
*AnRyu (AnRyu)
*EnRyu (EnRyu)
*HyoRyu (HyoRyu)
*Mic Sounder XIII (Mic Sounder XIII)

|- class="fc-route-h"
|'''Touma Route'''
|'''Kusuha Route'''
|'''Cobray Route'''
|'''Selena Route'''

|-
| class="fc-route1" |'''第４３話：閉ざされた世界で Scenario 43 - In a Closed-Off World'''
| class="fc-route2" |'''第４３話：真の龍神 Scenario 43 - The True Dragon God'''
| class="fc-route3" |'''第４３話：人形たちの宴 Scenario 43 - The Doll’s Banquet'''
| class="fc-route4" |'''第４３話：サイレント・クライ Scenario 43 - Silent Cry'''

|-
|'''Victory Condition:'''
*1st Part: (1) Defeat all enemies; (2) Vaikran is defeated, Houle is defeated
*2nd Part: Baran is defeated
'''Defeat Condition:'''
*1st Part: (1) Ally battleship is defeated, Touma or Ryusei are defeated; (2) Ally battleship is defeated, Ryusei is defeated
*2nd Part: Touma is defeated
'''Skill Point:''' Defeat the Bemidoban within 5 turns. '''Secret Requirements:''' '''Unit Acquisition:'''

|'''Victory Condition:''' (1) Defeat Shin RyuOhKi; (2) Vaikran is defeated, Houle is defeated '''Defeat Condition:''' (1) Kusuha or Ryusei are defeated; (2) Ally battleship is defeated, Ryusei is defeated '''Skill Point:''' Defeat Shin RyuOhKi within 5 turns. '''Secret Requirements:''' '''Unit Acquisition:'''

|'''Victory Condition:'''
*1st Part: (1) Defeat all enemies; (2) Vaikran is defeated, Houle is defeated
*2nd Part: Valk Baal is defeated
'''Defeat Condition:'''
*1st Part: (1)(2) Ally battleship is defeated, Ryusei is defeated
*2nd Part: Cobray is defeated
'''Skill Point:''' Defeat the Bemidoban within 5 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Dis Astranagant (Cobray) is unavailable during the intermission

|'''Victory Condition:''' (1) Defeat all enemies; (2)(3) Vaikran is defeated, Houle is defeated'''Defeat Condition:''' (1)(2) Ally battleship is defeated, Selena, Ibis, or Ryusei are defeated (3) Ryusei is defeated'''Skill Point:''' Defeat the Bemidoban within 5 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*AS Alegrias (Selena, Elma?) Is unavailable until the next stage

|-
| class="fc-route1" |'''第４４話：闘志、未来のために Scenario 44 - Fighting Spirit, for the Future'''
| class="fc-route2" |'''第４４話：四神招魂、ここに Scenario 44 - The Four Gods Souls, Gather Here'''
| class="fc-route3" |'''第４４話：鋼の戦神 Scenario 44 - The Steel War God'''
| class="fc-route4" |'''第４４話：マイホーム・マイフレンズ Scenario 44 - My Home, My Friends'''

|-
|'''Victory Condition:'''
*1st Part: Vaikran is defeated
*2nd Part: (1)(2) Vaikran is defeated
'''Defeat Condition:'''
*1st Part: Ally battleship is defeated, Ryusei is defeated
*2nd Part: (1) Touma or Lyria are defeated; (2) Touma, Baran, or Lyria are defeated
'''Skill Point:''' Destroy the Vaikran within 5 turns. '''Secret Requirements:'''
*VF-19F Excaliburs
**Max must have a total of 60 or more kills by the end of the scenario, if you do not pick the Go to Varauta route.
*Gije & Ganga Rube
**You must pick the Go To Bozoan Route.
'''Unit Acquisition:'''
* DaiRaioh gains the "Jinrai" attack 
*Banpreios (Ryuusei, Rai, Mai)
*Dygenguar (Sanger)
*Aussenseiter (Ratsel)
*Shumel (Lyria)
*Bemidoban (Baran)

|'''Victory Condition:'''
*1st Part: Vaikran is defeated
*2nd Part: (1)(2) Vaikran is defeated
'''Defeat Condition:'''
*1st Part: Kusuha or Ryusei are defeated
*2nd Part: (1) Ally battleship is defeated, Kusuha is defeated; (2) Kusuha, Bullet, or Lyria are defeated
'''Skill Point:''' Destroy the Vaikran within 5 turns. '''Secret Requirements:'''
*VF-19F Excaliburs
**Max must have a total of 60 or more kills by the end of the scenario, if you do not pick the Go to Varauta route.
*Gije & Ganga Rube
**You must pick the Go To Bozoan Route.
'''Unit Acquisition:'''
*Banpreios (Ryuusei, Rai, Mai)
*Dygenguar (Sanger)
*Aussenseiter (Ratsel)
*Shumel (Lyria)
*Shin RyuKoOh can now transform into Shin KoRyuOh

|'''Victory Condition:'''
*1st Part: (1) Defeat all enemies; (2) Vaikran is defeated
*2nd Part: Defeat all enemies
'''Defeat Condition:'''
*1st Part: (1)(2) Ally battleship is defeated, Ryusei, Arad or Seola are defeated
*2nd Part: Ally battleship is defeated, Cobray or Lyria are defeated
'''Skill Point:''' Destroy the Vaikran within 3 turns of its arrival. '''Secret Requirements:'''
*VF-19F Excaliburs
**Max must have a total of 60 or more kills by the end of the scenario, if you do not pick the Go to Varauta route.
*Gije & Ganga Rube
**You must pick the Go To Bozoan Route.
'''Unit Acquisition:'''
*Dis Astranagant (Cobray)
*Banpreios (Ryuusei, Rai, Mai)
*Dygenguar (Sanger)
*Aussenseiter (Ratsel)
*Shumel (Lyria)

|'''Victory Condition:'''
*1st Part: (1) Valk Isher is defeated; (2) Vaikran is defeated
*2nd Part: (1)(2) Vaikran is defeated
'''Defeat Condition:'''
*1st Part: (1)(2) Ally battleship is defeated, Ryusei or Ibis are defeated
*2nd Part: (1) Ally battleship is defeated, Selena, Ibis, or Lyria are defeated; (2) Selena or Lyria are defeated
'''Skill Point:''' Destroy the Vaikran within 3 turns of its arrival. '''Secret Requirements:'''
*VF-19F Excaliburs
**Max must have a total of 60 or more kills by the end of the scenario, if you do not pick the Go to Varauta route.
*Gije & Ganga Rube
**You must pick the Go To Bozoan Route.
'''Unit Acquisition:'''
*Banpreios (Ryuusei, Rai, Mai)
*Dygenguar (Sanger)
*Aussenseiter (Ratsel)
*Shumel (Lyria)
*Alterion (CF) replaces Slay with Tsugumi as a subpilot
*Vegalion (Slay)
**Alterion (CF) and Vegalion can combine into Hyperion

|}
 

==Stages 45 - 48==
{| width="100%"
|- class="fc-route-h"
| colspan="2" |'''Go to Earth'''
| colspan="2" |'''Go to Space'''

|- class="fc-route-h"
| width="25%" |'''Search for Irui''' Mazinger (Z, Great) Getter Robo Kotetsu Jeeg Gaiking Dancouga
| width="25%" |'''Fight against ZAFT''' Gundam (0083, Z, ZZ, CCA) Gundam Wing Gundam SEED Evangelion
| width="25%" |'''Go to Varauta''' Macross (DYRL, 7, Plus) GoShogun Daitarn 3 Gunbuster
| width="25%" |'''Go to Boazan''' Ideon Combattler V Voltes V Daimos Raideen GaoGaiGar Virtual On

|-
| class="fc-route1" |'''第４５話：とらわれの心、叫ぶ時 Scenario 45 - When the Captive Heart Cries Out'''
| class="fc-route2" |'''第４５話：忍び寄る終焉 Scenario 45 - Creeping Death'''
| class="fc-route3" |'''第４５話：悪夢の突入作戦 Scenario 45 - Charging into a Nightmare'''
| class="fc-route4" |'''第４５話：もう一つの母星ボアザン Scenario 45 - Another Mother Planet - Boazan'''

|-
|'''Victory Condition:''' (1) Defeat all enemies: (2) Legion is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated '''Skill Point:''' Defeat all enemies within 7 turns '''Secret Requirements:'''
'''Unit Acquisition:'''

|'''Victory Condition:''' (1) Defeat all enemies; (2) All Angels are defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated, Shinji, Asuka, or Rei are defeated '''Skill Point:''' Defeat all enemies within 5 turns. '''Secret Requirements:'''
*Early Nu Gundam HWS
**If you did not receive it on Scenario 37, Amuro must have 60 or more kills by the end of the scenario.
*EVA-01 F-Type Equipment(optional)
**Shinji must defeat Armisael.
*Neue Ziel
**Kou must have 40 or more kills than Keith by the end of the scenario.
*Val Varo
**Keith must have 20 or more kills than Kou by the end of the scenario.
*Gerbera Tetra
**Kou and Keith's killcounts must be within 6 of one another by the end of the scenario.
*Quin Mantha
**The sum of Ple and Ple 2's killcounts must be a number ending in 5 at the end of the scenario.
*Haman's Qubeley
**The sum of Ple and Ple 2's killcounts must be a number ending in 0 at the end of the scenario.
*MP Qubeleys
**The sum of Ple and Ple 2's killcounts must be a number ending in 7 at the end of the scenario.
*Doven Wolf
**The sum of Beecha and Mondo's killcounts must be a number ending in 0 at the end of the scenario.
*Geymalk
**The sum of Beecha and Mondo's killcounts must be a number ending in 5 at the end of the scenario.
*Strike Rouge IWSP
**The sum of Cagalli, Julie, Mayura, and Asagi's killcounts must be 100 or more by the end of the scenario.
*Early Full Armor ZZ Gundam
**Judau, Mondo, Beecha, Elle, Roux, and Iino's combined killcounts must be greater than 115 by the end of this scenario.
'''Unit Acquisition:'''
*Neue Ziel OR Val Varo OR Gerbera Tetra
*Quin Mantha OR Haman's Qubeley OR Mass Production Qubeley (x2)
*Doven Wolf OR Geymalk
*Strike Rougue IWSP
*Heavy Weapon System for Nu Gundam
*Full Armor Parts for ZZ Gundam
*Evangelion Unit 2 gains the "A.T. Field" attack
*Evangelion Unit 0 Custom gains the "Lance of Longinus" attack

|'''Victory Condition:'''
*1st Part: All allies reach the designated point, aside Battle 7
*2nd Part: Any ally reaches the designated point
'''Defeat Condition:'''
*1st Part: Any ally is defeated
*2nd Part: Any ally is defeated
'''Skill Point:''' Defeat all enemies before moving a unit to the target area. '''Secret Requirements:'''
'''Unit Acquisition:'''
*The following all gain the "Large Anti-Ship Reaction Missile" attack
**VF-1S S Valkyrie (Focker), VF-1S S Valkyrie (Hikaru), VF-1A S Valkyrie (Kakizaki)
**VF-17S Nightmare (Gamlin), VF-17D Nightmare (Docker), VF-17D Nightmare (Physica)
**YF-19 (Isamu), YF-21 (Guld)

|'''Victory Condition:''' Zartan is defeated '''Defeat Condition:''' Any ally is defeated '''Skill Point:''' Destroy all other enemies before destroying Zaltan. '''Secret Requirements:'''
'''Unit Acquisition:'''
*Voltes V is unavailable during the intermission
*Daimos is unavailable during the intermission

|-
| class="fc-route1" |'''第４６話：さらば父よ、戦士達の旅立ち Scenario 46 - Farewell, Father! The Warriors Depart'''
| class="fc-route2" |'''第４６話：永遠を信じて Scenario 46 - Believe in Eternity'''
| class="fc-route3" |'''第４６話：野望の第４惑星 Scenario 46 - The Fourth Planet of Ambition'''
| class="fc-route4" |'''第４６話：崩れゆく邪悪の塔 Scenario 46 - The Collapsing Tower of Evil'''

|-
|'''Victory Condition:''' (1) Steel Jeeg persuades Flora; (2) Defeat Yamata no Orochi, Demonica, and the Dragon Ship; (3) '''Defeat Condition:''' (1) Flora is defeated, Ally battleship is defeated, Kouji, Tetsuya, or Steel Jeeg are defeated; (2) Yamata no Orochi reaches the designated point, Ally battleship is defeated, Kouji, Tetsuya or Steel Jeeg are defeated '''Skill Point:''' Destroy Ryuuma and the Grand Marshall of Hell within 8 turns. '''Secret Requirements:'''
*Minmei's Disc
**Move Boss's squad onto either 'Hut' tile on the beach, and you will pick up the item
'''Unit Acquisition:'''
*Mazinkaizer gains the "Kaizer Nova" attack and Flight (S Rank in Air)

|'''Victory Condition:''' (1)(2) Defeat all enemies; (3) The Dominion withdraws '''Defeat Condition:''' (1) Any ally is defeated; (2)(3) Ally battleship is defeated, Kira or Athrun are defeated '''Skill Point:''' Destroy the Dominion (retreats at (10000HP (E) / 15000HP (N)/20000HP (H)) '''Secret Requirements:''' '''Unit Acquisition:'''
*Eternal (Lacus, Andrew)
*BuCUE
*METEOR parts for Freedom Gundam
*METEOR parts for Justice Gundam
*LaGOWE

|'''Victory Condition:''' (1) Guide all enemies east past the designated line; (2) All allies reach the escape point '''Defeat Condition:''' (1) Any ally is defeated, Any enemy is defeated; (2) Any ally is defeated '''Skill Point:''' Clear the map by defeating all enemies within 8 turns of the victory condition change '''Secret Requirements:'''
*VF-19F Excaliburs
**Max must get 15 or more kills on this scenario.
'''Unit Acquisition:'''
*VF-22S Sturmvogel II (Max)
*FBz-99G Zaubergeran (Gamlin)
*VF-19 Kai Fire Valkyrie gains the song "TRY AGAIN"
**VF-19 Kai Fire Valkyrie, VF-11 MAXL Kai, and VF-17 Kai Nightmare gain the "TRY AGAIN" (MAP) and (ALL) combination attack

|'''Victory Condition:''' (1) None; (2) Warchimedes is defeated; (3) Janera is defeated '''Defeat Condition:''' (1) Any friendly unit is defeated, Voltes V or Daimos are defeated; (2)(3) Ally battleship is defeated, Hyouma, Ken'ichi, Kazuya, or Heinel are defeated '''Skill Point:''' Destroy all enemies and finish the stage within 10 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Combattler V, Voltes V, and Daimos gain the "Choudenji SeiKenZuki" combination attack

|-
| class="fc-route1" |'''第４７話：神になろうとした男 Scenario 47 - The Man Who Tried to Become a God'''
| class="fc-route2" |'''第４７話：ヒトの見た夢 Scenario 47 - The Dream People Saw'''
| class="fc-route3" |'''第４７話：大宇宙の意志 Scenario 47 - The Will of the Universe'''
| class="fc-route4" |'''第４７話：因果の海で Scenario 47 - In the Sea of Causality'''

|-
|'''Victory Condition:''' (1) Defeat all enemies; (2) Shapiro is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated '''Skill Point:''' Destroy Shapiro within 6 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Gaiking and Daiku Maryuu gain the "Giant Cutter Upside-down Slash" combination attack

|'''Victory Condition:''' (1)(2)(3) Defeat all enemies; '''Defeat Condition:''' (1) Ally battleship is defeated, Kira, Mwu, or Dearka are defeated; (2) Kira is defeated; (3) The Vesalius is defeated '''Skill Point:''' Orga, Clotho and Shani shot down before Fllay reaches the Dominion. '''Secret Requirements:''' '''Unit Acquisition:'''

|'''Victory Condition:''' (1)(2)(3) Defeat all enemies '''Defeat Condition:''' (1) Any ally is defeated; (2) Ally battleship is defeated, Bundle is defeated; (3) Ally battleship is defeated, Bundle, Gamlin, or Mylene are defeated '''Skill Point:''' Destroy all SMTC units within 5 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*VF-19S Excalibur (before deployment)
*VF-19F Excalibur (x2) (before deployment)
*Bundle's Ship (Bundle, Cutnal, Kernagul)

|'''Victory Condition:'''
*1st and 2nd Part: Defeat all enemies within (5 (E) / 4 (N) / 3 (H)) turns
*3rd and 4th Part: Defeat all enemies within (4 (E) / 3 (N) / 2 (H)) turns
*5th Part: Defeat all enemies within (8 (E) / 7 (N) / 6 (H)) turns
'''Defeat Condition:'''
*1st and 2nd Part: Ally battleship is defeated, Turn (6 (E) / 5 (N) / 4 (H)) is reached
*3rd and 4th Part: Ally battleship is defeated, Turn (5 (E) / 4 (N) / 3 (H)) is reached
*5th Part: Ally battleship is defeated, Turn (9 (E) / 8 (N) / 7 (H)) is reached
'''Skill Point:''' During the 5th Part: Shoot down the two Gataman Zans before the Gabro Zan '''Secret Requirements:''' '''Unit Acquisition:'''

|-
| colspan="2" class="fc-route1" |'''第４８話：失われた者たちへの鎮魂歌 Scenario 48 - Requiem for the Lost'''
| colspan="2" class="fc-route4" |'''第４８話：銀河に死す Scenario 48 - To Die in the Galaxy'''

|-
| colspan="2" |'''Victory Condition:''' (1) Deathgaia, Gildrome, and Helmut are defeated; (2) Mute Zalbados is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated '''Skill Point:''' Defeat all enemies within 6 turns after Muge Zalbados appears, then defeat Muge Zalbados '''Secret Requirements:'''
*Early Nu Gundam HWS
**If you did not receive it on Scenario 37 or 45, Amuro must have 60 or more kills by the end of the scenario.
'''Unit Acquisition:'''

| colspan="2" |'''Victory Condition:''' (1) Defeat all enemies; (2) Gollum or Zomd are defeated; (3) Defeat all enemies; (4) Gabro Zan is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated, Basara is defeated; (3)(4) Ally battleship is defeated, Ideon is defeated '''Skill Point:''' Destroy GaviGla (retreats at 8000HP (E) / 10000HP (N) / 12000HP (H)) '''Secret Requirements:'''
*Early Nu Gundam HWS
**If you did not receive it on Scenario 37 or 45, Amuro must have 60 or more kills by the end of the scenario.
*Gije & Ganga Rube
**The Ide Gauge must reach level 5 during this scenario.
'''Unit Acquisition:'''
*Ideon replaces Gije with Dek as a Subpilot
*Battle 7 gains the "Large Anti-Ship Reaction Missile" attack
*VF-19 Kai Fire Valkyrie (Basara) is unavailable during the intermission

|}
 

==Stages 49 - 58==
{| width="100%"
|-
| colspan="3" class="fc-std-sc" |'''第４９話：銀河に響く歌声 Scenario 49 - Songs Resounding Through the Galaxy'''

|-
| colspan="3" |'''Victory Condition:'''
*1st Part: Defeat all enemies, In 5 turns Battle 7 reaches the designated point
*2nd Part: (1) In 6 turns, Battle 7 reaches the designated point; (2)(3)(4) Gepelnitch is defeated
'''Defeat Condition:'''
*1st Part: Ally battleship is defeated, Battle 7 doesn't reach the designated point by turn 6
*2nd Part: (1) Ally battleship is defeated, Mylene or Ray are defeated, Battle 7 doesn't reach the designated point by turn 7; (2) Ally battleship is defeated, Ray is defeated; (3) Ally battleship is defeated, Basara, Mylene, or Ray are defeated; (4) Ally battleship is defeated, Basara, Mylene, Ray, or Sybil are defeated
'''Skill Point:''' GaviGla is defeated (in the 1st part) '''Secret Requirements:'''
*Gavil and FBz-99G Zaubergeran
**If Gamlin has over 50 kills, Gamlin must defeat GaviGla during the first half of the scenario. During the second half of the scenario, do not defeat Gavil.
'''Unit Acquisition:'''
*VF-22S Sturmvogel II (Max)
*VF-22S Sturmvogel II (Milia)
*Sybil (Sybil)
**VF-19 Kai Fire Valkyrie, VF-11 MAXL Kai, and VF-17 Kai Nightmare, and Sybil gain the "TRY AGAIN" combination attack
*FBz-99G Zaubergeran (Gavil)

|-
| colspan="3" class="fc-std-sc" |'''第５０話：二つの門と二つの星 Scenario 50 - Two Gates, Two Stars'''

|-
| colspan="3" |'''Victory Condition:''' (1) Hermodr Echad is defeated; (2) Zfield is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated '''Skill Point:''' Destroy the Hermodr Echad within 5 turns. '''Secret Requirements:'''
*Duel Gundam & Yzak
**Dearka's killcount must be 50 or more by the end of the scenario.
'''Unit Acquisition:'''

|-
| colspan="3" class="fc-std-sc" |'''第５１話：終わらない明日へ Scenario 51 - To an Unending Tomorrow'''

|-
| colspan="3" |'''Victory Condition:'''
*1st Part: (1) Destroy all nuclear missiles; (2) Dominion is defeated & Athrun reaches the designated point
*2nd Part: Destroy the Genesis reactor within 4 turns
'''Defeat Condition:'''
*1st Part: (1) Any missile reaches the end of the map, Ally battleship is defeated, Kira, Athrun or Cagalli are defeated; (2) Ally battleship is defeated, Kira, Athrun or Cagalli are defeated
*2nd Part: Kira is defeated, reach the 5th turn
'''Skill Point:''' Destroy the Providence Gundam (in the 2nd part) '''Secret Requirements:'''
*Duel Gundam & Yzak
**During the first half of the scenario, destroy all of the nukes, then have Dearka battle with Yzak
**Both must survive the first half of the scenario
'''Unit Acquisition:'''
*Cagalli and Lacus unlock the SEED pilot skill
*Duel Gundam (Yzak) (can join permanently)

|-
| colspan="3" class="fc-std-sc" |'''第５２話：世界の中心でアイを叫んだもの Scenario 52 - The One Who Cried "Love" at the Heart of the World'''

|-
| colspan="3" |'''Victory Condition:'''
*1st Part: (1)(2)(3) Defeat all enemies (4)(5) EVA Unit 1 is defeated
*2nd Part: EVA Unit 1 is defeated
'''Defeat Condition:'''
*1st Part: (1) Any ally is defeated; (2) Shinji is defeated; (3)(4) Ally battleship is defeated; (5) Ally battleship is defeated, Reach the 6th turn after the "Cross" grows from the Earth
*2nd Part: Shinji is defeated
'''Skill Point:''' Asuka survives for 2 full turns. '''Secret Requirements:'''
*Neue Ziel
**Kou must have 40 or more kills than Keith by the end of the scenario.
*Val Varo
**Keith must have 20 or more kills than Kou by the end of the scenario.
*Gerbera Tetra
**Kou and Keith's killcounts must be within 6 of one another by the end of the scenario.
*Quin Mantha
**The sum of Ple and Ple 2's killcounts must be a number ending in 5 at the end of the scenario.
*Haman's Qubeley
**The sum of Ple and Ple 2's killcounts must be a number ending in 0 at the end of the scenario.
*MP Qubeleys
**The sum of Ple and Ple 2's killcounts must be a number ending in 7 at the end of the scenario.
*Doven Wolf
**The sum of Beecha and Mondo's killcounts must be a number ending in 0 at the end of the scenario.
*Geymalk
**The sum of Beecha and Mondo's killcounts must be a number ending in 5 at the end of the scenario.
*EVA-01 F-Type Equipment
**Shinji must defeat Zeruel on the first part of this scenario.
**Shinji must defeat EVA-01 on the second part of this scenario.
**The sum of Shinji, Asuka, and Rei's killcounts must be 250 or more, or 150 or more if you met the requirement on scenario 45.
*Hi-Nu Gundam
**Amuro and Bright's combined killcounts must be greater than 120 by the end of this scenario.
*Sazabi
**Amuro and Kamille's killcount must be 50 or more each at the end of this scenario. You will receive it at the start of next scenario.
*Strike Rouge IWSP
**If you did not receive it on Scenario 45, the sum of Cagalli, Julie, Mayura, and Asagi's killcounts must be 100 or more by the end of the scenario.
*Destroid Monster
**If you did not receive it on Scenario 31, the sum of Fokker, Hikaru, and Kakizaki's killcounts must be 100 or more by the end of this scenario.
'''Unit Acquisition:'''
*Evangelion Unit 0 (Kaowru)
*Evangelion Unit 0 loses the "Lance of Longinus" attack

|-
| colspan="3" class="fc-prologue" |'''Beyond this point, losing Ideon results in a Game Over'''
|-
| colspan="3" class="fc-std-sc" |'''第５３話：出航！銀河殴り込み艦隊！ Scenario 53 - The Galactic Assault Fleet Takes Sail!'''

|-
| colspan="3" |'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' 230 enemy units shot down by turn 7. '''Secret Requirements:''' '''Unit Acquisition:'''
*All secret units and parts are given after the stage begins <ul><li>Neue Ziel OR Val Varo OR Gerbera Tetra</li><li>Quin Mantha OR Haman's Qubeley OR Mass Production Qubeley (x2)</li><li>Doven Wolf OR Geymalk</li><li>Strike Rougue IWSP</li><li>Hi-Nu Gundam</li><li>Sazabi</li><li>Destroid Monster</li><li>F-Type Equipment for Evangelion Unit 1</li><li>Atomic Bazooka parts for GP-02</li><li>Heavy Weapon System for Nu Gundam</li></ul>
* Full Armor modular parts for Gundam ZZ
** If the secret requirements were not met earlier
*MP Nu Gundam
**Fin Funnel parts for MP Nu Gundam
*Gunbuster adds Kazumi as a Subpilot
**Gunbuster gains the "Super Inazuma Kick" attack
*Ra Cailum gains the "Nuclear Missile" MAP and ALL attacks

|-
| colspan="3" class="fc-std-sc" |'''第５４話：神に守られし星 Scenario 54 - The Planet Guarded by the Gods'''

|-
| colspan="3" |'''Victory Condition:'''
*1st Part: (1) Defeat all enemies; (2) The SRX Team rescues [https://akurasu.net/wiki/Super_Robot_Wars/Alpha_3/Info_Dump#Finding_Aya_on_Scenario_54 Aya]; (3) Jumora is defeated
*2nd Part: Bemidoban is defeated
'''Defeat Condition:'''
*1st Part: (1)(2) Ally battleship is defeated, Ryusei or Viletta are defeated; (3) Ally battleship is defeated, Ryusei, Viletta, Baran, or Lyria are defeated
*2nd Part: Sanger is defeated
**2nd Part (Touma Route): Touma is defeated
'''Skill Point:''' Clear the map within 10 turns, with both Hermoz defeated '''Secret Requirements:''' '''Unit Acquisition:'''
*Banpreios adds Aya as a Subpilot
**Branpreios gains the "Tenjou Tenge Nendou Musou-ken" attack
**Branpreios and R-GUN Powered gain the "Tenjou Tenge Ichigeki Hissatsu-ho" combination attack
*Shumel (Lyria)
*Bemidoban (Baran)

|-
| colspan="3" class="fc-std-sc" |'''第５５話：まつろわぬ神 Scenario 55 - The God Who Resists Order'''

|-
| colspan="3" |'''Victory Condition:'''
*1st Part: (1) Defeat all enemies; (2) Defeat Gebel GanEden
*2nd Part: (1) Defeat all enemies; (2) Defeat Gebel GanEden
'''Defeat Condition:'''
*1st Part: (1)(2) Ally battleship is defeated
*2nd Part: (1)(2) Ally battleship is defeated
'''Skill Point:''' Within 6 turns, defeat both Zfiruds '''Secret Requirements:''' '''Unit Acquisition:'''

|-
| colspan="3" class="fc-std-sc" |'''第５６話：終わりなき総力戦 Scenario 56 - Unending Total War'''

|-
| colspan="3" |'''Victory Condition:'''
*1st Part: Drowa Zan is defeated within 5 turns
*2nd Part: (1) Soloship move next to the Bairal Jinn; (2) Any unit reaches the designated point
'''Defeat Condition:'''
*1st Part: Ally battleship is defeated, 6th turn is reached
*2nd Part: (1)(2) Ally battleship is defeated
'''Skill Point:''' Clear the map within 7 turns. '''Secret Requirements:'''
*Gije & Ganga Rube
**You must pick the Fight The Buff Clan option at the end of the scenario.
*Bad Ending Route
**On New Game+, choose to fight (first option)
'''Unit Acquisition:'''

|- class="fc-route-h"
| width="40%" |'''Fight The Buff Clan''' Ideon, Getter Robo Combattler V, Voltes V, Daimos Daitarn 3 Gundam (0083, Zeta, ZZ, CCA, Wing, SEED)
| width="40%" |'''Fight The STMC''' Mazinger (Z, Great), Steel Jeeg, Raiden Goshogun, Dancouga, Gaiking Macross (DYRL, Plus, 7) Gunbuster, Evangelion, GaoGaiGar Virtual On
| width="20%" |'''Bad Ending '''

|-
| class="fc-route1" |'''第５７話：憎しみの環の中で Scenario 57 - In a Circle of Hatred'''
| class="fc-route3" |'''第５７話：終わりの始まり Scenario 57 - The Beginning of the End'''
| class="fc-prologue" |'''イデ発動ルート最終話：銀河に君と''' '''Ide Activation Final Scenario - With You In The Galaxy'''

|-
|'''Victory Condition:'''
*1st Part: (1) Defeat all enemies; (2) Soloship reaches the designated point
*2nd Part: Defeat all enemies within (11 (E) / 9 (N) / 7 (H)) turns
'''Defeat Condition:'''
*1st Part: (1)(2) All allies are defeated
*2nd Part: Turn (12 (E) / 10 (N) / 8 (H)) is reached, Ally battleship is defeated
'''Skill Point:''' Defeat all enemies within (10 (E) / 8 (N) / 6 (H)) turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Ganga Rube (Gije)

|'''Victory Condition:''' (1)(2) Defeat all enemies '''Defeat Condition:''' (1) Eltrium is defeated; (2) Ally battleship is defeated '''Skill Point:''' Defeat all enemies within 7 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Eltrium (Tashiro, Deputy Chief)

| rowspan="4" |'''Victory Condition:''' Bairal Jinn is defeated '''Defeat Condition:''' Ally battleship is defeated '''Secret Requirements:''' '''Unit Acquisition:'''

|-
| class="fc-route1" |'''第５８話：発動 Scenario 58 - Activation'''
| class="fc-route3" |'''第５８話：死闘、未来を懸けて Scenario 58 - The Mortal Struggle for the Future'''

|-
|'''Victory Condition:'''
*1st Part: Bairal Jinn is defeated
*2nd Part: Bairal Jinn is defeated
'''Defeat Condition:'''
*1st Part: Ally battleship is defeated
*2nd Part: Ally battleship is defeated
'''Skill Point:''' Destroy the Bairal Jinn within six turns. '''Secret Requirements:''' '''Unit Acquisition:'''

|'''Victory Condition:''' (1)(2) Defeat all enemies '''Defeat Condition:''' (1) Ally battleship is defeated; Drowa Zan is defeated, Ally battleship is defeated(2) '''Skill Point:''' All Buff Clan units survive the stage. '''Secret Requirements:''' '''Unit Acquisition:'''

|}
 

==Stages 59 - END==
{| width="100%"
|-
| colspan="2" class="fc-std-sc" |'''第５９話：果てしなき流れの果てに Scenario 59 - At the End of the Unending Flow'''

|-
| colspan="2" |'''Victory Condition:'''
*1st Part: Reach the 11th turn
*2nd Part: Defeat all enemies, 6th turn is reached
'''Defeat Condition:'''
*1st Part: Ally battleship is defeated, Any enemy enters the designated area
*2nd Part: Any enemy enters the designated area, Ally battleship is defeated, Noriko or Jung are defeated
'''Skill Point:''' Defeat all enemies within 5 turns. '''Secret Requirements:''' '''Unit Acquisition:'''

|- class="fc-route-h"
| width="50%" |'''Normal Ending - 56 Skill Points or less, OR turn count 421 or more'''
| width="50%" |'''Good Ending - 57 Skill Points or more AND turn count 420 or less'''

|-
| class="fc-route1" |'''最終話: 終焉の銀河 Final Scenario - A Galaxy of Death'''
| class="fc-route3" |'''最終話: 今遥か遠い彼方… Final Scenario - Now, The Faraway Yonder'''

|-
|'''Victory Condition:''' (1) ??? is destroyed; (2) Kaiser Ephres is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated '''Secret Requirements:''' '''Unit Acquisition:'''

|'''Victory Condition:''' (1) ??? is destroyed; (2)(3) Kaiser Ephres is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated; (3) Irui is defeated '''Secret Requirements:''' '''Unit Acquisition:'''
*Nashim Gan Eden (Irui)

|}

Super Robot Wars/Alpha 3/Flow Chart

2023-06-26T22:53:30Z

KomodoWork: /* Stages 01 - 18 */ Missing units from Selena Route chart (units: Strike Gundam and Archangel + Strike Gundam Module Parts) [Confirmed in playthrough]

Units and Pilots in Black join your team. 
Units and Pilots in Orange are available for that stage, then leave. 
Units and Pilots in Blue have special requirements. Check the [[../Secrets|Secrets]] page for more details. 
Units and Pilots in Red previously joined, but from this point, are rendered unusable. Those lost permanently are marked so, while others rejoin later on. 
Information in Green are upgrades for units already in your party.

==Stages 01 - 18==
{| width="100%"
|- class="fc-route-h"
| width="25%" |'''Touma Route'''
| width="25%" |'''Kusuha Route'''
| width="25%" |'''Cobray Route'''
| width="25%" |'''Selena Route'''

|-
| class="fc-route1" |'''第１話：闘志、炎に燃ゆる Scenario 1 - Within the Flames, Fighting Spirit Rises'''
| class="fc-route2" |'''第１話：出撃！鋼の龍虎 Scenario 1 - Launch! Dragon and Tiger of Steel'''
| class="fc-route3" |'''第１話：虚空からの転生 Scenario 1 - Reincarnated from the Void'''
| class="fc-route4" |'''第１話：シークレット・ミッション Scenario 1 - Secret Mission'''

|-
|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Any allied unit is defeated '''Skill Point:''' Defeat all enemies in 3 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Raioh (Touma)
*GaoGaiGar (Guy)
*Goldymarg (Goldymarg)
*HyoRyu (HyoRyu)
*EnRyu (EnRyu)

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Any allied unit is defeated '''Skill Point:''' Defeat all enemies in 2 turns '''Secret Requirements:'''
*Bullet
**You must be playing as Kusuha to recruit Bullet.
'''Unit Acquisition:'''
*Gouryu Kai (Kusuha)
*Raikou Kai (Bullet)
*Mazinkaiser (Kouji)
*Diana A (Sayaka)
*Shin Getter (Ryoma, Hayato, Benkei)
*Lady Command (Michiru)

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' (1) Werkbau is defeated; (2) Werkbau is defeated, ally battleship is defeated '''Skill Point:''' Defeat all enemies in 5 turns after enemy reinforcements show up '''Secret Requirements:'''
*Arado and Seolla
**You must be playing as Cobray to recruit Arado and Seolla.
'''Unit Acquisition:'''
*Werkbau (Cobray)
*Nu Gundam (Amuro)
*Ra Cailum (Bright, Torres)
*MP Nu Gundam (Kayra)
*Jegan (Katz)
*Incom & Funnel parts for MP Nu Gundam

|'''Victory Condition:''' (1) All enemies except Salamis Kai shot down; (2) R-Gun Powered shot down '''Defeat Condition:''' (1) Selena shot down, Salamis Kai shot down; (2) Selena shot down '''Skill Point:''' Defeat all enemies except the Salamis Kai in 4 turns '''Secret Requirements:'''
*Ibis and Slay
**You must be playing as Selena to recruit Ibis and Slay.
'''Unit Acquisition:'''
*AS Soleares (Selena, Elma)
*Albion (Synapse, Paserov)
*GP03 Dendrobium (Kou)
*GM Cannon II (Keith)
*GM Custom (Burning)
*GM Custom (Bate)
*GM Custom (Monsha)
*GM Cannon II (Adel)
*Zeta Gundam (Kamille)
*Re-GZ BWS (Four)
*Methuss (Fa)
*Super Gundam (Emma)
*Armed Fortress Orchis parts for Gundam Stamen
*G Defensor parts for Gundam Mk-II

|-
| class="fc-route1" |'''第２話: さらばGGG、さらば勇者 Scenario 2 - Farewell, GGG! Farewell, Braves!'''
| class="fc-route2" |'''第２話: 新たなる侵略者！立ち上がれV Scenario 2 - New Invaders! Rise Up, V!'''
| class="fc-route3" |'''第２話: 血の狼煙 Scenario 2 - Beacon Fire of Blood'''
| class="fc-route4" |'''第２話: フラッシュ・デイ Scenario 2 - Flash Day'''

|-
|'''Victory Condition:''' Defeat all enemies; Defeat ZX-01 '''Defeat Condition:''' Any allied unit is defeated '''Skill Point:''' Defeat the 4 Zonders in 2 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*GaoGaiGar (Guy)
*J-Der (J, Tomoro)
*Great Mazinger (Tetsuya)
*Venus A (Jun)
*Boss Borot (Boss, Nuke, Mucha)
*Kotetsu Jeeg (Jeeg)
*Big Shooter (Miwa)

|'''Victory Condition:''' (1) Defeat all enemies, (2) Defeat Dangel '''Defeat Condition:''' (1) Hyouma defeated (2) Any Allied Unit is defeated '''Skill Point:''' Defeat all enemies in 3 turns, do not lose any Federation Army squads '''Secret Requirements:''' '''Unit Acquisition:'''
*Combattler V (Hyoma, Juzo, Daisaku, Chizuru, Kosuke)
*Jegan (Federation Soldier) x 3

|'''Victory Condition:''' (1) Defeat the Magellan Kai-class Battleship (2) Defeat the Magellan Kai-class Battleship and Nuclear Missiles '''Defeat Condition:''' (1) Any ally unit is defeated (2) Nuclear Missiles reach the marked area on the map '''Skill Point:''' Defeat the enemy missiles and battleship in 7 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Clop-class (Federation Captain)
*Wildfalken (Seolla)
*MP Nu Gundam (Cobray)
*ZZ Gundam (Judau)
*Re-GZ BWS (Roux)
*Albion (Synapse, Paserov)
*GP03 Dendrobium (Kou)
*GM Cannon II (Keith)
*GM Custom (Burning)
*GM Custom (Bate)
*GM Custom (Monsha)
*GM Cannon II (Adel)
*Zeta Gundam (Kamille)
*Re-GZ BWS (Four)
*Methuss (Fa)
*Super Gundam (Emma)
*Armed Fortress Orchis parts for Gundam Stamen
*G Defensor Parts for Gundam Mk-II

|'''Victory Condition:''' Defeat any enemy battleship '''Defeat Condition:''' (1) Allied battleship is defeated; (2) Allied battleship is defeated, Selena is defeated '''Skill Point:''' Defeat the enemy battleship in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*ZZ Gundam (Judau)
*Re-GZ BWS (Roux)
*Nu Gundam (Amuro)
*Ra Cailum (Bright)
*Jegan (Katz)
*MP Nu Gundam (Keyra)
*AS Soleares (Selena, Elma)
*Incom & Funnel parts for MP Nu Gundam

|-
| colspan="4" class="fc-std-sc" |'''第３話: 逆襲！機界31原種 Scenario 3 - Counterattack! The 31 Machine Primevals!'''

|-
| colspan="4" |'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' (1) Ally battleship is defeated, One of the Machine Primevals reaches the edge of the map; (2) Ally battleship is defeated, One of the Machine Primevals reaches the edge of the map, J is defeated '''Skill Point:''' Defeat all enemies in 6 turns '''Secret Requirements:''' '''Unit Acquisition (Touma & Kusuha):'''
*J-Ark (J, Tomoro)
*Nu Gundam (Amuro)
*Ra Cailum (Bright, Torres)
*Jegan (Katz)
*MP Nu Gundam (Keyra)
*Albion (Synapse, Paserov)
*GP03 Dendrobium (Kou)
*GM Cannon II (Keith)
*GM Custom (Burning)
*GM Custom (Bate)
*GM Custom (Monsha)
*GM Cannon II (Adel)
*Zeta Gundam (Kamille)
*Re-GZ BWS (Four)
*Methuss (Fa)
*Super Gundam (Emma)
*Incom & Funnel parts for MP Nu Gundam
*Armed Fortress Orchis parts for Gundam Stamen
*G Defensor Parts for Gundam Mk-II
'''Unit Acquisition (Cobray & Selena):'''
*J-Ark (J, Tomoro)
*Mazinkaiser (Kouji)
*Diana A (Sayaka)
*Great Mazinger (Tetsuya)
*Venus A (Jun)
*Combattler V (Hyoma, Juzo, Daisaku, Chizuru, Kosuke)
*Koutetsu Jeeg (Jeeg)
*Big Shooter (Miwa)
*Shin Getter (Ryoma, Hayato, Benkei)
*Lady Command (Michiru)

|-
| colspan="4" class="fc-std-sc" |'''第４話：地獄門、開く Scenario 4 - The Gates of Hell Open'''

|-
| colspan="4" |'''Victory Condition:'''
*1st Part: Allied Battleship reaches the escape point in 5 turns, All Enemies are defeated in 5 turns
*2nd Part: Defeat all enemies
'''Defeat Condition:'''
*1st Part: Allied Battleship is defeated, Turn 6 starts
*2nd Part: SRX is defeated
'''Skill Point:''' Defeat all enemies in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*SRX (Damaged) (Ryuusei, Rai, Aya)

|-
| colspan="4" class="fc-std-sc" |'''第５話: 地球圏絶対防御線 Scenario 5 - The Earth Sphere’s Absolute Defense Line'''

|-
| colspan="4" |'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' (1) Ally battleship is defeated (2) Any allied unit is defeated '''Skill Point:''' Clear the stage in 6 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Mobieus Zero (Mwu)
*All Char's Counter Attack, Stardust Memory, and Zeta Gundam units are lost <ul><li>Nu Gundam(Amuro)</li><li>Ra Cailum (Bright, Torres)</li><li>MP Nu Gundam (Keyra)</li><li>Albion (Synapse, Paserov)</li><li>GP03 Dendrobium (Kou)</li><li>GM Cannon II (Keith)</li><li>GM Custom (Burning)</li><li>GM Custom (Bate)</li><li>GM Custom (Monsha)</li><li>GM Cannon II (Adel)</li><li>Zeta Gundam (Kamille)</li><li>Re-GZ BWS (Four)</li><li>Methuss (Fa)</li><li>Super Gundam (Emma)</li><li>Jegan (Katz)</li></ul>

|- class="fc-route-h"
|'''Touma Route''' Great Mazinger, Venus A, Boss Borot Steel Jeeg, Big Shooter
|'''Kusuha Route''' Getter Robo G, Lady Command Mazinger Z, Diana A Combattler V
|'''Cobray Route''' ZZ Gundam, ReGZ (BWS) Mobieus Zero
|'''Selena Route'''
|-
| class="fc-route1" |'''第６話：平和、遥か遠く Scenario 6 - A Faraway Peace'''
| class="fc-route2" |'''第６話：北米戦線、異常アリ Scenario 6 - Abnormalities on the North American Front'''
| class="fc-route3" |'''第６話：GUNDAM出撃 Scenario 6 - Gundam, Sortie'''
| class="fc-route4" |'''第６話：ザ・ビギニング Scenario 6 - The Beginning'''

|-
|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Any ally is defeated '''Skill Point:''' Defeat all enemies in 5 turns; Defeat the Yamata no Orochi last '''Secret Requirements:''' '''Unit Acquisition:'''
*GaiGar (Gai)
*Mic Sounders XIII (Mic Sounders XIII)

|'''Victory Condition:''' (1) Ally reaches the designated area; (2) Defeat all enemies '''Defeat Condition:''' Any ally defeated '''Skill Point:''' Reach target location without engaging in combat '''Secret Requirements:''' '''Unit Acquisition:'''
*Mazinkaiser → Mazinger Z (Kouji)
*Shin Getter Robo → Getter Robo G (Ryoma, Hayato, Benkei) 
*Dancouga (Shinobu, Sara, Masato, Ryo)

|'''Victory Condition:'''
*1st Part: Sigu is defeated, Vesalius is defeated
*2nd Part: Defeat all enemies 
'''Defeat Condition:'''
*1st Part: Any ally is defeated
*2nd Part: Any ally is defeated 
'''Skill Point:''' Accomplish either objective in 4 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Clop Class Battleship (Federation Officer)
*Wing Gundam Zero Kai (Heero)
*Gundam Deathscythe Hell Kai (Duo)
*Gundam Sandrock Kai (Quatre)
*Taurus (Hilde)
*Strike Gundam (Kira)

|'''Victory Condition:''' (1) AS Soleares reaches the designated point in 4 turns; (2) Defeat all enemies '''Defeat Condition:''' (1) Begin turn 5 without meeting victory conditions, Any ally is defeated; (2) Any ally is defeated '''Skill Point:''' Defeat all enemies in 4 turns and get the AS Soleares to the target square '''Secret Requirements:''' '''Unit Acquisition:'''
*CGUE (Rau)
*GINN (ZAFT Soldier) x 2
*Vesarius (Ades)

|-
| class="fc-route1" |'''第７話：燃えろ宙！妖花フローラの挑戦 Scenario 7 - Space Burns! The Enchanting Flora’s Challenge!'''
| class="fc-route2" |'''第７話：怒りの獣、野生の咆哮 Scenario 7 - The Wild Roar of the Raging Beast'''
| class="fc-route3" |'''第７話：崩壊の大地 Scenario 7 - Collapsing Land'''
| class="fc-route4" |'''第７話：ワンズ・ジャスティス Scenario 7 - One’s Own Justice'''

|-
|'''Victory Condition:''' 
*1st Part: Defeat all enemies
*2nd Part: Defeat all enemies
'''Defeat Condition:''' 
*1st Part: Any ally defeated
*2nd Part: Any ally defeated
'''Skill Point:''' Defeat all enemies in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*AnRyu (AnRyu)
*KouRyu (KouRyu)

|'''Victory Condition:''' (1) Defeat all enemies; (2) Defeat Dangel '''Defeat Condition:''' Any ally is defeated '''Skill Point:''' Defeat all Zubanzas, Boazan Flying Saucers, and Red Baloms within 4 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Black Wing (Alan)

|'''Victory Condition:''' (1) Defeat all enemies; (2) Archangel reaches the designated point, Defeat all enemies '''Defeat Condition:''' (1) Mwu is defeated; (2) Ally battleship is defeated, Kira or Mwu are defeated '''Skill Point:''' Defeat all enemies in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Strike Gundam (Kira)
*Archangel (Murrue, Natarle)
*Aile, Sword and Launcher Striker packs for Strike Gundam

|'''Victory Condition:''' Any ally reaches the designated point '''Defeat Condition:''' Any ally is defeated '''Skill Point:''' Defeat all enemies in 5 turns and get an allied unit to the target square '''Secret Requirements:''' '''Unit Acquisition:'''
*Altron Gundam (Wufei)
*Gundam Heavyarms Kai (Trowa)
*CGuE (Rau)
*Vesarius (Ades)
*Aegis Gundam (Athrun)
*Blitz Gundam (Nicol)
*Buster Gundam (Dearka)
*Duel Gundam (Yzak)

|-
| class="fc-route1" |'''第８話：立ち上がれ！勇気ある者達 Scenario 8 - Stand Up, People of Courage!'''
| class="fc-route2" |'''第８話：輝け！不死身の勇者 Scenario 8 - Shine, Undying Hero!'''
| class="fc-route3" |'''第８話：誘う声 Scenario 8 - An Inviting Voice'''
| class="fc-route4" |'''第８話：インビジブル・イントルーダー Scenario 8 - Invisible Intruder'''

|-
|'''Victory Condition:''' (1) Defeat all enemies; (2) ZX-02 is defeated '''Defeat Condition:''' (1) Any ally is defeated; (2) Gai is defeated, J is defeated '''Skill Point:''' Defeat all enemies in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*GaiGar → GaoGaiGar
*Mic Sounders XIII gains "Disc P", "Disc M", and "Disc X" attacks
*Goldymarg (Goldymarg)
*HyoRyu (HyoRyu)
*EnRyu (EnRyu)
*Big Volfogg (Big Volfogg)

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' (1) Any ally is defeated; (2) Akira is defeated '''Skill Point:''' Defeat the Bramble (retreats at 4000HP (E) / 6000HP (N) / 8000HP (H)) '''Secret Requirements:''' '''Unit Acquisition:'''
*Raideen (Akira)
*Bluegar (Jinguji, Mari)

|'''Victory Condition:'''
*1st Part: (1) Vesalius is defeated; (2) Defeat all enemies
*2nd Part: (1) Defeat all enemies; (2) Defeat all enemies except Valk Baal 
'''Defeat Condition:'''
*1st Part: Ally battleship is defeated, Seolla or Cobray are defeated
*2nd Part: Any ally is defeated 
'''Skill Point:''' Defeat Aegis, Duel, Buster, and Blitz Gundams in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Zeta Gundam (Kamille)
*Re-GZ BWS (Four)
*Methuss (Fa)
*Super Gundam (Emma)
*Ra Cailum (Bright, Torres)
*MP Nu Gundam (Cobray)
*Werkbau (Cobray)
*G Defensor parts for Gundam Mk-II

|'''Victory Condition:''' Reach turn 6 '''Defeat Condition:''' Any ally is defeated '''Skill Point:''' Defeat all the Jegans '''Secret Requirements:''' '''Unit Acquisition:'''
*CGuE (Rau)
*Vesarius (Ades)
*Aegis Gundam (Athrun)
*Blitz Gundam (Nicol)
*Buster Gundam (Dearka)
*Duel Gundam (Yzak)

|-
| class="fc-route1" |'''第９話：内なる修羅 Scenario 9 - Demons of War Within'''
| class="fc-route2" |'''第９話：再会！ニューヨーク解放戦 Scenario 9 - Reunion! The Battle to Retake New York'''
| class="fc-route3" |'''第９話：正義の在処 Scenario 9 - Where Justice Can Be Found'''
| class="fc-route4" |'''第９話：アベンジャー Scenario 9 - Avenger'''

|-
|'''Victory Condition:''' (1) Defeat all enemies; (2) Defeat Raioh '''Defeat Condition:''' (1) Any ally defeated; (2) Sanger is defeated '''Skill Point:''' Defeat the Bramble in 4 turns (retreats at 4000HP (E) / 6000HP (N) / 8000HP (H)) '''Secret Requirements:''' '''Unit Acquisition:'''
*Dygenguar (Sanger)
*Huckebein Mk-III Trombe (Ratsel)
*Raideen (Akira)
*Bluegar (Jingunji, Mari)
*Mazinger Z (Kouji)
**Mazinger Z (Kouji) and Great Mazinger (Tetsuya) gain the "Double Mazinger Blade" and "Double Burning Fire" combination attacks
*Diana A (Sayaka)
*Getter Robo G (Ryoma, Hayato, Benkei)
*Lady Command (Michiru)
*Combattler V (Hyoma, Juzo, Daisaku, Chizuru, Kosuke)

|'''Victory Condition:''' (1) Defeat all enemies; (2) Dancouga reaches the designated point; (3) Defeated Deathgaia, Dangel, and Warchamedes '''Defeat Condition:''' (1) Shinobu, Kusuha, or Bullet are defeated; (2) Shinobu, Kusuha, Bullet, or Alan are defeated; (3) Alan is defeated '''Skill Point:''' Clear the map in 8 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Black Wing (Alan)
*Dygenguar (Sanger)
*Huckebein Mk-III Trombe (Ratsel)

|'''Victory Condition:''' (1) Vesalius is defeated; Reduce the Muge Battleship under 2000 HP before it reaches the edge of the map '''Defeat Condition:''' (1) Ally battleship is defeated; (2) Muge Battleship reaches the western edge of the map '''Skill Point:''' Defeat all enemies before reducing the Muge Mothership's HP below 2000 or defeating it '''Secret Requirements:''' '''Unit Acquisition:'''

|'''Victory Condition:''' (1) Reduce the Archangel's HP to 50% or less, Defeat all enemies besides the Archangel; (2) Reduce the Varuch Ishar to 4000 HP or less. '''Defeat Condition:''' Any ally is defeated '''Skill Point:''' Defeat the Varuch Ishar (flees at 4000 HP) '''Secret Requirements:''' '''Unit Acquisition:'''
*CGuE (Rau)
*Vesarius (Ades)
*Aegis Gundam (Athrun)
*Blitz Gundam (Nicol)
*Buster Gundam (Dearka)
*Duel Gundam (Yzak)

|-
| class="fc-route1" |'''第１０話：激震の地底帝国 Scenario 10 - Tremors in the Underground Empire'''
| class="fc-route2" |'''第１０話：龍を喰らうもの Scenario 10 - That Which Devours the Dragon'''
| class="fc-route3" |'''第１０話：消えていく光 Scenario 10 - The Fading Light'''
| class="fc-route4" |'''第１０話：グッバイ・フレンズ Scenario 10 - Goodbye, Friends'''

|-
|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' All allies defeated, Science Fortress Lab destroyed '''Skill Point:''' Clear the map without the Science Fortress Lab taking damage '''Secret Requirements:''' '''Unit Acquisition:'''
*Raioh loses the "System LIOH" ability
*Raioh gains the "Rising Meteor" attack
*Dygenguar (Sanger)
*Huckebein Mk-III Trombe (Ratsel)

|'''Victory Condition:''' (1) Sanger is defeated; (2)(3) Defeat all enemies; (4)(5) ZX-02 is defeated '''Defeat Condition:''' (1) Bullet is defeated; (2) Sanger or Rastel are defeated; (3) Any ally is defeated; (4) Guy, Sanger, or Rastel are defeated; (5) Guy, J, Sanger, or Rastel are defeated '''Skill Point:''' Reduce Shin RyuOuKi to below 10000 HP within 3 turns of its arrival '''Secret Requirements:''' '''Unit Acquisition:'''
*Dygenguar (Sanger)
*Huckebein Mk-III Trombe (Ratsel)
*GaiGar (Guy)
*GaoGaiGar (Guy)
*Mic Sounders XIII (Mic Sounders XIII)
*Goldymarg (Goldymarg)
*HyoRyu (HyoRyu)
*EnRyu (Enryu)
*Volfogg (Volfogg)
*Great Mazinger (Tetsuya)
*Venus A (Jun)
*Boss Borot (Boss, Mucha, Nuke)
*Kotetsu Jeeg (Jeeg)
*Big Shooter (Miwa)
*Stealth Gao II parts for GaoGaiGar
*Gunbot parts for Volfogg

|'''Victory Condition:''' (1) Reduce the Blitz Gundam to under 7000HP; (2) The Gamow is defeated; (3) The Gamow is defeated and Imperial Guard are defeated '''Defeat Condition:''' (1)(2) Any ally is defeated; (3) Ally battleship is defeated '''Skill Point:''' Defeat the Gamow (retreats at 4000HP (E) / 6000HP (N) / 8000HP (H)) '''Secret Requirements:''' '''Unit Acquisition:'''
*Qubeley Mk-II (Puru)
*Qubeley Mk-II (Puru Two)
*Hyaku Shiki (Beecha)
*Gundam Mk-II (Elle)
*Jegan (Mondo)
*Megarider (Iino)
*YF-19 (Isamu)
*YF-21 (Guld)

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' (1) Any ally is defeated; (2) Ally battleship is defeated; (3) Ally battleship is defeated, Isamu or Guld are defeated '''Skill Point:''' Clear the map in 6 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Zeta Gundam (Kamille)
*Methuss (Fa)
*ReGZ (Four)
*Super Gundam (Emma)
*Archangel (Murrue, Natarle)
*Strike Gundam (Kira)
*Mobius Zero (Mwu)
*Aile, Sword, and Launcher Striker packs for Strike Gundam
*Wing Gundam Zero Kai (Heero)
*Gundam Sandrock Kai (Quatre)
*Gundam Deathscythe Hell Kai (Duo)
*Taurus (Hilde)
*ZZ Gundam (Judau)
*ReGZ BWS (Roux)
*Qubeley Mk-II (Puru)
*Qubeley Mk-II (Puru Two)
*Hyaku Shiki (Beecha)
*Gundam Mk-II (Elle)
*Jegan (Mondo)
*Megarider (Iino)
*YF-19 (Isamu)
*YF-21 (Guld)

|-
| class="fc-route1" |'''第１１話：戦場の邂合、そして決別 Scenario 11 - An Battlefield Encounter, and Then a Departure'''
| class="fc-route2" |'''第１１話：新たなる人類 Scenario 11 - A New Mankind'''
| class="fc-route3" |'''第１１話：君と戦場で Scenario 11 - On the Battlefield with You'''
| class="fc-route4" |'''第１１話：パワー・ジャンクション Scenario 11 - Power Junction'''

|-
|'''Victory Condition:''' (1) Defeat all enemies; (2) Defeat Vesalius '''Defeat Condition:''' Ally battleship is defeated, Kira or Mwu are defeated '''Skill Point:''' Defeat all enemies in 7 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Archangel (Murrue, Natarle)
*Strike Gundam (Kira)
*Moebius Zero (Mwu)
*Stealth Gao II Parts for GaoGaiGar
*Aile, Sword, and Launcher Striker packs for Strike Gundam

|'''Victory Condition:''' (1) Defeat all enemies; (2) Vesalius is defeated '''Defeat Condition:''' (1) Ally battleship is defeated, Kira or Mwu are defeated; (2) Ally battleship is defeated '''Skill Point:''' Defeat all enemies in 7 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Strike Gundam (Kira)
*Mobeius Zero (Mwu)
*Archangel (Murrue, Natarle)
*YF-19 (Isamu)
*YF-21 (Guld)
*Aile, Sword, and Launcher Striker packs for Strike Gundam

|'''Victory Condition:''' (1) Defeat all enemies (2) ZX-02 is defeated '''Defeat Condition:''' (1) Kira is defeated; (2) Any ally is defeated '''Skill Point:''' Defeat all enemies in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Wildburger (Arado)
*Great Mazinger (Tetsuya)
*Venus A (Jun)
*Boss Borot (Boss)
*Dancouga (Shinobu, Sarah, Masato, Ryo)
*Raideen (Akira)
*Bluegar (Jingunji)
*Mazinger Z (Kouji)
*Diana A (Sayaka)
*Getter Robo G (Ryoma, Hayato, Benkei)
*Lady Command (Michiru)
*Star Gaogaigar (Gai)
*Goldymarg (Goldymarg)
*Mic Sounders the 13th (Mic)
*Hyoryu (Hyoryu)
*Enryu (Enryu
*Big Volfogg (Volfogg)

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Defeat all enemies in 7 turns '''Secret Requirements:''' '''Unit Acquisition:'''

|-
| class="fc-route1" |'''第１２話：守るべきモノ Scenario 12 - What You Must Protect'''
| class="fc-route2" |'''第１２話：別れの宇宙 Scenario 12 - Farewells in Space'''
| class="fc-route3" |'''第１２話：ディーンの火 Scenario 12 - The Flames of Deen'''
| class="fc-route4" |'''第１２話：コンクルージョン Scenario 12 - Conclusion'''

|-
|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' All enemies defeated '''Skill Point:''' Defeat all enemies in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Gundam Wing Zero (Heero)
*Gundam Deathscythe Hell Kai (Duo)
*Gundam Sandrock Kai (Quatre)
*Gundam Heavyarms Kai (Trowa)
*Altron Gundam (Wufei)
*Taurus (Hilde)
*Zeta Gundam (Kamille)
*Re-GZ BWS (Four)
*Methuss (Fa)
*Gundam Mk-II (Emma)
*ZZ Gundam (Judau)
*Qubeley Mk-II (Puru)
*Qubeley Mk-II (Puru Two)
*Hyaku Shiki (Beecha)
*Gundam Mk-II (Elle)
*Jegan (Mondo)
*Megarider (Iino)
*YF-19 (Isamu) (After stage)
*YF-21 (Guld) (After stage)
*G Defensor parts for Gundam Mk-II

|'''Victory Condition:''' (1) Defeat all enemies; (2) Defeat Shin RyoOhKi; (3) Defeat the Imperial Guard '''Defeat Condition:''' (1)(2) Any ally is defeated; (3) Ally battleship is defeated '''Skill Point:''' Defeat Shin RyuOhKi before Victory Conditions are met '''Secret Requirements:''' '''Unit Acquisition:'''
*Gundam Wing Zero Kai (Heero)
*Gundam Deathscythe Hell Kai (Duo)
*Gundam Sandrock Kai (Quatre)
*Gundam Heavyarms Kai (Trowa)
*Altron Gundam (Wufei)
*Taurus (Hilde)
*Zeta Gundam (Kamille)
*Re-GZ BWS (Four)
*Methuss (Fa)
*Gundam Mk-II (Emma)
*ZZ Gundam (Judau)
*Qubeley Mk-II (Puru)
*Qubeley Mk-II (Puru Two)
*Hyaku Shiki (Beecha)
*Gundam Mk-II (Elle)
*Jegan (Mondo)
*Megarider (Iino)
*G Defensor parts for Gundam Mk-II

|'''Victory Condition:''' (1) Bramble, Magnum, and Zangaioh are defeated; (2) Defeat all enemies; (3) Defeat Valk Baal '''Defeat Condition:''' (1) Ally battleship is defeated, Arado is defeated; (2) Cobray, Arado or Seolla are defeated; (3) Cobray, Viletta, Sanger, or Rastel are defeated '''Skill Point:''' Clear the map in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Werkbau gains the "Axion Buster" attack
*Gundam Heavyarms Kai (Trowa)
*Altron Gundam (Wufei)
*Dygenguar (Sanger)
*Huckebein Mk-III Trombe (Ratsel)
*R-GUN Powered (Viletta)

|'''Victory Condition:''' (1)(2) ZX-08 is defeated; (3) Varuch Ishar is defeated '''Defeat Condition:''' (1) Ally battleship is defeated, (2) Ally battleship is defeated, J is defeated; (3) Ally battleships is defeated, Selena, Viletta, Sanger, or Rastel are defeated '''Skill Point:''' Defeat ZX-02 in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*J-ARK (J, Tomoro)
*R-GUN Powered (Viletta)
*Dygenguar (Sanger)
*Huckebein Mk-III Trombe (Ratsel)
*Vegalion (Slay)

|-
| colspan="4" class="fc-std-sc" |'''第１３話：もう一度、自らの足で Scenario 13 - Once Again, On Your Feet'''

|-
| colspan="4" |'''Victory Condition:''' ZX-06 is defeated '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Clear the map in 6 turns; Defeat all other enemies before ZX-06 '''Secret Requirements:''' '''Unit Acquisition:'''
*Evangelion Unit 0 Custom (Rei)
*Evangelion Unit 1 (Shinji)
*Evangelion Unit 2 (Asuka)

|-
| colspan="4" class="fc-std-sc" |'''第１４話：オペレーション・ハルパー Scenario 14 - Operation Harper'''

|-
| colspan="4" |'''Victory Condition:''' Reduce Hermoz Ehad's HP to below 120000HP (E) / 90000HP (N) / 80000HP (H) '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Achieve the victory condition in 7 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*HyoRyu (HyoRyu)
*EnRyu (EnRyu)

|-
| colspan="4" class="fc-std-sc" |'''第１５話：遥かなる凱歌 Scenario 15 - A Faroff Victory Song'''

|-
| colspan="4" |'''Victory Condition:''' Defeat the Combine Primeval '''Defeat Condition:''' Ally Battleship is defeated, J is defeated '''Skill Point:''' Defeat all enemies in 7 turns, leaving the combined Primeval for last '''Secret Requirements:''' '''Unit Acquisition:'''
*J-Ark (J, Tomoro)
*ALL units are unavailable until clearing Scenario 18

|-
| colspan="4" class="fc-std-sc" |'''第１６話：導かれる魂、銀河で Scenario 16 - Souls Guided by the Galaxy'''

|-
| colspan="4" |'''Victory Condition:'''
*1st Part: Defeat all enemies
*2nd Part: Defeat all enemies
'''Defeat Condition:'''
*1st Part: Ideon is defeated
*2nd Part: Any ally is defeated
'''Skill Point:''' Defeat all enemies in 4 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Ideon (Cosmo, Kasha, Bess → Moera)
*VF-17S Nightmare (Kinryu)
*VF-17D Nightmare (Gamlin)
*VF-17D Nightmare (Docker)
*Battle 7 (Max, Exedore, Miho, Sally)
*Soloship (Bess)

|-
| colspan="4" class="fc-std-sc" |'''第１７話：ディスコード・ハーモニー Scenario 17 - Discord / Harmony'''

|-
| colspan="4" |'''Victory Condition:''' (1)(2) Defeat the Zig Mac; (3) Defeat FZ-109F Elgarthorn '''Defeat Condition:''' (1) Any ally is defeated; (2) Any ally is defeated, Zig Mac moves next to the Soloship (3) '''Skill Point:''' Meet victory the condition in 4 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Battle 7 can now transform into "Enhanced Attack Mode"
*VF-17D Nightmare (Docker)

|-
| colspan="4" class="fc-std-sc" |'''第１８話：銀河流浪 Scenario 18 - Galactic Wandering'''

|-
| colspan="4" |'''Victory Condition:'''
*1st Part: Defeat FZ-109F Elgarthorn
*2nd Part: Defeat Zig Mac
'''Defeat Condition:'''
*1st Part: Any ally is defeated
*2nd Part: Any ally is defeated
'''Skill Point:''' Meet victory conditions in 3 turns '''Secret Requirements:'''
*Duel Gundam
**Take the Earth Route
*VF-1J S Valkyrie
**Take the Earth Route
*LaGOWE
**Take the Earth Route
'''Unit Acquisition:'''
*VF-17D Nightmare (Physica)
*VF-17S (Kinryu), VF-17D (Gamlin), and VF-17D (Physica) gain the "Diamond Force Attack" combination Attack
*Ideon gains the "Omnidirectional Missile" attack
*All Ideon and Macross 7 units are lost <ul><li>Ideon (Cosmo, Kasha, Moera)</li><li>Soloship (Bess)</li><li>Battle 7 (Max, Exedore, Miho, Sally)</li><li>VF-17S Nightmare (Kinryu)</li><li>VF-17D Nightmare (Physica)</li><li>VF-17D Nightmare (Gamlin)</li>

|}
 

==Stages 19 - 33==
{| width="100%"
|- class="fc-route-h"
| width="50%" |'''Descend to Earth''' Gundam 0083 Gundam Z ZZ Gundam Char's CounterAttack Gundam Wing Gundam SEED Macross 7 Macross Plus Evangelion
| width="50%" |'''Mount a Lunar offensive''' GaoGaiGar Ideon Mazinger (Z, Great) Getter Robo Steel Jeeg Combattler V Gaiking Raideen Dancouga GoShogun

|-
| class="fc-route1" |'''第１９話：宇宙に降る星 Scenario 19 - Stars Falling in Space'''
| class="fc-route3" |'''第１９話：悪夢への招待状 Scenario 19 - A Written Invitation to a Nightmare'''

|-
|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated, Kira is defeated '''Skill Point:''' Destroy all enemies in 6 turns '''Secret Requirements:'''
*Duel Gundam
**Destroy Yzak.
'''Unit Acquisition:'''
*Nu Gundam (Amuro)
*Jegan (Katz)
*MP Nu Gundam (Kayra)
*Incom and Fin Funnel parts for MP Nu Gundam
*Kira unlocks the SEED pilot skill
*Skygrasper
*Ra Cailum (Bright, Torres)

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Destroy the Muge battleship in 6 turns (retreats at 6000HP (E) / 8000HP (N) / 10000 HP (H)) '''Secret Requirements:''' 
'''Unit Acquisition:'''
*Daiku Maryu (Pete, Midori)
*Gaiking (Sanshiro)
*Skylar (Fan Li)
*Bazolar (Yamagatake)
*Nesser (Bunta)

|-
| class="fc-route1" |'''第２０話：強襲、砂漠の虎 Scenario 20 - Assault of the Desert Tiger'''
| class="fc-route3" |'''第２０話：異邦人達の帰還 Scenario 20 - The Foreigners Return'''

|-
|'''Victory Condition:''' Defeat the Lesseps '''Defeat Condition:''' Ally battleship is defeated, Kira is defeated '''Skill Point:''' Defeat the Lesseps in 6 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Kira unlocks the SEED pilot skill
*Albion (Synapse, Paserov)
*Gundam Stamen (Kou)
*GM Cannon II (Keith)
*GM Custom (Burning)
*GM Custom (Bate)
*GM Custom (Monsha)
*GM Cannon II (Adel)
*Gundam GP01fb
*Armed Base Orchis parts for Gundam Stamen

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Destroy Helmut's Muge battleship in 4 turns (retreats at 6000HP (E) / 8000HP (N) / 10000 HP(H)) '''Secret Requirements:''' '''Unit Acquisition:'''
*Ideon (Cosmo, Kasha, Moera)
*Ideon gains the "Ideon Sword" and "Ideon Sword (MAP)" attacks
*Soloship (Bess, Hatari)

|-
| class="fc-route1" |'''第２１話：プリティ・デビル Scenario 21 - Pretty Devil'''
| class="fc-route3" |'''第２１話：裏切りの代償 Scenario 21 - The Cost of Betrayal'''

|-
|'''Victory Condition:'''
*1st Part: Gigil's ship is defeated
*2nd Part: Gigil's ship is defeated 
'''Defeat Condition:'''
*1st Part: Any ally is defeated
*2nd Part: Basara is defeated
'''Skill Point:''' Destroy Gigil before he moves adjacent to Sivil '''Secret Requirements:'''
*LaGOWE
**Waltfeld and Dacosta must both survive and get a combined total of 10 kills or more on the first half of the scenario.
*VF-1J
**Milia must get a total of 10 kills in the first half of the scenario.
'''Unit Acquisition:'''
*VF-17S Nightmare (Kinryu)
*VF-17D Nightmare (Gamlin)
*VF-17D Nightmare (Physica)
*VF-1J S Valkyrie (Milia)
*LaGOWE (Waldfelt)
*BuCUE (Dacosta)
*Skygrasper (Cagalli)
*VF-19 Kai Fire Valkyrie (Basara)
*VF-17S Nighmare (Milia)
*VF-1J S Valkyrie

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Any ally is defeated '''Skill Point:''' Destroy all enemies in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Goshogun (Shingo, Killy, Remi)
*Good Thunder (Sabranth)

|-
| class="fc-route1" |'''第２２話：砂塵の果て Scenario 22 - Beyond the Clouds of Sand'''
| class="fc-route3" |'''第２２話：発動する力、無限大 Scenario 22 - Infinite Activation Power'''

|-
|'''Victory Condition:''' (1) Defeat the Lesseps; (2) Waltfeld is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated '''Skill Point:''' Defeat the Lesseps in 5 turns '''Secret Requirements:'''
*LaGOWE
**Kira must destroy Waltfeld's LaGOWE while in SEED. (Kira has to activate SEED mode before the event that ends the stage.)
'''Unit Acquisition:'''
*Kira unlocks the SEED pilot skill

|'''Victory Condition:''' (1) Soloship reaches the computer facility; (2) Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Get the Soloship to the indicated area in 4 turns without it taking any damage '''Secret Requirements:''' '''Unit Acquisition:'''
*HyoRyu (HyoRyu)
*EnRyu (EnRyu)

|-
| class="fc-route1" |'''第２３話：エモーション・ハイ Scenario 23 - Emotion High'''
| class="fc-route3" |'''第２３話：決戦！地獄の月荒野 Scenario 23 - Decisive Battle in the Hellish Lunar Wilderness!'''

|-
|'''Victory Condition:''' (1) Defeat 2 Ghosts; (2) Defeat all enemies; (3) Basara sings to Sivil, All ZAFT forces are defeated '''Defeat Condition:''' (1) Ally battleship is defeated, Battle 7 is defeated; (2) Ally battleship is defeated, Battle 7 is defeated, Isamu or Guld are defeated; (3) Ally battleship is defeated, Isamu, Guld, or Basara are defeated '''Skill Point:''' Clear the map in 9 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*YF-19's "Full Volley" attacks gains +200 Attack power
*YF-19 and YF-21 gain the "Double Pinpoint Barrier Punch" combination attack
*Battle 7 (Max, Exedore, Miho, Sally)
*VF-19 Kai Fire Valkyrie (Basara)
*Mazinkaiser
*Shin Getter Robo

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Clear the map in 9 turns '''Secret Requirements:''' '''Unit Acquisition:'''

|-
| colspan="2" class="fc-std-sc" |'''第２４話：戦神の星で Scenario 24 - On the Planet of the War God'''

|-
| colspan="2" |'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' (1) Any ally is defeated; (2) Ally battleship is defeated '''Skill Point:''' Destroy all enemies in 3 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*VF-19 Kai Fire Valkyrie (Basara)
*VF-11 MAXL Kai (Mylene)
*VF-17 Kai Nightmare (Ray, Veffidas)
*Tallgeese III (Zechs)
*Taurus (Noin)
*Voltes V (Kenichi, Ippei, Daijiroh, Hiyoshi, Megumi)
*Daimos (Kazuya)
*Garuba FX-II (Kyoshiro, Nana)

|-
| colspan="2" class="fc-std-sc" |'''第２５話：選ばれし者、選びし者 Scenario 25 - Those Who Are Chosen, Those Who Choose'''

|-
| colspan="2" |'''Victory Condition:''' (1) Hermos is defeated; (2) Zifrud is defeated '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Clear the map in 8 turns '''Secret Requirements:''' '''Unit Acquisition:'''

|-
| colspan="2" class="fc-std-sc" |'''第２６話：かりそめの旅人 Scenario 26 - Transitory Traveler'''

|-
| colspan="2" |'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated, Temjin, Fei Yen, or Apharmd are defeated '''Skill Point:''' Destroy all enemies in 3 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Temjin 747J (Chief)
*Fei Yen the Knight (Fei)
*Apharmd The Hatter (The Hatter)

|-
| colspan="2" class="fc-std-sc" |'''第２７話：勇気ある者達の誓い Scenario 27 - The Oath of the Courageous'''

|-
| colspan="2" |'''Victory Condition:'''
*1st Part: Defeat all enemies
*2nd Part: (1) Defeat all enemies; (2) Defeat the Z-Master within (10 (E) / 7 (N) / 5 (H)) turns 
'''Defeat Condition:'''
*1st Part: Ally battleship is defeated, Gai is defeated
*2nd Part: (1) Ally battleship is defeated, Gai or J are defeated; (2) (10 (E) / 7 (N) / 5 (H)) turns have passed, Ally battleship is defeated, Gai or J are defeated 
'''Skill Point:''' Destroy all enemies in 7 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*J-Ark (J, Tomoro)

|-
| colspan="2" class="fc-std-sc" |'''第２８話：いつか星の海へ Scenario 28 - Someday, In the Sea of Stars'''

|-
| colspan="2" |'''Victory Condition:''' (1)(2) Defeat the Zonder Robo; (3) Defeat the Zonder Robo within 6 attacks from Star GaoGaiGar; (4)(5) Defeat all enemies '''Defeat Condition:''' (1) Galeon is defeated; (2) Ally battleship is defeated, Galeon is defeated; (3) Ally battleship or Gai are defeated, Zonder Robo is not defeated within 6 attacks from Star GaoGaiGar (4) Main Character is defeated; (5) Ally battleship is defeated '''Skill Point:''' Destroy the Zonuder Robo in 5 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Galeon (Galeon)
*Star GaoGaiGar/GaoGaiGar (Gai)
*YF-19 (Isamu)
*YF-21 (Guld)
*Battle 7 (Max)
*VF-17S Nightmare (Milia)
*VF-17D Nightmare (Gamlin)
*VF-17D Nightmare (Physica)
*VF-19 Kai Fire Valkyrie (Basara)
*VF-11 MAXL Kai (Mylene)
*VF-17 Kai Nightmare (Ray, Veffidas)
*HyoRyu (HyoRyu)
*EnRyu (EnRyu)
*Goldymarg (Goldymarg)
*Volfogg (Volfogg)
*Mic Sounders XIII (Mic Sounder XIII)
*Ideon (Cosmo, Kasha, Moera)
*Soloship (Bess, Hatari)
*Star GaoGaiGar (Guy, Choryujin, Goldymarg, Mic, Volfogg)
*Dygenguar (Sanger)
*Aussenseiter (Ratsel)
*R-Blade Custom (Ryusei)
*R-Gun Powered (Viletta)

|-
| colspan="2" class="fc-std-sc" |'''第２９話：押された烙印 Scenario 29 - Branded with the Mark'''

|-
| colspan="2" |'''Victory Condition:''' (1)(2) Defeat all enemies '''Defeat Condition:''' (1) Ally battleship is defeated; (2) Ally battleship is defeated, Cagalli is defeated '''Skill Point:''' Destroy all enemies in 6 turns '''Secret Requirements:'''
*Destroid Monster
**Take the Space Route
*FBz-99G
**Take the Space Route
*Strike Rouge IWSP
**Cagalli must have 30 or more kills by the end of this stage.
***Take the Alaska Route
*Duel Gundam
**Take the Alaska Route
'''Unit Acquisition:'''
*GaoFighGar (Guy)
*HyoRyu (HyoRyu)
*EnRyu (EnRyu)
*Goldymarg (Goldymarg)
*Volfogg (Volfogg)/Big Volfogg (Big Volfogg)
*Mic Sounders XIII (Mic Sounders XIII)
*AnRyu (AnRyu)
*KouRyu (KouRyu)
*Ra Cailum (Bright, Torres)

|- class="fc-route-h"
|'''Head to Alaska''' Gundam (0083, Z, ZZ, CCA, Wing, SEED) Daitarn 3 Mazinger (Z, Great) Steel Jeeg Voltes V Daimos Dancouga Evangelion
|'''Go to Space''' GaoGaiGar Ideon Getter Robo Combattler V GaiKing Raideen Goshogun Macross (DYRL, 7, Plus) Virtual On

|-
| class="fc-route2" |'''第３０話：終わらない閃光 Scenario 30 - Unending Flashes of Light'''
| class="fc-route4" |'''第３０話：ロスト・ディーヴァ Scenario 30 - Lost Diva'''

|-
|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated, Kira is defeated '''Skill Point:''' Clear the map in 7 turns '''Secret Requirements:'''
*Strike Rouge IWSP
**Mwu must defeat Dearka
**After the event, Kira must defeat Athrun while both are in SEED.
'''Unit Acquisition:'''
*Skygrasper (Cagalli)
*Strike Gundam (Kira)
*Kira unlocks the SEED pilot skill
*Cagalli unlocks the SEED pilot skill (needs verification)
*Archangel loses Natarle as a subpilot

|'''Victory Condition:''' (1)(2) Defeat all enemies '''Defeat Condition:''' (1) Any ally is defeated: (2) Ally battleship is defeated, Fire Bomber, Diamond Force, or Skull Squadron are defeated '''Skill Point:''' In 6 turns, destroy Glavil and Gavil. You must destroy Glavil before Gavil '''Secret Requirements:'''
*Gavil and FBz-99G Zaubergeran
**Gamlin must defeat Gavil
'''Unit Acquisition:'''
*YF-19 (Isamu) (Before Deploying)
*YF-21 (Guld) (Before Deploying)
*VF-1S S Valkyrie (Focker)
*VF-1S S Valkyrie (Hikaru)
*VF-1A S Valkyrie (Kakizaki)
*VF-17D Nightmare (Gamlin)
*VF-17D Nightmare (Physica)
*VF-19 Kai Fire Valkyrie (Basara)
*VF-11 MAXL Kai (Mylene)
*VF-17 Kai Nightmare (Ray, Veffidas)

|-
| class="fc-route2" |'''第３１話：青き清浄なる世界のために Scenario 31 - For Our Blue & Pure World'''
| class="fc-route4" |'''第３１話：禁断の惑星へ Scenario 31 - To the Forbidden Planet'''

|-
|'''Victory Condition:''' (1) Defeat all enemies; (2)(3) Defeat all Mobile Dolls, All ZAFT Units retreat '''Defeat Condition:''' (1)(2) Ally battleship is defeated, Heero is defeated; (3) Ally battleship is defeated '''Skill Point:''' Do not let a single ZAFT machine get shot down '''Secret Requirements:'''
*Duel Gundam
**Yzak must survive the scenario.
'''Unit Acquisition:'''
*Archangel gains Newman as a subpilot
*Freedom Gundam (Kira)
*Daitarn 3 (Banjo)
*Black Wing (Alan)

|'''Victory Condition:'''
*1st Part: Defeat all enemies
*2nd Part: Defeat Gepelnitch
'''Defeat Condition:'''
*1st Part: Any ally is defeated
*2nd Part: Ally battleship is defeated, Basara or Gamlin are defeated
'''Skill Point:''' In 7 turns, destroy Glavil and Gavil and make Gepelnitch's ship retreat (at 50,000 HP) '''Secret Requirements:'''
*Destroid Monster
**Get the Skill Point on this stage.
*Gavil and FBz-99G Zaubergeran
**Gamlin must defeat Gavil 
'''Unit Acquisition:'''
*Destroid Monster

|-
| class="fc-route2" |'''第３２話：守護神の巫女 Scenario 32 - Priestess of the Guardian God'''
| class="fc-route4" |'''第３２話：インフィニティ・ソウル Scenario 32 - Infinity Soul'''

|-
|'''Victory Condition:''' (1)(2) Defeat all enemies '''Defeat Condition:''' Any Ally is defeated; Ally battleship is defeated, Sanger or Rastel are defeated '''Skill Point:''' In 5 turns, destroy the General of Hell or Flora. '''Secret Requirements:''' '''Unit Acquisition:'''
*Dygenguar (Sanger)
*Assenseiter (Ratsel)

|'''Victory Condition:''' (1) Valgo is defeated; (2)(3) Defeat all enemies '''Defeat Condition:''' (1) Mylene, Ray, or Gamlin are defeated; (2) Basara, Mylene, Ray, or Gamlin are defeated; (3) Ideon is defeated '''Skill Point:''' In 6 turns, destroy Valgo '''Secret Requirements:'''
*Gavil and FBz-99G Zaubergeran
**Gamlin must defeat Gavil 
'''Unit Acquisition:'''
*VF-17D Nightmare → VF-17S Nightmare (Gamlin)
*VF-17D Nightmare (Docker)
**VF-17S (Gamlin), VF-17D (Physica) and VF-17D (Docker) gain the "Diamond Force Attack" combination attack
*VF-19 Kai Fire Valkyrie, VF-11 MAXL Kai, and VF-17 Kai Nightmare gain the "Sound Booster" mech ability
**All VF-19 Kai Fire Valkyrie SB Songs gain (MAP) and (ALL) combination attack variants when Sound Booster activates.
**All VF-11 MAXL Kai SB Songs gain (MAP) and (ALL) combination attack variants when Sound Booster activates.
*Ideon (Cosmo, Kasha, Moera)
** Ideon gains the "Ideon Sword" and "Ideon Sword (MAP)" attacks when IDE gauge is full, and HP is below 30%
*Soloship (Bess, Hatari)

|-
| class="fc-route2" |'''第３３話：暁への脱出 Scenario 33 - Escape to Daybreak'''
| class="fc-route4" |'''第３３話：受け継ぎし遺産 Scenario 33 - The Successor's Inheritance'''

|-
|'''Victory Condition:''' (1)(2) Defeat all enemies besides the Albion '''Defeat Condition:''' (1) Ally battleship is defeated, Kira, Shinobu, or Alan are defeated, Albion is defeated; (2) Kira, Shinobu, Alan, Mwu, or Cagalli are defeated '''Skill Point:''' In 8 turns, destroy all enemies except the Albion '''Secret Requirements:''' '''Unit Acquisition:'''
*Strike Gundam (Mwu)
*Strike Rouge (Cagailli)
*M1 Astray (Juri)
*M1 Astray (Mayura)
*M1 Astray (Asagi)
*Justice Gundam (Athrun)
*Buster Gundam (Dearka)
*Mazinger Z gains the "Giant Swing Rocket Punch" attack
*Great Mazinger gains the "Great Booster" attack
*Koutetsu Jeeg stats are enhanced and can transform into Jeeg Panzeroid
*Dancouga and Black Wing can combine into Final Dancouga.

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated, Akira or Jinguji are defeated '''Skill Point:''' In 8 turns, destroy Etzira, Valgo, Glavil, Gabro Zan, and Gije '''Secret Requirements:''' '''Unit Acquisition:'''
*VF-1A S Valkyrie (Kakizaki)
*Raideen gains the Mutron Open mech ability
*Ideon (Cosmo, Kasha, Moera)
*Soloship (Bess, Hatari)
*Battle 7 (Max, Exedore, Miho, Sally)
*VF-1S S Valkyrie (Fokker)
*VF-1S S Valkyrie (Hikaru)
*VF-1A S Valkyrie (Kakizaki)
*YF-19 (Isamu)
*YF-21 (Guld)
*VF-19 Kai Fire Valkyrie (Basara)
*VF-11 MAXL Kai (Mylene)
*VF-17 Kai Nightmare (Ray, Veffidas)
*VF-17S Nightmare (Gamlin)
*VF-17D Nightmare (Physica)
*VF-17D Nightmare (Docker)

|}
 

==Stages 34 - 44==
{| width="100%"
|- class="fc-route-h"
| width="25%" |'''Touma Route'''
| width="25%" |'''Kusuha Route'''
| width="25%" |'''Cobray Route'''
| width="25%" |'''Selena Route'''

|-
| class="fc-route1" |'''第３４話：武人の心、その意味 Scenario 34 - Why a Warrior Fights'''
| class="fc-route2" |'''第３４話：怒りの強念者 Scenario 34 - The Wrath of a Esper'''
| class="fc-route3" |'''第３４話：虚ろな魂の捕囚 Scenario 34 - Captivity of the Hollow Soul'''
| class="fc-route4" |'''第３４話：ベトレイヤー Scenario 34 - Betrayer'''

|-
|'''Victory Condition:'''
*1st Part: (1)(2) Defeat all enemies
*2nd Part: Bemidoban is defeated 
'''Defeat Condition:'''
*1st Part: (1) Ally battleship is defeated; (2) Ally battleship is defeated, Touma is defeated
*2nd Part: Touma is defeated
'''Skill Point:''' Defeat all enemies within 6 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Raioh (Touma)
*Mazinger Z, Great Mazinger and Getter Dragon gain the "F Dynamic Special" combination attack

|'''Victory Condition:'''(1)(2) Shin RyuOhKi is defeated; (3)(4) Bemidoban and Shmuel are defeated '''Defeat Condition:''' (1) Any ally is defeated; (2) Kusuha is defeated; (3) Kusuha is defeated, Ally battleship is defeated; (4) Ally battleship is defeated '''Skill Point:''' Destroy the Bemidoban (retreats (8000 (E) / 10000 (N) / 12000 (H)) HP) '''Secret Requirements:''' '''Unit Acquisition:'''
*Mazinger Z, Great Mazinger and Getter Dragon gain the "F Dynamic Special" combination attack
*Dygenguar (Sanger)
*Aussenseiter (Ratsel)

|'''Victory Condition:''' Shin RyuOhKi is defeated '''Defeat Condition:''' Ally battleship is defeated, Cobray, Arad, or Seolla are defeated '''Skill Point:''' Defeat Shin RyuOuKi within 6 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Werkbau (Cobray)
*Mazinger Z, Great Mazinger and Getter Dragon gain the "F Dynamic Special" combination attack

|'''Victory Condition:''' (1) Shmuel is defeated; (2)(3) Bemidoban defeated Shin RyuOhKi '''Defeat Condition:''' (1) Selena is defeated; (2) Ally battleship is defeated, Selena is defeated; (3) Ally battleship is defeated '''Skill Point:''' Bemidoban and Shin RyuOuKi shot down. Both flee when below (8000 (E) / 10000 (N) / 12000 (H)) HP. '''Secret Requirements:''' '''Unit Acquisition:'''
*Mazinger Z, Great Mazinger and Getter Dragon gain the "F Dynamic Special" combination attack
*Alterion (CF) (Ibis, Tsugumi)
*AS Soleares (Selena, Elma) is unavailable during the intermission

|-
| class="fc-route1" |'''第３５話：闘志、誰がために Scenario 35 - For Whom the Fighting Spirit Burns'''
| class="fc-route2" |'''第３５話：魂、久遠に Scenario 35 - The Soul, Into Eternity'''
| class="fc-route3" |'''第３５話：THE GUN OF DIS Scenario 35 - THE GUN OF DIS'''
| class="fc-route4" |'''第３５話：クロージング・ハート Scenario 35 - Closing Heart'''

|-
|'''Victory Condition:''' (1)(2) Defeat all enemies '''Defeat Condition:''' (1) Touma is defeated; (2) Ally battleship is defeated, Touma, Sanger, or Rastel are defeated '''Skill Point:''' Defeat all enemies within 4 turns of allied reinforcements arriving. '''Secret Requirements:''' '''Unit Acquisition:'''
*DaiRaioh(Touma)
*Dygenguar (Sanger)
*Aussenseiter (Ratsel)

|'''Victory Condition:''' (1)(2)(3) Shin RyuOhKi is defeated '''Defeat Condition:''' (1) Kusuha or Bullet are defeated; (2) Kusuha is defeated; (3) Ally battleship is defeated, Kusuha is defeated '''Skill Point:''' Destroy Shin RyuOhKi within 6 turns of Varuch Ben and Ishar's arrival, destroying them first. '''Secret Requirements:''' '''Unit Acquisition:'''
*GouRyu Kai (Kusuha)
*Raiko Kai (Bullet)
*Shin RyuKoOh (Kusuha, Bullet)
*Dygenguar (Sanger)
*Aussenseiter (Ratsel)

|'''Victory Condition:''' (1)(2) Bemidoban or Shmuel are defeated; (3) ??? is defeated; (4) Valk Baal is defeated '''Defeat Condition:''' (1) Cobray is defeated, (2)(3)(4) Ally battleship is defeated, Cobray is defeated '''Skill Point:''' Defeat the Bemidoban within 5 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Varuch Ben (Cobray)
*Dis Astranagant (Cobray)

|'''Victory Condition:''' (1)(2) Defeat all enemies '''Defeat Condition:''' (1) Selena is defeated; (2) Ally battleship is defeated '''Skill Point:''' Map cleared within 7 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Eslim (Selena)
*Alterion (CF) replaces Tsugumi with Slay as a Subpilot

|-
| colspan="4" class="fc-std-sc" |'''第３６話：激突！勇者VS勇者！ Scenario 36 - Clash! Brave vs. Brave!'''

|-
| colspan="4" |'''Victory Condition:'''
*1st Part: Defeat all enemies
*2nd Part: Ally battleship is defeated
'''Defeat Condition:'''
*1st Part: Star GaoGaiGar is defeated
*2nd Part: Gai is defeated
'''Skill Point:''' Defeat all enemies within 6 turns. '''Secret Requirements:'''
*EVA-01 F-Type Equipment
**Shinji must defeat Ramiel on the first part of this scenario.
*Early Nu Gundam HWS
**Amuro must have 60 or more kills by the end of the scenario.
*GP-02A
**Burning, Monsha, Bate, and Adel must have a combined killcount of 100 or more by the end of the scenario.
*Nuclear Bazooka
**Meet the requirements for GP-02A
*Black Getter
**Michiru must have 20 kills or more by the end of the scenario.
'''Unit Acquisition:'''
*Gundam GP02
*Megarider
*Re-GZ BWS
*MP Nu Gundam
*Black Getter
*VF-1S S Valkyrie (Fokker)
*VF-1S S Valkyrie (Hikaru)
*VF-1A S Valkyrie (Kakizaki)
*VF-1J S Valkyrie
*YF-19 (Isamu)
*YF-21 (Guld)
*Battle 7 (Max)
*VF-19 Kai Fire Valkyrie (Basara)
*VF-11 MAXL Kai (Mylene)
*VF-17 Kai Nightmare (Ray)
*VF-17S Nightmare (Gamlin)
*VF-17D Nightmare (Physica)
*VF-17D Nightmare (Docker
*Soloship (Bess, Hatari)
*Ideon (Cosmo, Kasha, Moera)

|-
| colspan="4" class="fc-std-sc" |'''第３７話：果て無き旅路の始まり Scenario 37 - The Beginning of an Unending Journey'''

|-
| colspan="4" |'''Victory Condition:''' (1) Defeat all enemies; (2)(3) Devariim is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated; (3) Ally battleship is defeated, Bundle, Cutnall, or Kernagul are defeated
'''Skill Point:''' All enemies destroyed within 6 turns, with Devariim being last. '''Secret Requirements:''' '''Unit Acquisition:'''
*Heavy Weapons System parts for Nu Gundam
*Evangelion Unit 0 Custom gains the "N2 Mine" MAP attack
*Evangelion Unit 1 gains the "Magoroku E Sword" attack
*Gunbuster (Noriko)
*Sizzler Black (Jung)
*Eltrium (Tashiro, Deputy Chief)
*Bundle Ship (Bundle)
*Cutnall Ship (Cutnall)
*Kernagul Ship (Kernagul)

|- class="fc-route-h"
| colspan="2" |'''Go with the Soloship''' Gundam (0083, Zeta, ZZ, CCA, Wing, SEED) Getter Robo Raideen Daitarn 3 Evangelion Ideon GaoGaiGar
| colspan="2" |'''Go with the Battle 7''' Mazinger (Z, Great) Macross (DYRL, 7, Plus) Steel Jeeg Combattler V Voltes V Gunbuster Daimos Gaiking Goshogun Dancouga Virtual On

|-
| colspan="2" class="fc-route1" |'''第３８話：運命の炎の中で Scenario 38 - Within the Fires of Destiny'''
| colspan="2" class="fc-route3" |'''第３８話：戦火は星の瞬きと Scenario 38 - The Fires of War Among the Twinkling Stars'''

|-
| colspan="2" |'''Victory Condition:'''
*1st Part: Enemy Battleship is defeated
*2nd Part: (1) Defeat all enemies; (2) Dalam's Ship is defeated
'''Defeat Condition:'''
*1st Part: Ally battleship is defeated, Ideon is defeated
*2nd Part: (1) Ally battleship is defeated; (2) Ally battleship is defeated, Cosmo is defeated
'''Skill Point:''' Clear the map within 7 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Ideon loses Moera as a subpilot
*Ideon gains the "Ideon Gun" attack

| colspan="2" |'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Defeat all enemies within 6 turns. '''Secret Requirements:''' '''Unit Acquisition:'''

|-
| colspan="2" class="fc-route1" |'''第３９話：果てに待つもの Scenario 39 - What Awaits at the End'''
| colspan="2" class="fc-route3" |'''第３９話：ただ母星のために Scenario 39 - All for the Motherworld'''

|-
| colspan="2" |'''Victory Condition:''' (1)(2)Gabro Zan is defeated '''Defeat Condition:''' (1) Ally battleship is defeated, Ryouma, Hayato, Benkei, or Michiru are defeated; (2) Ally battleship is defeated, Ryouma, Hayato, Benkei, or Cosmo are defeated '''Skill Point:''' Destroy all Buff Clan ships within 8 turns, saving Gabro Zan for last. '''Secret Requirements:''' '''Unit Acquisition:'''
* Ideon gains Gije as a subpilot
* Shin Getter-1 gains the "Shin Shine Spark" attack

| colspan="2" |'''Victory Condition:''' Heinel is defeated '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Within 7 turns, defeat all enemies, then defeat Heinel and Richter (Richter must be defeated before Heinel) '''Secret Requirements:''' '''Unit Acquisition:'''

*Goshogun gains the "GoFlasher Special" attack

|-
| colspan="2" class="fc-route1" |'''第４０話：勇者王、最後の刻！ Scenario 40 - The King of Brave’s Final Hour!'''
| colspan="2" class="fc-route3" |'''第４０話：勇気、果つる時… Scenario 40 - When Courage Fails...'''

|-
| colspan="2" |'''Victory Condition:'''
*1st Part: Defeat all enemies
*2nd Part: Ally battleship is defeated
'''Defeat Condition:'''
*1st Part: Defeat all enemies
*2nd Part: Gai is defeated
'''Skill Point:''' Defeat all enemies within 6 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*All GaoGaiGar units are lost

| colspan="2" |'''Victory Condition:''' (1)(2)(3) Defeat all enemies '''Defeat Condition:''' (1) Gai is defeated; (2) Ally battleship is defeated, Gai is defeated; (3) Ally battleship is defeated '''Skill Point:''' Defeat all enemies within 7 turns, with Palparepa Plus being the last one. '''Secret Requirements:''' '''Unit Acquisition:'''
*GaoFighGar (Gai)
*All GaoGaiGar units are lost

|-
| colspan="4" class="fc-std-sc" |'''第４１話：銀河が消滅する日 Scenario 41 - The Day the Galaxy is Extinguished'''

|-
| colspan="4" |'''Victory Condition:''' (1) Defeat all enemies; (2) GaoFighGar is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated, J is defeated '''Skill Point:''' GaoFighGar shot down by turn 7. '''Secret Requirements:'''
*Gije & Ganga Rube
**When given the option, choose to meet the opponent's challenge (first option).
'''Unit Acquisition:'''
*J-Ark (J, Tomoro)
|-
| colspan="4" class="fc-std-sc" |'''第４２話：超勇者黙示録 Scenario 42 - The Super Brave Apocalypse'''

|-
| colspan="4" |'''Victory Condition:'''
*1st Part: Defeat all enemies
*2nd Part: Genesis GaoGaiGar reaches the designated point in 4 turns
'''Defeat Condition:'''
*1st Part: Gai or J are defeated
*2nd Part: Ally battleship is defeated, Gai is defeated, 5th turn is reached
'''Skill Point:''' All enemies shot down by turn 7. '''Secret Requirements:'''
* J-Phoenix & Renais (Sub Pilot)
**Have J defeat Pia Decem on the first part of the stage. Defeat Pia Decem again to gain the attack.
'''Unit Acquisition:'''
* King J-der gains the "J-Phoenix" attack, and gains Renais as a sub-pilot
**Koryuu and Anryuu lose the "Renais Support Attack" attacks
*Genesic GaoGaiGar (Gai)
*J-Ark (J, Tomoro)
** Renais also is a sub-pilot if the conditions are met in the first part of the stage
*Goldymarg (Goldymarg)
*Big Volfogg (Volfogg)
*TenRyuJin (TenRyuJin)
*KoRyu (KoRyu)
*AnRyu (AnRyu)
*EnRyu (EnRyu)
*HyoRyu (HyoRyu)
*Mic Sounder XIII (Mic Sounder XIII)

|- class="fc-route-h"
|'''Touma Route'''
|'''Kusuha Route'''
|'''Cobray Route'''
|'''Selena Route'''

|-
| class="fc-route1" |'''第４３話：閉ざされた世界で Scenario 43 - In a Closed-Off World'''
| class="fc-route2" |'''第４３話：真の龍神 Scenario 43 - The True Dragon God'''
| class="fc-route3" |'''第４３話：人形たちの宴 Scenario 43 - The Doll’s Banquet'''
| class="fc-route4" |'''第４３話：サイレント・クライ Scenario 43 - Silent Cry'''

|-
|'''Victory Condition:'''
*1st Part: (1) Defeat all enemies; (2) Vaikran is defeated, Houle is defeated
*2nd Part: Baran is defeated
'''Defeat Condition:'''
*1st Part: (1) Ally battleship is defeated, Touma or Ryusei are defeated; (2) Ally battleship is defeated, Ryusei is defeated
*2nd Part: Touma is defeated
'''Skill Point:''' Defeat the Bemidoban within 5 turns. '''Secret Requirements:''' '''Unit Acquisition:'''

|'''Victory Condition:''' (1) Defeat Shin RyuOhKi; (2) Vaikran is defeated, Houle is defeated '''Defeat Condition:''' (1) Kusuha or Ryusei are defeated; (2) Ally battleship is defeated, Ryusei is defeated '''Skill Point:''' Defeat Shin RyuOhKi within 5 turns. '''Secret Requirements:''' '''Unit Acquisition:'''

|'''Victory Condition:'''
*1st Part: (1) Defeat all enemies; (2) Vaikran is defeated, Houle is defeated
*2nd Part: Valk Baal is defeated
'''Defeat Condition:'''
*1st Part: (1)(2) Ally battleship is defeated, Ryusei is defeated
*2nd Part: Cobray is defeated
'''Skill Point:''' Defeat the Bemidoban within 5 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Dis Astranagant (Cobray) is unavailable during the intermission

|'''Victory Condition:''' (1) Defeat all enemies; (2)(3) Vaikran is defeated, Houle is defeated'''Defeat Condition:''' (1)(2) Ally battleship is defeated, Selena, Ibis, or Ryusei are defeated (3) Ryusei is defeated'''Skill Point:''' Defeat the Bemidoban within 5 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*AS Alegrias (Selena, Elma?) Is unavailable until the next stage

|-
| class="fc-route1" |'''第４４話：闘志、未来のために Scenario 44 - Fighting Spirit, for the Future'''
| class="fc-route2" |'''第４４話：四神招魂、ここに Scenario 44 - The Four Gods Souls, Gather Here'''
| class="fc-route3" |'''第４４話：鋼の戦神 Scenario 44 - The Steel War God'''
| class="fc-route4" |'''第４４話：マイホーム・マイフレンズ Scenario 44 - My Home, My Friends'''

|-
|'''Victory Condition:'''
*1st Part: Vaikran is defeated
*2nd Part: (1)(2) Vaikran is defeated
'''Defeat Condition:'''
*1st Part: Ally battleship is defeated, Ryusei is defeated
*2nd Part: (1) Touma or Lyria are defeated; (2) Touma, Baran, or Lyria are defeated
'''Skill Point:''' Destroy the Vaikran within 5 turns. '''Secret Requirements:'''
*VF-19F Excaliburs
**Max must have a total of 60 or more kills by the end of the scenario, if you do not pick the Go to Varauta route.
*Gije & Ganga Rube
**You must pick the Go To Bozoan Route.
'''Unit Acquisition:'''
* DaiRaioh gains the "Jinrai" attack 
*Banpreios (Ryuusei, Rai, Mai)
*Dygenguar (Sanger)
*Aussenseiter (Ratsel)
*Shumel (Lyria)
*Bemidoban (Baran)

|'''Victory Condition:'''
*1st Part: Vaikran is defeated
*2nd Part: (1)(2) Vaikran is defeated
'''Defeat Condition:'''
*1st Part: Kusuha or Ryusei are defeated
*2nd Part: (1) Ally battleship is defeated, Kusuha is defeated; (2) Kusuha, Bullet, or Lyria are defeated
'''Skill Point:''' Destroy the Vaikran within 5 turns. '''Secret Requirements:'''
*VF-19F Excaliburs
**Max must have a total of 60 or more kills by the end of the scenario, if you do not pick the Go to Varauta route.
*Gije & Ganga Rube
**You must pick the Go To Bozoan Route.
'''Unit Acquisition:'''
*Banpreios (Ryuusei, Rai, Mai)
*Dygenguar (Sanger)
*Aussenseiter (Ratsel)
*Shumel (Lyria)
*Shin RyuKoOh can now transform into Shin KoRyuOh

|'''Victory Condition:'''
*1st Part: (1) Defeat all enemies; (2) Vaikran is defeated
*2nd Part: Defeat all enemies
'''Defeat Condition:'''
*1st Part: (1)(2) Ally battleship is defeated, Ryusei, Arad or Seola are defeated
*2nd Part: Ally battleship is defeated, Cobray or Lyria are defeated
'''Skill Point:''' Destroy the Vaikran within 3 turns of its arrival. '''Secret Requirements:'''
*VF-19F Excaliburs
**Max must have a total of 60 or more kills by the end of the scenario, if you do not pick the Go to Varauta route.
*Gije & Ganga Rube
**You must pick the Go To Bozoan Route.
'''Unit Acquisition:'''
*Dis Astranagant (Cobray)
*Banpreios (Ryuusei, Rai, Mai)
*Dygenguar (Sanger)
*Aussenseiter (Ratsel)
*Shumel (Lyria)

|'''Victory Condition:'''
*1st Part: (1) Valk Isher is defeated; (2) Vaikran is defeated
*2nd Part: (1)(2) Vaikran is defeated
'''Defeat Condition:'''
*1st Part: (1)(2) Ally battleship is defeated, Ryusei or Ibis are defeated
*2nd Part: (1) Ally battleship is defeated, Selena, Ibis, or Lyria are defeated; (2) Selena or Lyria are defeated
'''Skill Point:''' Destroy the Vaikran within 3 turns of its arrival. '''Secret Requirements:'''
*VF-19F Excaliburs
**Max must have a total of 60 or more kills by the end of the scenario, if you do not pick the Go to Varauta route.
*Gije & Ganga Rube
**You must pick the Go To Bozoan Route.
'''Unit Acquisition:'''
*Banpreios (Ryuusei, Rai, Mai)
*Dygenguar (Sanger)
*Aussenseiter (Ratsel)
*Shumel (Lyria)
*Alterion (CF) replaces Slay with Tsugumi as a subpilot
*Vegalion (Slay)
**Alterion (CF) and Vegalion can combine into Hyperion

|}
 

==Stages 45 - 48==
{| width="100%"
|- class="fc-route-h"
| colspan="2" |'''Go to Earth'''
| colspan="2" |'''Go to Space'''

|- class="fc-route-h"
| width="25%" |'''Search for Irui''' Mazinger (Z, Great) Getter Robo Kotetsu Jeeg Gaiking Dancouga
| width="25%" |'''Fight against ZAFT''' Gundam (0083, Z, ZZ, CCA) Gundam Wing Gundam SEED Evangelion
| width="25%" |'''Go to Varauta''' Macross (DYRL, 7, Plus) GoShogun Daitarn 3 Gunbuster
| width="25%" |'''Go to Boazan''' Ideon Combattler V Voltes V Daimos Raideen GaoGaiGar Virtual On

|-
| class="fc-route1" |'''第４５話：とらわれの心、叫ぶ時 Scenario 45 - When the Captive Heart Cries Out'''
| class="fc-route2" |'''第４５話：忍び寄る終焉 Scenario 45 - Creeping Death'''
| class="fc-route3" |'''第４５話：悪夢の突入作戦 Scenario 45 - Charging into a Nightmare'''
| class="fc-route4" |'''第４５話：もう一つの母星ボアザン Scenario 45 - Another Mother Planet - Boazan'''

|-
|'''Victory Condition:''' (1) Defeat all enemies: (2) Legion is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated '''Skill Point:''' Defeat all enemies within 7 turns '''Secret Requirements:'''
'''Unit Acquisition:'''

|'''Victory Condition:''' (1) Defeat all enemies; (2) All Angels are defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated, Shinji, Asuka, or Rei are defeated '''Skill Point:''' Defeat all enemies within 5 turns. '''Secret Requirements:'''
*Early Nu Gundam HWS
**If you did not receive it on Scenario 37, Amuro must have 60 or more kills by the end of the scenario.
*EVA-01 F-Type Equipment(optional)
**Shinji must defeat Armisael.
*Neue Ziel
**Kou must have 40 or more kills than Keith by the end of the scenario.
*Val Varo
**Keith must have 20 or more kills than Kou by the end of the scenario.
*Gerbera Tetra
**Kou and Keith's killcounts must be within 6 of one another by the end of the scenario.
*Quin Mantha
**The sum of Ple and Ple 2's killcounts must be a number ending in 5 at the end of the scenario.
*Haman's Qubeley
**The sum of Ple and Ple 2's killcounts must be a number ending in 0 at the end of the scenario.
*MP Qubeleys
**The sum of Ple and Ple 2's killcounts must be a number ending in 7 at the end of the scenario.
*Doven Wolf
**The sum of Beecha and Mondo's killcounts must be a number ending in 0 at the end of the scenario.
*Geymalk
**The sum of Beecha and Mondo's killcounts must be a number ending in 5 at the end of the scenario.
*Strike Rouge IWSP
**The sum of Cagalli, Julie, Mayura, and Asagi's killcounts must be 100 or more by the end of the scenario.
*Early Full Armor ZZ Gundam
**Judau, Mondo, Beecha, Elle, Roux, and Iino's combined killcounts must be greater than 115 by the end of this scenario.
'''Unit Acquisition:'''
*Neue Ziel OR Val Varo OR Gerbera Tetra
*Quin Mantha OR Haman's Qubeley OR Mass Production Qubeley (x2)
*Doven Wolf OR Geymalk
*Strike Rougue IWSP
*Heavy Weapon System for Nu Gundam
*Full Armor Parts for ZZ Gundam
*Evangelion Unit 2 gains the "A.T. Field" attack
*Evangelion Unit 0 Custom gains the "Lance of Longinus" attack

|'''Victory Condition:'''
*1st Part: All allies reach the designated point, aside Battle 7
*2nd Part: Any ally reaches the designated point
'''Defeat Condition:'''
*1st Part: Any ally is defeated
*2nd Part: Any ally is defeated
'''Skill Point:''' Defeat all enemies before moving a unit to the target area. '''Secret Requirements:'''
'''Unit Acquisition:'''
*The following all gain the "Large Anti-Ship Reaction Missile" attack
**VF-1S S Valkyrie (Focker), VF-1S S Valkyrie (Hikaru), VF-1A S Valkyrie (Kakizaki)
**VF-17S Nightmare (Gamlin), VF-17D Nightmare (Docker), VF-17D Nightmare (Physica)
**YF-19 (Isamu), YF-21 (Guld)

|'''Victory Condition:''' Zartan is defeated '''Defeat Condition:''' Any ally is defeated '''Skill Point:''' Destroy all other enemies before destroying Zaltan. '''Secret Requirements:'''
'''Unit Acquisition:'''
*Voltes V is unavailable during the intermission
*Daimos is unavailable during the intermission

|-
| class="fc-route1" |'''第４６話：さらば父よ、戦士達の旅立ち Scenario 46 - Farewell, Father! The Warriors Depart'''
| class="fc-route2" |'''第４６話：永遠を信じて Scenario 46 - Believe in Eternity'''
| class="fc-route3" |'''第４６話：野望の第４惑星 Scenario 46 - The Fourth Planet of Ambition'''
| class="fc-route4" |'''第４６話：崩れゆく邪悪の塔 Scenario 46 - The Collapsing Tower of Evil'''

|-
|'''Victory Condition:''' (1) Steel Jeeg persuades Flora; (2) Defeat Yamata no Orochi, Demonica, and the Dragon Ship; (3) '''Defeat Condition:''' (1) Flora is defeated, Ally battleship is defeated, Kouji, Tetsuya, or Steel Jeeg are defeated; (2) Yamata no Orochi reaches the designated point, Ally battleship is defeated, Kouji, Tetsuya or Steel Jeeg are defeated '''Skill Point:''' Destroy Ryuuma and the Grand Marshall of Hell within 8 turns. '''Secret Requirements:'''
*Minmei's Disc
**Move Boss's squad onto either 'Hut' tile on the beach, and you will pick up the item
'''Unit Acquisition:'''
*Mazinkaizer gains the "Kaizer Nova" attack and Flight (S Rank in Air)

|'''Victory Condition:''' (1)(2) Defeat all enemies; (3) The Dominion withdraws '''Defeat Condition:''' (1) Any ally is defeated; (2)(3) Ally battleship is defeated, Kira or Athrun are defeated '''Skill Point:''' Destroy the Dominion (retreats at (10000HP (E) / 15000HP (N)/20000HP (H)) '''Secret Requirements:''' '''Unit Acquisition:'''
*Eternal (Lacus, Andrew)
*BuCUE
*METEOR parts for Freedom Gundam
*METEOR parts for Justice Gundam
*LaGOWE

|'''Victory Condition:''' (1) Guide all enemies east past the designated line; (2) All allies reach the escape point '''Defeat Condition:''' (1) Any ally is defeated, Any enemy is defeated; (2) Any ally is defeated '''Skill Point:''' Clear the map by defeating all enemies within 8 turns of the victory condition change '''Secret Requirements:'''
*VF-19F Excaliburs
**Max must get 15 or more kills on this scenario.
'''Unit Acquisition:'''
*VF-22S Sturmvogel II (Max)
*FBz-99G Zaubergeran (Gamlin)
*VF-19 Kai Fire Valkyrie gains the song "TRY AGAIN"
**VF-19 Kai Fire Valkyrie, VF-11 MAXL Kai, and VF-17 Kai Nightmare gain the "TRY AGAIN" (MAP) and (ALL) combination attack

|'''Victory Condition:''' (1) None; (2) Warchimedes is defeated; (3) Janera is defeated '''Defeat Condition:''' (1) Any friendly unit is defeated, Voltes V or Daimos are defeated; (2)(3) Ally battleship is defeated, Hyouma, Ken'ichi, Kazuya, or Heinel are defeated '''Skill Point:''' Destroy all enemies and finish the stage within 10 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Combattler V, Voltes V, and Daimos gain the "Choudenji SeiKenZuki" combination attack

|-
| class="fc-route1" |'''第４７話：神になろうとした男 Scenario 47 - The Man Who Tried to Become a God'''
| class="fc-route2" |'''第４７話：ヒトの見た夢 Scenario 47 - The Dream People Saw'''
| class="fc-route3" |'''第４７話：大宇宙の意志 Scenario 47 - The Will of the Universe'''
| class="fc-route4" |'''第４７話：因果の海で Scenario 47 - In the Sea of Causality'''

|-
|'''Victory Condition:''' (1) Defeat all enemies; (2) Shapiro is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated '''Skill Point:''' Destroy Shapiro within 6 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Gaiking and Daiku Maryuu gain the "Giant Cutter Upside-down Slash" combination attack

|'''Victory Condition:''' (1)(2)(3) Defeat all enemies; '''Defeat Condition:''' (1) Ally battleship is defeated, Kira, Mwu, or Dearka are defeated; (2) Kira is defeated; (3) The Vesalius is defeated '''Skill Point:''' Orga, Clotho and Shani shot down before Fllay reaches the Dominion. '''Secret Requirements:''' '''Unit Acquisition:'''

|'''Victory Condition:''' (1)(2)(3) Defeat all enemies '''Defeat Condition:''' (1) Any ally is defeated; (2) Ally battleship is defeated, Bundle is defeated; (3) Ally battleship is defeated, Bundle, Gamlin, or Mylene are defeated '''Skill Point:''' Destroy all SMTC units within 5 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*VF-19S Excalibur (before deployment)
*VF-19F Excalibur (x2) (before deployment)
*Bundle's Ship (Bundle, Cutnal, Kernagul)

|'''Victory Condition:'''
*1st and 2nd Part: Defeat all enemies within (5 (E) / 4 (N) / 3 (H)) turns
*3rd and 4th Part: Defeat all enemies within (4 (E) / 3 (N) / 2 (H)) turns
*5th Part: Defeat all enemies within (8 (E) / 7 (N) / 6 (H)) turns
'''Defeat Condition:'''
*1st and 2nd Part: Ally battleship is defeated, Turn (6 (E) / 5 (N) / 4 (H)) is reached
*3rd and 4th Part: Ally battleship is defeated, Turn (5 (E) / 4 (N) / 3 (H)) is reached
*5th Part: Ally battleship is defeated, Turn (9 (E) / 8 (N) / 7 (H)) is reached
'''Skill Point:''' During the 5th Part: Shoot down the two Gataman Zans before the Gabro Zan '''Secret Requirements:''' '''Unit Acquisition:'''

|-
| colspan="2" class="fc-route1" |'''第４８話：失われた者たちへの鎮魂歌 Scenario 48 - Requiem for the Lost'''
| colspan="2" class="fc-route4" |'''第４８話：銀河に死す Scenario 48 - To Die in the Galaxy'''

|-
| colspan="2" |'''Victory Condition:''' (1) Deathgaia, Gildrome, and Helmut are defeated; (2) Mute Zalbados is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated '''Skill Point:''' Defeat all enemies within 6 turns after Muge Zalbados appears, then defeat Muge Zalbados '''Secret Requirements:'''
*Early Nu Gundam HWS
**If you did not receive it on Scenario 37 or 45, Amuro must have 60 or more kills by the end of the scenario.
'''Unit Acquisition:'''

| colspan="2" |'''Victory Condition:''' (1) Defeat all enemies; (2) Gollum or Zomd are defeated; (3) Defeat all enemies; (4) Gabro Zan is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated, Basara is defeated; (3)(4) Ally battleship is defeated, Ideon is defeated '''Skill Point:''' Destroy GaviGla (retreats at 8000HP (E) / 10000HP (N) / 12000HP (H)) '''Secret Requirements:'''
*Early Nu Gundam HWS
**If you did not receive it on Scenario 37 or 45, Amuro must have 60 or more kills by the end of the scenario.
*Gije & Ganga Rube
**The Ide Gauge must reach level 5 during this scenario.
'''Unit Acquisition:'''
*Ideon replaces Gije with Dek as a Subpilot
*Battle 7 gains the "Large Anti-Ship Reaction Missile" attack
*VF-19 Kai Fire Valkyrie (Basara) is unavailable during the intermission

|}
 

==Stages 49 - 58==
{| width="100%"
|-
| colspan="3" class="fc-std-sc" |'''第４９話：銀河に響く歌声 Scenario 49 - Songs Resounding Through the Galaxy'''

|-
| colspan="3" |'''Victory Condition:'''
*1st Part: Defeat all enemies, In 5 turns Battle 7 reaches the designated point
*2nd Part: (1) In 6 turns, Battle 7 reaches the designated point; (2)(3)(4) Gepelnitch is defeated
'''Defeat Condition:'''
*1st Part: Ally battleship is defeated, Battle 7 doesn't reach the designated point by turn 6
*2nd Part: (1) Ally battleship is defeated, Mylene or Ray are defeated, Battle 7 doesn't reach the designated point by turn 7; (2) Ally battleship is defeated, Ray is defeated; (3) Ally battleship is defeated, Basara, Mylene, or Ray are defeated; (4) Ally battleship is defeated, Basara, Mylene, Ray, or Sybil are defeated
'''Skill Point:''' GaviGla is defeated (in the 1st part) '''Secret Requirements:'''
*Gavil and FBz-99G Zaubergeran
**If Gamlin has over 50 kills, Gamlin must defeat GaviGla during the first half of the scenario. During the second half of the scenario, do not defeat Gavil.
'''Unit Acquisition:'''
*VF-22S Sturmvogel II (Max)
*VF-22S Sturmvogel II (Milia)
*Sybil (Sybil)
**VF-19 Kai Fire Valkyrie, VF-11 MAXL Kai, and VF-17 Kai Nightmare, and Sybil gain the "TRY AGAIN" combination attack
*FBz-99G Zaubergeran (Gavil)

|-
| colspan="3" class="fc-std-sc" |'''第５０話：二つの門と二つの星 Scenario 50 - Two Gates, Two Stars'''

|-
| colspan="3" |'''Victory Condition:''' (1) Hermodr Echad is defeated; (2) Zfield is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated '''Skill Point:''' Destroy the Hermodr Echad within 5 turns. '''Secret Requirements:'''
*Duel Gundam & Yzak
**Dearka's killcount must be 50 or more by the end of the scenario.
'''Unit Acquisition:'''

|-
| colspan="3" class="fc-std-sc" |'''第５１話：終わらない明日へ Scenario 51 - To an Unending Tomorrow'''

|-
| colspan="3" |'''Victory Condition:'''
*1st Part: (1) Destroy all nuclear missiles; (2) Dominion is defeated & Athrun reaches the designated point
*2nd Part: Destroy the Genesis reactor within 4 turns
'''Defeat Condition:'''
*1st Part: (1) Any missile reaches the end of the map, Ally battleship is defeated, Kira, Athrun or Cagalli are defeated; (2) Ally battleship is defeated, Kira, Athrun or Cagalli are defeated
*2nd Part: Kira is defeated, reach the 5th turn
'''Skill Point:''' Destroy the Providence Gundam (in the 2nd part) '''Secret Requirements:'''
*Duel Gundam & Yzak
**During the first half of the scenario, destroy all of the nukes, then have Dearka battle with Yzak
**Both must survive the first half of the scenario
'''Unit Acquisition:'''
*Cagalli and Lacus unlock the SEED pilot skill
*Duel Gundam (Yzak) (can join permanently)

|-
| colspan="3" class="fc-std-sc" |'''第５２話：世界の中心でアイを叫んだもの Scenario 52 - The One Who Cried "Love" at the Heart of the World'''

|-
| colspan="3" |'''Victory Condition:'''
*1st Part: (1)(2)(3) Defeat all enemies (4)(5) EVA Unit 1 is defeated
*2nd Part: EVA Unit 1 is defeated
'''Defeat Condition:'''
*1st Part: (1) Any ally is defeated; (2) Shinji is defeated; (3)(4) Ally battleship is defeated; (5) Ally battleship is defeated, Reach the 6th turn after the "Cross" grows from the Earth
*2nd Part: Shinji is defeated
'''Skill Point:''' Asuka survives for 2 full turns. '''Secret Requirements:'''
*Neue Ziel
**Kou must have 40 or more kills than Keith by the end of the scenario.
*Val Varo
**Keith must have 20 or more kills than Kou by the end of the scenario.
*Gerbera Tetra
**Kou and Keith's killcounts must be within 6 of one another by the end of the scenario.
*Quin Mantha
**The sum of Ple and Ple 2's killcounts must be a number ending in 5 at the end of the scenario.
*Haman's Qubeley
**The sum of Ple and Ple 2's killcounts must be a number ending in 0 at the end of the scenario.
*MP Qubeleys
**The sum of Ple and Ple 2's killcounts must be a number ending in 7 at the end of the scenario.
*Doven Wolf
**The sum of Beecha and Mondo's killcounts must be a number ending in 0 at the end of the scenario.
*Geymalk
**The sum of Beecha and Mondo's killcounts must be a number ending in 5 at the end of the scenario.
*EVA-01 F-Type Equipment
**Shinji must defeat Zeruel on the first part of this scenario.
**Shinji must defeat EVA-01 on the second part of this scenario.
**The sum of Shinji, Asuka, and Rei's killcounts must be 250 or more, or 150 or more if you met the requirement on scenario 45.
*Hi-Nu Gundam
**Amuro and Bright's combined killcounts must be greater than 120 by the end of this scenario.
*Sazabi
**Amuro and Kamille's killcount must be 50 or more each at the end of this scenario. You will receive it at the start of next scenario.
*Strike Rouge IWSP
**If you did not receive it on Scenario 45, the sum of Cagalli, Julie, Mayura, and Asagi's killcounts must be 100 or more by the end of the scenario.
*Destroid Monster
**If you did not receive it on Scenario 31, the sum of Fokker, Hikaru, and Kakizaki's killcounts must be 100 or more by the end of this scenario.
'''Unit Acquisition:'''
*Evangelion Unit 0 (Kaowru)
*Evangelion Unit 0 loses the "Lance of Longinus" attack

|-
| colspan="3" class="fc-prologue" |'''Beyond this point, losing Ideon results in a Game Over'''
|-
| colspan="3" class="fc-std-sc" |'''第５３話：出航！銀河殴り込み艦隊！ Scenario 53 - The Galactic Assault Fleet Takes Sail!'''

|-
| colspan="3" |'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' 230 enemy units shot down by turn 7. '''Secret Requirements:''' '''Unit Acquisition:'''
*All secret units and parts are given after the stage begins <ul><li>Neue Ziel OR Val Varo OR Gerbera Tetra</li><li>Quin Mantha OR Haman's Qubeley OR Mass Production Qubeley (x2)</li><li>Doven Wolf OR Geymalk</li><li>Strike Rougue IWSP</li><li>Hi-Nu Gundam</li><li>Sazabi</li><li>Destroid Monster</li><li>F-Type Equipment for Evangelion Unit 1</li><li>Atomic Bazooka parts for GP-02</li><li>Heavy Weapon System for Nu Gundam</li></ul>
* Full Armor modular parts for Gundam ZZ
** If the secret requirements were not met earlier
*MP Nu Gundam
**Fin Funnel parts for MP Nu Gundam
*Gunbuster adds Kazumi as a Subpilot
**Gunbuster gains the "Super Inazuma Kick" attack
*Ra Cailum gains the "Nuclear Missile" MAP and ALL attacks

|-
| colspan="3" class="fc-std-sc" |'''第５４話：神に守られし星 Scenario 54 - The Planet Guarded by the Gods'''

|-
| colspan="3" |'''Victory Condition:'''
*1st Part: (1) Defeat all enemies; (2) The SRX Team rescues [https://akurasu.net/wiki/Super_Robot_Wars/Alpha_3/Info_Dump#Finding_Aya_on_Scenario_54 Aya]; (3) Jumora is defeated
*2nd Part: Bemidoban is defeated
'''Defeat Condition:'''
*1st Part: (1)(2) Ally battleship is defeated, Ryusei or Viletta are defeated; (3) Ally battleship is defeated, Ryusei, Viletta, Baran, or Lyria are defeated
*2nd Part: Sanger is defeated
**2nd Part (Touma Route): Touma is defeated
'''Skill Point:''' Clear the map within 10 turns, with both Hermoz defeated '''Secret Requirements:''' '''Unit Acquisition:'''
*Banpreios adds Aya as a Subpilot
**Branpreios gains the "Tenjou Tenge Nendou Musou-ken" attack
**Branpreios and R-GUN Powered gain the "Tenjou Tenge Ichigeki Hissatsu-ho" combination attack
*Shumel (Lyria)
*Bemidoban (Baran)

|-
| colspan="3" class="fc-std-sc" |'''第５５話：まつろわぬ神 Scenario 55 - The God Who Resists Order'''

|-
| colspan="3" |'''Victory Condition:'''
*1st Part: (1) Defeat all enemies; (2) Defeat Gebel GanEden
*2nd Part: (1) Defeat all enemies; (2) Defeat Gebel GanEden
'''Defeat Condition:'''
*1st Part: (1)(2) Ally battleship is defeated
*2nd Part: (1)(2) Ally battleship is defeated
'''Skill Point:''' Within 6 turns, defeat both Zfiruds '''Secret Requirements:''' '''Unit Acquisition:'''

|-
| colspan="3" class="fc-std-sc" |'''第５６話：終わりなき総力戦 Scenario 56 - Unending Total War'''

|-
| colspan="3" |'''Victory Condition:'''
*1st Part: Drowa Zan is defeated within 5 turns
*2nd Part: (1) Soloship move next to the Bairal Jinn; (2) Any unit reaches the designated point
'''Defeat Condition:'''
*1st Part: Ally battleship is defeated, 6th turn is reached
*2nd Part: (1)(2) Ally battleship is defeated
'''Skill Point:''' Clear the map within 7 turns. '''Secret Requirements:'''
*Gije & Ganga Rube
**You must pick the Fight The Buff Clan option at the end of the scenario.
*Bad Ending Route
**On New Game+, choose to fight (first option)
'''Unit Acquisition:'''

|- class="fc-route-h"
| width="40%" |'''Fight The Buff Clan''' Ideon, Getter Robo Combattler V, Voltes V, Daimos Daitarn 3 Gundam (0083, Zeta, ZZ, CCA, Wing, SEED)
| width="40%" |'''Fight The STMC''' Mazinger (Z, Great), Steel Jeeg, Raiden Goshogun, Dancouga, Gaiking Macross (DYRL, Plus, 7) Gunbuster, Evangelion, GaoGaiGar Virtual On
| width="20%" |'''Bad Ending '''

|-
| class="fc-route1" |'''第５７話：憎しみの環の中で Scenario 57 - In a Circle of Hatred'''
| class="fc-route3" |'''第５７話：終わりの始まり Scenario 57 - The Beginning of the End'''
| class="fc-prologue" |'''イデ発動ルート最終話：銀河に君と''' '''Ide Activation Final Scenario - With You In The Galaxy'''

|-
|'''Victory Condition:'''
*1st Part: (1) Defeat all enemies; (2) Soloship reaches the designated point
*2nd Part: Defeat all enemies within (11 (E) / 9 (N) / 7 (H)) turns
'''Defeat Condition:'''
*1st Part: (1)(2) All allies are defeated
*2nd Part: Turn (12 (E) / 10 (N) / 8 (H)) is reached, Ally battleship is defeated
'''Skill Point:''' Defeat all enemies within (10 (E) / 8 (N) / 6 (H)) turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Ganga Rube (Gije)

|'''Victory Condition:''' (1)(2) Defeat all enemies '''Defeat Condition:''' (1) Eltrium is defeated; (2) Ally battleship is defeated '''Skill Point:''' Defeat all enemies within 7 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Eltrium (Tashiro, Deputy Chief)

| rowspan="4" |'''Victory Condition:''' Bairal Jinn is defeated '''Defeat Condition:''' Ally battleship is defeated '''Secret Requirements:''' '''Unit Acquisition:'''

|-
| class="fc-route1" |'''第５８話：発動 Scenario 58 - Activation'''
| class="fc-route3" |'''第５８話：死闘、未来を懸けて Scenario 58 - The Mortal Struggle for the Future'''

|-
|'''Victory Condition:'''
*1st Part: Bairal Jinn is defeated
*2nd Part: Bairal Jinn is defeated
'''Defeat Condition:'''
*1st Part: Ally battleship is defeated
*2nd Part: Ally battleship is defeated
'''Skill Point:''' Destroy the Bairal Jinn within six turns. '''Secret Requirements:''' '''Unit Acquisition:'''

|'''Victory Condition:''' (1)(2) Defeat all enemies '''Defeat Condition:''' (1) Ally battleship is defeated; Drowa Zan is defeated, Ally battleship is defeated(2) '''Skill Point:''' All Buff Clan units survive the stage. '''Secret Requirements:''' '''Unit Acquisition:'''

|}
 

==Stages 59 - END==
{| width="100%"
|-
| colspan="2" class="fc-std-sc" |'''第５９話：果てしなき流れの果てに Scenario 59 - At the End of the Unending Flow'''

|-
| colspan="2" |'''Victory Condition:'''
*1st Part: Reach the 11th turn
*2nd Part: Defeat all enemies, 6th turn is reached
'''Defeat Condition:'''
*1st Part: Ally battleship is defeated, Any enemy enters the designated area
*2nd Part: Any enemy enters the designated area, Ally battleship is defeated, Noriko or Jung are defeated
'''Skill Point:''' Defeat all enemies within 5 turns. '''Secret Requirements:''' '''Unit Acquisition:'''

|- class="fc-route-h"
| width="50%" |'''Normal Ending - 56 Skill Points or less, OR turn count 421 or more'''
| width="50%" |'''Good Ending - 57 Skill Points or more AND turn count 420 or less'''

|-
| class="fc-route1" |'''最終話: 終焉の銀河 Final Scenario - A Galaxy of Death'''
| class="fc-route3" |'''最終話: 今遥か遠い彼方… Final Scenario - Now, The Faraway Yonder'''

|-
|'''Victory Condition:''' (1) ??? is destroyed; (2) Kaiser Ephres is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated '''Secret Requirements:''' '''Unit Acquisition:'''

|'''Victory Condition:''' (1) ??? is destroyed; (2)(3) Kaiser Ephres is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated; (3) Irui is defeated '''Secret Requirements:''' '''Unit Acquisition:'''
*Nashim Gan Eden (Irui)

|}

Super Robot Wars/Alpha 3/Flow Chart

2023-06-25T13:25:53Z

KomodoWork: /* Stages 49 - 58 */ Gundam ZZ missing modular armor unlock (it´s not a secret by this stage)

Units and Pilots in Black join your team. 
Units and Pilots in Orange are available for that stage, then leave. 
Units and Pilots in Blue have special requirements. Check the [[../Secrets|Secrets]] page for more details. 
Units and Pilots in Red previously joined, but from this point, are rendered unusable. Those lost permanently are marked so, while others rejoin later on. 
Information in Green are upgrades for units already in your party.

==Stages 01 - 18==
{| width="100%"
|- class="fc-route-h"
| width="25%" |'''Touma Route'''
| width="25%" |'''Kusuha Route'''
| width="25%" |'''Cobray Route'''
| width="25%" |'''Selena Route'''

|-
| class="fc-route1" |'''第１話：闘志、炎に燃ゆる Scenario 1 - Within the Flames, Fighting Spirit Rises'''
| class="fc-route2" |'''第１話：出撃！鋼の龍虎 Scenario 1 - Launch! Dragon and Tiger of Steel'''
| class="fc-route3" |'''第１話：虚空からの転生 Scenario 1 - Reincarnated from the Void'''
| class="fc-route4" |'''第１話：シークレット・ミッション Scenario 1 - Secret Mission'''

|-
|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Any allied unit is defeated '''Skill Point:''' Defeat all enemies in 3 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Raioh (Touma)
*GaoGaiGar (Guy)
*Goldymarg (Goldymarg)
*HyoRyu (HyoRyu)
*EnRyu (EnRyu)

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Any allied unit is defeated '''Skill Point:''' Defeat all enemies in 2 turns '''Secret Requirements:'''
*Bullet
**You must be playing as Kusuha to recruit Bullet.
'''Unit Acquisition:'''
*Gouryu Kai (Kusuha)
*Raikou Kai (Bullet)
*Mazinkaiser (Kouji)
*Diana A (Sayaka)
*Shin Getter (Ryoma, Hayato, Benkei)
*Lady Command (Michiru)

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' (1) Werkbau is defeated; (2) Werkbau is defeated, ally battleship is defeated '''Skill Point:''' Defeat all enemies in 5 turns after enemy reinforcements show up '''Secret Requirements:'''
*Arado and Seolla
**You must be playing as Cobray to recruit Arado and Seolla.
'''Unit Acquisition:'''
*Werkbau (Cobray)
*Nu Gundam (Amuro)
*Ra Cailum (Bright, Torres)
*MP Nu Gundam (Kayra)
*Jegan (Katz)
*Incom & Funnel parts for MP Nu Gundam

|'''Victory Condition:''' (1) All enemies except Salamis Kai shot down; (2) R-Gun Powered shot down '''Defeat Condition:''' (1) Selena shot down, Salamis Kai shot down; (2) Selena shot down '''Skill Point:''' Defeat all enemies except the Salamis Kai in 4 turns '''Secret Requirements:'''
*Ibis and Slay
**You must be playing as Selena to recruit Ibis and Slay.
'''Unit Acquisition:'''
*AS Soleares (Selena, Elma)
*Albion (Synapse, Paserov)
*GP03 Dendrobium (Kou)
*GM Cannon II (Keith)
*GM Custom (Burning)
*GM Custom (Bate)
*GM Custom (Monsha)
*GM Cannon II (Adel)
*Zeta Gundam (Kamille)
*Re-GZ BWS (Four)
*Methuss (Fa)
*Super Gundam (Emma)
*Armed Fortress Orchis parts for Gundam Stamen
*G Defensor parts for Gundam Mk-II

|-
| class="fc-route1" |'''第２話: さらばGGG、さらば勇者 Scenario 2 - Farewell, GGG! Farewell, Braves!'''
| class="fc-route2" |'''第２話: 新たなる侵略者！立ち上がれV Scenario 2 - New Invaders! Rise Up, V!'''
| class="fc-route3" |'''第２話: 血の狼煙 Scenario 2 - Beacon Fire of Blood'''
| class="fc-route4" |'''第２話: フラッシュ・デイ Scenario 2 - Flash Day'''

|-
|'''Victory Condition:''' Defeat all enemies; Defeat ZX-01 '''Defeat Condition:''' Any allied unit is defeated '''Skill Point:''' Defeat the 4 Zonders in 2 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*GaoGaiGar (Guy)
*J-Der (J, Tomoro)
*Great Mazinger (Tetsuya)
*Venus A (Jun)
*Boss Borot (Boss, Nuke, Mucha)
*Kotetsu Jeeg (Jeeg)
*Big Shooter (Miwa)

|'''Victory Condition:''' (1) Defeat all enemies, (2) Defeat Dangel '''Defeat Condition:''' (1) Hyouma defeated (2) Any Allied Unit is defeated '''Skill Point:''' Defeat all enemies in 3 turns, do not lose any Federation Army squads '''Secret Requirements:''' '''Unit Acquisition:'''
*Combattler V (Hyoma, Juzo, Daisaku, Chizuru, Kosuke)
*Jegan (Federation Soldier) x 3

|'''Victory Condition:''' (1) Defeat the Magellan Kai-class Battleship (2) Defeat the Magellan Kai-class Battleship and Nuclear Missiles '''Defeat Condition:''' (1) Any ally unit is defeated (2) Nuclear Missiles reach the marked area on the map '''Skill Point:''' Defeat the enemy missiles and battleship in 7 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Clop-class (Federation Captain)
*Wildfalken (Seolla)
*MP Nu Gundam (Cobray)
*ZZ Gundam (Judau)
*Re-GZ BWS (Roux)
*Albion (Synapse, Paserov)
*GP03 Dendrobium (Kou)
*GM Cannon II (Keith)
*GM Custom (Burning)
*GM Custom (Bate)
*GM Custom (Monsha)
*GM Cannon II (Adel)
*Zeta Gundam (Kamille)
*Re-GZ BWS (Four)
*Methuss (Fa)
*Super Gundam (Emma)
*Armed Fortress Orchis parts for Gundam Stamen
*G Defensor Parts for Gundam Mk-II

|'''Victory Condition:''' Defeat any enemy battleship '''Defeat Condition:''' (1) Allied battleship is defeated; (2) Allied battleship is defeated, Selena is defeated '''Skill Point:''' Defeat the enemy battleship in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*ZZ Gundam (Judau)
*Re-GZ BWS (Roux)
*Nu Gundam (Amuro)
*Ra Cailum (Bright)
*Jegan (Katz)
*MP Nu Gundam (Keyra)
*AS Soleares (Selena, Elma)
*Incom & Funnel parts for MP Nu Gundam

|-
| colspan="4" class="fc-std-sc" |'''第３話: 逆襲！機界31原種 Scenario 3 - Counterattack! The 31 Machine Primevals!'''

|-
| colspan="4" |'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' (1) Ally battleship is defeated, One of the Machine Primevals reaches the edge of the map; (2) Ally battleship is defeated, One of the Machine Primevals reaches the edge of the map, J is defeated '''Skill Point:''' Defeat all enemies in 6 turns '''Secret Requirements:''' '''Unit Acquisition (Touma & Kusuha):'''
*J-Ark (J, Tomoro)
*Nu Gundam (Amuro)
*Ra Cailum (Bright, Torres)
*Jegan (Katz)
*MP Nu Gundam (Keyra)
*Albion (Synapse, Paserov)
*GP03 Dendrobium (Kou)
*GM Cannon II (Keith)
*GM Custom (Burning)
*GM Custom (Bate)
*GM Custom (Monsha)
*GM Cannon II (Adel)
*Zeta Gundam (Kamille)
*Re-GZ BWS (Four)
*Methuss (Fa)
*Super Gundam (Emma)
*Incom & Funnel parts for MP Nu Gundam
*Armed Fortress Orchis parts for Gundam Stamen
*G Defensor Parts for Gundam Mk-II
'''Unit Acquisition (Cobray & Selena):'''
*J-Ark (J, Tomoro)
*Mazinkaiser (Kouji)
*Diana A (Sayaka)
*Great Mazinger (Tetsuya)
*Venus A (Jun)
*Combattler V (Hyoma, Juzo, Daisaku, Chizuru, Kosuke)
*Koutetsu Jeeg (Jeeg)
*Big Shooter (Miwa)
*Shin Getter (Ryoma, Hayato, Benkei)
*Lady Command (Michiru)

|-
| colspan="4" class="fc-std-sc" |'''第４話：地獄門、開く Scenario 4 - The Gates of Hell Open'''

|-
| colspan="4" |'''Victory Condition:'''
*1st Part: Allied Battleship reaches the escape point in 5 turns, All Enemies are defeated in 5 turns
*2nd Part: Defeat all enemies
'''Defeat Condition:'''
*1st Part: Allied Battleship is defeated, Turn 6 starts
*2nd Part: SRX is defeated
'''Skill Point:''' Defeat all enemies in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*SRX (Damaged) (Ryuusei, Rai, Aya)

|-
| colspan="4" class="fc-std-sc" |'''第５話: 地球圏絶対防御線 Scenario 5 - The Earth Sphere’s Absolute Defense Line'''

|-
| colspan="4" |'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' (1) Ally battleship is defeated (2) Any allied unit is defeated '''Skill Point:''' Clear the stage in 6 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Mobieus Zero (Mwu)
*All Char's Counter Attack, Stardust Memory, and Zeta Gundam units are lost <ul><li>Nu Gundam(Amuro)</li><li>Ra Cailum (Bright, Torres)</li><li>MP Nu Gundam (Keyra)</li><li>Albion (Synapse, Paserov)</li><li>GP03 Dendrobium (Kou)</li><li>GM Cannon II (Keith)</li><li>GM Custom (Burning)</li><li>GM Custom (Bate)</li><li>GM Custom (Monsha)</li><li>GM Cannon II (Adel)</li><li>Zeta Gundam (Kamille)</li><li>Re-GZ BWS (Four)</li><li>Methuss (Fa)</li><li>Super Gundam (Emma)</li><li>Jegan (Katz)</li></ul>

|- class="fc-route-h"
|'''Touma Route''' Great Mazinger, Venus A, Boss Borot Steel Jeeg, Big Shooter
|'''Kusuha Route''' Getter Robo G, Lady Command Mazinger Z, Diana A Combattler V
|'''Cobray Route''' ZZ Gundam, ReGZ (BWS) Mobieus Zero
|'''Selena Route'''
|-
| class="fc-route1" |'''第６話：平和、遥か遠く Scenario 6 - A Faraway Peace'''
| class="fc-route2" |'''第６話：北米戦線、異常アリ Scenario 6 - Abnormalities on the North American Front'''
| class="fc-route3" |'''第６話：GUNDAM出撃 Scenario 6 - Gundam, Sortie'''
| class="fc-route4" |'''第６話：ザ・ビギニング Scenario 6 - The Beginning'''

|-
|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Any ally is defeated '''Skill Point:''' Defeat all enemies in 5 turns; Defeat the Yamata no Orochi last '''Secret Requirements:''' '''Unit Acquisition:'''
*GaiGar (Gai)
*Mic Sounders XIII (Mic Sounders XIII)

|'''Victory Condition:''' (1) Ally reaches the designated area; (2) Defeat all enemies '''Defeat Condition:''' Any ally defeated '''Skill Point:''' Reach target location without engaging in combat '''Secret Requirements:''' '''Unit Acquisition:'''
*Mazinkaiser → Mazinger Z (Kouji)
*Shin Getter Robo → Getter Robo G (Ryoma, Hayato, Benkei) 
*Dancouga (Shinobu, Sara, Masato, Ryo)

|'''Victory Condition:'''
*1st Part: Sigu is defeated, Vesalius is defeated
*2nd Part: Defeat all enemies 
'''Defeat Condition:'''
*1st Part: Any ally is defeated
*2nd Part: Any ally is defeated 
'''Skill Point:''' Accomplish either objective in 4 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Clop Class Battleship (Federation Officer)
*Wing Gundam Zero Kai (Heero)
*Gundam Deathscythe Hell Kai (Duo)
*Gundam Sandrock Kai (Quatre)
*Taurus (Hilde)
*Strike Gundam (Kira)

|'''Victory Condition:''' (1) AS Soleares reaches the designated point in 4 turns; (2) Defeat all enemies '''Defeat Condition:''' (1) Begin turn 5 without meeting victory conditions, Any ally is defeated; (2) Any ally is defeated '''Skill Point:''' Defeat all enemies in 4 turns and get the AS Soleares to the target square '''Secret Requirements:''' '''Unit Acquisition:'''
*CGUE (Rau)
*GINN (ZAFT Soldier) x 2
*Vesarius (Ades)

|-
| class="fc-route1" |'''第７話：燃えろ宙！妖花フローラの挑戦 Scenario 7 - Space Burns! The Enchanting Flora’s Challenge!'''
| class="fc-route2" |'''第７話：怒りの獣、野生の咆哮 Scenario 7 - The Wild Roar of the Raging Beast'''
| class="fc-route3" |'''第７話：崩壊の大地 Scenario 7 - Collapsing Land'''
| class="fc-route4" |'''第７話：ワンズ・ジャスティス Scenario 7 - One’s Own Justice'''

|-
|'''Victory Condition:''' 
*1st Part: Defeat all enemies
*2nd Part: Defeat all enemies
'''Defeat Condition:''' 
*1st Part: Any ally defeated
*2nd Part: Any ally defeated
'''Skill Point:''' Defeat all enemies in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*AnRyu (AnRyu)
*KouRyu (KouRyu)

|'''Victory Condition:''' (1) Defeat all enemies; (2) Defeat Dangel '''Defeat Condition:''' Any ally is defeated '''Skill Point:''' Defeat all Zubanzas, Boazan Flying Saucers, and Red Baloms within 4 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Black Wing (Alan)

|'''Victory Condition:''' (1) Defeat all enemies; (2) Archangel reaches the designated point, Defeat all enemies '''Defeat Condition:''' (1) Mwu is defeated; (2) Ally battleship is defeated, Kira or Mwu are defeated '''Skill Point:''' Defeat all enemies in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Strike Gundam (Kira)
*Archangel (Murrue, Natarle)
*Aile, Sword and Launcher Striker packs for Strike Gundam

|'''Victory Condition:''' Any ally reaches the designated point '''Defeat Condition:''' Any ally is defeated '''Skill Point:''' Defeat all enemies in 5 turns and get an allied unit to the target square '''Secret Requirements:''' '''Unit Acquisition:'''
*Altron Gundam (Wufei)
*Gundam Heavyarms Kai (Trowa)
*CGuE (Rau)
*Vesarius (Ades)
*Aegis Gundam (Athrun)
*Blitz Gundam (Nicol)
*Buster Gundam (Dearka)
*Duel Gundam (Yzak)

|-
| class="fc-route1" |'''第８話：立ち上がれ！勇気ある者達 Scenario 8 - Stand Up, People of Courage!'''
| class="fc-route2" |'''第８話：輝け！不死身の勇者 Scenario 8 - Shine, Undying Hero!'''
| class="fc-route3" |'''第８話：誘う声 Scenario 8 - An Inviting Voice'''
| class="fc-route4" |'''第８話：インビジブル・イントルーダー Scenario 8 - Invisible Intruder'''

|-
|'''Victory Condition:''' (1) Defeat all enemies; (2) ZX-02 is defeated '''Defeat Condition:''' (1) Any ally is defeated; (2) Gai is defeated, J is defeated '''Skill Point:''' Defeat all enemies in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*GaiGar → GaoGaiGar
*Mic Sounders XIII gains "Disc P", "Disc M", and "Disc X" attacks
*Goldymarg (Goldymarg)
*HyoRyu (HyoRyu)
*EnRyu (EnRyu)
*Big Volfogg (Big Volfogg)

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' (1) Any ally is defeated; (2) Akira is defeated '''Skill Point:''' Defeat the Bramble (retreats at 4000HP (E) / 6000HP (N) / 8000HP (H)) '''Secret Requirements:''' '''Unit Acquisition:'''
*Raideen (Akira)
*Bluegar (Jinguji, Mari)

|'''Victory Condition:'''
*1st Part: (1) Vesalius is defeated; (2) Defeat all enemies
*2nd Part: (1) Defeat all enemies; (2) Defeat all enemies except Valk Baal 
'''Defeat Condition:'''
*1st Part: Ally battleship is defeated, Seolla or Cobray are defeated
*2nd Part: Any ally is defeated 
'''Skill Point:''' Defeat Aegis, Duel, Buster, and Blitz Gundams in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Zeta Gundam (Kamille)
*Re-GZ BWS (Four)
*Methuss (Fa)
*Super Gundam (Emma)
*Ra Cailum (Bright, Torres)
*MP Nu Gundam (Cobray)
*Werkbau (Cobray)
*G Defensor parts for Gundam Mk-II

|'''Victory Condition:''' Reach turn 6 '''Defeat Condition:''' Any ally is defeated '''Skill Point:''' Defeat all the Jegans '''Secret Requirements:''' '''Unit Acquisition:'''
*CGuE (Rau)
*Vesarius (Ades)
*Aegis Gundam (Athrun)
*Blitz Gundam (Nicol)
*Buster Gundam (Dearka)
*Duel Gundam (Yzak)

|-
| class="fc-route1" |'''第９話：内なる修羅 Scenario 9 - Demons of War Within'''
| class="fc-route2" |'''第９話：再会！ニューヨーク解放戦 Scenario 9 - Reunion! The Battle to Retake New York'''
| class="fc-route3" |'''第９話：正義の在処 Scenario 9 - Where Justice Can Be Found'''
| class="fc-route4" |'''第９話：アベンジャー Scenario 9 - Avenger'''

|-
|'''Victory Condition:''' (1) Defeat all enemies; (2) Defeat Raioh '''Defeat Condition:''' (1) Any ally defeated; (2) Sanger is defeated '''Skill Point:''' Defeat the Bramble in 4 turns (retreats at 4000HP (E) / 6000HP (N) / 8000HP (H)) '''Secret Requirements:''' '''Unit Acquisition:'''
*Dygenguar (Sanger)
*Huckebein Mk-III Trombe (Ratsel)
*Raideen (Akira)
*Bluegar (Jingunji, Mari)
*Mazinger Z (Kouji)
**Mazinger Z (Kouji) and Great Mazinger (Tetsuya) gain the "Double Mazinger Blade" and "Double Burning Fire" combination attacks
*Diana A (Sayaka)
*Getter Robo G (Ryoma, Hayato, Benkei)
*Lady Command (Michiru)
*Combattler V (Hyoma, Juzo, Daisaku, Chizuru, Kosuke)

|'''Victory Condition:''' (1) Defeat all enemies; (2) Dancouga reaches the designated point; (3) Defeated Deathgaia, Dangel, and Warchamedes '''Defeat Condition:''' (1) Shinobu, Kusuha, or Bullet are defeated; (2) Shinobu, Kusuha, Bullet, or Alan are defeated; (3) Alan is defeated '''Skill Point:''' Clear the map in 8 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Black Wing (Alan)
*Dygenguar (Sanger)
*Huckebein Mk-III Trombe (Ratsel)

|'''Victory Condition:''' (1) Vesalius is defeated; Reduce the Muge Battleship under 2000 HP before it reaches the edge of the map '''Defeat Condition:''' (1) Ally battleship is defeated; (2) Muge Battleship reaches the western edge of the map '''Skill Point:''' Defeat all enemies before reducing the Muge Mothership's HP below 2000 or defeating it '''Secret Requirements:''' '''Unit Acquisition:'''

|'''Victory Condition:''' (1) Reduce the Archangel's HP to 50% or less, Defeat all enemies besides the Archangel; (2) Reduce the Varuch Ishar to 4000 HP or less. '''Defeat Condition:''' Any ally is defeated '''Skill Point:''' Defeat the Varuch Ishar (flees at 4000 HP) '''Secret Requirements:''' '''Unit Acquisition:'''
*CGuE (Rau)
*Vesarius (Ades)
*Aegis Gundam (Athrun)
*Blitz Gundam (Nicol)
*Buster Gundam (Dearka)
*Duel Gundam (Yzak)

|-
| class="fc-route1" |'''第１０話：激震の地底帝国 Scenario 10 - Tremors in the Underground Empire'''
| class="fc-route2" |'''第１０話：龍を喰らうもの Scenario 10 - That Which Devours the Dragon'''
| class="fc-route3" |'''第１０話：消えていく光 Scenario 10 - The Fading Light'''
| class="fc-route4" |'''第１０話：グッバイ・フレンズ Scenario 10 - Goodbye, Friends'''

|-
|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' All allies defeated, Science Fortress Lab destroyed '''Skill Point:''' Clear the map without the Science Fortress Lab taking damage '''Secret Requirements:''' '''Unit Acquisition:'''
*Raioh loses the "System LIOH" ability
*Raioh gains the "Rising Meteor" attack
*Dygenguar (Sanger)
*Huckebein Mk-III Trombe (Ratsel)

|'''Victory Condition:''' (1) Sanger is defeated; (2)(3) Defeat all enemies; (4)(5) ZX-02 is defeated '''Defeat Condition:''' (1) Bullet is defeated; (2) Sanger or Rastel are defeated; (3) Any ally is defeated; (4) Guy, Sanger, or Rastel are defeated; (5) Guy, J, Sanger, or Rastel are defeated '''Skill Point:''' Reduce Shin RyuOuKi to below 10000 HP within 3 turns of its arrival '''Secret Requirements:''' '''Unit Acquisition:'''
*Dygenguar (Sanger)
*Huckebein Mk-III Trombe (Ratsel)
*GaiGar (Guy)
*GaoGaiGar (Guy)
*Mic Sounders XIII (Mic Sounders XIII)
*Goldymarg (Goldymarg)
*HyoRyu (HyoRyu)
*EnRyu (Enryu)
*Volfogg (Volfogg)
*Great Mazinger (Tetsuya)
*Venus A (Jun)
*Boss Borot (Boss, Mucha, Nuke)
*Kotetsu Jeeg (Jeeg)
*Big Shooter (Miwa)
*Stealth Gao II parts for GaoGaiGar
*Gunbot parts for Volfogg

|'''Victory Condition:''' (1) Reduce the Blitz Gundam to under 7000HP; (2) The Gamow is defeated; (3) The Gamow is defeated and Imperial Guard are defeated '''Defeat Condition:''' (1)(2) Any ally is defeated; (3) Ally battleship is defeated '''Skill Point:''' Defeat the Gamow (retreats at 4000HP (E) / 6000HP (N) / 8000HP (H)) '''Secret Requirements:''' '''Unit Acquisition:'''
*Qubeley Mk-II (Puru)
*Qubeley Mk-II (Puru Two)
*Hyaku Shiki (Beecha)
*Gundam Mk-II (Elle)
*Jegan (Mondo)
*Megarider (Iino)
*YF-19 (Isamu)
*YF-21 (Guld)

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' (1) Any ally is defeated; (2) Ally battleship is defeated; (3) Ally battleship is defeated, Isamu or Guld are defeated '''Skill Point:''' Clear the map in 6 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Zeta Gundam (Kamille)
*Methuss (Fa)
*ReGZ (Four)
*Super Gundam (Emma)
*Mobius Zero (Mwu)
*Wing Gundam Zero Kai (Heero)
*Gundam Sandrock Kai (Quatre)
*Gundam Deathscythe Hell Kai (Duo)
*Taurus (Hilde)
*ZZ Gundam (Judau)
*ReGZ BWS (Roux)
*Qubeley Mk-II (Puru)
*Qubeley Mk-II (Puru Two)
*Hyaku Shiki (Beecha)
*Gundam Mk-II (Elle)
*Jegan (Mondo)
*Megarider (Iino)
*YF-19 (Isamu)
*YF-21 (Guld)

|-
| class="fc-route1" |'''第１１話：戦場の邂合、そして決別 Scenario 11 - An Battlefield Encounter, and Then a Departure'''
| class="fc-route2" |'''第１１話：新たなる人類 Scenario 11 - A New Mankind'''
| class="fc-route3" |'''第１１話：君と戦場で Scenario 11 - On the Battlefield with You'''
| class="fc-route4" |'''第１１話：パワー・ジャンクション Scenario 11 - Power Junction'''

|-
|'''Victory Condition:''' (1) Defeat all enemies; (2) Defeat Vesalius '''Defeat Condition:''' Ally battleship is defeated, Kira or Mwu are defeated '''Skill Point:''' Defeat all enemies in 7 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Archangel (Murrue)
*Strike Gundam (Kira)
*Moebius Zero (Mwu)
*Stealth Gao II Parts for GaoGaiGar
*Aile, Sword, and Launcher Striker packs for Strike Gundam

|'''Victory Condition:''' (1) Defeat all enemies; (2) Vesalius is defeated '''Defeat Condition:''' (1) Ally battleship is defeated, Kira or Mwu are defeated; (2) Ally battleship is defeated '''Skill Point:''' Defeat all enemies in 7 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Strike Gundam (Kira)
*Mobeius Zero (Mwu)
*Archangel (Murrue, Natarle)
*YF-19 (Isamu)
*YF-21 (Guld)
*Aile, Sword, and Launcher Striker packs for Strike Gundam

|'''Victory Condition:''' (1) Defeat all enemies (2) ZX-02 is defeated '''Defeat Condition:''' (1) Kira is defeated; (2) Any ally is defeated '''Skill Point:''' Defeat all enemies in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Wildburger (Arado)
*Great Mazinger (Tetsuya)
*Venus A (Jun)
*Boss Borot (Boss)
*Dancouga (Shinobu, Sarah, Masato, Ryo)
*Raideen (Akira)
*Bluegar (Jingunji)
*Mazinger Z (Kouji)
*Diana A (Sayaka)
*Getter Robo G (Ryoma, Hayato, Benkei)
*Lady Command (Michiru)
*Star Gaogaigar (Gai)
*Goldymarg (Goldymarg)
*Mic Sounders the 13th (Mic)
*Hyoryu (Hyoryu)
*Enryu (Enryu
*Big Volfogg (Volfogg)

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Defeat all enemies in 7 turns '''Secret Requirements:''' '''Unit Acquisition:'''

|-
| class="fc-route1" |'''第１２話：守るべきモノ Scenario 12 - What You Must Protect'''
| class="fc-route2" |'''第１２話：別れの宇宙 Scenario 12 - Farewells in Space'''
| class="fc-route3" |'''第１２話：ディーンの火 Scenario 12 - The Flames of Deen'''
| class="fc-route4" |'''第１２話：コンクルージョン Scenario 12 - Conclusion'''

|-
|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' All enemies defeated '''Skill Point:''' Defeat all enemies in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Gundam Wing Zero (Heero)
*Gundam Deathscythe Hell Kai (Duo)
*Gundam Sandrock Kai (Quatre)
*Gundam Heavyarms Kai (Trowa)
*Altron Gundam (Wufei)
*Taurus (Hilde)
*Zeta Gundam (Kamille)
*Re-GZ BWS (Four)
*Methuss (Fa)
*Gundam Mk-II (Emma)
*ZZ Gundam (Judau)
*Qubeley Mk-II (Puru)
*Qubeley Mk-II (Puru Two)
*Hyaku Shiki (Beecha)
*Gundam Mk-II (Elle)
*Jegan (Mondo)
*Megarider (Iino)
*YF-19 (Isamu) (After stage)
*YF-21 (Guld) (After stage)
*G Defensor parts for Gundam Mk-II

|'''Victory Condition:''' (1) Defeat all enemies; (2) Defeat Shin RyoOhKi; (3) Defeat the Imperial Guard '''Defeat Condition:''' (1)(2) Any ally is defeated; (3) Ally battleship is defeated '''Skill Point:''' Defeat Shin RyuOhKi before Victory Conditions are met '''Secret Requirements:''' '''Unit Acquisition:'''
*Gundam Wing Zero Kai (Heero)
*Gundam Deathscythe Hell Kai (Duo)
*Gundam Sandrock Kai (Quatre)
*Gundam Heavyarms Kai (Trowa)
*Altron Gundam (Wufei)
*Taurus (Hilde)
*Zeta Gundam (Kamille)
*Re-GZ BWS (Four)
*Methuss (Fa)
*Gundam Mk-II (Emma)
*ZZ Gundam (Judau)
*Qubeley Mk-II (Puru)
*Qubeley Mk-II (Puru Two)
*Hyaku Shiki (Beecha)
*Gundam Mk-II (Elle)
*Jegan (Mondo)
*Megarider (Iino)
*G Defensor parts for Gundam Mk-II

|'''Victory Condition:''' (1) Bramble, Magnum, and Zangaioh are defeated; (2) Defeat all enemies; (3) Defeat Valk Baal '''Defeat Condition:''' (1) Ally battleship is defeated, Arado is defeated; (2) Cobray, Arado or Seolla are defeated; (3) Cobray, Viletta, Sanger, or Rastel are defeated '''Skill Point:''' Clear the map in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Werkbau gains the "Axion Buster" attack
*Gundam Heavyarms Kai (Trowa)
*Altron Gundam (Wufei)
*Dygenguar (Sanger)
*Huckebein Mk-III Trombe (Ratsel)
*R-GUN Powered (Viletta)

|'''Victory Condition:''' (1)(2) ZX-08 is defeated; (3) Varuch Ishar is defeated '''Defeat Condition:''' (1) Ally battleship is defeated, (2) Ally battleship is defeated, J is defeated; (3) Ally battleships is defeated, Selena, Viletta, Sanger, or Rastel are defeated '''Skill Point:''' Defeat ZX-02 in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*J-ARK (J, Tomoro)
*R-GUN Powered (Viletta)
*Dygenguar (Sanger)
*Huckebein Mk-III Trombe (Ratsel)
*Vegalion (Slay)

|-
| colspan="4" class="fc-std-sc" |'''第１３話：もう一度、自らの足で Scenario 13 - Once Again, On Your Feet'''

|-
| colspan="4" |'''Victory Condition:''' ZX-06 is defeated '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Clear the map in 6 turns; Defeat all other enemies before ZX-06 '''Secret Requirements:''' '''Unit Acquisition:'''
*Evangelion Unit 0 Custom (Rei)
*Evangelion Unit 1 (Shinji)
*Evangelion Unit 2 (Asuka)

|-
| colspan="4" class="fc-std-sc" |'''第１４話：オペレーション・ハルパー Scenario 14 - Operation Harper'''

|-
| colspan="4" |'''Victory Condition:''' Reduce Hermoz Ehad's HP to below 120000HP (E) / 90000HP (N) / 80000HP (H) '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Achieve the victory condition in 7 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*HyoRyu (HyoRyu)
*EnRyu (EnRyu)

|-
| colspan="4" class="fc-std-sc" |'''第１５話：遥かなる凱歌 Scenario 15 - A Faroff Victory Song'''

|-
| colspan="4" |'''Victory Condition:''' Defeat the Combine Primeval '''Defeat Condition:''' Ally Battleship is defeated, J is defeated '''Skill Point:''' Defeat all enemies in 7 turns, leaving the combined Primeval for last '''Secret Requirements:''' '''Unit Acquisition:'''
*J-Ark (J, Tomoro)
*ALL units are unavailable until clearing Scenario 18

|-
| colspan="4" class="fc-std-sc" |'''第１６話：導かれる魂、銀河で Scenario 16 - Souls Guided by the Galaxy'''

|-
| colspan="4" |'''Victory Condition:'''
*1st Part: Defeat all enemies
*2nd Part: Defeat all enemies
'''Defeat Condition:'''
*1st Part: Ideon is defeated
*2nd Part: Any ally is defeated
'''Skill Point:''' Defeat all enemies in 4 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Ideon (Cosmo, Kasha, Bess → Moera)
*VF-17S Nightmare (Kinryu)
*VF-17D Nightmare (Gamlin)
*VF-17D Nightmare (Docker)
*Battle 7 (Max, Exedore, Miho, Sally)
*Soloship (Bess)

|-
| colspan="4" class="fc-std-sc" |'''第１７話：ディスコード・ハーモニー Scenario 17 - Discord / Harmony'''

|-
| colspan="4" |'''Victory Condition:''' (1)(2) Defeat the Zig Mac; (3) Defeat FZ-109F Elgarthorn '''Defeat Condition:''' (1) Any ally is defeated; (2) Any ally is defeated, Zig Mac moves next to the Soloship (3) '''Skill Point:''' Meet victory the condition in 4 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Battle 7 can now transform into "Enhanced Attack Mode"
*VF-17D Nightmare (Docker)

|-
| colspan="4" class="fc-std-sc" |'''第１８話：銀河流浪 Scenario 18 - Galactic Wandering'''

|-
| colspan="4" |'''Victory Condition:'''
*1st Part: Defeat FZ-109F Elgarthorn
*2nd Part: Defeat Zig Mac
'''Defeat Condition:'''
*1st Part: Any ally is defeated
*2nd Part: Any ally is defeated
'''Skill Point:''' Meet victory conditions in 3 turns '''Secret Requirements:'''
*Duel Gundam
**Take the Earth Route
*VF-1J S Valkyrie
**Take the Earth Route
*LaGOWE
**Take the Earth Route
'''Unit Acquisition:'''
*VF-17D Nightmare (Physica)
*VF-17S (Kinryu), VF-17D (Gamlin), and VF-17D (Physica) gain the "Diamond Force Attack" combination Attack
*Ideon gains the "Omnidirectional Missile" attack
*All Ideon and Macross 7 units are lost <ul><li>Ideon (Cosmo, Kasha, Moera)</li><li>Soloship (Bess)</li><li>Battle 7 (Max, Exedore, Miho, Sally)</li><li>VF-17S Nightmare (Kinryu)</li><li>VF-17D Nightmare (Physica)</li><li>VF-17D Nightmare (Gamlin)</li>

|}
 

==Stages 19 - 33==
{| width="100%"
|- class="fc-route-h"
| width="50%" |'''Descend to Earth''' Gundam 0083 Gundam Z ZZ Gundam Char's CounterAttack Gundam Wing Gundam SEED Macross 7 Macross Plus Evangelion
| width="50%" |'''Mount a Lunar offensive''' GaoGaiGar Ideon Mazinger (Z, Great) Getter Robo Steel Jeeg Combattler V Gaiking Raideen Dancouga GoShogun

|-
| class="fc-route1" |'''第１９話：宇宙に降る星 Scenario 19 - Stars Falling in Space'''
| class="fc-route3" |'''第１９話：悪夢への招待状 Scenario 19 - A Written Invitation to a Nightmare'''

|-
|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated, Kira is defeated '''Skill Point:''' Destroy all enemies in 6 turns '''Secret Requirements:'''
*Duel Gundam
**Destroy Yzak.
'''Unit Acquisition:'''
*Nu Gundam (Amuro)
*Jegan (Katz)
*MP Nu Gundam (Kayra)
*Incom and Fin Funnel parts for MP Nu Gundam
*Kira unlocks the SEED pilot skill
*Skygrasper
*Ra Cailum (Bright, Torres)

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Destroy the Muge battleship in 6 turns (retreats at 6000HP (E) / 8000HP (N) / 10000 HP (H)) '''Secret Requirements:''' 
'''Unit Acquisition:'''
*Daiku Maryu (Pete, Midori)
*Gaiking (Sanshiro)
*Skylar (Fan Li)
*Bazolar (Yamagatake)
*Nesser (Bunta)

|-
| class="fc-route1" |'''第２０話：強襲、砂漠の虎 Scenario 20 - Assault of the Desert Tiger'''
| class="fc-route3" |'''第２０話：異邦人達の帰還 Scenario 20 - The Foreigners Return'''

|-
|'''Victory Condition:''' Defeat the Lesseps '''Defeat Condition:''' Ally battleship is defeated, Kira is defeated '''Skill Point:''' Defeat the Lesseps in 6 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Kira unlocks the SEED pilot skill
*Albion (Synapse, Paserov)
*Gundam Stamen (Kou)
*GM Cannon II (Keith)
*GM Custom (Burning)
*GM Custom (Bate)
*GM Custom (Monsha)
*GM Cannon II (Adel)
*Gundam GP01fb
*Armed Base Orchis parts for Gundam Stamen

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Destroy Helmut's Muge battleship in 4 turns (retreats at 6000HP (E) / 8000HP (N) / 10000 HP(H)) '''Secret Requirements:''' '''Unit Acquisition:'''
*Ideon (Cosmo, Kasha, Moera)
*Ideon gains the "Ideon Sword" and "Ideon Sword (MAP)" attacks
*Soloship (Bess, Hatari)

|-
| class="fc-route1" |'''第２１話：プリティ・デビル Scenario 21 - Pretty Devil'''
| class="fc-route3" |'''第２１話：裏切りの代償 Scenario 21 - The Cost of Betrayal'''

|-
|'''Victory Condition:'''
*1st Part: Gigil's ship is defeated
*2nd Part: Gigil's ship is defeated 
'''Defeat Condition:'''
*1st Part: Any ally is defeated
*2nd Part: Basara is defeated
'''Skill Point:''' Destroy Gigil before he moves adjacent to Sivil '''Secret Requirements:'''
*LaGOWE
**Waltfeld and Dacosta must both survive and get a combined total of 10 kills or more on the first half of the scenario.
*VF-1J
**Milia must get a total of 10 kills in the first half of the scenario.
'''Unit Acquisition:'''
*VF-17S Nightmare (Kinryu)
*VF-17D Nightmare (Gamlin)
*VF-17D Nightmare (Physica)
*VF-1J S Valkyrie (Milia)
*LaGOWE (Waldfelt)
*BuCUE (Dacosta)
*Skygrasper (Cagalli)
*VF-19 Kai Fire Valkyrie (Basara)
*VF-17S Nighmare (Milia)
*VF-1J S Valkyrie

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Any ally is defeated '''Skill Point:''' Destroy all enemies in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Goshogun (Shingo, Killy, Remi)
*Good Thunder (Sabranth)

|-
| class="fc-route1" |'''第２２話：砂塵の果て Scenario 22 - Beyond the Clouds of Sand'''
| class="fc-route3" |'''第２２話：発動する力、無限大 Scenario 22 - Infinite Activation Power'''

|-
|'''Victory Condition:''' (1) Defeat the Lesseps; (2) Waltfeld is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated '''Skill Point:''' Defeat the Lesseps in 5 turns '''Secret Requirements:'''
*LaGOWE
**Kira must destroy Waltfeld's LaGOWE while in SEED. (Kira has to activate SEED mode before the event that ends the stage.)
'''Unit Acquisition:'''
*Kira unlocks the SEED pilot skill

|'''Victory Condition:''' (1) Soloship reaches the computer facility; (2) Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Get the Soloship to the indicated area in 4 turns without it taking any damage '''Secret Requirements:''' '''Unit Acquisition:'''
*HyoRyu (HyoRyu)
*EnRyu (EnRyu)

|-
| class="fc-route1" |'''第２３話：エモーション・ハイ Scenario 23 - Emotion High'''
| class="fc-route3" |'''第２３話：決戦！地獄の月荒野 Scenario 23 - Decisive Battle in the Hellish Lunar Wilderness!'''

|-
|'''Victory Condition:''' (1) Defeat 2 Ghosts; (2) Defeat all enemies; (3) Basara sings to Sivil, All ZAFT forces are defeated '''Defeat Condition:''' (1) Ally battleship is defeated, Battle 7 is defeated; (2) Ally battleship is defeated, Battle 7 is defeated, Isamu or Guld are defeated; (3) Ally battleship is defeated, Isamu, Guld, or Basara are defeated '''Skill Point:''' Clear the map in 9 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*YF-19's "Full Volley" attacks gains +200 Attack power
*YF-19 and YF-21 gain the "Double Pinpoint Barrier Punch" combination attack
*Battle 7 (Max, Exedore, Miho, Sally)
*VF-19 Kai Fire Valkyrie (Basara)
*Mazinkaiser
*Shin Getter Robo

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Clear the map in 9 turns '''Secret Requirements:''' '''Unit Acquisition:'''

|-
| colspan="2" class="fc-std-sc" |'''第２４話：戦神の星で Scenario 24 - On the Planet of the War God'''

|-
| colspan="2" |'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' (1) Any ally is defeated; (2) Ally battleship is defeated '''Skill Point:''' Destroy all enemies in 3 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*VF-19 Kai Fire Valkyrie (Basara)
*VF-11 MAXL Kai (Mylene)
*VF-17 Kai Nightmare (Ray, Veffidas)
*Tallgeese III (Zechs)
*Taurus (Noin)
*Voltes V (Kenichi, Ippei, Daijiroh, Hiyoshi, Megumi)
*Daimos (Kazuya)
*Garuba FX-II (Kyoshiro, Nana)

|-
| colspan="2" class="fc-std-sc" |'''第２５話：選ばれし者、選びし者 Scenario 25 - Those Who Are Chosen, Those Who Choose'''

|-
| colspan="2" |'''Victory Condition:''' (1) Hermos is defeated; (2) Zifrud is defeated '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Clear the map in 8 turns '''Secret Requirements:''' '''Unit Acquisition:'''

|-
| colspan="2" class="fc-std-sc" |'''第２６話：かりそめの旅人 Scenario 26 - Transitory Traveler'''

|-
| colspan="2" |'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated, Temjin, Fei Yen, or Apharmd are defeated '''Skill Point:''' Destroy all enemies in 3 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Temjin 747J (Chief)
*Fei Yen the Knight (Fei)
*Apharmd The Hatter (The Hatter)

|-
| colspan="2" class="fc-std-sc" |'''第２７話：勇気ある者達の誓い Scenario 27 - The Oath of the Courageous'''

|-
| colspan="2" |'''Victory Condition:'''
*1st Part: Defeat all enemies
*2nd Part: (1) Defeat all enemies; (2) Defeat the Z-Master within (10 (E) / 7 (N) / 5 (H)) turns 
'''Defeat Condition:'''
*1st Part: Ally battleship is defeated, Gai is defeated
*2nd Part: (1) Ally battleship is defeated, Gai or J are defeated; (2) (10 (E) / 7 (N) / 5 (H)) turns have passed, Ally battleship is defeated, Gai or J are defeated 
'''Skill Point:''' Destroy all enemies in 7 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*J-Ark (J, Tomoro)

|-
| colspan="2" class="fc-std-sc" |'''第２８話：いつか星の海へ Scenario 28 - Someday, In the Sea of Stars'''

|-
| colspan="2" |'''Victory Condition:''' (1)(2) Defeat the Zonder Robo; (3) Defeat the Zonder Robo within 6 attacks from Star GaoGaiGar; (4)(5) Defeat all enemies '''Defeat Condition:''' (1) Galeon is defeated; (2) Ally battleship is defeated, Galeon is defeated; (3) Ally battleship or Gai are defeated, Zonder Robo is not defeated within 6 attacks from Star GaoGaiGar (4) Main Character is defeated; (5) Ally battleship is defeated '''Skill Point:''' Destroy the Zonuder Robo in 5 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Galeon (Galeon)
*Star GaoGaiGar/GaoGaiGar (Gai)
*YF-19 (Isamu)
*YF-21 (Guld)
*Battle 7 (Max)
*VF-17S Nightmare (Milia)
*VF-17D Nightmare (Gamlin)
*VF-17D Nightmare (Physica)
*VF-19 Kai Fire Valkyrie (Basara)
*VF-11 MAXL Kai (Mylene)
*VF-17 Kai Nightmare (Ray, Veffidas)
*HyoRyu (HyoRyu)
*EnRyu (EnRyu)
*Goldymarg (Goldymarg)
*Volfogg (Volfogg)
*Mic Sounders XIII (Mic Sounder XIII)
*Ideon (Cosmo, Kasha, Moera)
*Soloship (Bess, Hatari)
*Star GaoGaiGar (Guy, Choryujin, Goldymarg, Mic, Volfogg)
*Dygenguar (Sanger)
*Aussenseiter (Ratsel)
*R-Blade Custom (Ryusei)
*R-Gun Powered (Viletta)

|-
| colspan="2" class="fc-std-sc" |'''第２９話：押された烙印 Scenario 29 - Branded with the Mark'''

|-
| colspan="2" |'''Victory Condition:''' (1)(2) Defeat all enemies '''Defeat Condition:''' (1) Ally battleship is defeated; (2) Ally battleship is defeated, Cagalli is defeated '''Skill Point:''' Destroy all enemies in 6 turns '''Secret Requirements:'''
*Destroid Monster
**Take the Space Route
*FBz-99G
**Take the Space Route
*Strike Rouge IWSP
**Cagalli must have 30 or more kills by the end of this stage.
***Take the Alaska Route
*Duel Gundam
**Take the Alaska Route
'''Unit Acquisition:'''
*GaoFighGar (Guy)
*HyoRyu (HyoRyu)
*EnRyu (EnRyu)
*Goldymarg (Goldymarg)
*Volfogg (Volfogg)/Big Volfogg (Big Volfogg)
*Mic Sounders XIII (Mic Sounders XIII)
*AnRyu (AnRyu)
*KouRyu (KouRyu)
*Ra Cailum (Bright, Torres)

|- class="fc-route-h"
|'''Head to Alaska''' Gundam (0083, Z, ZZ, CCA, Wing, SEED) Daitarn 3 Mazinger (Z, Great) Steel Jeeg Voltes V Daimos Dancouga Evangelion
|'''Go to Space''' GaoGaiGar Ideon Getter Robo Combattler V GaiKing Raideen Goshogun Macross (DYRL, 7, Plus) Virtual On

|-
| class="fc-route2" |'''第３０話：終わらない閃光 Scenario 30 - Unending Flashes of Light'''
| class="fc-route4" |'''第３０話：ロスト・ディーヴァ Scenario 30 - Lost Diva'''

|-
|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated, Kira is defeated '''Skill Point:''' Clear the map in 7 turns '''Secret Requirements:'''
*Strike Rouge IWSP
**Mwu must defeat Dearka
**After the event, Kira must defeat Athrun while both are in SEED.
'''Unit Acquisition:'''
*Skygrasper (Cagalli)
*Strike Gundam (Kira)
*Kira unlocks the SEED pilot skill
*Cagalli unlocks the SEED pilot skill (needs verification)
*Archangel loses Natarle as a subpilot

|'''Victory Condition:''' (1)(2) Defeat all enemies '''Defeat Condition:''' (1) Any ally is defeated: (2) Ally battleship is defeated, Fire Bomber, Diamond Force, or Skull Squadron are defeated '''Skill Point:''' In 6 turns, destroy Glavil and Gavil. You must destroy Glavil before Gavil '''Secret Requirements:'''
*Gavil and FBz-99G Zaubergeran
**Gamlin must defeat Gavil
'''Unit Acquisition:'''
*YF-19 (Isamu) (Before Deploying)
*YF-21 (Guld) (Before Deploying)
*VF-1S S Valkyrie (Focker)
*VF-1S S Valkyrie (Hikaru)
*VF-1A S Valkyrie (Kakizaki)
*VF-17D Nightmare (Gamlin)
*VF-17D Nightmare (Physica)
*VF-19 Kai Fire Valkyrie (Basara)
*VF-11 MAXL Kai (Mylene)
*VF-17 Kai Nightmare (Ray, Veffidas)

|-
| class="fc-route2" |'''第３１話：青き清浄なる世界のために Scenario 31 - For Our Blue & Pure World'''
| class="fc-route4" |'''第３１話：禁断の惑星へ Scenario 31 - To the Forbidden Planet'''

|-
|'''Victory Condition:''' (1) Defeat all enemies; (2)(3) Defeat all Mobile Dolls, All ZAFT Units retreat '''Defeat Condition:''' (1)(2) Ally battleship is defeated, Heero is defeated; (3) Ally battleship is defeated '''Skill Point:''' Do not let a single ZAFT machine get shot down '''Secret Requirements:'''
*Duel Gundam
**Yzak must survive the scenario.
'''Unit Acquisition:'''
*Archangel gains Newman as a subpilot
*Freedom Gundam (Kira)
*Daitarn 3 (Banjo)
*Black Wing (Alan)

|'''Victory Condition:'''
*1st Part: Defeat all enemies
*2nd Part: Defeat Gepelnitch
'''Defeat Condition:'''
*1st Part: Any ally is defeated
*2nd Part: Ally battleship is defeated, Basara or Gamlin are defeated
'''Skill Point:''' In 7 turns, destroy Glavil and Gavil and make Gepelnitch's ship retreat (at 50,000 HP) '''Secret Requirements:'''
*Destroid Monster
**Get the Skill Point on this stage.
*Gavil and FBz-99G Zaubergeran
**Gamlin must defeat Gavil 
'''Unit Acquisition:'''
*Destroid Monster

|-
| class="fc-route2" |'''第３２話：守護神の巫女 Scenario 32 - Priestess of the Guardian God'''
| class="fc-route4" |'''第３２話：インフィニティ・ソウル Scenario 32 - Infinity Soul'''

|-
|'''Victory Condition:''' (1)(2) Defeat all enemies '''Defeat Condition:''' Any Ally is defeated; Ally battleship is defeated, Sanger or Rastel are defeated '''Skill Point:''' In 5 turns, destroy the General of Hell or Flora. '''Secret Requirements:''' '''Unit Acquisition:'''
*Dygenguar (Sanger)
*Assenseiter (Ratsel)

|'''Victory Condition:''' (1) Valgo is defeated; (2)(3) Defeat all enemies '''Defeat Condition:''' (1) Mylene, Ray, or Gamlin are defeated; (2) Basara, Mylene, Ray, or Gamlin are defeated; (3) Ideon is defeated '''Skill Point:''' In 6 turns, destroy Valgo '''Secret Requirements:'''
*Gavil and FBz-99G Zaubergeran
**Gamlin must defeat Gavil 
'''Unit Acquisition:'''
*VF-17D Nightmare → VF-17S Nightmare (Gamlin)
*VF-17D Nightmare (Docker)
**VF-17S (Gamlin), VF-17D (Physica) and VF-17D (Docker) gain the "Diamond Force Attack" combination attack
*VF-19 Kai Fire Valkyrie, VF-11 MAXL Kai, and VF-17 Kai Nightmare gain the "Sound Booster" mech ability
**All VF-19 Kai Fire Valkyrie SB Songs gain (MAP) and (ALL) combination attack variants when Sound Booster activates.
**All VF-11 MAXL Kai SB Songs gain (MAP) and (ALL) combination attack variants when Sound Booster activates.
*Ideon (Cosmo, Kasha, Moera)
** Ideon gains the "Ideon Sword" and "Ideon Sword (MAP)" attacks when IDE gauge is full, and HP is below 30%
*Soloship (Bess, Hatari)

|-
| class="fc-route2" |'''第３３話：暁への脱出 Scenario 33 - Escape to Daybreak'''
| class="fc-route4" |'''第３３話：受け継ぎし遺産 Scenario 33 - The Successor's Inheritance'''

|-
|'''Victory Condition:''' (1)(2) Defeat all enemies besides the Albion '''Defeat Condition:''' (1) Ally battleship is defeated, Kira, Shinobu, or Alan are defeated, Albion is defeated; (2) Kira, Shinobu, Alan, Mwu, or Cagalli are defeated '''Skill Point:''' In 8 turns, destroy all enemies except the Albion '''Secret Requirements:''' '''Unit Acquisition:'''
*Strike Gundam (Mwu)
*Strike Rouge (Cagailli)
*M1 Astray (Juri)
*M1 Astray (Mayura)
*M1 Astray (Asagi)
*Justice Gundam (Athrun)
*Buster Gundam (Dearka)
*Mazinger Z gains the "Giant Swing Rocket Punch" attack
*Great Mazinger gains the "Great Booster" attack
*Koutetsu Jeeg stats are enhanced and can transform into Jeeg Panzeroid
*Dancouga and Black Wing can combine into Final Dancouga.

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated, Akira or Jinguji are defeated '''Skill Point:''' In 8 turns, destroy Etzira, Valgo, Glavil, Gabro Zan, and Gije '''Secret Requirements:''' '''Unit Acquisition:'''
*VF-1A S Valkyrie (Kakizaki)
*Raideen gains the Mutron Open mech ability
*Ideon (Cosmo, Kasha, Moera)
*Soloship (Bess, Hatari)
*Battle 7 (Max, Exedore, Miho, Sally)
*VF-1S S Valkyrie (Fokker)
*VF-1S S Valkyrie (Hikaru)
*VF-1A S Valkyrie (Kakizaki)
*YF-19 (Isamu)
*YF-21 (Guld)
*VF-19 Kai Fire Valkyrie (Basara)
*VF-11 MAXL Kai (Mylene)
*VF-17 Kai Nightmare (Ray, Veffidas)
*VF-17S Nightmare (Gamlin)
*VF-17D Nightmare (Physica)
*VF-17D Nightmare (Docker)

|}
 

==Stages 34 - 44==
{| width="100%"
|- class="fc-route-h"
| width="25%" |'''Touma Route'''
| width="25%" |'''Kusuha Route'''
| width="25%" |'''Cobray Route'''
| width="25%" |'''Selena Route'''

|-
| class="fc-route1" |'''第３４話：武人の心、その意味 Scenario 34 - Why a Warrior Fights'''
| class="fc-route2" |'''第３４話：怒りの強念者 Scenario 34 - The Wrath of a Esper'''
| class="fc-route3" |'''第３４話：虚ろな魂の捕囚 Scenario 34 - Captivity of the Hollow Soul'''
| class="fc-route4" |'''第３４話：ベトレイヤー Scenario 34 - Betrayer'''

|-
|'''Victory Condition:'''
*1st Part: (1)(2) Defeat all enemies
*2nd Part: Bemidoban is defeated 
'''Defeat Condition:'''
*1st Part: (1) Ally battleship is defeated; (2) Ally battleship is defeated, Touma is defeated
*2nd Part: Touma is defeated
'''Skill Point:''' Defeat all enemies within 6 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Raioh (Touma)
*Mazinger Z, Great Mazinger and Getter Dragon gain the "F Dynamic Special" combination attack

|'''Victory Condition:'''(1)(2) Shin RyuOhKi is defeated; (3)(4) Bemidoban and Shmuel are defeated '''Defeat Condition:''' (1) Any ally is defeated; (2) Kusuha is defeated; (3) Kusuha is defeated, Ally battleship is defeated; (4) Ally battleship is defeated '''Skill Point:''' Destroy the Bemidoban (retreats (8000 (E) / 10000 (N) / 12000 (H)) HP) '''Secret Requirements:''' '''Unit Acquisition:'''
*Mazinger Z, Great Mazinger and Getter Dragon gain the "F Dynamic Special" combination attack
*Dygenguar (Sanger)
*Aussenseiter (Ratsel)

|'''Victory Condition:''' Shin RyuOhKi is defeated '''Defeat Condition:''' Ally battleship is defeated, Cobray, Arad, or Seolla are defeated '''Skill Point:''' Defeat Shin RyuOuKi within 6 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Werkbau (Cobray)
*Mazinger Z, Great Mazinger and Getter Dragon gain the "F Dynamic Special" combination attack

|'''Victory Condition:''' (1) Shmuel is defeated; (2)(3) Bemidoban defeated Shin RyuOhKi '''Defeat Condition:''' (1) Selena is defeated; (2) Ally battleship is defeated, Selena is defeated; (3) Ally battleship is defeated '''Skill Point:''' Bemidoban and Shin RyuOuKi shot down. Both flee when below (8000 (E) / 10000 (N) / 12000 (H)) HP. '''Secret Requirements:''' '''Unit Acquisition:'''
*Mazinger Z, Great Mazinger and Getter Dragon gain the "F Dynamic Special" combination attack
*Alterion (CF) (Ibis, Tsugumi)
*AS Soleares (Selena, Elma) is unavailable during the intermission

|-
| class="fc-route1" |'''第３５話：闘志、誰がために Scenario 35 - For Whom the Fighting Spirit Burns'''
| class="fc-route2" |'''第３５話：魂、久遠に Scenario 35 - The Soul, Into Eternity'''
| class="fc-route3" |'''第３５話：THE GUN OF DIS Scenario 35 - THE GUN OF DIS'''
| class="fc-route4" |'''第３５話：クロージング・ハート Scenario 35 - Closing Heart'''

|-
|'''Victory Condition:''' (1)(2) Defeat all enemies '''Defeat Condition:''' (1) Touma is defeated; (2) Ally battleship is defeated, Touma, Sanger, or Rastel are defeated '''Skill Point:''' Defeat all enemies within 4 turns of allied reinforcements arriving. '''Secret Requirements:''' '''Unit Acquisition:'''
*DaiRaioh(Touma)
*Dygenguar (Sanger)
*Aussenseiter (Ratsel)

|'''Victory Condition:''' (1)(2)(3) Shin RyuOhKi is defeated '''Defeat Condition:''' (1) Kusuha or Bullet are defeated; (2) Kusuha is defeated; (3) Ally battleship is defeated, Kusuha is defeated '''Skill Point:''' Destroy Shin RyuOhKi within 6 turns of Varuch Ben and Ishar's arrival, destroying them first. '''Secret Requirements:''' '''Unit Acquisition:'''
*GouRyu Kai (Kusuha)
*Raiko Kai (Bullet)
*Shin RyuKoOh (Kusuha, Bullet)
*Dygenguar (Sanger)
*Aussenseiter (Ratsel)

|'''Victory Condition:''' (1)(2) Bemidoban or Shmuel are defeated; (3) ??? is defeated; (4) Valk Baal is defeated '''Defeat Condition:''' (1) Cobray is defeated, (2)(3)(4) Ally battleship is defeated, Cobray is defeated '''Skill Point:''' Defeat the Bemidoban within 5 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Varuch Ben (Cobray)
*Dis Astranagant (Cobray)

|'''Victory Condition:''' (1)(2) Defeat all enemies '''Defeat Condition:''' (1) Selena is defeated; (2) Ally battleship is defeated '''Skill Point:''' Map cleared within 7 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Eslim (Selena)
*Alterion (CF) replaces Tsugumi with Slay as a Subpilot

|-
| colspan="4" class="fc-std-sc" |'''第３６話：激突！勇者VS勇者！ Scenario 36 - Clash! Brave vs. Brave!'''

|-
| colspan="4" |'''Victory Condition:'''
*1st Part: Defeat all enemies
*2nd Part: Ally battleship is defeated
'''Defeat Condition:'''
*1st Part: Star GaoGaiGar is defeated
*2nd Part: Gai is defeated
'''Skill Point:''' Defeat all enemies within 6 turns. '''Secret Requirements:'''
*EVA-01 F-Type Equipment
**Shinji must defeat Ramiel on the first part of this scenario.
*Early Nu Gundam HWS
**Amuro must have 60 or more kills by the end of the scenario.
*GP-02A
**Burning, Monsha, Bate, and Adel must have a combined killcount of 100 or more by the end of the scenario.
*Nuclear Bazooka
**Meet the requirements for GP-02A
*Black Getter
**Michiru must have 20 kills or more by the end of the scenario.
'''Unit Acquisition:'''
*Gundam GP02
*Megarider
*Re-GZ BWS
*MP Nu Gundam
*Black Getter
*VF-1S S Valkyrie (Fokker)
*VF-1S S Valkyrie (Hikaru)
*VF-1A S Valkyrie (Kakizaki)
*VF-1J S Valkyrie
*YF-19 (Isamu)
*YF-21 (Guld)
*Battle 7 (Max)
*VF-19 Kai Fire Valkyrie (Basara)
*VF-11 MAXL Kai (Mylene)
*VF-17 Kai Nightmare (Ray)
*VF-17S Nightmare (Gamlin)
*VF-17D Nightmare (Physica)
*VF-17D Nightmare (Docker
*Soloship (Bess, Hatari)
*Ideon (Cosmo, Kasha, Moera)

|-
| colspan="4" class="fc-std-sc" |'''第３７話：果て無き旅路の始まり Scenario 37 - The Beginning of an Unending Journey'''

|-
| colspan="4" |'''Victory Condition:''' (1) Defeat all enemies; (2)(3) Devariim is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated; (3) Ally battleship is defeated, Bundle, Cutnall, or Kernagul are defeated
'''Skill Point:''' All enemies destroyed within 6 turns, with Devariim being last. '''Secret Requirements:''' '''Unit Acquisition:'''
*Heavy Weapons System parts for Nu Gundam
*Evangelion Unit 0 Custom gains the "N2 Mine" MAP attack
*Evangelion Unit 1 gains the "Magoroku E Sword" attack
*Gunbuster (Noriko)
*Sizzler Black (Jung)
*Eltrium (Tashiro, Deputy Chief)
*Bundle Ship (Bundle)
*Cutnall Ship (Cutnall)
*Kernagul Ship (Kernagul)

|- class="fc-route-h"
| colspan="2" |'''Go with the Soloship''' Gundam (0083, Zeta, ZZ, CCA, Wing, SEED) Getter Robo Raideen Daitarn 3 Evangelion Ideon GaoGaiGar
| colspan="2" |'''Go with the Battle 7''' Mazinger (Z, Great) Macross (DYRL, 7, Plus) Steel Jeeg Combattler V Voltes V Gunbuster Daimos Gaiking Goshogun Dancouga Virtual On

|-
| colspan="2" class="fc-route1" |'''第３８話：運命の炎の中で Scenario 38 - Within the Fires of Destiny'''
| colspan="2" class="fc-route3" |'''第３８話：戦火は星の瞬きと Scenario 38 - The Fires of War Among the Twinkling Stars'''

|-
| colspan="2" |'''Victory Condition:'''
*1st Part: Enemy Battleship is defeated
*2nd Part: (1) Defeat all enemies; (2) Dalam's Ship is defeated
'''Defeat Condition:'''
*1st Part: Ally battleship is defeated, Ideon is defeated
*2nd Part: (1) Ally battleship is defeated; (2) Ally battleship is defeated, Cosmo is defeated
'''Skill Point:''' Clear the map within 7 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Ideon loses Moera as a subpilot
*Ideon gains the "Ideon Gun" attack

| colspan="2" |'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Defeat all enemies within 6 turns. '''Secret Requirements:''' '''Unit Acquisition:'''

|-
| colspan="2" class="fc-route1" |'''第３９話：果てに待つもの Scenario 39 - What Awaits at the End'''
| colspan="2" class="fc-route3" |'''第３９話：ただ母星のために Scenario 39 - All for the Motherworld'''

|-
| colspan="2" |'''Victory Condition:''' (1)(2)Gabro Zan is defeated '''Defeat Condition:''' (1) Ally battleship is defeated, Ryouma, Hayato, Benkei, or Michiru are defeated; (2) Ally battleship is defeated, Ryouma, Hayato, Benkei, or Cosmo are defeated '''Skill Point:''' Destroy all Buff Clan ships within 8 turns, saving Gabro Zan for last. '''Secret Requirements:''' '''Unit Acquisition:'''
* Ideon gains Gije as a subpilot
* Shin Getter-1 gains the "Shin Shine Spark" attack

| colspan="2" |'''Victory Condition:''' Heinel is defeated '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Within 7 turns, defeat all enemies, then defeat Heinel and Richter (Richter must be defeated before Heinel) '''Secret Requirements:''' '''Unit Acquisition:'''

*Goshogun gains the "GoFlasher Special" attack

|-
| colspan="2" class="fc-route1" |'''第４０話：勇者王、最後の刻！ Scenario 40 - The King of Brave’s Final Hour!'''
| colspan="2" class="fc-route3" |'''第４０話：勇気、果つる時… Scenario 40 - When Courage Fails...'''

|-
| colspan="2" |'''Victory Condition:'''
*1st Part: Defeat all enemies
*2nd Part: Ally battleship is defeated
'''Defeat Condition:'''
*1st Part: Defeat all enemies
*2nd Part: Gai is defeated
'''Skill Point:''' Defeat all enemies within 6 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*All GaoGaiGar units are lost

| colspan="2" |'''Victory Condition:''' (1)(2)(3) Defeat all enemies '''Defeat Condition:''' (1) Gai is defeated; (2) Ally battleship is defeated, Gai is defeated; (3) Ally battleship is defeated '''Skill Point:''' Defeat all enemies within 7 turns, with Palparepa Plus being the last one. '''Secret Requirements:''' '''Unit Acquisition:'''
*GaoFighGar (Gai)
*All GaoGaiGar units are lost

|-
| colspan="4" class="fc-std-sc" |'''第４１話：銀河が消滅する日 Scenario 41 - The Day the Galaxy is Extinguished'''

|-
| colspan="4" |'''Victory Condition:''' (1) Defeat all enemies; (2) GaoFighGar is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated, J is defeated '''Skill Point:''' GaoFighGar shot down by turn 7. '''Secret Requirements:'''
*Gije & Ganga Rube
**When given the option, choose to meet the opponent's challenge (first option).
'''Unit Acquisition:'''
*J-Ark (J, Tomoro)
|-
| colspan="4" class="fc-std-sc" |'''第４２話：超勇者黙示録 Scenario 42 - The Super Brave Apocalypse'''

|-
| colspan="4" |'''Victory Condition:'''
*1st Part: Defeat all enemies
*2nd Part: Genesis GaoGaiGar reaches the designated point in 4 turns
'''Defeat Condition:'''
*1st Part: Gai or J are defeated
*2nd Part: Ally battleship is defeated, Gai is defeated, 5th turn is reached
'''Skill Point:''' All enemies shot down by turn 7. '''Secret Requirements:'''
* J-Phoenix & Renais (Sub Pilot)
**Have J defeat Pia Decem on the first part of the stage. Defeat Pia Decem again to gain the attack.
'''Unit Acquisition:'''
* King J-der gains the "J-Phoenix" attack, and gains Renais as a sub-pilot
**Koryuu and Anryuu lose the "Renais Support Attack" attacks
*Genesic GaoGaiGar (Gai)
*J-Ark (J, Tomoro)
** Renais also is a sub-pilot if the conditions are met in the first part of the stage
*Goldymarg (Goldymarg)
*Big Volfogg (Volfogg)
*TenRyuJin (TenRyuJin)
*KoRyu (KoRyu)
*AnRyu (AnRyu)
*EnRyu (EnRyu)
*HyoRyu (HyoRyu)
*Mic Sounder XIII (Mic Sounder XIII)

|- class="fc-route-h"
|'''Touma Route'''
|'''Kusuha Route'''
|'''Cobray Route'''
|'''Selena Route'''

|-
| class="fc-route1" |'''第４３話：閉ざされた世界で Scenario 43 - In a Closed-Off World'''
| class="fc-route2" |'''第４３話：真の龍神 Scenario 43 - The True Dragon God'''
| class="fc-route3" |'''第４３話：人形たちの宴 Scenario 43 - The Doll’s Banquet'''
| class="fc-route4" |'''第４３話：サイレント・クライ Scenario 43 - Silent Cry'''

|-
|'''Victory Condition:'''
*1st Part: (1) Defeat all enemies; (2) Vaikran is defeated, Houle is defeated
*2nd Part: Baran is defeated
'''Defeat Condition:'''
*1st Part: (1) Ally battleship is defeated, Touma or Ryusei are defeated; (2) Ally battleship is defeated, Ryusei is defeated
*2nd Part: Touma is defeated
'''Skill Point:''' Defeat the Bemidoban within 5 turns. '''Secret Requirements:''' '''Unit Acquisition:'''

|'''Victory Condition:''' (1) Defeat Shin RyuOhKi; (2) Vaikran is defeated, Houle is defeated '''Defeat Condition:''' (1) Kusuha or Ryusei are defeated; (2) Ally battleship is defeated, Ryusei is defeated '''Skill Point:''' Defeat Shin RyuOhKi within 5 turns. '''Secret Requirements:''' '''Unit Acquisition:'''

|'''Victory Condition:'''
*1st Part: (1) Defeat all enemies; (2) Vaikran is defeated, Houle is defeated
*2nd Part: Valk Baal is defeated
'''Defeat Condition:'''
*1st Part: (1)(2) Ally battleship is defeated, Ryusei is defeated
*2nd Part: Cobray is defeated
'''Skill Point:''' Defeat the Bemidoban within 5 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Dis Astranagant (Cobray) is unavailable during the intermission

|'''Victory Condition:''' (1) Defeat all enemies; (2)(3) Vaikran is defeated, Houle is defeated'''Defeat Condition:''' (1)(2) Ally battleship is defeated, Selena, Ibis, or Ryusei are defeated (3) Ryusei is defeated'''Skill Point:''' Defeat the Bemidoban within 5 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*AS Alegrias (Selena, Elma?) Is unavailable until the next stage

|-
| class="fc-route1" |'''第４４話：闘志、未来のために Scenario 44 - Fighting Spirit, for the Future'''
| class="fc-route2" |'''第４４話：四神招魂、ここに Scenario 44 - The Four Gods Souls, Gather Here'''
| class="fc-route3" |'''第４４話：鋼の戦神 Scenario 44 - The Steel War God'''
| class="fc-route4" |'''第４４話：マイホーム・マイフレンズ Scenario 44 - My Home, My Friends'''

|-
|'''Victory Condition:'''
*1st Part: Vaikran is defeated
*2nd Part: (1)(2) Vaikran is defeated
'''Defeat Condition:'''
*1st Part: Ally battleship is defeated, Ryusei is defeated
*2nd Part: (1) Touma or Lyria are defeated; (2) Touma, Baran, or Lyria are defeated
'''Skill Point:''' Destroy the Vaikran within 5 turns. '''Secret Requirements:'''
*VF-19F Excaliburs
**Max must have a total of 60 or more kills by the end of the scenario, if you do not pick the Go to Varauta route.
*Gije & Ganga Rube
**You must pick the Go To Bozoan Route.
'''Unit Acquisition:'''
* DaiRaioh gains the "Jinrai" attack 
*Banpreios (Ryuusei, Rai, Mai)
*Dygenguar (Sanger)
*Aussenseiter (Ratsel)
*Shumel (Lyria)
*Bemidoban (Baran)

|'''Victory Condition:'''
*1st Part: Vaikran is defeated
*2nd Part: (1)(2) Vaikran is defeated
'''Defeat Condition:'''
*1st Part: Kusuha or Ryusei are defeated
*2nd Part: (1) Ally battleship is defeated, Kusuha is defeated; (2) Kusuha, Bullet, or Lyria are defeated
'''Skill Point:''' Destroy the Vaikran within 5 turns. '''Secret Requirements:'''
*VF-19F Excaliburs
**Max must have a total of 60 or more kills by the end of the scenario, if you do not pick the Go to Varauta route.
*Gije & Ganga Rube
**You must pick the Go To Bozoan Route.
'''Unit Acquisition:'''
*Banpreios (Ryuusei, Rai, Mai)
*Dygenguar (Sanger)
*Aussenseiter (Ratsel)
*Shumel (Lyria)
*Shin RyuKoOh can now transform into Shin KoRyuOh

|'''Victory Condition:'''
*1st Part: (1) Defeat all enemies; (2) Vaikran is defeated
*2nd Part: Defeat all enemies
'''Defeat Condition:'''
*1st Part: (1)(2) Ally battleship is defeated, Ryusei, Arad or Seola are defeated
*2nd Part: Ally battleship is defeated, Cobray or Lyria are defeated
'''Skill Point:''' Destroy the Vaikran within 3 turns of its arrival. '''Secret Requirements:'''
*VF-19F Excaliburs
**Max must have a total of 60 or more kills by the end of the scenario, if you do not pick the Go to Varauta route.
*Gije & Ganga Rube
**You must pick the Go To Bozoan Route.
'''Unit Acquisition:'''
*Dis Astranagant (Cobray)
*Banpreios (Ryuusei, Rai, Mai)
*Dygenguar (Sanger)
*Aussenseiter (Ratsel)
*Shumel (Lyria)

|'''Victory Condition:'''
*1st Part: (1) Valk Isher is defeated; (2) Vaikran is defeated
*2nd Part: (1)(2) Vaikran is defeated
'''Defeat Condition:'''
*1st Part: (1)(2) Ally battleship is defeated, Ryusei or Ibis are defeated
*2nd Part: (1) Ally battleship is defeated, Selena, Ibis, or Lyria are defeated; (2) Selena or Lyria are defeated
'''Skill Point:''' Destroy the Vaikran within 3 turns of its arrival. '''Secret Requirements:'''
*VF-19F Excaliburs
**Max must have a total of 60 or more kills by the end of the scenario, if you do not pick the Go to Varauta route.
*Gije & Ganga Rube
**You must pick the Go To Bozoan Route.
'''Unit Acquisition:'''
*Banpreios (Ryuusei, Rai, Mai)
*Dygenguar (Sanger)
*Aussenseiter (Ratsel)
*Shumel (Lyria)
*Alterion (CF) replaces Slay with Tsugumi as a subpilot
*Vegalion (Slay)
**Alterion (CF) and Vegalion can combine into Hyperion

|}
 

==Stages 45 - 48==
{| width="100%"
|- class="fc-route-h"
| colspan="2" |'''Go to Earth'''
| colspan="2" |'''Go to Space'''

|- class="fc-route-h"
| width="25%" |'''Search for Irui''' Mazinger (Z, Great) Getter Robo Kotetsu Jeeg Gaiking Dancouga
| width="25%" |'''Fight against ZAFT''' Gundam (0083, Z, ZZ, CCA) Gundam Wing Gundam SEED Evangelion
| width="25%" |'''Go to Varauta''' Macross (DYRL, 7, Plus) GoShogun Daitarn 3 Gunbuster
| width="25%" |'''Go to Boazan''' Ideon Combattler V Voltes V Daimos Raideen GaoGaiGar Virtual On

|-
| class="fc-route1" |'''第４５話：とらわれの心、叫ぶ時 Scenario 45 - When the Captive Heart Cries Out'''
| class="fc-route2" |'''第４５話：忍び寄る終焉 Scenario 45 - Creeping Death'''
| class="fc-route3" |'''第４５話：悪夢の突入作戦 Scenario 45 - Charging into a Nightmare'''
| class="fc-route4" |'''第４５話：もう一つの母星ボアザン Scenario 45 - Another Mother Planet - Boazan'''

|-
|'''Victory Condition:''' (1) Defeat all enemies: (2) Legion is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated '''Skill Point:''' Defeat all enemies within 7 turns '''Secret Requirements:'''
'''Unit Acquisition:'''

|'''Victory Condition:''' (1) Defeat all enemies; (2) All Angels are defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated, Shinji, Asuka, or Rei are defeated '''Skill Point:''' Defeat all enemies within 5 turns. '''Secret Requirements:'''
*Early Nu Gundam HWS
**If you did not receive it on Scenario 37, Amuro must have 60 or more kills by the end of the scenario.
*EVA-01 F-Type Equipment(optional)
**Shinji must defeat Armisael.
*Neue Ziel
**Kou must have 40 or more kills than Keith by the end of the scenario.
*Val Varo
**Keith must have 20 or more kills than Kou by the end of the scenario.
*Gerbera Tetra
**Kou and Keith's killcounts must be within 6 of one another by the end of the scenario.
*Quin Mantha
**The sum of Ple and Ple 2's killcounts must be a number ending in 5 at the end of the scenario.
*Haman's Qubeley
**The sum of Ple and Ple 2's killcounts must be a number ending in 0 at the end of the scenario.
*MP Qubeleys
**The sum of Ple and Ple 2's killcounts must be a number ending in 7 at the end of the scenario.
*Doven Wolf
**The sum of Beecha and Mondo's killcounts must be a number ending in 0 at the end of the scenario.
*Geymalk
**The sum of Beecha and Mondo's killcounts must be a number ending in 5 at the end of the scenario.
*Strike Rouge IWSP
**The sum of Cagalli, Julie, Mayura, and Asagi's killcounts must be 100 or more by the end of the scenario.
*Early Full Armor ZZ Gundam
**Judau, Mondo, Beecha, Elle, Roux, and Iino's combined killcounts must be greater than 115 by the end of this scenario.
'''Unit Acquisition:'''
*Neue Ziel OR Val Varo OR Gerbera Tetra
*Quin Mantha OR Haman's Qubeley OR Mass Production Qubeley (x2)
*Doven Wolf OR Geymalk
*Strike Rougue IWSP
*Heavy Weapon System for Nu Gundam
*Full Armor Parts for ZZ Gundam
*Evangelion Unit 2 gains the "A.T. Field" attack
*Evangelion Unit 0 Custom gains the "Lance of Longinus" attack

|'''Victory Condition:'''
*1st Part: All allies reach the designated point, aside Battle 7
*2nd Part: Any ally reaches the designated point
'''Defeat Condition:'''
*1st Part: Any ally is defeated
*2nd Part: Any ally is defeated
'''Skill Point:''' Defeat all enemies before moving a unit to the target area. '''Secret Requirements:'''
'''Unit Acquisition:'''
*The following all gain the "Large Anti-Ship Reaction Missile" attack
**VF-1S S Valkyrie (Focker), VF-1S S Valkyrie (Hikaru), VF-1A S Valkyrie (Kakizaki)
**VF-17S Nightmare (Gamlin), VF-17D Nightmare (Docker), VF-17D Nightmare (Physica)
**YF-19 (Isamu), YF-21 (Guld)

|'''Victory Condition:''' Zartan is defeated '''Defeat Condition:''' Any ally is defeated '''Skill Point:''' Destroy all other enemies before destroying Zaltan. '''Secret Requirements:'''
'''Unit Acquisition:'''
*Voltes V is unavailable during the intermission
*Daimos is unavailable during the intermission

|-
| class="fc-route1" |'''第４６話：さらば父よ、戦士達の旅立ち Scenario 46 - Farewell, Father! The Warriors Depart'''
| class="fc-route2" |'''第４６話：永遠を信じて Scenario 46 - Believe in Eternity'''
| class="fc-route3" |'''第４６話：野望の第４惑星 Scenario 46 - The Fourth Planet of Ambition'''
| class="fc-route4" |'''第４６話：崩れゆく邪悪の塔 Scenario 46 - The Collapsing Tower of Evil'''

|-
|'''Victory Condition:''' (1) Steel Jeeg persuades Flora; (2) Defeat Yamata no Orochi, Demonica, and the Dragon Ship; (3) '''Defeat Condition:''' (1) Flora is defeated, Ally battleship is defeated, Kouji, Tetsuya, or Steel Jeeg are defeated; (2) Yamata no Orochi reaches the designated point, Ally battleship is defeated, Kouji, Tetsuya or Steel Jeeg are defeated '''Skill Point:''' Destroy Ryuuma and the Grand Marshall of Hell within 8 turns. '''Secret Requirements:'''
*Minmei's Disc
**Move Boss's squad onto either 'Hut' tile on the beach, and you will pick up the item
'''Unit Acquisition:'''
*Mazinkaizer gains the "Kaizer Nova" attack and Flight (S Rank in Air)

|'''Victory Condition:''' (1)(2) Defeat all enemies; (3) The Dominion withdraws '''Defeat Condition:''' (1) Any ally is defeated; (2)(3) Ally battleship is defeated, Kira or Athrun are defeated '''Skill Point:''' Destroy the Dominion (retreats at (10000HP (E) / 15000HP (N)/20000HP (H)) '''Secret Requirements:''' '''Unit Acquisition:'''
*Eternal (Lacus, Andrew)
*BuCUE
*METEOR parts for Freedom Gundam
*METEOR parts for Justice Gundam
*LaGOWE

|'''Victory Condition:''' (1) Guide all enemies east past the designated line; (2) All allies reach the escape point '''Defeat Condition:''' (1) Any ally is defeated, Any enemy is defeated; (2) Any ally is defeated '''Skill Point:''' Clear the map by defeating all enemies within 8 turns of the victory condition change '''Secret Requirements:'''
*VF-19F Excaliburs
**Max must get 15 or more kills on this scenario.
'''Unit Acquisition:'''
*VF-22S Sturmvogel II (Max)
*FBz-99G Zaubergeran (Gamlin)
*VF-19 Kai Fire Valkyrie gains the song "TRY AGAIN"
**VF-19 Kai Fire Valkyrie, VF-11 MAXL Kai, and VF-17 Kai Nightmare gain the "TRY AGAIN" (MAP) and (ALL) combination attack

|'''Victory Condition:''' (1) None; (2) Warchimedes is defeated; (3) Janera is defeated '''Defeat Condition:''' (1) Any friendly unit is defeated, Voltes V or Daimos are defeated; (2)(3) Ally battleship is defeated, Hyouma, Ken'ichi, Kazuya, or Heinel are defeated '''Skill Point:''' Destroy all enemies and finish the stage within 10 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Combattler V, Voltes V, and Daimos gain the "Choudenji SeiKenZuki" combination attack

|-
| class="fc-route1" |'''第４７話：神になろうとした男 Scenario 47 - The Man Who Tried to Become a God'''
| class="fc-route2" |'''第４７話：ヒトの見た夢 Scenario 47 - The Dream People Saw'''
| class="fc-route3" |'''第４７話：大宇宙の意志 Scenario 47 - The Will of the Universe'''
| class="fc-route4" |'''第４７話：因果の海で Scenario 47 - In the Sea of Causality'''

|-
|'''Victory Condition:''' (1) Defeat all enemies; (2) Shapiro is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated '''Skill Point:''' Destroy Shapiro within 6 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Gaiking and Daiku Maryuu gain the "Giant Cutter Upside-down Slash" combination attack

|'''Victory Condition:''' (1)(2)(3) Defeat all enemies; '''Defeat Condition:''' (1) Ally battleship is defeated, Kira, Mwu, or Dearka are defeated; (2) Kira is defeated; (3) The Vesalius is defeated '''Skill Point:''' Orga, Clotho and Shani shot down before Fllay reaches the Dominion. '''Secret Requirements:''' '''Unit Acquisition:'''

|'''Victory Condition:''' (1)(2)(3) Defeat all enemies '''Defeat Condition:''' (1) Any ally is defeated; (2) Ally battleship is defeated, Bundle is defeated; (3) Ally battleship is defeated, Bundle, Gamlin, or Mylene are defeated '''Skill Point:''' Destroy all SMTC units within 5 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*VF-19S Excalibur (before deployment)
*VF-19F Excalibur (x2) (before deployment)
*Bundle's Ship (Bundle, Cutnal, Kernagul)

|'''Victory Condition:'''
*1st and 2nd Part: Defeat all enemies within (5 (E) / 4 (N) / 3 (H)) turns
*3rd and 4th Part: Defeat all enemies within (4 (E) / 3 (N) / 2 (H)) turns
*5th Part: Defeat all enemies within (8 (E) / 7 (N) / 6 (H)) turns
'''Defeat Condition:'''
*1st and 2nd Part: Ally battleship is defeated, Turn (6 (E) / 5 (N) / 4 (H)) is reached
*3rd and 4th Part: Ally battleship is defeated, Turn (5 (E) / 4 (N) / 3 (H)) is reached
*5th Part: Ally battleship is defeated, Turn (9 (E) / 8 (N) / 7 (H)) is reached
'''Skill Point:''' During the 5th Part: Shoot down the two Gataman Zans before the Gabro Zan '''Secret Requirements:''' '''Unit Acquisition:'''

|-
| colspan="2" class="fc-route1" |'''第４８話：失われた者たちへの鎮魂歌 Scenario 48 - Requiem for the Lost'''
| colspan="2" class="fc-route4" |'''第４８話：銀河に死す Scenario 48 - To Die in the Galaxy'''

|-
| colspan="2" |'''Victory Condition:''' (1) Deathgaia, Gildrome, and Helmut are defeated; (2) Mute Zalbados is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated '''Skill Point:''' Defeat all enemies within 6 turns after Muge Zalbados appears, then defeat Muge Zalbados '''Secret Requirements:'''
*Early Nu Gundam HWS
**If you did not receive it on Scenario 37 or 45, Amuro must have 60 or more kills by the end of the scenario.
'''Unit Acquisition:'''

| colspan="2" |'''Victory Condition:''' (1) Defeat all enemies; (2) Gollum or Zomd are defeated; (3) Defeat all enemies; (4) Gabro Zan is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated, Basara is defeated; (3)(4) Ally battleship is defeated, Ideon is defeated '''Skill Point:''' Destroy GaviGla (retreats at 8000HP (E) / 10000HP (N) / 12000HP (H)) '''Secret Requirements:'''
*Early Nu Gundam HWS
**If you did not receive it on Scenario 37 or 45, Amuro must have 60 or more kills by the end of the scenario.
*Gije & Ganga Rube
**The Ide Gauge must reach level 5 during this scenario.
'''Unit Acquisition:'''
*Ideon replaces Gije with Dek as a Subpilot
*Battle 7 gains the "Large Anti-Ship Reaction Missile" attack
*VF-19 Kai Fire Valkyrie (Basara) is unavailable during the intermission

|}
 

==Stages 49 - 58==
{| width="100%"
|-
| colspan="3" class="fc-std-sc" |'''第４９話：銀河に響く歌声 Scenario 49 - Songs Resounding Through the Galaxy'''

|-
| colspan="3" |'''Victory Condition:'''
*1st Part: Defeat all enemies, In 5 turns Battle 7 reaches the designated point
*2nd Part: (1) In 6 turns, Battle 7 reaches the designated point; (2)(3)(4) Gepelnitch is defeated
'''Defeat Condition:'''
*1st Part: Ally battleship is defeated, Battle 7 doesn't reach the designated point by turn 6
*2nd Part: (1) Ally battleship is defeated, Mylene or Ray are defeated, Battle 7 doesn't reach the designated point by turn 7; (2) Ally battleship is defeated, Ray is defeated; (3) Ally battleship is defeated, Basara, Mylene, or Ray are defeated; (4) Ally battleship is defeated, Basara, Mylene, Ray, or Sybil are defeated
'''Skill Point:''' GaviGla is defeated (in the 1st part) '''Secret Requirements:'''
*Gavil and FBz-99G Zaubergeran
**If Gamlin has over 50 kills, Gamlin must defeat GaviGla during the first half of the scenario. During the second half of the scenario, do not defeat Gavil.
'''Unit Acquisition:'''
*VF-22S Sturmvogel II (Max)
*VF-22S Sturmvogel II (Milia)
*Sybil (Sybil)
**VF-19 Kai Fire Valkyrie, VF-11 MAXL Kai, and VF-17 Kai Nightmare, and Sybil gain the "TRY AGAIN" combination attack
*FBz-99G Zaubergeran (Gavil)

|-
| colspan="3" class="fc-std-sc" |'''第５０話：二つの門と二つの星 Scenario 50 - Two Gates, Two Stars'''

|-
| colspan="3" |'''Victory Condition:''' (1) Hermodr Echad is defeated; (2) Zfield is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated '''Skill Point:''' Destroy the Hermodr Echad within 5 turns. '''Secret Requirements:'''
*Duel Gundam & Yzak
**Dearka's killcount must be 50 or more by the end of the scenario.
'''Unit Acquisition:'''

|-
| colspan="3" class="fc-std-sc" |'''第５１話：終わらない明日へ Scenario 51 - To an Unending Tomorrow'''

|-
| colspan="3" |'''Victory Condition:'''
*1st Part: (1) Destroy all nuclear missiles; (2) Dominion is defeated & Athrun reaches the designated point
*2nd Part: Destroy the Genesis reactor within 4 turns
'''Defeat Condition:'''
*1st Part: (1) Any missile reaches the end of the map, Ally battleship is defeated, Kira, Athrun or Cagalli are defeated; (2) Ally battleship is defeated, Kira, Athrun or Cagalli are defeated
*2nd Part: Kira is defeated, reach the 5th turn
'''Skill Point:''' Destroy the Providence Gundam (in the 2nd part) '''Secret Requirements:'''
*Duel Gundam & Yzak
**During the first half of the scenario, destroy all of the nukes, then have Dearka battle with Yzak
**Both must survive the first half of the scenario
'''Unit Acquisition:'''
*Cagalli unlocks the SEED pilot skill
*Lacus unlocks the SEED pilot skill
*Duel Gundam (Yzak)

|-
| colspan="3" class="fc-std-sc" |'''第５２話：世界の中心でアイを叫んだもの Scenario 52 - The One Who Cried "Love" at the Heart of the World'''

|-
| colspan="3" |'''Victory Condition:'''
*1st Part: (1)(2)(3) Defeat all enemies (4)(5) EVA Unit 1 is defeated
*2nd Part: EVA Unit 1 is defeated
'''Defeat Condition:'''
*1st Part: (1) Any ally is defeated; (2) Shinji is defeated; (3)(4) Ally battleship is defeated; (5) Ally battleship is defeated, Reach the 6th turn after the "Cross" grows from the Earth
*2nd Part: Shinji is defeated
'''Skill Point:''' Asuka survives for 2 full turns. '''Secret Requirements:'''
*Neue Ziel
**Kou must have 40 or more kills than Keith by the end of the scenario.
*Val Varo
**Keith must have 20 or more kills than Kou by the end of the scenario.
*Gerbera Tetra
**Kou and Keith's killcounts must be within 6 of one another by the end of the scenario.
*Quin Mantha
**The sum of Ple and Ple 2's killcounts must be a number ending in 5 at the end of the scenario.
*Haman's Qubeley
**The sum of Ple and Ple 2's killcounts must be a number ending in 0 at the end of the scenario.
*MP Qubeleys
**The sum of Ple and Ple 2's killcounts must be a number ending in 7 at the end of the scenario.
*Doven Wolf
**The sum of Beecha and Mondo's killcounts must be a number ending in 0 at the end of the scenario.
*Geymalk
**The sum of Beecha and Mondo's killcounts must be a number ending in 5 at the end of the scenario.
*EVA-01 F-Type Equipment
**Shinji must defeat Zeruel on the first part of this scenario.
**Shinji must defeat EVA-01 on the second part of this scenario.
**The sum of Shinji, Asuka, and Rei's killcounts must be 250 or more, or 150 or more if you met the requirement on scenario 45.
*Hi-Nu Gundam
**Amuro and Bright's combined killcounts must be greater than 120 by the end of this scenario.
*Sazabi
**Amuro and Kamille's killcount must be 50 or more each at the end of this scenario. You will receive it at the start of next scenario.
*Strike Rouge IWSP
**If you did not receive it on Scenario 45, the sum of Cagalli, Julie, Mayura, and Asagi's killcounts must be 100 or more by the end of the scenario.
*Destroid Monster
**If you did not receive it on Scenario 31, the sum of Fokker, Hikaru, and Kakizaki's killcounts must be 100 or more by the end of this scenario.
'''Unit Acquisition:'''
*Evangelion Unit 0 (Kaowru)
*Evangelion Unit 0 loses the "Lance of Longinus" attack

|-
| colspan="3" class="fc-prologue" |'''Beyond this point, losing Ideon results in a Game Over'''
|-
| colspan="3" class="fc-std-sc" |'''第５３話：出航！銀河殴り込み艦隊！ Scenario 53 - The Galactic Assault Fleet Takes Sail!'''

|-
| colspan="3" |'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' 230 enemy units shot down by turn 7. '''Secret Requirements:''' '''Unit Acquisition:'''
*All secret units and parts are given after the stage begins <ul><li>Neue Ziel OR Val Varo OR Gerbera Tetra</li><li>Quin Mantha OR Haman's Qubeley OR Mass Production Qubeley (x2)</li><li>Doven Wolf OR Geymalk</li><li>Strike Rougue IWSP</li><li>Hi-Nu Gundam</li><li>Sazabi</li><li>Destroid Monster</li><li>F-Type Equipment for Evangelion Unit 1</li><li>Atomic Bazooka parts for GP-02</li><li>Heavy Weapon System for Nu Gundam</li></ul>
* Full Armor modular parts for Gundam ZZ
** If the secret requirements were not met earlier
*MP Nu Gundam
**Fin Funnel parts for MP Nu Gundam
*Gunbuster adds Kazumi as a Subpilot
**Gunbuster gains the "Super Inazuma Kick" attack
*Ra Cailum gains the "Nuclear Missile" MAP and ALL attacks

|-
| colspan="3" class="fc-std-sc" |'''第５４話：神に守られし星 Scenario 54 - The Planet Guarded by the Gods'''

|-
| colspan="3" |'''Victory Condition:'''
*1st Part: (1) Defeat all enemies; (2) The SRX Team rescues [https://akurasu.net/wiki/Super_Robot_Wars/Alpha_3/Info_Dump#Finding_Aya_on_Scenario_54 Aya]; (3) Jumora is defeated
*2nd Part: Bemidoban is defeated
'''Defeat Condition:'''
*1st Part: (1)(2) Ally battleship is defeated, Ryusei or Viletta are defeated; (3) Ally battleship is defeated, Ryusei, Viletta, Baran, or Lyria are defeated
*2nd Part: Sanger is defeated
**2nd Part (Touma Route): Touma is defeated
'''Skill Point:''' Clear the map within 10 turns, with both Hermoz defeated '''Secret Requirements:''' '''Unit Acquisition:'''
*Banpreios adds Aya as a Subpilot
**Branpreios gains the "Tenjou Tenge Nendou Musou-ken" attack
**Branpreios and R-GUN Powered gain the "Tenjou Tenge Ichigeki Hissatsu-ho" combination attack
*Shumel (Lyria)
*Bemidoban (Baran)

|-
| colspan="3" class="fc-std-sc" |'''第５５話：まつろわぬ神 Scenario 55 - The God Who Resists Order'''

|-
| colspan="3" |'''Victory Condition:'''
*1st Part: (1) Defeat all enemies; (2) Defeat Gebel GanEden
*2nd Part: (1) Defeat all enemies; (2) Defeat Gebel GanEden
'''Defeat Condition:'''
*1st Part: (1)(2) Ally battleship is defeated
*2nd Part: (1)(2) Ally battleship is defeated
'''Skill Point:''' Within 6 turns, defeat both Zfiruds '''Secret Requirements:''' '''Unit Acquisition:'''

|-
| colspan="3" class="fc-std-sc" |'''第５６話：終わりなき総力戦 Scenario 56 - Unending Total War'''

|-
| colspan="3" |'''Victory Condition:'''
*1st Part: Drowa Zan is defeated within 5 turns
*2nd Part: (1) Soloship move next to the Bairal Jinn; (2) Any unit reaches the designated point
'''Defeat Condition:'''
*1st Part: Ally battleship is defeated, 6th turn is reached
*2nd Part: (1)(2) Ally battleship is defeated
'''Skill Point:''' Clear the map within 7 turns. '''Secret Requirements:'''
*Gije & Ganga Rube
**You must pick the Fight The Buff Clan option at the end of the scenario.
*Bad Ending Route
**On New Game+, choose to fight (first option)
'''Unit Acquisition:'''

|- class="fc-route-h"
| width="40%" |'''Fight The Buff Clan''' Ideon, Getter Robo Combattler V, Voltes V, Daimos Daitarn 3 Gundam (0083, Zeta, ZZ, CCA, Wing, SEED)
| width="40%" |'''Fight The STMC''' Mazinger (Z, Great), Steel Jeeg, Raiden Goshogun, Dancouga, Gaiking Macross (DYRL, Plus, 7) Gunbuster, Evangelion, GaoGaiGar Virtual On
| width="20%" |'''Bad Ending '''

|-
| class="fc-route1" |'''第５７話：憎しみの環の中で Scenario 57 - In a Circle of Hatred'''
| class="fc-route3" |'''第５７話：終わりの始まり Scenario 57 - The Beginning of the End'''
| class="fc-prologue" |'''イデ発動ルート最終話：銀河に君と''' '''Ide Activation Final Scenario - With You In The Galaxy'''

|-
|'''Victory Condition:'''
*1st Part: (1) Defeat all enemies; (2) Soloship reaches the designated point
*2nd Part: Defeat all enemies within (11 (E) / 9 (N) / 7 (H)) turns
'''Defeat Condition:'''
*1st Part: (1)(2) All allies are defeated
*2nd Part: Turn (12 (E) / 10 (N) / 8 (H)) is reached, Ally battleship is defeated
'''Skill Point:''' Defeat all enemies within (10 (E) / 8 (N) / 6 (H)) turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Ganga Rube (Gije)

|'''Victory Condition:''' (1)(2) Defeat all enemies '''Defeat Condition:''' (1) Eltrium is defeated; (2) Ally battleship is defeated '''Skill Point:''' Defeat all enemies within 7 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Eltrium (Tashiro, Deputy Chief)

| rowspan="4" |'''Victory Condition:''' Bairal Jinn is defeated '''Defeat Condition:''' Ally battleship is defeated '''Secret Requirements:''' '''Unit Acquisition:'''

|-
| class="fc-route1" |'''第５８話：発動 Scenario 58 - Activation'''
| class="fc-route3" |'''第５８話：死闘、未来を懸けて Scenario 58 - The Mortal Struggle for the Future'''

|-
|'''Victory Condition:'''
*1st Part: Bairal Jinn is defeated
*2nd Part: Bairal Jinn is defeated
'''Defeat Condition:'''
*1st Part: Ally battleship is defeated
*2nd Part: Ally battleship is defeated
'''Skill Point:''' Destroy the Bairal Jinn within six turns. '''Secret Requirements:''' '''Unit Acquisition:'''

|'''Victory Condition:''' (1)(2) Defeat all enemies '''Defeat Condition:''' (1) Ally battleship is defeated; Drowa Zan is defeated, Ally battleship is defeated(2) '''Skill Point:''' All Buff Clan units survive the stage. '''Secret Requirements:''' '''Unit Acquisition:'''

|}
 

==Stages 59 - END==
{| width="100%"
|-
| colspan="2" class="fc-std-sc" |'''第５９話：果てしなき流れの果てに Scenario 59 - At the End of the Unending Flow'''

|-
| colspan="2" |'''Victory Condition:'''
*1st Part: Reach the 11th turn
*2nd Part: Defeat all enemies, 6th turn is reached
'''Defeat Condition:'''
*1st Part: Ally battleship is defeated, Any enemy enters the designated area
*2nd Part: Any enemy enters the designated area, Ally battleship is defeated, Noriko or Jung are defeated
'''Skill Point:''' Defeat all enemies within 5 turns. '''Secret Requirements:''' '''Unit Acquisition:'''

|- class="fc-route-h"
| width="50%" |'''Normal Ending - 56 Skill Points or less, OR turn count 421 or more'''
| width="50%" |'''Good Ending - 57 Skill Points or more AND turn count 420 or less'''

|-
| class="fc-route1" |'''最終話: 終焉の銀河 Final Scenario - A Galaxy of Death'''
| class="fc-route3" |'''最終話: 今遥か遠い彼方… Final Scenario - Now, The Faraway Yonder'''

|-
|'''Victory Condition:''' (1) ??? is destroyed; (2) Kaiser Ephres is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated '''Secret Requirements:''' '''Unit Acquisition:'''

|'''Victory Condition:''' (1) ??? is destroyed; (2)(3) Kaiser Ephres is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated; (3) Irui is defeated '''Secret Requirements:''' '''Unit Acquisition:'''
*Nashim Gan Eden (Irui)

|}

Super Robot Wars/Alpha 3/Flow Chart

2023-06-19T01:11:34Z

KomodoWork: /* Stages 49 - 58 */ Missing skill unlocked

Units and Pilots in Black join your team. 
Units and Pilots in Orange are available for that stage, then leave. 
Units and Pilots in Blue have special requirements. Check the [[../Secrets|Secrets]] page for more details. 
Units and Pilots in Red previously joined, but from this point, are rendered unusable. Those lost permanently are marked so, while others rejoin later on. 
Information in Green are upgrades for units already in your party.

==Stages 01 - 18==
{| width="100%"
|- class="fc-route-h"
| width="25%" |'''Touma Route'''
| width="25%" |'''Kusuha Route'''
| width="25%" |'''Cobray Route'''
| width="25%" |'''Selena Route'''

|-
| class="fc-route1" |'''第１話：闘志、炎に燃ゆる Scenario 1 - Within the Flames, Fighting Spirit Rises'''
| class="fc-route2" |'''第１話：出撃！鋼の龍虎 Scenario 1 - Launch! Dragon and Tiger of Steel'''
| class="fc-route3" |'''第１話：虚空からの転生 Scenario 1 - Reincarnated from the Void'''
| class="fc-route4" |'''第１話：シークレット・ミッション Scenario 1 - Secret Mission'''

|-
|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Any allied unit is defeated '''Skill Point:''' Defeat all enemies in 3 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Raioh (Touma)
*GaoGaiGar (Guy)
*Goldymarg (Goldymarg)
*HyoRyu (HyoRyu)
*EnRyu (EnRyu)

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Any allied unit is defeated '''Skill Point:''' Defeat all enemies in 2 turns '''Secret Requirements:'''
*Bullet
**You must be playing as Kusuha to recruit Bullet.
'''Unit Acquisition:'''
*Gouryu Kai (Kusuha)
*Raikou Kai (Bullet)
*Mazinkaiser (Kouji)
*Diana A (Sayaka)
*Shin Getter (Ryoma, Hayato, Benkei)
*Lady Command (Michiru)

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' (1) Werkbau is defeated; (2) Werkbau is defeated, ally battleship is defeated '''Skill Point:''' Defeat all enemies in 5 turns after enemy reinforcements show up '''Secret Requirements:'''
*Arado and Seolla
**You must be playing as Cobray to recruit Arado and Seolla.
'''Unit Acquisition:'''
*Werkbau (Cobray)
*Nu Gundam (Amuro)
*Ra Cailum (Bright, Torres)
*MP Nu Gundam (Kayra)
*Jegan (Katz)
*Incom & Funnel parts for MP Nu Gundam

|'''Victory Condition:''' (1) All enemies except Salamis Kai shot down; (2) R-Gun Powered shot down '''Defeat Condition:''' (1) Selena shot down, Salamis Kai shot down; (2) Selena shot down '''Skill Point:''' Defeat all enemies except the Salamis Kai in 4 turns '''Secret Requirements:'''
*Ibis and Slay
**You must be playing as Selena to recruit Ibis and Slay.
'''Unit Acquisition:'''
*AS Soleares (Selena, Elma)
*Albion (Synapse, Paserov)
*GP03 Dendrobium (Kou)
*GM Cannon II (Keith)
*GM Custom (Burning)
*GM Custom (Bate)
*GM Custom (Monsha)
*GM Cannon II (Adel)
*Zeta Gundam (Kamille)
*Re-GZ BWS (Four)
*Methuss (Fa)
*Super Gundam (Emma)
*Armed Fortress Orchis parts for Gundam Stamen
*G Defensor parts for Gundam Mk-II

|-
| class="fc-route1" |'''第２話: さらばGGG、さらば勇者 Scenario 2 - Farewell, GGG! Farewell, Braves!'''
| class="fc-route2" |'''第２話: 新たなる侵略者！立ち上がれV Scenario 2 - New Invaders! Rise Up, V!'''
| class="fc-route3" |'''第２話: 血の狼煙 Scenario 2 - Beacon Fire of Blood'''
| class="fc-route4" |'''第２話: フラッシュ・デイ Scenario 2 - Flash Day'''

|-
|'''Victory Condition:''' Defeat all enemies; Defeat ZX-01 '''Defeat Condition:''' Any allied unit is defeated '''Skill Point:''' Defeat the 4 Zonders in 2 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*GaoGaiGar (Guy)
*J-Der (J, Tomoro)
*Great Mazinger (Tetsuya)
*Venus A (Jun)
*Boss Borot (Boss, Nuke, Mucha)
*Kotetsu Jeeg (Jeeg)
*Big Shooter (Miwa)

|'''Victory Condition:''' (1) Defeat all enemies, (2) Defeat Dangel '''Defeat Condition:''' (1) Hyouma defeated (2) Any Allied Unit is defeated '''Skill Point:''' Defeat all enemies in 3 turns, do not lose any Federation Army squads '''Secret Requirements:''' '''Unit Acquisition:'''
*Combattler V (Hyoma, Juzo, Daisaku, Chizuru, Kosuke)
*Jegan (Federation Soldier) x 3

|'''Victory Condition:''' (1) Defeat the Magellan Kai-class Battleship (2) Defeat the Magellan Kai-class Battleship and Nuclear Missiles '''Defeat Condition:''' (1) Any ally unit is defeated (2) Nuclear Missiles reach the marked area on the map '''Skill Point:''' Defeat the enemy missiles and battleship in 7 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Clop-class (Federation Captain)
*Wildfalken (Seolla)
*MP Nu Gundam (Cobray)
*ZZ Gundam (Judau)
*Re-GZ BWS (Roux)
*Albion (Synapse, Paserov)
*GP03 Dendrobium (Kou)
*GM Cannon II (Keith)
*GM Custom (Burning)
*GM Custom (Bate)
*GM Custom (Monsha)
*GM Cannon II (Adel)
*Zeta Gundam (Kamille)
*Re-GZ BWS (Four)
*Methuss (Fa)
*Super Gundam (Emma)
*Armed Fortress Orchis parts for Gundam Stamen
*G Defensor Parts for Gundam Mk-II

|'''Victory Condition:''' Defeat any enemy battleship '''Defeat Condition:''' (1) Allied battleship is defeated; (2) Allied battleship is defeated, Selena is defeated '''Skill Point:''' Defeat the enemy battleship in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*ZZ Gundam (Judau)
*Re-GZ BWS (Roux)
*Nu Gundam (Amuro)
*Ra Cailum (Bright)
*Jegan (Katz)
*MP Nu Gundam (Keyra)
*AS Soleares (Selena, Elma)
*Incom & Funnel parts for MP Nu Gundam

|-
| colspan="4" class="fc-std-sc" |'''第３話: 逆襲！機界31原種 Scenario 3 - Counterattack! The 31 Machine Primevals!'''

|-
| colspan="4" |'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' (1) Ally battleship is defeated, One of the Machine Primevals reaches the edge of the map; (2) Ally battleship is defeated, One of the Machine Primevals reaches the edge of the map, J is defeated '''Skill Point:''' Defeat all enemies in 6 turns '''Secret Requirements:''' '''Unit Acquisition (Touma & Kusuha):'''
*J-Ark (J, Tomoro)
*Nu Gundam (Amuro)
*Ra Cailum (Bright, Torres)
*Jegan (Katz)
*MP Nu Gundam (Keyra)
*Albion (Synapse, Paserov)
*GP03 Dendrobium (Kou)
*GM Cannon II (Keith)
*GM Custom (Burning)
*GM Custom (Bate)
*GM Custom (Monsha)
*GM Cannon II (Adel)
*Zeta Gundam (Kamille)
*Re-GZ BWS (Four)
*Methuss (Fa)
*Super Gundam (Emma)
*Incom & Funnel parts for MP Nu Gundam
*Armed Fortress Orchis parts for Gundam Stamen
*G Defensor Parts for Gundam Mk-II
'''Unit Acquisition (Cobray & Selena):'''
*J-Ark (J, Tomoro)
*Mazinkaiser (Kouji)
*Diana A (Sayaka)
*Great Mazinger (Tetsuya)
*Venus A (Jun)
*Combattler V (Hyoma, Juzo, Daisaku, Chizuru, Kosuke)
*Koutetsu Jeeg (Jeeg)
*Big Shooter (Miwa)
*Shin Getter (Ryoma, Hayato, Benkei)
*Lady Command (Michiru)

|-
| colspan="4" class="fc-std-sc" |'''第４話：地獄門、開く Scenario 4 - The Gates of Hell Open'''

|-
| colspan="4" |'''Victory Condition:'''
*1st Part: Allied Battleship reaches the escape point in 5 turns, All Enemies are defeated in 5 turns
*2nd Part: Defeat all enemies
'''Defeat Condition:'''
*1st Part: Allied Battleship is defeated, Turn 6 starts
*2nd Part: SRX is defeated
'''Skill Point:''' Defeat all enemies in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*SRX (Damaged) (Ryuusei, Rai, Aya)

|-
| colspan="4" class="fc-std-sc" |'''第５話: 地球圏絶対防御線 Scenario 5 - The Earth Sphere’s Absolute Defense Line'''

|-
| colspan="4" |'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' (1) Ally battleship is defeated (2) Any allied unit is defeated '''Skill Point:''' Clear the stage in 6 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Mobieus Zero (Mwu)
*All Char's Counter Attack, Stardust Memory, and Zeta Gundam units are lost <ul><li>Nu Gundam(Amuro)</li><li>Ra Cailum (Bright, Torres)</li><li>MP Nu Gundam (Keyra)</li><li>Albion (Synapse, Paserov)</li><li>GP03 Dendrobium (Kou)</li><li>GM Cannon II (Keith)</li><li>GM Custom (Burning)</li><li>GM Custom (Bate)</li><li>GM Custom (Monsha)</li><li>GM Cannon II (Adel)</li><li>Zeta Gundam (Kamille)</li><li>Re-GZ BWS (Four)</li><li>Methuss (Fa)</li><li>Super Gundam (Emma)</li><li>Jegan (Katz)</li></ul>

|- class="fc-route-h"
|'''Touma Route''' Great Mazinger, Venus A, Boss Borot Steel Jeeg, Big Shooter
|'''Kusuha Route''' Getter Robo G, Lady Command Mazinger Z, Diana A Combattler V
|'''Cobray Route''' ZZ Gundam, ReGZ (BWS) Mobieus Zero
|'''Selena Route'''
|-
| class="fc-route1" |'''第６話：平和、遥か遠く Scenario 6 - A Faraway Peace'''
| class="fc-route2" |'''第６話：北米戦線、異常アリ Scenario 6 - Abnormalities on the North American Front'''
| class="fc-route3" |'''第６話：GUNDAM出撃 Scenario 6 - Gundam, Sortie'''
| class="fc-route4" |'''第６話：ザ・ビギニング Scenario 6 - The Beginning'''

|-
|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Any ally is defeated '''Skill Point:''' Defeat all enemies in 5 turns; Defeat the Yamata no Orochi last '''Secret Requirements:''' '''Unit Acquisition:'''
*GaiGar (Gai)
*Mic Sounders XIII (Mic Sounders XIII)

|'''Victory Condition:''' (1) Ally reaches the designated area; (2) Defeat all enemies '''Defeat Condition:''' Any ally defeated '''Skill Point:''' Reach target location without engaging in combat '''Secret Requirements:''' '''Unit Acquisition:'''
*Mazinkaiser → Mazinger Z (Kouji)
*Shin Getter Robo → Getter Robo G (Ryoma, Hayato, Benkei) 
*Dancouga (Shinobu, Sara, Masato, Ryo)

|'''Victory Condition:'''
*1st Part: Sigu is defeated, Vesalius is defeated
*2nd Part: Defeat all enemies 
'''Defeat Condition:'''
*1st Part: Any ally is defeated
*2nd Part: Any ally is defeated 
'''Skill Point:''' Accomplish either objective in 4 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Clop Class Battleship (Federation Officer)
*Wing Gundam Zero Kai (Heero)
*Gundam Deathscythe Hell Kai (Duo)
*Gundam Sandrock Kai (Quatre)
*Taurus (Hilde)
*Strike Gundam (Kira)

|'''Victory Condition:''' (1) AS Soleares reaches the designated point in 4 turns; (2) Defeat all enemies '''Defeat Condition:''' (1) Begin turn 5 without meeting victory conditions, Any ally is defeated; (2) Any ally is defeated '''Skill Point:''' Defeat all enemies in 4 turns and get the AS Soleares to the target square '''Secret Requirements:''' '''Unit Acquisition:'''
*CGUE (Rau)
*GINN (ZAFT Soldier) x 2
*Vesarius (Ades)

|-
| class="fc-route1" |'''第７話：燃えろ宙！妖花フローラの挑戦 Scenario 7 - Space Burns! The Enchanting Flora’s Challenge!'''
| class="fc-route2" |'''第７話：怒りの獣、野生の咆哮 Scenario 7 - The Wild Roar of the Raging Beast'''
| class="fc-route3" |'''第７話：崩壊の大地 Scenario 7 - Collapsing Land'''
| class="fc-route4" |'''第７話：ワンズ・ジャスティス Scenario 7 - One’s Own Justice'''

|-
|'''Victory Condition:''' 
*1st Part: Defeat all enemies
*2nd Part: Defeat all enemies
'''Defeat Condition:''' 
*1st Part: Any ally defeated
*2nd Part: Any ally defeated
'''Skill Point:''' Defeat all enemies in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*AnRyu (AnRyu)
*KouRyu (KouRyu)

|'''Victory Condition:''' (1) Defeat all enemies; (2) Defeat Dangel '''Defeat Condition:''' Any ally is defeated '''Skill Point:''' Defeat all Zubanzas, Boazan Flying Saucers, and Red Baloms within 4 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Black Wing (Alan)

|'''Victory Condition:''' (1) Defeat all enemies; (2) Archangel reaches the designated point, Defeat all enemies '''Defeat Condition:''' (1) Mwu is defeated; (2) Ally battleship is defeated, Kira or Mwu are defeated '''Skill Point:''' Defeat all enemies in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Strike Gundam (Kira)
*Archangel (Murrue, Natarle)
*Aile, Sword and Launcher Striker packs for Strike Gundam

|'''Victory Condition:''' Any ally reaches the designated point '''Defeat Condition:''' Any ally is defeated '''Skill Point:''' Defeat all enemies in 5 turns and get an allied unit to the target square '''Secret Requirements:''' '''Unit Acquisition:'''
*Altron Gundam (Wufei)
*Gundam Heavyarms Kai (Trowa)
*CGuE (Rau)
*Vesarius (Ades)
*Aegis Gundam (Athrun)
*Blitz Gundam (Nicol)
*Buster Gundam (Dearka)
*Duel Gundam (Yzak)

|-
| class="fc-route1" |'''第８話：立ち上がれ！勇気ある者達 Scenario 8 - Stand Up, People of Courage!'''
| class="fc-route2" |'''第８話：輝け！不死身の勇者 Scenario 8 - Shine, Undying Hero!'''
| class="fc-route3" |'''第８話：誘う声 Scenario 8 - An Inviting Voice'''
| class="fc-route4" |'''第８話：インビジブル・イントルーダー Scenario 8 - Invisible Intruder'''

|-
|'''Victory Condition:''' (1) Defeat all enemies; (2) ZX-02 is defeated '''Defeat Condition:''' (1) Any ally is defeated; (2) Gai is defeated, J is defeated '''Skill Point:''' Defeat all enemies in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*GaiGar → GaoGaiGar
*Mic Sounders XIII gains "Disc P", "Disc M", and "Disc X" attacks
*Goldymarg (Goldymarg)
*HyoRyu (HyoRyu)
*EnRyu (EnRyu)
*Big Volfogg (Big Volfogg)

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' (1) Any ally is defeated; (2) Akira is defeated '''Skill Point:''' Defeat the Bramble (retreats at 4000HP (E) / 6000HP (N) / 8000HP (H)) '''Secret Requirements:''' '''Unit Acquisition:'''
*Raideen (Akira)
*Bluegar (Jinguji, Mari)

|'''Victory Condition:'''
*1st Part: (1) Vesalius is defeated; (2) Defeat all enemies
*2nd Part: (1) Defeat all enemies; (2) Defeat all enemies except Valk Baal 
'''Defeat Condition:'''
*1st Part: Ally battleship is defeated, Seolla or Cobray are defeated
*2nd Part: Any ally is defeated 
'''Skill Point:''' Defeat Aegis, Duel, Buster, and Blitz Gundams in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Zeta Gundam (Kamille)
*Re-GZ BWS (Four)
*Methuss (Fa)
*Super Gundam (Emma)
*Ra Cailum (Bright, Torres)
*MP Nu Gundam (Cobray)
*Werkbau (Cobray)
*G Defensor parts for Gundam Mk-II

|'''Victory Condition:''' Reach turn 6 '''Defeat Condition:''' Any ally is defeated '''Skill Point:''' Defeat all the Jegans '''Secret Requirements:''' '''Unit Acquisition:'''
*CGuE (Rau)
*Vesarius (Ades)
*Aegis Gundam (Athrun)
*Blitz Gundam (Nicol)
*Buster Gundam (Dearka)
*Duel Gundam (Yzak)

|-
| class="fc-route1" |'''第９話：内なる修羅 Scenario 9 - Demons of War Within'''
| class="fc-route2" |'''第９話：再会！ニューヨーク解放戦 Scenario 9 - Reunion! The Battle to Retake New York'''
| class="fc-route3" |'''第９話：正義の在処 Scenario 9 - Where Justice Can Be Found'''
| class="fc-route4" |'''第９話：アベンジャー Scenario 9 - Avenger'''

|-
|'''Victory Condition:''' (1) Defeat all enemies; (2) Defeat Raioh '''Defeat Condition:''' (1) Any ally defeated; (2) Sanger is defeated '''Skill Point:''' Defeat the Bramble in 4 turns (retreats at 4000HP (E) / 6000HP (N) / 8000HP (H)) '''Secret Requirements:''' '''Unit Acquisition:'''
*Dygenguar (Sanger)
*Huckebein Mk-III Trombe (Ratsel)
*Raideen (Akira)
*Bluegar (Jingunji, Mari)
*Mazinger Z (Kouji)
**Mazinger Z (Kouji) and Great Mazinger (Tetsuya) gain the "Double Mazinger Blade" and "Double Burning Fire" combination attacks
*Diana A (Sayaka)
*Getter Robo G (Ryoma, Hayato, Benkei)
*Lady Command (Michiru)
*Combattler V (Hyoma, Juzo, Daisaku, Chizuru, Kosuke)

|'''Victory Condition:''' (1) Defeat all enemies; (2) Dancouga reaches the designated point; (3) Defeated Deathgaia, Dangel, and Warchamedes '''Defeat Condition:''' (1) Shinobu, Kusuha, or Bullet are defeated; (2) Shinobu, Kusuha, Bullet, or Alan are defeated; (3) Alan is defeated '''Skill Point:''' Clear the map in 8 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Black Wing (Alan)
*Dygenguar (Sanger)
*Huckebein Mk-III Trombe (Ratsel)

|'''Victory Condition:''' (1) Vesalius is defeated; Reduce the Muge Battleship under 2000 HP before it reaches the edge of the map '''Defeat Condition:''' (1) Ally battleship is defeated; (2) Muge Battleship reaches the western edge of the map '''Skill Point:''' Defeat all enemies before reducing the Muge Mothership's HP below 2000 or defeating it '''Secret Requirements:''' '''Unit Acquisition:'''

|'''Victory Condition:''' (1) Reduce the Archangel's HP to 50% or less, Defeat all enemies besides the Archangel; (2) Reduce the Varuch Ishar to 4000 HP or less. '''Defeat Condition:''' Any ally is defeated '''Skill Point:''' Defeat the Varuch Ishar (flees at 4000 HP) '''Secret Requirements:''' '''Unit Acquisition:'''
*CGuE (Rau)
*Vesarius (Ades)
*Aegis Gundam (Athrun)
*Blitz Gundam (Nicol)
*Buster Gundam (Dearka)
*Duel Gundam (Yzak)

|-
| class="fc-route1" |'''第１０話：激震の地底帝国 Scenario 10 - Tremors in the Underground Empire'''
| class="fc-route2" |'''第１０話：龍を喰らうもの Scenario 10 - That Which Devours the Dragon'''
| class="fc-route3" |'''第１０話：消えていく光 Scenario 10 - The Fading Light'''
| class="fc-route4" |'''第１０話：グッバイ・フレンズ Scenario 10 - Goodbye, Friends'''

|-
|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' All allies defeated, Science Fortress Lab destroyed '''Skill Point:''' Clear the map without the Science Fortress Lab taking damage '''Secret Requirements:''' '''Unit Acquisition:'''
*Raioh loses the "System LIOH" ability
*Raioh gains the "Rising Meteor" attack
*Dygenguar (Sanger)
*Huckebein Mk-III Trombe (Ratsel)

|'''Victory Condition:''' (1) Sanger is defeated; (2)(3) Defeat all enemies; (4)(5) ZX-02 is defeated '''Defeat Condition:''' (1) Bullet is defeated; (2) Sanger or Rastel are defeated; (3) Any ally is defeated; (4) Guy, Sanger, or Rastel are defeated; (5) Guy, J, Sanger, or Rastel are defeated '''Skill Point:''' Reduce Shin RyuOuKi to below 10000 HP within 3 turns of its arrival '''Secret Requirements:''' '''Unit Acquisition:'''
*Dygenguar (Sanger)
*Huckebein Mk-III Trombe (Ratsel)
*GaiGar (Guy)
*GaoGaiGar (Guy)
*Mic Sounders XIII (Mic Sounders XIII)
*Goldymarg (Goldymarg)
*HyoRyu (HyoRyu)
*EnRyu (Enryu)
*Volfogg (Volfogg)
*Great Mazinger (Tetsuya)
*Venus A (Jun)
*Boss Borot (Boss, Mucha, Nuke)
*Kotetsu Jeeg (Jeeg)
*Big Shooter (Miwa)
*Stealth Gao II parts for GaoGaiGar
*Gunbot parts for Volfogg

|'''Victory Condition:''' (1) Reduce the Blitz Gundam to under 7000HP; (2) The Gamow is defeated; (3) The Gamow is defeated and Imperial Guard are defeated '''Defeat Condition:''' (1)(2) Any ally is defeated; (3) Ally battleship is defeated '''Skill Point:''' Defeat the Gamow (retreats at 4000HP (E) / 6000HP (N) / 8000HP (H)) '''Secret Requirements:''' '''Unit Acquisition:'''
*Qubeley Mk-II (Puru)
*Qubeley Mk-II (Puru Two)
*Hyaku Shiki (Beecha)
*Gundam Mk-II (Elle)
*Jegan (Mondo)
*Megarider (Iino)
*YF-19 (Isamu)
*YF-21 (Guld)

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' (1) Any ally is defeated; (2) Ally battleship is defeated; (3) Ally battleship is defeated, Isamu or Guld are defeated '''Skill Point:''' Clear the map in 6 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Zeta Gundam (Kamille)
*Methuss (Fa)
*ReGZ (Four)
*Super Gundam (Emma)
*Mobius Zero (Mwu)
*Wing Gundam Zero Kai (Heero)
*Gundam Sandrock Kai (Quatre)
*Gundam Deathscythe Hell Kai (Duo)
*Taurus (Hilde)
*ZZ Gundam (Judau)
*ReGZ BWS (Roux)
*Qubeley Mk-II (Puru)
*Qubeley Mk-II (Puru Two)
*Hyaku Shiki (Beecha)
*Gundam Mk-II (Elle)
*Jegan (Mondo)
*Megarider (Iino)
*YF-19 (Isamu)
*YF-21 (Guld)

|-
| class="fc-route1" |'''第１１話：戦場の邂合、そして決別 Scenario 11 - An Battlefield Encounter, and Then a Departure'''
| class="fc-route2" |'''第１１話：新たなる人類 Scenario 11 - A New Mankind'''
| class="fc-route3" |'''第１１話：君と戦場で Scenario 11 - On the Battlefield with You'''
| class="fc-route4" |'''第１１話：パワー・ジャンクション Scenario 11 - Power Junction'''

|-
|'''Victory Condition:''' (1) Defeat all enemies; (2) Defeat Vesalius '''Defeat Condition:''' Ally battleship is defeated, Kira or Mwu are defeated '''Skill Point:''' Defeat all enemies in 7 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Archangel (Murrue)
*Strike Gundam (Kira)
*Moebius Zero (Mwu)
*Stealth Gao II Parts for GaoGaiGar
*Aile, Sword, and Launcher Striker packs for Strike Gundam

|'''Victory Condition:''' (1) Defeat all enemies; (2) Vesalius is defeated '''Defeat Condition:''' (1) Ally battleship is defeated, Kira or Mwu are defeated; (2) Ally battleship is defeated '''Skill Point:''' Defeat all enemies in 7 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Strike Gundam (Kira)
*Mobeius Zero (Mwu)
*Archangel (Murrue, Natarle)
*YF-19 (Isamu)
*YF-21 (Guld)
*Aile, Sword, and Launcher Striker packs for Strike Gundam

|'''Victory Condition:''' (1) Defeat all enemies (2) ZX-02 is defeated '''Defeat Condition:''' (1) Kira is defeated; (2) Any ally is defeated '''Skill Point:''' Defeat all enemies in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Wildburger (Arado)
*Great Mazinger (Tetsuya)
*Venus A (Jun)
*Boss Borot (Boss)
*Dancouga (Shinobu, Sarah, Masato, Ryo)
*Raideen (Akira)
*Bluegar (Jingunji)
*Mazinger Z (Kouji)
*Diana A (Sayaka)
*Getter Robo G (Ryoma, Hayato, Benkei)
*Lady Command (Michiru)
*Star Gaogaigar (Gai)
*Goldymarg (Goldymarg)
*Mic Sounders the 13th (Mic)
*Hyoryu (Hyoryu)
*Enryu (Enryu
*Big Volfogg (Volfogg)

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Defeat all enemies in 7 turns '''Secret Requirements:''' '''Unit Acquisition:'''

|-
| class="fc-route1" |'''第１２話：守るべきモノ Scenario 12 - What You Must Protect'''
| class="fc-route2" |'''第１２話：別れの宇宙 Scenario 12 - Farewells in Space'''
| class="fc-route3" |'''第１２話：ディーンの火 Scenario 12 - The Flames of Deen'''
| class="fc-route4" |'''第１２話：コンクルージョン Scenario 12 - Conclusion'''

|-
|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' All enemies defeated '''Skill Point:''' Defeat all enemies in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Gundam Wing Zero (Heero)
*Gundam Deathscythe Hell Kai (Duo)
*Gundam Sandrock Kai (Quatre)
*Gundam Heavyarms Kai (Trowa)
*Altron Gundam (Wufei)
*Taurus (Hilde)
*Zeta Gundam (Kamille)
*Re-GZ BWS (Four)
*Methuss (Fa)
*Gundam Mk-II (Emma)
*ZZ Gundam (Judau)
*Qubeley Mk-II (Puru)
*Qubeley Mk-II (Puru Two)
*Hyaku Shiki (Beecha)
*Gundam Mk-II (Elle)
*Jegan (Mondo)
*Megarider (Iino)
*YF-19 (Isamu) (After stage)
*YF-21 (Guld) (After stage)
*G Defensor parts for Gundam Mk-II

|'''Victory Condition:''' (1) Defeat all enemies; (2) Defeat Shin RyoOhKi; (3) Defeat the Imperial Guard '''Defeat Condition:''' (1)(2) Any ally is defeated; (3) Ally battleship is defeated '''Skill Point:''' Defeat Shin RyuOhKi before Victory Conditions are met '''Secret Requirements:''' '''Unit Acquisition:'''
*Gundam Wing Zero Kai (Heero)
*Gundam Deathscythe Hell Kai (Duo)
*Gundam Sandrock Kai (Quatre)
*Gundam Heavyarms Kai (Trowa)
*Altron Gundam (Wufei)
*Taurus (Hilde)
*Zeta Gundam (Kamille)
*Re-GZ BWS (Four)
*Methuss (Fa)
*Gundam Mk-II (Emma)
*ZZ Gundam (Judau)
*Qubeley Mk-II (Puru)
*Qubeley Mk-II (Puru Two)
*Hyaku Shiki (Beecha)
*Gundam Mk-II (Elle)
*Jegan (Mondo)
*Megarider (Iino)
*G Defensor parts for Gundam Mk-II

|'''Victory Condition:''' (1) Bramble, Magnum, and Zangaioh are defeated; (2) Defeat all enemies; (3) Defeat Valk Baal '''Defeat Condition:''' (1) Ally battleship is defeated, Arado is defeated; (2) Cobray, Arado or Seolla are defeated; (3) Cobray, Viletta, Sanger, or Rastel are defeated '''Skill Point:''' Clear the map in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Werkbau gains the "Axion Buster" attack
*Gundam Heavyarms Kai (Trowa)
*Altron Gundam (Wufei)
*Dygenguar (Sanger)
*Huckebein Mk-III Trombe (Ratsel)
*R-GUN Powered (Viletta)

|'''Victory Condition:''' (1)(2) ZX-08 is defeated; (3) Varuch Ishar is defeated '''Defeat Condition:''' (1) Ally battleship is defeated, (2) Ally battleship is defeated, J is defeated; (3) Ally battleships is defeated, Selena, Viletta, Sanger, or Rastel are defeated '''Skill Point:''' Defeat ZX-02 in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*J-ARK (J, Tomoro)
*R-GUN Powered (Viletta)
*Dygenguar (Sanger)
*Huckebein Mk-III Trombe (Ratsel)
*Vegalion (Slay)

|-
| colspan="4" class="fc-std-sc" |'''第１３話：もう一度、自らの足で Scenario 13 - Once Again, On Your Feet'''

|-
| colspan="4" |'''Victory Condition:''' ZX-06 is defeated '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Clear the map in 6 turns; Defeat all other enemies before ZX-06 '''Secret Requirements:''' '''Unit Acquisition:'''
*Evangelion Unit 0 Custom (Rei)
*Evangelion Unit 1 (Shinji)
*Evangelion Unit 2 (Asuka)

|-
| colspan="4" class="fc-std-sc" |'''第１４話：オペレーション・ハルパー Scenario 14 - Operation Harper'''

|-
| colspan="4" |'''Victory Condition:''' Reduce Hermoz Ehad's HP to below 120000HP (E) / 90000HP (N) / 80000HP (H) '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Achieve the victory condition in 7 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*HyoRyu (HyoRyu)
*EnRyu (EnRyu)

|-
| colspan="4" class="fc-std-sc" |'''第１５話：遥かなる凱歌 Scenario 15 - A Faroff Victory Song'''

|-
| colspan="4" |'''Victory Condition:''' Defeat the Combine Primeval '''Defeat Condition:''' Ally Battleship is defeated, J is defeated '''Skill Point:''' Defeat all enemies in 7 turns, leaving the combined Primeval for last '''Secret Requirements:''' '''Unit Acquisition:'''
*J-Ark (J, Tomoro)
*ALL units are unavailable until clearing Scenario 18

|-
| colspan="4" class="fc-std-sc" |'''第１６話：導かれる魂、銀河で Scenario 16 - Souls Guided by the Galaxy'''

|-
| colspan="4" |'''Victory Condition:'''
*1st Part: Defeat all enemies
*2nd Part: Defeat all enemies
'''Defeat Condition:'''
*1st Part: Ideon is defeated
*2nd Part: Any ally is defeated
'''Skill Point:''' Defeat all enemies in 4 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Ideon (Cosmo, Kasha, Bess → Moera)
*VF-17S Nightmare (Kinryu)
*VF-17D Nightmare (Gamlin)
*VF-17D Nightmare (Docker)
*Battle 7 (Max, Exedore, Miho, Sally)
*Soloship (Bess)

|-
| colspan="4" class="fc-std-sc" |'''第１７話：ディスコード・ハーモニー Scenario 17 - Discord / Harmony'''

|-
| colspan="4" |'''Victory Condition:''' (1)(2) Defeat the Zig Mac; (3) Defeat FZ-109F Elgarthorn '''Defeat Condition:''' (1) Any ally is defeated; (2) Any ally is defeated, Zig Mac moves next to the Soloship (3) '''Skill Point:''' Meet victory the condition in 4 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Battle 7 can now transform into "Enhanced Attack Mode"
*VF-17D Nightmare (Docker)

|-
| colspan="4" class="fc-std-sc" |'''第１８話：銀河流浪 Scenario 18 - Galactic Wandering'''

|-
| colspan="4" |'''Victory Condition:'''
*1st Part: Defeat FZ-109F Elgarthorn
*2nd Part: Defeat Zig Mac
'''Defeat Condition:'''
*1st Part: Any ally is defeated
*2nd Part: Any ally is defeated
'''Skill Point:''' Meet victory conditions in 3 turns '''Secret Requirements:'''
*Duel Gundam
**Take the Earth Route
*VF-1J S Valkyrie
**Take the Earth Route
*LaGOWE
**Take the Earth Route
'''Unit Acquisition:'''
*VF-17D Nightmare (Physica)
*VF-17S (Kinryu), VF-17D (Gamlin), and VF-17D (Physica) gain the "Diamond Force Attack" combination Attack
*Ideon gains the "Omnidirectional Missile" attack
*All Ideon and Macross 7 units are lost <ul><li>Ideon (Cosmo, Kasha, Moera)</li><li>Soloship (Bess)</li><li>Battle 7 (Max, Exedore, Miho, Sally)</li><li>VF-17S Nightmare (Kinryu)</li><li>VF-17D Nightmare (Physica)</li><li>VF-17D Nightmare (Gamlin)</li>

|}
 

==Stages 19 - 33==
{| width="100%"
|- class="fc-route-h"
| width="50%" |'''Descend to Earth''' Gundam 0083 Gundam Z ZZ Gundam Char's CounterAttack Gundam Wing Gundam SEED Macross 7 Macross Plus Evangelion
| width="50%" |'''Mount a Lunar offensive''' GaoGaiGar Ideon Mazinger (Z, Great) Getter Robo Steel Jeeg Combattler V Gaiking Raideen Dancouga GoShogun

|-
| class="fc-route1" |'''第１９話：宇宙に降る星 Scenario 19 - Stars Falling in Space'''
| class="fc-route3" |'''第１９話：悪夢への招待状 Scenario 19 - A Written Invitation to a Nightmare'''

|-
|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated, Kira is defeated '''Skill Point:''' Destroy all enemies in 6 turns '''Secret Requirements:'''
*Duel Gundam
**Destroy Yzak.
'''Unit Acquisition:'''
*Nu Gundam (Amuro)
*Jegan (Katz)
*MP Nu Gundam (Kayra)
*Incom and Fin Funnel parts for MP Nu Gundam
*Kira unlocks the SEED pilot skill
*Skygrasper
*Ra Cailum (Bright, Torres)

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Destroy the Muge battleship in 6 turns (retreats at 6000HP (E) / 8000HP (N) / 10000 HP (H)) '''Secret Requirements:''' 
'''Unit Acquisition:'''
*Daiku Maryu (Pete, Midori)
*Gaiking (Sanshiro)
*Skylar (Fan Li)
*Bazolar (Yamagatake)
*Nesser (Bunta)

|-
| class="fc-route1" |'''第２０話：強襲、砂漠の虎 Scenario 20 - Assault of the Desert Tiger'''
| class="fc-route3" |'''第２０話：異邦人達の帰還 Scenario 20 - The Foreigners Return'''

|-
|'''Victory Condition:''' Defeat the Lesseps '''Defeat Condition:''' Ally battleship is defeated, Kira is defeated '''Skill Point:''' Defeat the Lesseps in 6 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Kira unlocks the SEED pilot skill
*Albion (Synapse, Paserov)
*Gundam Stamen (Kou)
*GM Cannon II (Keith)
*GM Custom (Burning)
*GM Custom (Bate)
*GM Custom (Monsha)
*GM Cannon II (Adel)
*Gundam GP01fb
*Armed Base Orchis parts for Gundam Stamen

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Destroy Helmut's Muge battleship in 4 turns (retreats at 6000HP (E) / 8000HP (N) / 10000 HP(H)) '''Secret Requirements:''' '''Unit Acquisition:'''
*Ideon (Cosmo, Kasha, Moera)
*Ideon gains the "Ideon Sword" and "Ideon Sword (MAP)" attacks
*Soloship (Bess, Hatari)

|-
| class="fc-route1" |'''第２１話：プリティ・デビル Scenario 21 - Pretty Devil'''
| class="fc-route3" |'''第２１話：裏切りの代償 Scenario 21 - The Cost of Betrayal'''

|-
|'''Victory Condition:'''
*1st Part: Gigil's ship is defeated
*2nd Part: Gigil's ship is defeated 
'''Defeat Condition:'''
*1st Part: Any ally is defeated
*2nd Part: Basara is defeated
'''Skill Point:''' Destroy Gigil before he moves adjacent to Sivil '''Secret Requirements:'''
*LaGOWE
**Waltfeld and Dacosta must both survive and get a combined total of 10 kills or more on the first half of the scenario.
*VF-1J
**Milia must get a total of 10 kills in the first half of the scenario.
'''Unit Acquisition:'''
*VF-17S Nightmare (Kinryu)
*VF-17D Nightmare (Gamlin)
*VF-17D Nightmare (Physica)
*VF-1J S Valkyrie (Milia)
*LaGOWE (Waldfelt)
*BuCUE (Dacosta)
*Skygrasper (Cagalli)
*VF-19 Kai Fire Valkyrie (Basara)
*VF-17S Nighmare (Milia)
*VF-1J S Valkyrie

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Any ally is defeated '''Skill Point:''' Destroy all enemies in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Goshogun (Shingo, Killy, Remi)
*Good Thunder (Sabranth)

|-
| class="fc-route1" |'''第２２話：砂塵の果て Scenario 22 - Beyond the Clouds of Sand'''
| class="fc-route3" |'''第２２話：発動する力、無限大 Scenario 22 - Infinite Activation Power'''

|-
|'''Victory Condition:''' (1) Defeat the Lesseps; (2) Waltfeld is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated '''Skill Point:''' Defeat the Lesseps in 5 turns '''Secret Requirements:'''
*LaGOWE
**Kira must destroy Waltfeld's LaGOWE while in SEED. (Kira has to activate SEED mode before the event that ends the stage.)
'''Unit Acquisition:'''
*Kira unlocks the SEED pilot skill

|'''Victory Condition:''' (1) Soloship reaches the computer facility; (2) Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Get the Soloship to the indicated area in 4 turns without it taking any damage '''Secret Requirements:''' '''Unit Acquisition:'''
*HyoRyu (HyoRyu)
*EnRyu (EnRyu)

|-
| class="fc-route1" |'''第２３話：エモーション・ハイ Scenario 23 - Emotion High'''
| class="fc-route3" |'''第２３話：決戦！地獄の月荒野 Scenario 23 - Decisive Battle in the Hellish Lunar Wilderness!'''

|-
|'''Victory Condition:''' (1) Defeat 2 Ghosts; (2) Defeat all enemies; (3) Basara sings to Sivil, All ZAFT forces are defeated '''Defeat Condition:''' (1) Ally battleship is defeated, Battle 7 is defeated; (2) Ally battleship is defeated, Battle 7 is defeated, Isamu or Guld are defeated; (3) Ally battleship is defeated, Isamu, Guld, or Basara are defeated '''Skill Point:''' Clear the map in 9 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*YF-19's "Full Volley" attacks gains +200 Attack power
*YF-19 and YF-21 gain the "Double Pinpoint Barrier Punch" combination attack
*Battle 7 (Max, Exedore, Miho, Sally)
*VF-19 Kai Fire Valkyrie (Basara)
*Mazinkaiser
*Shin Getter Robo

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Clear the map in 9 turns '''Secret Requirements:''' '''Unit Acquisition:'''

|-
| colspan="2" class="fc-std-sc" |'''第２４話：戦神の星で Scenario 24 - On the Planet of the War God'''

|-
| colspan="2" |'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' (1) Any ally is defeated; (2) Ally battleship is defeated '''Skill Point:''' Destroy all enemies in 3 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*VF-19 Kai Fire Valkyrie (Basara)
*VF-11 MAXL Kai (Mylene)
*VF-17 Kai Nightmare (Ray, Veffidas)
*Tallgeese III (Zechs)
*Taurus (Noin)
*Voltes V (Kenichi, Ippei, Daijiroh, Hiyoshi, Megumi)
*Daimos (Kazuya)
*Garuba FX-II (Kyoshiro, Nana)

|-
| colspan="2" class="fc-std-sc" |'''第２５話：選ばれし者、選びし者 Scenario 25 - Those Who Are Chosen, Those Who Choose'''

|-
| colspan="2" |'''Victory Condition:''' (1) Hermos is defeated; (2) Zifrud is defeated '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Clear the map in 8 turns '''Secret Requirements:''' '''Unit Acquisition:'''

|-
| colspan="2" class="fc-std-sc" |'''第２６話：かりそめの旅人 Scenario 26 - Transitory Traveler'''

|-
| colspan="2" |'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated, Temjin, Fei Yen, or Apharmd are defeated '''Skill Point:''' Destroy all enemies in 3 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Temjin 747J (Chief)
*Fei Yen the Knight (Fei)
*Apharmd The Hatter (The Hatter)

|-
| colspan="2" class="fc-std-sc" |'''第２７話：勇気ある者達の誓い Scenario 27 - The Oath of the Courageous'''

|-
| colspan="2" |'''Victory Condition:'''
*1st Part: Defeat all enemies
*2nd Part: (1) Defeat all enemies; (2) Defeat the Z-Master within (10 (E) / 7 (N) / 5 (H)) turns 
'''Defeat Condition:'''
*1st Part: Ally battleship is defeated, Gai is defeated
*2nd Part: (1) Ally battleship is defeated, Gai or J are defeated; (2) (10 (E) / 7 (N) / 5 (H)) turns have passed, Ally battleship is defeated, Gai or J are defeated 
'''Skill Point:''' Destroy all enemies in 7 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*J-Ark (J, Tomoro)

|-
| colspan="2" class="fc-std-sc" |'''第２８話：いつか星の海へ Scenario 28 - Someday, In the Sea of Stars'''

|-
| colspan="2" |'''Victory Condition:''' (1)(2) Defeat the Zonder Robo; (3) Defeat the Zonder Robo within 6 attacks from Star GaoGaiGar; (4)(5) Defeat all enemies '''Defeat Condition:''' (1) Galeon is defeated; (2) Ally battleship is defeated, Galeon is defeated; (3) Ally battleship or Gai are defeated, Zonder Robo is not defeated within 6 attacks from Star GaoGaiGar (4) Main Character is defeated; (5) Ally battleship is defeated '''Skill Point:''' Destroy the Zonuder Robo in 5 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Galeon (Galeon)
*Star GaoGaiGar/GaoGaiGar (Gai)
*YF-19 (Isamu)
*YF-21 (Guld)
*Battle 7 (Max)
*VF-17S Nightmare (Milia)
*VF-17D Nightmare (Gamlin)
*VF-17D Nightmare (Physica)
*VF-19 Kai Fire Valkyrie (Basara)
*VF-11 MAXL Kai (Mylene)
*VF-17 Kai Nightmare (Ray, Veffidas)
*HyoRyu (HyoRyu)
*EnRyu (EnRyu)
*Goldymarg (Goldymarg)
*Volfogg (Volfogg)
*Mic Sounders XIII (Mic Sounder XIII)
*Ideon (Cosmo, Kasha, Moera)
*Soloship (Bess, Hatari)
*Star GaoGaiGar (Guy, Choryujin, Goldymarg, Mic, Volfogg)
*Dygenguar (Sanger)
*Aussenseiter (Ratsel)
*R-Blade Custom (Ryusei)
*R-Gun Powered (Viletta)

|-
| colspan="2" class="fc-std-sc" |'''第２９話：押された烙印 Scenario 29 - Branded with the Mark'''

|-
| colspan="2" |'''Victory Condition:''' (1)(2) Defeat all enemies '''Defeat Condition:''' (1) Ally battleship is defeated; (2) Ally battleship is defeated, Cagalli is defeated '''Skill Point:''' Destroy all enemies in 6 turns '''Secret Requirements:'''
*Destroid Monster
**Take the Space Route
*FBz-99G
**Take the Space Route
*Strike Rouge IWSP
**Cagalli must have 30 or more kills by the end of this stage.
***Take the Alaska Route
*Duel Gundam
**Take the Alaska Route
'''Unit Acquisition:'''
*GaoFighGar (Guy)
*HyoRyu (HyoRyu)
*EnRyu (EnRyu)
*Goldymarg (Goldymarg)
*Volfogg (Volfogg)/Big Volfogg (Big Volfogg)
*Mic Sounders XIII (Mic Sounders XIII)
*AnRyu (AnRyu)
*KouRyu (KouRyu)
*Ra Cailum (Bright, Torres)

|- class="fc-route-h"
|'''Head to Alaska''' Gundam (0083, Z, ZZ, CCA, Wing, SEED) Daitarn 3 Mazinger (Z, Great) Steel Jeeg Voltes V Daimos Dancouga Evangelion
|'''Go to Space''' GaoGaiGar Ideon Getter Robo Combattler V GaiKing Raideen Goshogun Macross (DYRL, 7, Plus) Virtual On

|-
| class="fc-route2" |'''第３０話：終わらない閃光 Scenario 30 - Unending Flashes of Light'''
| class="fc-route4" |'''第３０話：ロスト・ディーヴァ Scenario 30 - Lost Diva'''

|-
|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated, Kira is defeated '''Skill Point:''' Clear the map in 7 turns '''Secret Requirements:'''
*Strike Rouge IWSP
**Mwu must defeat Dearka
**After the event, Kira must defeat Athrun while both are in SEED.
'''Unit Acquisition:'''
*Skygrasper (Cagalli)
*Strike Gundam (Kira)
*Kira unlocks the SEED pilot skill
*Cagalli unlocks the SEED pilot skill (needs verification)
*Archangel loses Natarle as a subpilot

|'''Victory Condition:''' (1)(2) Defeat all enemies '''Defeat Condition:''' (1) Any ally is defeated: (2) Ally battleship is defeated, Fire Bomber, Diamond Force, or Skull Squadron are defeated '''Skill Point:''' In 6 turns, destroy Glavil and Gavil. You must destroy Glavil before Gavil '''Secret Requirements:'''
*Gavil and FBz-99G Zaubergeran
**Gamlin must defeat Gavil
'''Unit Acquisition:'''
*YF-19 (Isamu) (Before Deploying)
*YF-21 (Guld) (Before Deploying)
*VF-1S S Valkyrie (Focker)
*VF-1S S Valkyrie (Hikaru)
*VF-1A S Valkyrie (Kakizaki)
*VF-17D Nightmare (Gamlin)
*VF-17D Nightmare (Physica)
*VF-19 Kai Fire Valkyrie (Basara)
*VF-11 MAXL Kai (Mylene)
*VF-17 Kai Nightmare (Ray, Veffidas)

|-
| class="fc-route2" |'''第３１話：青き清浄なる世界のために Scenario 31 - For Our Blue & Pure World'''
| class="fc-route4" |'''第３１話：禁断の惑星へ Scenario 31 - To the Forbidden Planet'''

|-
|'''Victory Condition:''' (1) Defeat all enemies; (2)(3) Defeat all Mobile Dolls, All ZAFT Units retreat '''Defeat Condition:''' (1)(2) Ally battleship is defeated, Heero is defeated; (3) Ally battleship is defeated '''Skill Point:''' Do not let a single ZAFT machine get shot down '''Secret Requirements:'''
*Duel Gundam
**Yzak must survive the scenario.
'''Unit Acquisition:'''
*Archangel gains Newman as a subpilot
*Freedom Gundam (Kira)
*Daitarn 3 (Banjo)
*Black Wing (Alan)

|'''Victory Condition:'''
*1st Part: Defeat all enemies
*2nd Part: Defeat Gepelnitch
'''Defeat Condition:'''
*1st Part: Any ally is defeated
*2nd Part: Ally battleship is defeated, Basara or Gamlin are defeated
'''Skill Point:''' In 7 turns, destroy Glavil and Gavil and make Gepelnitch's ship retreat (at 50,000 HP) '''Secret Requirements:'''
*Destroid Monster
**Get the Skill Point on this stage.
*Gavil and FBz-99G Zaubergeran
**Gamlin must defeat Gavil 
'''Unit Acquisition:'''
*Destroid Monster

|-
| class="fc-route2" |'''第３２話：守護神の巫女 Scenario 32 - Priestess of the Guardian God'''
| class="fc-route4" |'''第３２話：インフィニティ・ソウル Scenario 32 - Infinity Soul'''

|-
|'''Victory Condition:''' (1)(2) Defeat all enemies '''Defeat Condition:''' Any Ally is defeated; Ally battleship is defeated, Sanger or Rastel are defeated '''Skill Point:''' In 5 turns, destroy the General of Hell or Flora. '''Secret Requirements:''' '''Unit Acquisition:'''
*Dygenguar (Sanger)
*Assenseiter (Ratsel)

|'''Victory Condition:''' (1) Valgo is defeated; (2)(3) Defeat all enemies '''Defeat Condition:''' (1) Mylene, Ray, or Gamlin are defeated; (2) Basara, Mylene, Ray, or Gamlin are defeated; (3) Ideon is defeated '''Skill Point:''' In 6 turns, destroy Valgo '''Secret Requirements:'''
*Gavil and FBz-99G Zaubergeran
**Gamlin must defeat Gavil 
'''Unit Acquisition:'''
*VF-17D Nightmare → VF-17S Nightmare (Gamlin)
*VF-17D Nightmare (Docker)
**VF-17S (Gamlin), VF-17D (Physica) and VF-17D (Docker) gain the "Diamond Force Attack" combination attack
*VF-19 Kai Fire Valkyrie, VF-11 MAXL Kai, and VF-17 Kai Nightmare gain the "Sound Booster" mech ability
**All VF-19 Kai Fire Valkyrie SB Songs gain (MAP) and (ALL) combination attack variants when Sound Booster activates.
**All VF-11 MAXL Kai SB Songs gain (MAP) and (ALL) combination attack variants when Sound Booster activates.
*Ideon (Cosmo, Kasha, Moera)
** Ideon gains the "Ideon Sword" and "Ideon Sword (MAP)" attacks when IDE gauge is full, and HP is below 30%
*Soloship (Bess, Hatari)

|-
| class="fc-route2" |'''第３３話：暁への脱出 Scenario 33 - Escape to Daybreak'''
| class="fc-route4" |'''第３３話：受け継ぎし遺産 Scenario 33 - The Successor's Inheritance'''

|-
|'''Victory Condition:''' (1)(2) Defeat all enemies besides the Albion '''Defeat Condition:''' (1) Ally battleship is defeated, Kira, Shinobu, or Alan are defeated, Albion is defeated; (2) Kira, Shinobu, Alan, Mwu, or Cagalli are defeated '''Skill Point:''' In 8 turns, destroy all enemies except the Albion '''Secret Requirements:''' '''Unit Acquisition:'''
*Strike Gundam (Mwu)
*Strike Rouge (Cagailli)
*M1 Astray (Juri)
*M1 Astray (Mayura)
*M1 Astray (Asagi)
*Justice Gundam (Athrun)
*Buster Gundam (Dearka)
*Mazinger Z gains the "Giant Swing Rocket Punch" attack
*Great Mazinger gains the "Great Booster" attack
*Koutetsu Jeeg stats are enhanced and can transform into Jeeg Panzeroid
*Dancouga and Black Wing can combine into Final Dancouga.

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated, Akira or Jinguji are defeated '''Skill Point:''' In 8 turns, destroy Etzira, Valgo, Glavil, Gabro Zan, and Gije '''Secret Requirements:''' '''Unit Acquisition:'''
*VF-1A S Valkyrie (Kakizaki)
*Raideen gains the Mutron Open mech ability
*Ideon (Cosmo, Kasha, Moera)
*Soloship (Bess, Hatari)
*Battle 7 (Max, Exedore, Miho, Sally)
*VF-1S S Valkyrie (Fokker)
*VF-1S S Valkyrie (Hikaru)
*VF-1A S Valkyrie (Kakizaki)
*YF-19 (Isamu)
*YF-21 (Guld)
*VF-19 Kai Fire Valkyrie (Basara)
*VF-11 MAXL Kai (Mylene)
*VF-17 Kai Nightmare (Ray, Veffidas)
*VF-17S Nightmare (Gamlin)
*VF-17D Nightmare (Physica)
*VF-17D Nightmare (Docker)

|}
 

==Stages 34 - 44==
{| width="100%"
|- class="fc-route-h"
| width="25%" |'''Touma Route'''
| width="25%" |'''Kusuha Route'''
| width="25%" |'''Cobray Route'''
| width="25%" |'''Selena Route'''

|-
| class="fc-route1" |'''第３４話：武人の心、その意味 Scenario 34 - Why a Warrior Fights'''
| class="fc-route2" |'''第３４話：怒りの強念者 Scenario 34 - The Wrath of a Esper'''
| class="fc-route3" |'''第３４話：虚ろな魂の捕囚 Scenario 34 - Captivity of the Hollow Soul'''
| class="fc-route4" |'''第３４話：ベトレイヤー Scenario 34 - Betrayer'''

|-
|'''Victory Condition:'''
*1st Part: (1)(2) Defeat all enemies
*2nd Part: Bemidoban is defeated 
'''Defeat Condition:'''
*1st Part: (1) Ally battleship is defeated; (2) Ally battleship is defeated, Touma is defeated
*2nd Part: Touma is defeated
'''Skill Point:''' Defeat all enemies within 6 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Raioh (Touma)
*Mazinger Z, Great Mazinger and Getter Dragon gain the "F Dynamic Special" combination attack

|'''Victory Condition:'''(1)(2) Shin RyuOhKi is defeated; (3)(4) Bemidoban and Shmuel are defeated '''Defeat Condition:''' (1) Any ally is defeated; (2) Kusuha is defeated; (3) Kusuha is defeated, Ally battleship is defeated; (4) Ally battleship is defeated '''Skill Point:''' Destroy the Bemidoban (retreats (8000 (E) / 10000 (N) / 12000 (H)) HP) '''Secret Requirements:''' '''Unit Acquisition:'''
*Mazinger Z, Great Mazinger and Getter Dragon gain the "F Dynamic Special" combination attack
*Dygenguar (Sanger)
*Aussenseiter (Ratsel)

|'''Victory Condition:''' Shin RyuOhKi is defeated '''Defeat Condition:''' Ally battleship is defeated, Cobray, Arad, or Seolla are defeated '''Skill Point:''' Defeat Shin RyuOuKi within 6 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Werkbau (Cobray)
*Mazinger Z, Great Mazinger and Getter Dragon gain the "F Dynamic Special" combination attack

|'''Victory Condition:''' (1) Shmuel is defeated; (2)(3) Bemidoban defeated Shin RyuOhKi '''Defeat Condition:''' (1) Selena is defeated; (2) Ally battleship is defeated, Selena is defeated; (3) Ally battleship is defeated '''Skill Point:''' Bemidoban and Shin RyuOuKi shot down. Both flee when below (8000 (E) / 10000 (N) / 12000 (H)) HP. '''Secret Requirements:''' '''Unit Acquisition:'''
*Mazinger Z, Great Mazinger and Getter Dragon gain the "F Dynamic Special" combination attack
*Alterion (CF) (Ibis, Tsugumi)
*AS Soleares (Selena, Elma) is unavailable during the intermission

|-
| class="fc-route1" |'''第３５話：闘志、誰がために Scenario 35 - For Whom the Fighting Spirit Burns'''
| class="fc-route2" |'''第３５話：魂、久遠に Scenario 35 - The Soul, Into Eternity'''
| class="fc-route3" |'''第３５話：THE GUN OF DIS Scenario 35 - THE GUN OF DIS'''
| class="fc-route4" |'''第３５話：クロージング・ハート Scenario 35 - Closing Heart'''

|-
|'''Victory Condition:''' (1)(2) Defeat all enemies '''Defeat Condition:''' (1) Touma is defeated; (2) Ally battleship is defeated, Touma, Sanger, or Rastel are defeated '''Skill Point:''' Defeat all enemies within 4 turns of allied reinforcements arriving. '''Secret Requirements:''' '''Unit Acquisition:'''
*DaiRaioh(Touma)
*Dygenguar (Sanger)
*Aussenseiter (Ratsel)

|'''Victory Condition:''' (1)(2)(3) Shin RyuOhKi is defeated '''Defeat Condition:''' (1) Kusuha or Bullet are defeated; (2) Kusuha is defeated; (3) Ally battleship is defeated, Kusuha is defeated '''Skill Point:''' Destroy Shin RyuOhKi within 6 turns of Varuch Ben and Ishar's arrival, destroying them first. '''Secret Requirements:''' '''Unit Acquisition:'''
*GouRyu Kai (Kusuha)
*Raiko Kai (Bullet)
*Shin RyuKoOh (Kusuha, Bullet)
*Dygenguar (Sanger)
*Aussenseiter (Ratsel)

|'''Victory Condition:''' (1)(2) Bemidoban or Shmuel are defeated; (3) ??? is defeated; (4) Valk Baal is defeated '''Defeat Condition:''' (1) Cobray is defeated, (2)(3)(4) Ally battleship is defeated, Cobray is defeated '''Skill Point:''' Defeat the Bemidoban within 5 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Varuch Ben (Cobray)
*Dis Astranagant (Cobray)

|'''Victory Condition:''' (1)(2) Defeat all enemies '''Defeat Condition:''' (1) Selena is defeated; (2) Ally battleship is defeated '''Skill Point:''' Map cleared within 7 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Eslim (Selena)
*Alterion (CF) replaces Tsugumi with Slay as a Subpilot

|-
| colspan="4" class="fc-std-sc" |'''第３６話：激突！勇者VS勇者！ Scenario 36 - Clash! Brave vs. Brave!'''

|-
| colspan="4" |'''Victory Condition:'''
*1st Part: Defeat all enemies
*2nd Part: Ally battleship is defeated
'''Defeat Condition:'''
*1st Part: Star GaoGaiGar is defeated
*2nd Part: Gai is defeated
'''Skill Point:''' Defeat all enemies within 6 turns. '''Secret Requirements:'''
*EVA-01 F-Type Equipment
**Shinji must defeat Ramiel on the first part of this scenario.
*Early Nu Gundam HWS
**Amuro must have 60 or more kills by the end of the scenario.
*GP-02A
**Burning, Monsha, Bate, and Adel must have a combined killcount of 100 or more by the end of the scenario.
*Nuclear Bazooka
**Meet the requirements for GP-02A
*Black Getter
**Michiru must have 20 kills or more by the end of the scenario.
'''Unit Acquisition:'''
*Gundam GP02
*Megarider
*Re-GZ BWS
*MP Nu Gundam
*Black Getter
*VF-1S S Valkyrie (Fokker)
*VF-1S S Valkyrie (Hikaru)
*VF-1A S Valkyrie (Kakizaki)
*VF-1J S Valkyrie
*YF-19 (Isamu)
*YF-21 (Guld)
*Battle 7 (Max)
*VF-19 Kai Fire Valkyrie (Basara)
*VF-11 MAXL Kai (Mylene)
*VF-17 Kai Nightmare (Ray)
*VF-17S Nightmare (Gamlin)
*VF-17D Nightmare (Physica)
*VF-17D Nightmare (Docker
*Soloship (Bess, Hatari)
*Ideon (Cosmo, Kasha, Moera)

|-
| colspan="4" class="fc-std-sc" |'''第３７話：果て無き旅路の始まり Scenario 37 - The Beginning of an Unending Journey'''

|-
| colspan="4" |'''Victory Condition:''' (1) Defeat all enemies; (2)(3) Devariim is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated; (3) Ally battleship is defeated, Bundle, Cutnall, or Kernagul are defeated
'''Skill Point:''' All enemies destroyed within 6 turns, with Devariim being last. '''Secret Requirements:''' '''Unit Acquisition:'''
*Heavy Weapons System parts for Nu Gundam
*Evangelion Unit 0 Custom gains the "N2 Mine" MAP attack
*Evangelion Unit 1 gains the "Magoroku E Sword" attack
*Gunbuster (Noriko)
*Sizzler Black (Jung)
*Eltrium (Tashiro, Deputy Chief)
*Bundle Ship (Bundle)
*Cutnall Ship (Cutnall)
*Kernagul Ship (Kernagul)

|- class="fc-route-h"
| colspan="2" |'''Go with the Soloship''' Gundam (0083, Zeta, ZZ, CCA, Wing, SEED) Getter Robo Raideen Daitarn 3 Evangelion Ideon GaoGaiGar
| colspan="2" |'''Go with the Battle 7''' Mazinger (Z, Great) Macross (DYRL, 7, Plus) Steel Jeeg Combattler V Voltes V Gunbuster Daimos Gaiking Goshogun Dancouga Virtual On

|-
| colspan="2" class="fc-route1" |'''第３８話：運命の炎の中で Scenario 38 - Within the Fires of Destiny'''
| colspan="2" class="fc-route3" |'''第３８話：戦火は星の瞬きと Scenario 38 - The Fires of War Among the Twinkling Stars'''

|-
| colspan="2" |'''Victory Condition:'''
*1st Part: Enemy Battleship is defeated
*2nd Part: (1) Defeat all enemies; (2) Dalam's Ship is defeated
'''Defeat Condition:'''
*1st Part: Ally battleship is defeated, Ideon is defeated
*2nd Part: (1) Ally battleship is defeated; (2) Ally battleship is defeated, Cosmo is defeated
'''Skill Point:''' Clear the map within 7 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Ideon loses Moera as a subpilot
*Ideon gains the "Ideon Gun" attack

| colspan="2" |'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Defeat all enemies within 6 turns. '''Secret Requirements:''' '''Unit Acquisition:'''

|-
| colspan="2" class="fc-route1" |'''第３９話：果てに待つもの Scenario 39 - What Awaits at the End'''
| colspan="2" class="fc-route3" |'''第３９話：ただ母星のために Scenario 39 - All for the Motherworld'''

|-
| colspan="2" |'''Victory Condition:''' (1)(2)Gabro Zan is defeated '''Defeat Condition:''' (1) Ally battleship is defeated, Ryouma, Hayato, Benkei, or Michiru are defeated; (2) Ally battleship is defeated, Ryouma, Hayato, Benkei, or Cosmo are defeated '''Skill Point:''' Destroy all Buff Clan ships within 8 turns, saving Gabro Zan for last. '''Secret Requirements:''' '''Unit Acquisition:'''
* Ideon gains Gije as a subpilot
* Shin Getter-1 gains the "Shin Shine Spark" attack

| colspan="2" |'''Victory Condition:''' Heinel is defeated '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Within 7 turns, defeat all enemies, then defeat Heinel and Richter (Richter must be defeated before Heinel) '''Secret Requirements:''' '''Unit Acquisition:'''

*Goshogun gains the "GoFlasher Special" attack

|-
| colspan="2" class="fc-route1" |'''第４０話：勇者王、最後の刻！ Scenario 40 - The King of Brave’s Final Hour!'''
| colspan="2" class="fc-route3" |'''第４０話：勇気、果つる時… Scenario 40 - When Courage Fails...'''

|-
| colspan="2" |'''Victory Condition:'''
*1st Part: Defeat all enemies
*2nd Part: Ally battleship is defeated
'''Defeat Condition:'''
*1st Part: Defeat all enemies
*2nd Part: Gai is defeated
'''Skill Point:''' Defeat all enemies within 6 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*All GaoGaiGar units are lost

| colspan="2" |'''Victory Condition:''' (1)(2)(3) Defeat all enemies '''Defeat Condition:''' (1) Gai is defeated; (2) Ally battleship is defeated, Gai is defeated; (3) Ally battleship is defeated '''Skill Point:''' Defeat all enemies within 7 turns, with Palparepa Plus being the last one. '''Secret Requirements:''' '''Unit Acquisition:'''
*GaoFighGar (Gai)
*All GaoGaiGar units are lost

|-
| colspan="4" class="fc-std-sc" |'''第４１話：銀河が消滅する日 Scenario 41 - The Day the Galaxy is Extinguished'''

|-
| colspan="4" |'''Victory Condition:''' (1) Defeat all enemies; (2) GaoFighGar is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated, J is defeated '''Skill Point:''' GaoFighGar shot down by turn 7. '''Secret Requirements:'''
*Gije & Ganga Rube
**When given the option, choose to meet the opponent's challenge (first option).
'''Unit Acquisition:'''
*J-Ark (J, Tomoro)
|-
| colspan="4" class="fc-std-sc" |'''第４２話：超勇者黙示録 Scenario 42 - The Super Brave Apocalypse'''

|-
| colspan="4" |'''Victory Condition:'''
*1st Part: Defeat all enemies
*2nd Part: Genesis GaoGaiGar reaches the designated point in 4 turns
'''Defeat Condition:'''
*1st Part: Gai or J are defeated
*2nd Part: Ally battleship is defeated, Gai is defeated, 5th turn is reached
'''Skill Point:''' All enemies shot down by turn 7. '''Secret Requirements:'''
* J-Phoenix & Renais (Sub Pilot)
**Have J defeat Pia Decem on the first part of the stage. Defeat Pia Decem again to gain the attack.
'''Unit Acquisition:'''
* King J-der gains the "J-Phoenix" attack, and gains Renais as a sub-pilot
**Koryuu and Anryuu lose the "Renais Support Attack" attacks
*Genesic GaoGaiGar (Gai)
*J-Ark (J, Tomoro)
** Renais also is a sub-pilot if the conditions are met in the first part of the stage
*Goldymarg (Goldymarg)
*Big Volfogg (Volfogg)
*TenRyuJin (TenRyuJin)
*KoRyu (KoRyu)
*AnRyu (AnRyu)
*EnRyu (EnRyu)
*HyoRyu (HyoRyu)
*Mic Sounder XIII (Mic Sounder XIII)

|- class="fc-route-h"
|'''Touma Route'''
|'''Kusuha Route'''
|'''Cobray Route'''
|'''Selena Route'''

|-
| class="fc-route1" |'''第４３話：閉ざされた世界で Scenario 43 - In a Closed-Off World'''
| class="fc-route2" |'''第４３話：真の龍神 Scenario 43 - The True Dragon God'''
| class="fc-route3" |'''第４３話：人形たちの宴 Scenario 43 - The Doll’s Banquet'''
| class="fc-route4" |'''第４３話：サイレント・クライ Scenario 43 - Silent Cry'''

|-
|'''Victory Condition:'''
*1st Part: (1) Defeat all enemies; (2) Vaikran is defeated, Houle is defeated
*2nd Part: Baran is defeated
'''Defeat Condition:'''
*1st Part: (1) Ally battleship is defeated, Touma or Ryusei are defeated; (2) Ally battleship is defeated, Ryusei is defeated
*2nd Part: Touma is defeated
'''Skill Point:''' Defeat the Bemidoban within 5 turns. '''Secret Requirements:''' '''Unit Acquisition:'''

|'''Victory Condition:''' (1) Defeat Shin RyuOhKi; (2) Vaikran is defeated, Houle is defeated '''Defeat Condition:''' (1) Kusuha or Ryusei are defeated; (2) Ally battleship is defeated, Ryusei is defeated '''Skill Point:''' Defeat Shin RyuOhKi within 5 turns. '''Secret Requirements:''' '''Unit Acquisition:'''

|'''Victory Condition:'''
*1st Part: (1) Defeat all enemies; (2) Vaikran is defeated, Houle is defeated
*2nd Part: Valk Baal is defeated
'''Defeat Condition:'''
*1st Part: (1)(2) Ally battleship is defeated, Ryusei is defeated
*2nd Part: Cobray is defeated
'''Skill Point:''' Defeat the Bemidoban within 5 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Dis Astranagant (Cobray) is unavailable during the intermission

|'''Victory Condition:''' (1) Defeat all enemies; (2)(3) Vaikran is defeated, Houle is defeated'''Defeat Condition:''' (1)(2) Ally battleship is defeated, Selena, Ibis, or Ryusei are defeated (3) Ryusei is defeated'''Skill Point:''' Defeat the Bemidoban within 5 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*AS Alegrias (Selena, Elma?) Is unavailable until the next stage

|-
| class="fc-route1" |'''第４４話：闘志、未来のために Scenario 44 - Fighting Spirit, for the Future'''
| class="fc-route2" |'''第４４話：四神招魂、ここに Scenario 44 - The Four Gods Souls, Gather Here'''
| class="fc-route3" |'''第４４話：鋼の戦神 Scenario 44 - The Steel War God'''
| class="fc-route4" |'''第４４話：マイホーム・マイフレンズ Scenario 44 - My Home, My Friends'''

|-
|'''Victory Condition:'''
*1st Part: Vaikran is defeated
*2nd Part: (1)(2) Vaikran is defeated
'''Defeat Condition:'''
*1st Part: Ally battleship is defeated, Ryusei is defeated
*2nd Part: (1) Touma or Lyria are defeated; (2) Touma, Baran, or Lyria are defeated
'''Skill Point:''' Destroy the Vaikran within 5 turns. '''Secret Requirements:'''
*VF-19F Excaliburs
**Max must have a total of 60 or more kills by the end of the scenario, if you do not pick the Go to Varauta route.
*Gije & Ganga Rube
**You must pick the Go To Bozoan Route.
'''Unit Acquisition:'''
* DaiRaioh gains the "Jinrai" attack 
*Banpreios (Ryuusei, Rai, Mai)
*Dygenguar (Sanger)
*Aussenseiter (Ratsel)
*Shumel (Lyria)
*Bemidoban (Baran)

|'''Victory Condition:'''
*1st Part: Vaikran is defeated
*2nd Part: (1)(2) Vaikran is defeated
'''Defeat Condition:'''
*1st Part: Kusuha or Ryusei are defeated
*2nd Part: (1) Ally battleship is defeated, Kusuha is defeated; (2) Kusuha, Bullet, or Lyria are defeated
'''Skill Point:''' Destroy the Vaikran within 5 turns. '''Secret Requirements:'''
*VF-19F Excaliburs
**Max must have a total of 60 or more kills by the end of the scenario, if you do not pick the Go to Varauta route.
*Gije & Ganga Rube
**You must pick the Go To Bozoan Route.
'''Unit Acquisition:'''
*Banpreios (Ryuusei, Rai, Mai)
*Dygenguar (Sanger)
*Aussenseiter (Ratsel)
*Shumel (Lyria)
*Shin RyuKoOh can now transform into Shin KoRyuOh

|'''Victory Condition:'''
*1st Part: (1) Defeat all enemies; (2) Vaikran is defeated
*2nd Part: Defeat all enemies
'''Defeat Condition:'''
*1st Part: (1)(2) Ally battleship is defeated, Ryusei, Arad or Seola are defeated
*2nd Part: Ally battleship is defeated, Cobray or Lyria are defeated
'''Skill Point:''' Destroy the Vaikran within 3 turns of its arrival. '''Secret Requirements:'''
*VF-19F Excaliburs
**Max must have a total of 60 or more kills by the end of the scenario, if you do not pick the Go to Varauta route.
*Gije & Ganga Rube
**You must pick the Go To Bozoan Route.
'''Unit Acquisition:'''
*Dis Astranagant (Cobray)
*Banpreios (Ryuusei, Rai, Mai)
*Dygenguar (Sanger)
*Aussenseiter (Ratsel)
*Shumel (Lyria)

|'''Victory Condition:'''
*1st Part: (1) Valk Isher is defeated; (2) Vaikran is defeated
*2nd Part: (1)(2) Vaikran is defeated
'''Defeat Condition:'''
*1st Part: (1)(2) Ally battleship is defeated, Ryusei or Ibis are defeated
*2nd Part: (1) Ally battleship is defeated, Selena, Ibis, or Lyria are defeated; (2) Selena or Lyria are defeated
'''Skill Point:''' Destroy the Vaikran within 3 turns of its arrival. '''Secret Requirements:'''
*VF-19F Excaliburs
**Max must have a total of 60 or more kills by the end of the scenario, if you do not pick the Go to Varauta route.
*Gije & Ganga Rube
**You must pick the Go To Bozoan Route.
'''Unit Acquisition:'''
*Banpreios (Ryuusei, Rai, Mai)
*Dygenguar (Sanger)
*Aussenseiter (Ratsel)
*Shumel (Lyria)
*Alterion (CF) replaces Slay with Tsugumi as a subpilot
*Vegalion (Slay)
**Alterion (CF) and Vegalion can combine into Hyperion

|}
 

==Stages 45 - 48==
{| width="100%"
|- class="fc-route-h"
| colspan="2" |'''Go to Earth'''
| colspan="2" |'''Go to Space'''

|- class="fc-route-h"
| width="25%" |'''Search for Irui''' Mazinger (Z, Great) Getter Robo Kotetsu Jeeg Gaiking Dancouga
| width="25%" |'''Fight against ZAFT''' Gundam (0083, Z, ZZ, CCA) Gundam Wing Gundam SEED Evangelion
| width="25%" |'''Go to Varauta''' Macross (DYRL, 7, Plus) GoShogun Daitarn 3 Gunbuster
| width="25%" |'''Go to Boazan''' Ideon Combattler V Voltes V Daimos Raideen GaoGaiGar Virtual On

|-
| class="fc-route1" |'''第４５話：とらわれの心、叫ぶ時 Scenario 45 - When the Captive Heart Cries Out'''
| class="fc-route2" |'''第４５話：忍び寄る終焉 Scenario 45 - Creeping Death'''
| class="fc-route3" |'''第４５話：悪夢の突入作戦 Scenario 45 - Charging into a Nightmare'''
| class="fc-route4" |'''第４５話：もう一つの母星ボアザン Scenario 45 - Another Mother Planet - Boazan'''

|-
|'''Victory Condition:''' (1) Defeat all enemies: (2) Legion is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated '''Skill Point:''' Defeat all enemies within 7 turns '''Secret Requirements:'''
'''Unit Acquisition:'''

|'''Victory Condition:''' (1) Defeat all enemies; (2) All Angels are defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated, Shinji, Asuka, or Rei are defeated '''Skill Point:''' Defeat all enemies within 5 turns. '''Secret Requirements:'''
*Early Nu Gundam HWS
**If you did not receive it on Scenario 37, Amuro must have 60 or more kills by the end of the scenario.
*EVA-01 F-Type Equipment(optional)
**Shinji must defeat Armisael.
*Neue Ziel
**Kou must have 40 or more kills than Keith by the end of the scenario.
*Val Varo
**Keith must have 20 or more kills than Kou by the end of the scenario.
*Gerbera Tetra
**Kou and Keith's killcounts must be within 6 of one another by the end of the scenario.
*Quin Mantha
**The sum of Ple and Ple 2's killcounts must be a number ending in 5 at the end of the scenario.
*Haman's Qubeley
**The sum of Ple and Ple 2's killcounts must be a number ending in 0 at the end of the scenario.
*MP Qubeleys
**The sum of Ple and Ple 2's killcounts must be a number ending in 7 at the end of the scenario.
*Doven Wolf
**The sum of Beecha and Mondo's killcounts must be a number ending in 0 at the end of the scenario.
*Geymalk
**The sum of Beecha and Mondo's killcounts must be a number ending in 5 at the end of the scenario.
*Strike Rouge IWSP
**The sum of Cagalli, Julie, Mayura, and Asagi's killcounts must be 100 or more by the end of the scenario.
*Early Full Armor ZZ Gundam
**Judau, Mondo, Beecha, Elle, Roux, and Iino's combined killcounts must be greater than 115 by the end of this scenario.
'''Unit Acquisition:'''
*Neue Ziel OR Val Varo OR Gerbera Tetra
*Quin Mantha OR Haman's Qubeley OR Mass Production Qubeley (x2)
*Doven Wolf OR Geymalk
*Strike Rougue IWSP
*Heavy Weapon System for Nu Gundam
*Full Armor Parts for ZZ Gundam
*Evangelion Unit 2 gains the "A.T. Field" attack
*Evangelion Unit 0 Custom gains the "Lance of Longinus" attack

|'''Victory Condition:'''
*1st Part: All allies reach the designated point, aside Battle 7
*2nd Part: Any ally reaches the designated point
'''Defeat Condition:'''
*1st Part: Any ally is defeated
*2nd Part: Any ally is defeated
'''Skill Point:''' Defeat all enemies before moving a unit to the target area. '''Secret Requirements:'''
'''Unit Acquisition:'''
*The following all gain the "Large Anti-Ship Reaction Missile" attack
**VF-1S S Valkyrie (Focker), VF-1S S Valkyrie (Hikaru), VF-1A S Valkyrie (Kakizaki)
**VF-17S Nightmare (Gamlin), VF-17D Nightmare (Docker), VF-17D Nightmare (Physica)
**YF-19 (Isamu), YF-21 (Guld)

|'''Victory Condition:''' Zartan is defeated '''Defeat Condition:''' Any ally is defeated '''Skill Point:''' Destroy all other enemies before destroying Zaltan. '''Secret Requirements:'''
'''Unit Acquisition:'''
*Voltes V is unavailable during the intermission
*Daimos is unavailable during the intermission

|-
| class="fc-route1" |'''第４６話：さらば父よ、戦士達の旅立ち Scenario 46 - Farewell, Father! The Warriors Depart'''
| class="fc-route2" |'''第４６話：永遠を信じて Scenario 46 - Believe in Eternity'''
| class="fc-route3" |'''第４６話：野望の第４惑星 Scenario 46 - The Fourth Planet of Ambition'''
| class="fc-route4" |'''第４６話：崩れゆく邪悪の塔 Scenario 46 - The Collapsing Tower of Evil'''

|-
|'''Victory Condition:''' (1) Steel Jeeg persuades Flora; (2) Defeat Yamata no Orochi, Demonica, and the Dragon Ship; (3) '''Defeat Condition:''' (1) Flora is defeated, Ally battleship is defeated, Kouji, Tetsuya, or Steel Jeeg are defeated; (2) Yamata no Orochi reaches the designated point, Ally battleship is defeated, Kouji, Tetsuya or Steel Jeeg are defeated '''Skill Point:''' Destroy Ryuuma and the Grand Marshall of Hell within 8 turns. '''Secret Requirements:'''
*Minmei's Disc
**Move Boss's squad onto either 'Hut' tile on the beach, and you will pick up the item
'''Unit Acquisition:'''
*Mazinkaizer gains the "Kaizer Nova" attack and Flight (S Rank in Air)

|'''Victory Condition:''' (1)(2) Defeat all enemies; (3) The Dominion withdraws '''Defeat Condition:''' (1) Any ally is defeated; (2)(3) Ally battleship is defeated, Kira or Athrun are defeated '''Skill Point:''' Destroy the Dominion (retreats at (10000HP (E) / 15000HP (N)/20000HP (H)) '''Secret Requirements:''' '''Unit Acquisition:'''
*Eternal (Lacus, Andrew)
*BuCUE
*METEOR parts for Freedom Gundam
*METEOR parts for Justice Gundam
*LaGOWE

|'''Victory Condition:''' (1) Guide all enemies east past the designated line; (2) All allies reach the escape point '''Defeat Condition:''' (1) Any ally is defeated, Any enemy is defeated; (2) Any ally is defeated '''Skill Point:''' Clear the map by defeating all enemies within 8 turns of the victory condition change '''Secret Requirements:'''
*VF-19F Excaliburs
**Max must get 15 or more kills on this scenario.
'''Unit Acquisition:'''
*VF-22S Sturmvogel II (Max)
*FBz-99G Zaubergeran (Gamlin)
*VF-19 Kai Fire Valkyrie gains the song "TRY AGAIN"
**VF-19 Kai Fire Valkyrie, VF-11 MAXL Kai, and VF-17 Kai Nightmare gain the "TRY AGAIN" (MAP) and (ALL) combination attack

|'''Victory Condition:''' (1) None; (2) Warchimedes is defeated; (3) Janera is defeated '''Defeat Condition:''' (1) Any friendly unit is defeated, Voltes V or Daimos are defeated; (2)(3) Ally battleship is defeated, Hyouma, Ken'ichi, Kazuya, or Heinel are defeated '''Skill Point:''' Destroy all enemies and finish the stage within 10 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Combattler V, Voltes V, and Daimos gain the "Choudenji SeiKenZuki" combination attack

|-
| class="fc-route1" |'''第４７話：神になろうとした男 Scenario 47 - The Man Who Tried to Become a God'''
| class="fc-route2" |'''第４７話：ヒトの見た夢 Scenario 47 - The Dream People Saw'''
| class="fc-route3" |'''第４７話：大宇宙の意志 Scenario 47 - The Will of the Universe'''
| class="fc-route4" |'''第４７話：因果の海で Scenario 47 - In the Sea of Causality'''

|-
|'''Victory Condition:''' (1) Defeat all enemies; (2) Shapiro is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated '''Skill Point:''' Destroy Shapiro within 6 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Gaiking and Daiku Maryuu gain the "Giant Cutter Upside-down Slash" combination attack

|'''Victory Condition:''' (1)(2)(3) Defeat all enemies; '''Defeat Condition:''' (1) Ally battleship is defeated, Kira, Mwu, or Dearka are defeated; (2) Kira is defeated; (3) The Vesalius is defeated '''Skill Point:''' Orga, Clotho and Shani shot down before Fllay reaches the Dominion. '''Secret Requirements:''' '''Unit Acquisition:'''

|'''Victory Condition:''' (1)(2)(3) Defeat all enemies '''Defeat Condition:''' (1) Any ally is defeated; (2) Ally battleship is defeated, Bundle is defeated; (3) Ally battleship is defeated, Bundle, Gamlin, or Mylene are defeated '''Skill Point:''' Destroy all SMTC units within 5 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*VF-19S Excalibur (before deployment)
*VF-19F Excalibur (x2) (before deployment)
*Bundle's Ship (Bundle, Cutnal, Kernagul)

|'''Victory Condition:'''
*1st and 2nd Part: Defeat all enemies within (5 (E) / 4 (N) / 3 (H)) turns
*3rd and 4th Part: Defeat all enemies within (4 (E) / 3 (N) / 2 (H)) turns
*5th Part: Defeat all enemies within (8 (E) / 7 (N) / 6 (H)) turns
'''Defeat Condition:'''
*1st and 2nd Part: Ally battleship is defeated, Turn (6 (E) / 5 (N) / 4 (H)) is reached
*3rd and 4th Part: Ally battleship is defeated, Turn (5 (E) / 4 (N) / 3 (H)) is reached
*5th Part: Ally battleship is defeated, Turn (9 (E) / 8 (N) / 7 (H)) is reached
'''Skill Point:''' During the 5th Part: Shoot down the two Gataman Zans before the Gabro Zan '''Secret Requirements:''' '''Unit Acquisition:'''

|-
| colspan="2" class="fc-route1" |'''第４８話：失われた者たちへの鎮魂歌 Scenario 48 - Requiem for the Lost'''
| colspan="2" class="fc-route4" |'''第４８話：銀河に死す Scenario 48 - To Die in the Galaxy'''

|-
| colspan="2" |'''Victory Condition:''' (1) Deathgaia, Gildrome, and Helmut are defeated; (2) Mute Zalbados is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated '''Skill Point:''' Defeat all enemies within 6 turns after Muge Zalbados appears, then defeat Muge Zalbados '''Secret Requirements:'''
*Early Nu Gundam HWS
**If you did not receive it on Scenario 37 or 45, Amuro must have 60 or more kills by the end of the scenario.
'''Unit Acquisition:'''

| colspan="2" |'''Victory Condition:''' (1) Defeat all enemies; (2) Gollum or Zomd are defeated; (3) Defeat all enemies; (4) Gabro Zan is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated, Basara is defeated; (3)(4) Ally battleship is defeated, Ideon is defeated '''Skill Point:''' Destroy GaviGla (retreats at 8000HP (E) / 10000HP (N) / 12000HP (H)) '''Secret Requirements:'''
*Early Nu Gundam HWS
**If you did not receive it on Scenario 37 or 45, Amuro must have 60 or more kills by the end of the scenario.
*Gije & Ganga Rube
**The Ide Gauge must reach level 5 during this scenario.
'''Unit Acquisition:'''
*Ideon replaces Gije with Dek as a Subpilot
*Battle 7 gains the "Large Anti-Ship Reaction Missile" attack
*VF-19 Kai Fire Valkyrie (Basara) is unavailable during the intermission

|}
 

==Stages 49 - 58==
{| width="100%"
|-
| colspan="3" class="fc-std-sc" |'''第４９話：銀河に響く歌声 Scenario 49 - Songs Resounding Through the Galaxy'''

|-
| colspan="3" |'''Victory Condition:'''
*1st Part: Defeat all enemies, In 5 turns Battle 7 reaches the designated point
*2nd Part: (1) In 6 turns, Battle 7 reaches the designated point; (2)(3)(4) Gepelnitch is defeated
'''Defeat Condition:'''
*1st Part: Ally battleship is defeated, Battle 7 doesn't reach the designated point by turn 6
*2nd Part: (1) Ally battleship is defeated, Mylene or Ray are defeated, Battle 7 doesn't reach the designated point by turn 7; (2) Ally battleship is defeated, Ray is defeated; (3) Ally battleship is defeated, Basara, Mylene, or Ray are defeated; (4) Ally battleship is defeated, Basara, Mylene, Ray, or Sybil are defeated
'''Skill Point:''' GaviGla is defeated (in the 1st part) '''Secret Requirements:'''
*Gavil and FBz-99G Zaubergeran
**If Gamlin has over 50 kills, Gamlin must defeat GaviGla during the first half of the scenario. During the second half of the scenario, do not defeat Gavil.
'''Unit Acquisition:'''
*VF-22S Sturmvogel II (Max)
*VF-22S Sturmvogel II (Milia)
*Sybil (Sybil)
**VF-19 Kai Fire Valkyrie, VF-11 MAXL Kai, and VF-17 Kai Nightmare, and Sybil gain the "TRY AGAIN" combination attack
*FBz-99G Zaubergeran (Gavil)

|-
| colspan="3" class="fc-std-sc" |'''第５０話：二つの門と二つの星 Scenario 50 - Two Gates, Two Stars'''

|-
| colspan="3" |'''Victory Condition:''' (1) Hermodr Echad is defeated; (2) Zfield is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated '''Skill Point:''' Destroy the Hermodr Echad within 5 turns. '''Secret Requirements:'''
*Duel Gundam & Yzak
**Dearka's killcount must be 50 or more by the end of the scenario.
'''Unit Acquisition:'''

|-
| colspan="3" class="fc-std-sc" |'''第５１話：終わらない明日へ Scenario 51 - To an Unending Tomorrow'''

|-
| colspan="3" |'''Victory Condition:'''
*1st Part: (1) Destroy all nuclear missiles; (2) Dominion is defeated & Athrun reaches the designated point
*2nd Part: Destroy the Genesis reactor within 4 turns
'''Defeat Condition:'''
*1st Part: (1) Any missile reaches the end of the map, Ally battleship is defeated, Kira, Athrun or Cagalli are defeated; (2) Ally battleship is defeated, Kira, Athrun or Cagalli are defeated
*2nd Part: Kira is defeated, reach the 5th turn
'''Skill Point:''' Destroy the Providence Gundam (in the 2nd part) '''Secret Requirements:'''
*Duel Gundam & Yzak
**During the first half of the scenario, destroy all of the nukes, then have Dearka battle with Yzak
**Both must survive the first half of the scenario
'''Unit Acquisition:'''
*Cagalli unlocks the SEED pilot skill
*Lacus unlocks the SEED pilot skill
*Duel Gundam (Yzak)

|-
| colspan="3" class="fc-std-sc" |'''第５２話：世界の中心でアイを叫んだもの Scenario 52 - The One Who Cried "Love" at the Heart of the World'''

|-
| colspan="3" |'''Victory Condition:'''
*1st Part: (1)(2)(3) Defeat all enemies (4)(5) EVA Unit 1 is defeated
*2nd Part: EVA Unit 1 is defeated
'''Defeat Condition:'''
*1st Part: (1) Any ally is defeated; (2) Shinji is defeated; (3)(4) Ally battleship is defeated; (5) Ally battleship is defeated, Reach the 6th turn after the "Cross" grows from the Earth
*2nd Part: Shinji is defeated
'''Skill Point:''' Asuka survives for 2 full turns. '''Secret Requirements:'''
*Neue Ziel
**Kou must have 40 or more kills than Keith by the end of the scenario.
*Val Varo
**Keith must have 20 or more kills than Kou by the end of the scenario.
*Gerbera Tetra
**Kou and Keith's killcounts must be within 6 of one another by the end of the scenario.
*Quin Mantha
**The sum of Ple and Ple 2's killcounts must be a number ending in 5 at the end of the scenario.
*Haman's Qubeley
**The sum of Ple and Ple 2's killcounts must be a number ending in 0 at the end of the scenario.
*MP Qubeleys
**The sum of Ple and Ple 2's killcounts must be a number ending in 7 at the end of the scenario.
*Doven Wolf
**The sum of Beecha and Mondo's killcounts must be a number ending in 0 at the end of the scenario.
*Geymalk
**The sum of Beecha and Mondo's killcounts must be a number ending in 5 at the end of the scenario.
*EVA-01 F-Type Equipment
**Shinji must defeat Zeruel on the first part of this scenario.
**Shinji must defeat EVA-01 on the second part of this scenario.
**The sum of Shinji, Asuka, and Rei's killcounts must be 250 or more, or 150 or more if you met the requirement on scenario 45.
*Hi-Nu Gundam
**Amuro and Bright's combined killcounts must be greater than 120 by the end of this scenario.
*Sazabi
**Amuro and Kamille's killcount must be 50 or more each at the end of this scenario. You will receive it at the start of next scenario.
*Strike Rouge IWSP
**If you did not receive it on Scenario 45, the sum of Cagalli, Julie, Mayura, and Asagi's killcounts must be 100 or more by the end of the scenario.
*Destroid Monster
**If you did not receive it on Scenario 31, the sum of Fokker, Hikaru, and Kakizaki's killcounts must be 100 or more by the end of this scenario.
'''Unit Acquisition:'''
*Evangelion Unit 0 (Kaowru)
*Evangelion Unit 0 loses the "Lance of Longinus" attack

|-
| colspan="3" class="fc-prologue" |'''Beyond this point, losing Ideon results in a Game Over'''
|-
| colspan="3" class="fc-std-sc" |'''第５３話：出航！銀河殴り込み艦隊！ Scenario 53 - The Galactic Assault Fleet Takes Sail!'''

|-
| colspan="3" |'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' 230 enemy units shot down by turn 7. '''Secret Requirements:''' '''Unit Acquisition:'''
*All secret units and parts are given after the stage begins <ul><li>Neue Ziel OR Val Varo OR Gerbera Tetra</li><li>Quin Mantha OR Haman's Qubeley OR Mass Production Qubeley (x2)</li><li>Doven Wolf OR Geymalk</li><li>Strike Rougue IWSP</li><li>Hi-Nu Gundam</li><li>Sazabi</li><li>Destroid Monster</li><li>F-Type Equipment for Evangelion Unit 1</li><li>Atomic Bazooka parts for GP-02</li><li>Heavy Weapon System for Nu Gundam</li><li>Full Armor Parts for ZZ Gundam</li></ul>
*MP Nu Gundam
**Fin Funnel parts for MP Nu Gundam
*Gunbuster adds Kazumi as a Subpilot
**Gunbuster gains the "Super Inazuma Kick" attack
*Ra Cailum gains the "Nuclear Missile" MAP and ALL attacks

|-
| colspan="3" class="fc-std-sc" |'''第５４話：神に守られし星 Scenario 54 - The Planet Guarded by the Gods'''

|-
| colspan="3" |'''Victory Condition:'''
*1st Part: (1) Defeat all enemies; (2) The SRX Team rescues [https://akurasu.net/wiki/Super_Robot_Wars/Alpha_3/Info_Dump#Finding_Aya_on_Scenario_54 Aya]; (3) Jumora is defeated
*2nd Part: Bemidoban is defeated
'''Defeat Condition:'''
*1st Part: (1)(2) Ally battleship is defeated, Ryusei or Viletta are defeated; (3) Ally battleship is defeated, Ryusei, Viletta, Baran, or Lyria are defeated
*2nd Part: Sanger is defeated
**2nd Part (Touma Route): Touma is defeated
'''Skill Point:''' Clear the map within 10 turns, with both Hermoz defeated '''Secret Requirements:''' '''Unit Acquisition:'''
*Banpreios adds Aya as a Subpilot
**Branpreios gains the "Tenjou Tenge Nendou Musou-ken" attack
**Branpreios and R-GUN Powered gain the "Tenjou Tenge Ichigeki Hissatsu-ho" combination attack
*Shumel (Lyria)
*Bemidoban (Baran)

|-
| colspan="3" class="fc-std-sc" |'''第５５話：まつろわぬ神 Scenario 55 - The God Who Resists Order'''

|-
| colspan="3" |'''Victory Condition:'''
*1st Part: (1) Defeat all enemies; (2) Defeat Gebel GanEden
*2nd Part: (1) Defeat all enemies; (2) Defeat Gebel GanEden
'''Defeat Condition:'''
*1st Part: (1)(2) Ally battleship is defeated
*2nd Part: (1)(2) Ally battleship is defeated
'''Skill Point:''' Within 6 turns, defeat both Zfiruds '''Secret Requirements:''' '''Unit Acquisition:'''

|-
| colspan="3" class="fc-std-sc" |'''第５６話：終わりなき総力戦 Scenario 56 - Unending Total War'''

|-
| colspan="3" |'''Victory Condition:'''
*1st Part: Drowa Zan is defeated within 5 turns
*2nd Part: (1) Soloship move next to the Bairal Jinn; (2) Any unit reaches the designated point
'''Defeat Condition:'''
*1st Part: Ally battleship is defeated, 6th turn is reached
*2nd Part: (1)(2) Ally battleship is defeated
'''Skill Point:''' Clear the map within 7 turns. '''Secret Requirements:'''
*Gije & Ganga Rube
**You must pick the Fight The Buff Clan option at the end of the scenario.
*Bad Ending Route
**On New Game+, choose to fight (first option)
'''Unit Acquisition:'''

|- class="fc-route-h"
| width="40%" |'''Fight The Buff Clan''' Ideon, Getter Robo Combattler V, Voltes V, Daimos Daitarn 3 Gundam (0083, Zeta, ZZ, CCA, Wing, SEED)
| width="40%" |'''Fight The STMC''' Mazinger (Z, Great), Steel Jeeg, Raiden Goshogun, Dancouga, Gaiking Macross (DYRL, Plus, 7) Gunbuster, Evangelion, GaoGaiGar Virtual On
| width="20%" |'''Bad Ending '''

|-
| class="fc-route1" |'''第５７話：憎しみの環の中で Scenario 57 - In a Circle of Hatred'''
| class="fc-route3" |'''第５７話：終わりの始まり Scenario 57 - The Beginning of the End'''
| class="fc-prologue" |'''イデ発動ルート最終話：銀河に君と''' '''Ide Activation Final Scenario - With You In The Galaxy'''

|-
|'''Victory Condition:'''
*1st Part: (1) Defeat all enemies; (2) Soloship reaches the designated point
*2nd Part: Defeat all enemies within (11 (E) / 9 (N) / 7 (H)) turns
'''Defeat Condition:'''
*1st Part: (1)(2) All allies are defeated
*2nd Part: Turn (12 (E) / 10 (N) / 8 (H)) is reached, Ally battleship is defeated
'''Skill Point:''' Defeat all enemies within (10 (E) / 8 (N) / 6 (H)) turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Ganga Rube (Gije)

|'''Victory Condition:''' (1)(2) Defeat all enemies '''Defeat Condition:''' (1) Eltrium is defeated; (2) Ally battleship is defeated '''Skill Point:''' Defeat all enemies within 7 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Eltrium (Tashiro, Deputy Chief)

| rowspan="4" |'''Victory Condition:''' Bairal Jinn is defeated '''Defeat Condition:''' Ally battleship is defeated '''Secret Requirements:''' '''Unit Acquisition:'''

|-
| class="fc-route1" |'''第５８話：発動 Scenario 58 - Activation'''
| class="fc-route3" |'''第５８話：死闘、未来を懸けて Scenario 58 - The Mortal Struggle for the Future'''

|-
|'''Victory Condition:'''
*1st Part: Bairal Jinn is defeated
*2nd Part: Bairal Jinn is defeated
'''Defeat Condition:'''
*1st Part: Ally battleship is defeated
*2nd Part: Ally battleship is defeated
'''Skill Point:''' Destroy the Bairal Jinn within six turns. '''Secret Requirements:''' '''Unit Acquisition:'''

|'''Victory Condition:''' (1)(2) Defeat all enemies '''Defeat Condition:''' (1) Ally battleship is defeated; Drowa Zan is defeated, Ally battleship is defeated(2) '''Skill Point:''' All Buff Clan units survive the stage. '''Secret Requirements:''' '''Unit Acquisition:'''

|}
 

==Stages 59 - END==
{| width="100%"
|-
| colspan="2" class="fc-std-sc" |'''第５９話：果てしなき流れの果てに Scenario 59 - At the End of the Unending Flow'''

|-
| colspan="2" |'''Victory Condition:'''
*1st Part: Reach the 11th turn
*2nd Part: Defeat all enemies, 6th turn is reached
'''Defeat Condition:'''
*1st Part: Ally battleship is defeated, Any enemy enters the designated area
*2nd Part: Any enemy enters the designated area, Ally battleship is defeated, Noriko or Jung are defeated
'''Skill Point:''' Defeat all enemies within 5 turns. '''Secret Requirements:''' '''Unit Acquisition:'''

|- class="fc-route-h"
| width="50%" |'''Normal Ending - 56 Skill Points or less, OR turn count 421 or more'''
| width="50%" |'''Good Ending - 57 Skill Points or more AND turn count 420 or less'''

|-
| class="fc-route1" |'''最終話: 終焉の銀河 Final Scenario - A Galaxy of Death'''
| class="fc-route3" |'''最終話: 今遥か遠い彼方… Final Scenario - Now, The Faraway Yonder'''

|-
|'''Victory Condition:''' (1) ??? is destroyed; (2) Kaiser Ephres is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated '''Secret Requirements:''' '''Unit Acquisition:'''

|'''Victory Condition:''' (1) ??? is destroyed; (2)(3) Kaiser Ephres is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated; (3) Irui is defeated '''Secret Requirements:''' '''Unit Acquisition:'''
*Nashim Gan Eden (Irui)

|}

Super Robot Wars/Alpha 3/Info Dump

2023-06-18T02:22:10Z

KomodoWork:

Relevant info goes here.

== Info Dump==

===Special Sub-Scenario Carryover Glitch===
This glitch lets you have 1 save with all 4 main characters and their end-game mechas. 
To access the Sub-Scenarios 
*Select "Options" at the Main Menu
*Select the 2nd to last selection
*Click any yellow boxes with exclamations and confirm to start the scenario

To access the Special Sub-Scenario 
*Complete the Scenario Chart 100%.
*Scroll down to the bottom of the Scenario tree
*Select the yellow box at the very bottom, below the final stages!

Once you clear out all the enemies, there will be some dialogue and when given the choice, choose the Top Option, the bottom spawns in more enemies. 
Once at the main menu, start a new game, do not load a clear save!

After you finish the first level, in the intermission menu; you should see that all the parts carried over, all the units and pilots carried over at level 70 with 999PP each. 
<tt>You'll also have 2 of the same main character, one at level 1 and one at level 70.</tt>

credit goes to [https://www.youtube.com/channel/UCdVWS0ciTHRW0dVNzRMhA8w BassGSothertype]
 

===Finding Aya on Scenario 54===
During Scenario 543, victory conditions change for the SRX Team to find Aya; "SRXチームがアヤを救出する". 3 points are present where the objective could be, but the point is always fixed based on the 2nd digit of Ryusei's level at the time the victory conditions change.

*If 0-1: Southern location (N24-E16)
*If 2-5: Eastern location (N17-E07)
*if 6-9: Western location (N12-E22)

The stage itself has no time limit concerning this matter, however most players will be keeping their Skill Point requirements in mind, and the game's overall turn count for the ending.

==Links==
http://srw-alpha-3.seesaa.net/ 
https://suparobo3-alpha.kouryaku.red/

Super Robot Wars/Alpha 3/Info Dump

2023-06-18T02:19:04Z

KomodoWork: /* Mutron Release */ Info already positioned in a more proper place

Relevant info goes here.

===Special Sub-Scenario Carryover Glitch===
This glitch lets you have 1 save with all 4 main characters and their end-game mechas. 
To access the Sub-Scenarios 
*Select "Options" at the Main Menu
*Select the 2nd to last selection
*Click any yellow boxes with exclamations and confirm to start the scenario

To access the Special Sub-Scenario 
*Complete the Scenario Chart 100%.
*Scroll down to the bottom of the Scenario tree
*Select the yellow box at the very bottom, below the final stages!

Once you clear out all the enemies, there will be some dialogue and when given the choice, choose the Top Option, the bottom spawns in more enemies. 
Once at the main menu, start a new game, do not load a clear save!

After you finish the first level, in the intermission menu; you should see that all the parts carried over, all the units and pilots carried over at level 70 with 999PP each. 
<tt>You'll also have 2 of the same main character, one at level 1 and one at level 70.</tt>

credit goes to [https://www.youtube.com/channel/UCdVWS0ciTHRW0dVNzRMhA8w BassGSothertype]
 

===Finding Aya on Scenario 54===
During Scenario 543, victory conditions change for the SRX Team to find Aya; "SRXチームがアヤを救出する". 3 points are present where the objective could be, but the point is always fixed based on the 2nd digit of Ryusei's level at the time the victory conditions change.

*If 0-1: Southern location (N24-E16)
*If 2-5: Eastern location (N17-E07)
*if 6-9: Western location (N12-E22)

The stage itself has no time limit concerning this matter, however most players will be keeping their Skill Point requirements in mind, and the game's overall turn count for the ending.

==Links==
http://srw-alpha-3.seesaa.net/ 
https://suparobo3-alpha.kouryaku.red/

Super Robot Wars/Alpha 3/Flow Chart

2023-06-10T18:15:12Z

KomodoWork: /* Stages 45 - 48 */

Units and Pilots in Black join your team. 
Units and Pilots in Orange are available for that stage, then leave. 
Units and Pilots in Blue have special requirements. Check the [[../Secrets|Secrets]] page for more details. 
Units and Pilots in Red previously joined, but from this point, are rendered unusable. Those lost permanently are marked so, while others rejoin later on. 
Information in Green are upgrades for units already in your party.

==Stages 01 - 18==
{| width="100%"
|- class="fc-route-h"
| width="25%" |'''Touma Route'''
| width="25%" |'''Kusuha Route'''
| width="25%" |'''Cobray Route'''
| width="25%" |'''Selena Route'''

|-
| class="fc-route1" |'''第１話：闘志、炎に燃ゆる Scenario 1 - Within the Flames, Fighting Spirit Rises'''
| class="fc-route2" |'''第１話：出撃！鋼の龍虎 Scenario 1 - Launch! Dragon and Tiger of Steel'''
| class="fc-route3" |'''第１話：虚空からの転生 Scenario 1 - Reincarnated from the Void'''
| class="fc-route4" |'''第１話：シークレット・ミッション Scenario 1 - Secret Mission'''

|-
|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Any allied unit is defeated '''Skill Point:''' Defeat all enemies in 3 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Raioh (Touma)
*GaoGaiGar (Guy)
*Goldymarg (Goldymarg)
*HyoRyu (HyoRyu)
*EnRyu (EnRyu)

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Any allied unit is defeated '''Skill Point:''' Defeat all enemies in 2 turns '''Secret Requirements:'''
*Bullet
**You must be playing as Kusuha to recruit Bullet.
'''Unit Acquisition:'''
*Gouryu Kai (Kusuha)
*Raikou Kai (Bullet)
*Mazinkaiser (Kouji)
*Diana A (Sayaka)
*Shin Getter (Ryoma, Hayato, Benkei)
*Lady Command (Michiru)

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' (1) Werkbau is defeated; (2) Werkbau is defeated, ally battleship is defeated '''Skill Point:''' Defeat all enemies in 5 turns after enemy reinforcements show up '''Secret Requirements:'''
*Arado and Seolla
**You must be playing as Cobray to recruit Arado and Seolla.
'''Unit Acquisition:'''
*Werkbau (Cobray)
*Nu Gundam (Amuro)
*Ra Cailum (Bright, Torres)
*MP Nu Gundam (Kayra)
*Jegan (Katz)
*Incom & Funnel parts for MP Nu Gundam

|'''Victory Condition:''' (1) All enemies except Salamis Kai shot down; (2) R-Gun Powered shot down '''Defeat Condition:''' (1) Selena shot down, Salamis Kai shot down; (2) Selena shot down '''Skill Point:''' Defeat all enemies except the Salamis Kai in 4 turns '''Secret Requirements:'''
*Ibis and Slay
**You must be playing as Selena to recruit Ibis and Slay.
'''Unit Acquisition:'''
*AS Soleares (Selena, Elma)
*Albion (Synapse, Paserov)
*GP03 Dendrobium (Kou)
*GM Cannon II (Keith)
*GM Custom (Burning)
*GM Custom (Bate)
*GM Custom (Monsha)
*GM Cannon II (Adel)
*Zeta Gundam (Kamille)
*Re-GZ BWS (Four)
*Methuss (Fa)
*Super Gundam (Emma)
*Armed Fortress Orchis parts for Gundam Stamen
*G Defensor parts for Gundam Mk-II

|-
| class="fc-route1" |'''第２話: さらばGGG、さらば勇者 Scenario 2 - Farewell, GGG! Farewell, Braves!'''
| class="fc-route2" |'''第２話: 新たなる侵略者！立ち上がれV Scenario 2 - New Invaders! Rise Up, V!'''
| class="fc-route3" |'''第２話: 血の狼煙 Scenario 2 - Beacon Fire of Blood'''
| class="fc-route4" |'''第２話: フラッシュ・デイ Scenario 2 - Flash Day'''

|-
|'''Victory Condition:''' Defeat all enemies; Defeat ZX-01 '''Defeat Condition:''' Any allied unit is defeated '''Skill Point:''' Defeat the 4 Zonders in 2 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*GaoGaiGar (Guy)
*J-Der (J, Tomoro)
*Great Mazinger (Tetsuya)
*Venus A (Jun)
*Boss Borot (Boss, Nuke, Mucha)
*Kotetsu Jeeg (Jeeg)
*Big Shooter (Miwa)

|'''Victory Condition:''' (1) Defeat all enemies, (2) Defeat Dangel '''Defeat Condition:''' (1) Hyouma defeated (2) Any Allied Unit is defeated '''Skill Point:''' Defeat all enemies in 3 turns, do not lose any Federation Army squads '''Secret Requirements:''' '''Unit Acquisition:'''
*Combattler V (Hyoma, Juzo, Daisaku, Chizuru, Kosuke)
*Jegan (Federation Soldier) x 3

|'''Victory Condition:''' (1) Defeat the Magellan Kai-class Battleship (2) Defeat the Magellan Kai-class Battleship and Nuclear Missiles '''Defeat Condition:''' (1) Any ally unit is defeated (2) Nuclear Missiles reach the marked area on the map '''Skill Point:''' Defeat the enemy missiles and battleship in 7 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Clop-class (Federation Captain)
*Wildfalken (Seolla)
*MP Nu Gundam (Cobray)
*ZZ Gundam (Judau)
*Re-GZ BWS (Roux)
*Albion (Synapse, Paserov)
*GP03 Dendrobium (Kou)
*GM Cannon II (Keith)
*GM Custom (Burning)
*GM Custom (Bate)
*GM Custom (Monsha)
*GM Cannon II (Adel)
*Zeta Gundam (Kamille)
*Re-GZ BWS (Four)
*Methuss (Fa)
*Super Gundam (Emma)
*Armed Fortress Orchis parts for Gundam Stamen
*G Defensor Parts for Gundam Mk-II

|'''Victory Condition:''' Defeat any enemy battleship '''Defeat Condition:''' (1) Allied battleship is defeated; (2) Allied battleship is defeated, Selena is defeated '''Skill Point:''' Defeat the enemy battleship in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*ZZ Gundam (Judau)
*Re-GZ BWS (Roux)
*Nu Gundam (Amuro)
*Ra Cailum (Bright)
*Jegan (Katz)
*MP Nu Gundam (Keyra)
*AS Soleares (Selena, Elma)
*Incom & Funnel parts for MP Nu Gundam

|-
| colspan="4" class="fc-std-sc" |'''第３話: 逆襲！機界31原種 Scenario 3 - Counterattack! The 31 Machine Primevals!'''

|-
| colspan="4" |'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' (1) Ally battleship is defeated, One of the Machine Primevals reaches the edge of the map; (2) Ally battleship is defeated, One of the Machine Primevals reaches the edge of the map, J is defeated '''Skill Point:''' Defeat all enemies in 6 turns '''Secret Requirements:''' '''Unit Acquisition (Touma & Kusuha):'''
*J-Ark (J, Tomoro)
*Nu Gundam (Amuro)
*Ra Cailum (Bright, Torres)
*Jegan (Katz)
*MP Nu Gundam (Keyra)
*Albion (Synapse, Paserov)
*GP03 Dendrobium (Kou)
*GM Cannon II (Keith)
*GM Custom (Burning)
*GM Custom (Bate)
*GM Custom (Monsha)
*GM Cannon II (Adel)
*Zeta Gundam (Kamille)
*Re-GZ BWS (Four)
*Methuss (Fa)
*Super Gundam (Emma)
*Incom & Funnel parts for MP Nu Gundam
*Armed Fortress Orchis parts for Gundam Stamen
*G Defensor Parts for Gundam Mk-II
'''Unit Acquisition (Cobray & Selena):'''
*J-Ark (J, Tomoro)
*Mazinkaiser (Kouji)
*Diana A (Sayaka)
*Great Mazinger (Tetsuya)
*Venus A (Jun)
*Combattler V (Hyoma, Juzo, Daisaku, Chizuru, Kosuke)
*Koutetsu Jeeg (Jeeg)
*Big Shooter (Miwa)
*Shin Getter (Ryoma, Hayato, Benkei)
*Lady Command (Michiru)

|-
| colspan="4" class="fc-std-sc" |'''第４話：地獄門、開く Scenario 4 - The Gates of Hell Open'''

|-
| colspan="4" |'''Victory Condition:'''
*1st Part: Allied Battleship reaches the escape point in 5 turns, All Enemies are defeated in 5 turns
*2nd Part: Defeat all enemies
'''Defeat Condition:'''
*1st Part: Allied Battleship is defeated, Turn 6 starts
*2nd Part: SRX is defeated
'''Skill Point:''' Defeat all enemies in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*SRX (Damaged) (Ryuusei, Rai, Aya)

|-
| colspan="4" class="fc-std-sc" |'''第５話: 地球圏絶対防御線 Scenario 5 - The Earth Sphere’s Absolute Defense Line'''

|-
| colspan="4" |'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' (1) Ally battleship is defeated (2) Any allied unit is defeated '''Skill Point:''' Clear the stage in 6 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Mobieus Zero (Mwu)
*All Char's Counter Attack, Stardust Memory, and Zeta Gundam units are lost <ul><li>Nu Gundam(Amuro)</li><li>Ra Cailum (Bright, Torres)</li><li>MP Nu Gundam (Keyra)</li><li>Albion (Synapse, Paserov)</li><li>GP03 Dendrobium (Kou)</li><li>GM Cannon II (Keith)</li><li>GM Custom (Burning)</li><li>GM Custom (Bate)</li><li>GM Custom (Monsha)</li><li>GM Cannon II (Adel)</li><li>Zeta Gundam (Kamille)</li><li>Re-GZ BWS (Four)</li><li>Methuss (Fa)</li><li>Super Gundam (Emma)</li><li>Jegan (Katz)</li></ul>

|- class="fc-route-h"
|'''Touma Route''' Great Mazinger, Venus A, Boss Borot Steel Jeeg, Big Shooter
|'''Kusuha Route''' Getter Robo G, Lady Command Mazinger Z, Diana A Combattler V
|'''Cobray Route''' ZZ Gundam, ReGZ (BWS) Mobieus Zero
|'''Selena Route'''
|-
| class="fc-route1" |'''第６話：平和、遥か遠く Scenario 6 - A Faraway Peace'''
| class="fc-route2" |'''第６話：北米戦線、異常アリ Scenario 6 - Abnormalities on the North American Front'''
| class="fc-route3" |'''第６話：GUNDAM出撃 Scenario 6 - Gundam, Sortie'''
| class="fc-route4" |'''第６話：ザ・ビギニング Scenario 6 - The Beginning'''

|-
|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Any ally is defeated '''Skill Point:''' Defeat all enemies in 5 turns; Defeat the Yamata no Orochi last '''Secret Requirements:''' '''Unit Acquisition:'''
*GaiGar (Gai)
*Mic Sounders XIII (Mic Sounders XIII)

|'''Victory Condition:''' (1) Ally reaches the designated area; (2) Defeat all enemies '''Defeat Condition:''' Any ally defeated '''Skill Point:''' Reach target location without engaging in combat '''Secret Requirements:''' '''Unit Acquisition:'''
*Mazinkaiser → Mazinger Z (Kouji)
*Shin Getter Robo → Getter Robo G (Ryoma, Hayato, Benkei) 
*Dancouga (Shinobu, Sara, Masato, Ryo)

|'''Victory Condition:'''
*1st Part: Sigu is defeated, Vesalius is defeated
*2nd Part: Defeat all enemies 
'''Defeat Condition:'''
*1st Part: Any ally is defeated
*2nd Part: Any ally is defeated 
'''Skill Point:''' Accomplish either objective in 4 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Clop Class Battleship (Federation Officer)
*Wing Gundam Zero Kai (Heero)
*Gundam Deathscythe Hell Kai (Duo)
*Gundam Sandrock Kai (Quatre)
*Taurus (Hilde)
*Strike Gundam (Kira)

|'''Victory Condition:''' (1) AS Soleares reaches the designated point in 4 turns; (2) Defeat all enemies '''Defeat Condition:''' (1) Begin turn 5 without meeting victory conditions, Any ally is defeated; (2) Any ally is defeated '''Skill Point:''' Defeat all enemies in 4 turns and get the AS Soleares to the target square '''Secret Requirements:''' '''Unit Acquisition:'''
*CGUE (Rau)
*GINN (ZAFT Soldier) x 2
*Vesarius (Ades)

|-
| class="fc-route1" |'''第７話：燃えろ宙！妖花フローラの挑戦 Scenario 7 - Space Burns! The Enchanting Flora’s Challenge!'''
| class="fc-route2" |'''第７話：怒りの獣、野生の咆哮 Scenario 7 - The Wild Roar of the Raging Beast'''
| class="fc-route3" |'''第７話：崩壊の大地 Scenario 7 - Collapsing Land'''
| class="fc-route4" |'''第７話：ワンズ・ジャスティス Scenario 7 - One’s Own Justice'''

|-
|'''Victory Condition:''' 
*1st Part: Defeat all enemies
*2nd Part: Defeat all enemies
'''Defeat Condition:''' 
*1st Part: Any ally defeated
*2nd Part: Any ally defeated
'''Skill Point:''' Defeat all enemies in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*AnRyu (AnRyu)
*KouRyu (KouRyu)

|'''Victory Condition:''' (1) Defeat all enemies; (2) Defeat Dangel '''Defeat Condition:''' Any ally is defeated '''Skill Point:''' Defeat all Zubanzas, Boazan Flying Saucers, and Red Baloms within 4 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Black Wing (Alan)

|'''Victory Condition:''' (1) Defeat all enemies; (2) Archangel reaches the designated point, Defeat all enemies '''Defeat Condition:''' (1) Mwu is defeated; (2) Ally battleship is defeated, Kira or Mwu are defeated '''Skill Point:''' Defeat all enemies in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Strike Gundam (Kira)
*Archangel (Murrue, Natarle)
*Aile, Sword and Launcher Striker packs for Strike Gundam

|'''Victory Condition:''' Any ally reaches the designated point '''Defeat Condition:''' Any ally is defeated '''Skill Point:''' Defeat all enemies in 5 turns and get an allied unit to the target square '''Secret Requirements:''' '''Unit Acquisition:'''
*Altron Gundam (Wufei)
*Gundam Heavyarms Kai (Trowa)
*CGuE (Rau)
*Vesarius (Ades)
*Aegis Gundam (Athrun)
*Blitz Gundam (Nicol)
*Buster Gundam (Dearka)
*Duel Gundam (Yzak)

|-
| class="fc-route1" |'''第８話：立ち上がれ！勇気ある者達 Scenario 8 - Stand Up, People of Courage!'''
| class="fc-route2" |'''第８話：輝け！不死身の勇者 Scenario 8 - Shine, Undying Hero!'''
| class="fc-route3" |'''第８話：誘う声 Scenario 8 - An Inviting Voice'''
| class="fc-route4" |'''第８話：インビジブル・イントルーダー Scenario 8 - Invisible Intruder'''

|-
|'''Victory Condition:''' (1) Defeat all enemies; (2) ZX-02 is defeated '''Defeat Condition:''' (1) Any ally is defeated; (2) Gai is defeated, J is defeated '''Skill Point:''' Defeat all enemies in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*GaiGar → GaoGaiGar
*Mic Sounders XIII gains "Disc P", "Disc M", and "Disc X" attacks
*Goldymarg (Goldymarg)
*HyoRyu (HyoRyu)
*EnRyu (EnRyu)
*Big Volfogg (Big Volfogg)

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' (1) Any ally is defeated; (2) Akira is defeated '''Skill Point:''' Defeat the Bramble (retreats at 4000HP (E) / 6000HP (N) / 8000HP (H)) '''Secret Requirements:''' '''Unit Acquisition:'''
*Raideen (Akira)
*Bluegar (Jinguji, Mari)

|'''Victory Condition:'''
*1st Part: (1) Vesalius is defeated; (2) Defeat all enemies
*2nd Part: (1) Defeat all enemies; (2) Defeat all enemies except Valk Baal 
'''Defeat Condition:'''
*1st Part: Ally battleship is defeated, Seolla or Cobray are defeated
*2nd Part: Any ally is defeated 
'''Skill Point:''' Defeat Aegis, Duel, Buster, and Blitz Gundams in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Zeta Gundam (Kamille)
*Re-GZ BWS (Four)
*Methuss (Fa)
*Super Gundam (Emma)
*Ra Cailum (Bright, Torres)
*MP Nu Gundam (Cobray)
*Werkbau (Cobray)
*G Defensor parts for Gundam Mk-II

|'''Victory Condition:''' Reach turn 6 '''Defeat Condition:''' Any ally is defeated '''Skill Point:''' Defeat all the Jegans '''Secret Requirements:''' '''Unit Acquisition:'''
*CGuE (Rau)
*Vesarius (Ades)
*Aegis Gundam (Athrun)
*Blitz Gundam (Nicol)
*Buster Gundam (Dearka)
*Duel Gundam (Yzak)

|-
| class="fc-route1" |'''第９話：内なる修羅 Scenario 9 - Demons of War Within'''
| class="fc-route2" |'''第９話：再会！ニューヨーク解放戦 Scenario 9 - Reunion! The Battle to Retake New York'''
| class="fc-route3" |'''第９話：正義の在処 Scenario 9 - Where Justice Can Be Found'''
| class="fc-route4" |'''第９話：アベンジャー Scenario 9 - Avenger'''

|-
|'''Victory Condition:''' (1) Defeat all enemies; (2) Defeat Raioh '''Defeat Condition:''' (1) Any ally defeated; (2) Sanger is defeated '''Skill Point:''' Defeat the Bramble in 4 turns (retreats at 4000HP (E) / 6000HP (N) / 8000HP (H)) '''Secret Requirements:''' '''Unit Acquisition:'''
*Dygenguar (Sanger)
*Huckebein Mk-III Trombe (Ratsel)
*Raideen (Akira)
*Bluegar (Jingunji, Mari)
*Mazinger Z (Kouji)
**Mazinger Z (Kouji) and Great Mazinger (Tetsuya) gain the "Double Mazinger Blade" and "Double Burning Fire" combination attacks
*Diana A (Sayaka)
*Getter Robo G (Ryoma, Hayato, Benkei)
*Lady Command (Michiru)
*Combattler V (Hyoma, Juzo, Daisaku, Chizuru, Kosuke)

|'''Victory Condition:''' (1) Defeat all enemies; (2) Dancouga reaches the designated point; (3) Defeated Deathgaia, Dangel, and Warchamedes '''Defeat Condition:''' (1) Shinobu, Kusuha, or Bullet are defeated; (2) Shinobu, Kusuha, Bullet, or Alan are defeated; (3) Alan is defeated '''Skill Point:''' Clear the map in 8 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Black Wing (Alan)
*Dygenguar (Sanger)
*Huckebein Mk-III Trombe (Ratsel)

|'''Victory Condition:''' (1) Vesalius is defeated; Reduce the Muge Battleship under 2000 HP before it reaches the edge of the map '''Defeat Condition:''' (1) Ally battleship is defeated; (2) Muge Battleship reaches the western edge of the map '''Skill Point:''' Defeat all enemies before reducing the Muge Mothership's HP below 2000 or defeating it '''Secret Requirements:''' '''Unit Acquisition:'''

|'''Victory Condition:''' (1) Reduce the Archangel's HP to 50% or less, Defeat all enemies besides the Archangel; (2) Reduce the Varuch Ishar to 4000 HP or less. '''Defeat Condition:''' Any ally is defeated '''Skill Point:''' Defeat the Varuch Ishar (flees at 4000 HP) '''Secret Requirements:''' '''Unit Acquisition:'''
*CGuE (Rau)
*Vesarius (Ades)
*Aegis Gundam (Athrun)
*Blitz Gundam (Nicol)
*Buster Gundam (Dearka)
*Duel Gundam (Yzak)

|-
| class="fc-route1" |'''第１０話：激震の地底帝国 Scenario 10 - Tremors in the Underground Empire'''
| class="fc-route2" |'''第１０話：龍を喰らうもの Scenario 10 - That Which Devours the Dragon'''
| class="fc-route3" |'''第１０話：消えていく光 Scenario 10 - The Fading Light'''
| class="fc-route4" |'''第１０話：グッバイ・フレンズ Scenario 10 - Goodbye, Friends'''

|-
|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' All allies defeated, Science Fortress Lab destroyed '''Skill Point:''' Clear the map without the Science Fortress Lab taking damage '''Secret Requirements:''' '''Unit Acquisition:'''
*Raioh loses the "System LIOH" ability
*Raioh gains the "Rising Meteor" attack
*Dygenguar (Sanger)
*Huckebein Mk-III Trombe (Ratsel)

|'''Victory Condition:''' (1) Sanger is defeated; (2)(3) Defeat all enemies; (4)(5) ZX-02 is defeated '''Defeat Condition:''' (1) Bullet is defeated; (2) Sanger or Rastel are defeated; (3) Any ally is defeated; (4) Guy, Sanger, or Rastel are defeated; (5) Guy, J, Sanger, or Rastel are defeated '''Skill Point:''' Reduce Shin RyuOuKi to below 10000 HP within 3 turns of its arrival '''Secret Requirements:''' '''Unit Acquisition:'''
*Dygenguar (Sanger)
*Huckebein Mk-III Trombe (Ratsel)
*GaiGar (Guy)
*GaoGaiGar (Guy)
*Mic Sounders XIII (Mic Sounders XIII)
*Goldymarg (Goldymarg)
*HyoRyu (HyoRyu)
*EnRyu (Enryu)
*Volfogg (Volfogg)
*Great Mazinger (Tetsuya)
*Venus A (Jun)
*Boss Borot (Boss, Mucha, Nuke)
*Kotetsu Jeeg (Jeeg)
*Big Shooter (Miwa)
*Stealth Gao II parts for GaoGaiGar
*Gunbot parts for Volfogg

|'''Victory Condition:''' (1) Reduce the Blitz Gundam to under 7000HP; (2) The Gamow is defeated; (3) The Gamow is defeated and Imperial Guard are defeated '''Defeat Condition:''' (1)(2) Any ally is defeated; (3) Ally battleship is defeated '''Skill Point:''' Defeat the Gamow (retreats at 4000HP (E) / 6000HP (N) / 8000HP (H)) '''Secret Requirements:''' '''Unit Acquisition:'''
*Qubeley Mk-II (Puru)
*Qubeley Mk-II (Puru Two)
*Hyaku Shiki (Beecha)
*Gundam Mk-II (Elle)
*Jegan (Mondo)
*Megarider (Iino)
*YF-19 (Isamu)
*YF-21 (Guld)

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' (1) Any ally is defeated; (2) Ally battleship is defeated; (3) Ally battleship is defeated, Isamu or Guld are defeated '''Skill Point:''' Clear the map in 6 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Zeta Gundam (Kamille)
*Methuss (Fa)
*ReGZ (Four)
*Super Gundam (Emma)
*Mobius Zero (Mwu)
*Wing Gundam Zero Kai (Heero)
*Gundam Sandrock Kai (Quatre)
*Gundam Deathscythe Hell Kai (Duo)
*Taurus (Hilde)
*ZZ Gundam (Judau)
*ReGZ BWS (Roux)
*Qubeley Mk-II (Puru)
*Qubeley Mk-II (Puru Two)
*Hyaku Shiki (Beecha)
*Gundam Mk-II (Elle)
*Jegan (Mondo)
*Megarider (Iino)
*YF-19 (Isamu)
*YF-21 (Guld)

|-
| class="fc-route1" |'''第１１話：戦場の邂合、そして決別 Scenario 11 - An Battlefield Encounter, and Then a Departure'''
| class="fc-route2" |'''第１１話：新たなる人類 Scenario 11 - A New Mankind'''
| class="fc-route3" |'''第１１話：君と戦場で Scenario 11 - On the Battlefield with You'''
| class="fc-route4" |'''第１１話：パワー・ジャンクション Scenario 11 - Power Junction'''

|-
|'''Victory Condition:''' (1) Defeat all enemies; (2) Defeat Vesalius '''Defeat Condition:''' Ally battleship is defeated, Kira or Mwu are defeated '''Skill Point:''' Defeat all enemies in 7 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Archangel (Murrue)
*Strike Gundam (Kira)
*Moebius Zero (Mwu)
*Stealth Gao II Parts for GaoGaiGar
*Aile, Sword, and Launcher Striker packs for Strike Gundam

|'''Victory Condition:''' (1) Defeat all enemies; (2) Vesalius is defeated '''Defeat Condition:''' (1) Ally battleship is defeated, Kira or Mwu are defeated; (2) Ally battleship is defeated '''Skill Point:''' Defeat all enemies in 7 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Strike Gundam (Kira)
*Mobeius Zero (Mwu)
*Archangel (Murrue, Natarle)
*YF-19 (Isamu)
*YF-21 (Guld)
*Aile, Sword, and Launcher Striker packs for Strike Gundam

|'''Victory Condition:''' (1) Defeat all enemies (2) ZX-02 is defeated '''Defeat Condition:''' (1) Kira is defeated; (2) Any ally is defeated '''Skill Point:''' Defeat all enemies in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Wildburger (Arado)
*Great Mazinger (Tetsuya)
*Venus A (Jun)
*Boss Borot (Boss)
*Dancouga (Shinobu, Sarah, Masato, Ryo)
*Raideen (Akira)
*Bluegar (Jingunji)
*Mazinger Z (Kouji)
*Diana A (Sayaka)
*Getter Robo G (Ryoma, Hayato, Benkei)
*Lady Command (Michiru)
*Star Gaogaigar (Gai)
*Goldymarg (Goldymarg)
*Mic Sounders the 13th (Mic)
*Hyoryu (Hyoryu)
*Enryu (Enryu
*Big Volfogg (Volfogg)

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Defeat all enemies in 7 turns '''Secret Requirements:''' '''Unit Acquisition:'''

|-
| class="fc-route1" |'''第１２話：守るべきモノ Scenario 12 - What You Must Protect'''
| class="fc-route2" |'''第１２話：別れの宇宙 Scenario 12 - Farewells in Space'''
| class="fc-route3" |'''第１２話：ディーンの火 Scenario 12 - The Flames of Deen'''
| class="fc-route4" |'''第１２話：コンクルージョン Scenario 12 - Conclusion'''

|-
|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' All enemies defeated '''Skill Point:''' Defeat all enemies in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Gundam Wing Zero (Heero)
*Gundam Deathscythe Hell Kai (Duo)
*Gundam Sandrock Kai (Quatre)
*Gundam Heavyarms Kai (Trowa)
*Altron Gundam (Wufei)
*Taurus (Hilde)
*Zeta Gundam (Kamille)
*Re-GZ BWS (Four)
*Methuss (Fa)
*Gundam Mk-II (Emma)
*ZZ Gundam (Judau)
*Qubeley Mk-II (Puru)
*Qubeley Mk-II (Puru Two)
*Hyaku Shiki (Beecha)
*Gundam Mk-II (Elle)
*Jegan (Mondo)
*Megarider (Iino)
*YF-19 (Isamu) (After stage)
*YF-21 (Guld) (After stage)
*G Defensor parts for Gundam Mk-II

|'''Victory Condition:''' (1) Defeat all enemies; (2) Defeat Shin RyoOhKi; (3) Defeat the Imperial Guard '''Defeat Condition:''' (1)(2) Any ally is defeated; (3) Ally battleship is defeated '''Skill Point:''' Defeat Shin RyuOhKi before Victory Conditions are met '''Secret Requirements:''' '''Unit Acquisition:'''
*Gundam Wing Zero Kai (Heero)
*Gundam Deathscythe Hell Kai (Duo)
*Gundam Sandrock Kai (Quatre)
*Gundam Heavyarms Kai (Trowa)
*Altron Gundam (Wufei)
*Taurus (Hilde)
*Zeta Gundam (Kamille)
*Re-GZ BWS (Four)
*Methuss (Fa)
*Gundam Mk-II (Emma)
*ZZ Gundam (Judau)
*Qubeley Mk-II (Puru)
*Qubeley Mk-II (Puru Two)
*Hyaku Shiki (Beecha)
*Gundam Mk-II (Elle)
*Jegan (Mondo)
*Megarider (Iino)
*G Defensor parts for Gundam Mk-II

|'''Victory Condition:''' (1) Bramble, Magnum, and Zangaioh are defeated; (2) Defeat all enemies; (3) Defeat Valk Baal '''Defeat Condition:''' (1) Ally battleship is defeated, Arado is defeated; (2) Cobray, Arado or Seolla are defeated; (3) Cobray, Viletta, Sanger, or Rastel are defeated '''Skill Point:''' Clear the map in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Werkbau gains the "Axion Buster" attack
*Gundam Heavyarms Kai (Trowa)
*Altron Gundam (Wufei)
*Dygenguar (Sanger)
*Huckebein Mk-III Trombe (Ratsel)
*R-GUN Powered (Viletta)

|'''Victory Condition:''' (1)(2) ZX-08 is defeated; (3) Varuch Ishar is defeated '''Defeat Condition:''' (1) Ally battleship is defeated, (2) Ally battleship is defeated, J is defeated; (3) Ally battleships is defeated, Selena, Viletta, Sanger, or Rastel are defeated '''Skill Point:''' Defeat ZX-02 in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*J-ARK (J, Tomoro)
*R-GUN Powered (Viletta)
*Dygenguar (Sanger)
*Huckebein Mk-III Trombe (Ratsel)
*Vegalion (Slay)

|-
| colspan="4" class="fc-std-sc" |'''第１３話：もう一度、自らの足で Scenario 13 - Once Again, On Your Feet'''

|-
| colspan="4" |'''Victory Condition:''' ZX-06 is defeated '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Clear the map in 6 turns; Defeat all other enemies before ZX-06 '''Secret Requirements:''' '''Unit Acquisition:'''
*Evangelion Unit 0 Custom (Rei)
*Evangelion Unit 1 (Shinji)
*Evangelion Unit 2 (Asuka)

|-
| colspan="4" class="fc-std-sc" |'''第１４話：オペレーション・ハルパー Scenario 14 - Operation Harper'''

|-
| colspan="4" |'''Victory Condition:''' Reduce Hermoz Ehad's HP to below 120000HP (E) / 90000HP (N) / 80000HP (H) '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Achieve the victory condition in 7 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*HyoRyu (HyoRyu)
*EnRyu (EnRyu)

|-
| colspan="4" class="fc-std-sc" |'''第１５話：遥かなる凱歌 Scenario 15 - A Faroff Victory Song'''

|-
| colspan="4" |'''Victory Condition:''' Defeat the Combine Primeval '''Defeat Condition:''' Ally Battleship is defeated, J is defeated '''Skill Point:''' Defeat all enemies in 7 turns, leaving the combined Primeval for last '''Secret Requirements:''' '''Unit Acquisition:'''
*J-Ark (J, Tomoro)
*ALL units are unavailable until clearing Scenario 18

|-
| colspan="4" class="fc-std-sc" |'''第１６話：導かれる魂、銀河で Scenario 16 - Souls Guided by the Galaxy'''

|-
| colspan="4" |'''Victory Condition:'''
*1st Part: Defeat all enemies
*2nd Part: Defeat all enemies
'''Defeat Condition:'''
*1st Part: Ideon is defeated
*2nd Part: Any ally is defeated
'''Skill Point:''' Defeat all enemies in 4 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Ideon (Cosmo, Kasha, Bess → Moera)
*VF-17S Nightmare (Kinryu)
*VF-17D Nightmare (Gamlin)
*VF-17D Nightmare (Docker)
*Battle 7 (Max, Exedore, Miho, Sally)
*Soloship (Bess)

|-
| colspan="4" class="fc-std-sc" |'''第１７話：ディスコード・ハーモニー Scenario 17 - Discord / Harmony'''

|-
| colspan="4" |'''Victory Condition:''' (1)(2) Defeat the Zig Mac; (3) Defeat FZ-109F Elgarthorn '''Defeat Condition:''' (1) Any ally is defeated; (2) Any ally is defeated, Zig Mac moves next to the Soloship (3) '''Skill Point:''' Meet victory the condition in 4 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Battle 7 can now transform into "Enhanced Attack Mode"
*VF-17D Nightmare (Docker)

|-
| colspan="4" class="fc-std-sc" |'''第１８話：銀河流浪 Scenario 18 - Galactic Wandering'''

|-
| colspan="4" |'''Victory Condition:'''
*1st Part: Defeat FZ-109F Elgarthorn
*2nd Part: Defeat Zig Mac
'''Defeat Condition:'''
*1st Part: Any ally is defeated
*2nd Part: Any ally is defeated
'''Skill Point:''' Meet victory conditions in 3 turns '''Secret Requirements:'''
*Duel Gundam
**Take the Earth Route
*VF-1J S Valkyrie
**Take the Earth Route
*LaGOWE
**Take the Earth Route
'''Unit Acquisition:'''
*VF-17D Nightmare (Physica)
*VF-17S (Kinryu), VF-17D (Gamlin), and VF-17D (Physica) gain the "Diamond Force Attack" combination Attack
*Ideon gains the "Omnidirectional Missile" attack
*All Ideon and Macross 7 units are lost <ul><li>Ideon (Cosmo, Kasha, Moera)</li><li>Soloship (Bess)</li><li>Battle 7 (Max, Exedore, Miho, Sally)</li><li>VF-17S Nightmare (Kinryu)</li><li>VF-17D Nightmare (Physica)</li><li>VF-17D Nightmare (Gamlin)</li>

|}
 

==Stages 19 - 33==
{| width="100%"
|- class="fc-route-h"
| width="50%" |'''Descend to Earth''' Gundam 0083 Gundam Z ZZ Gundam Char's CounterAttack Gundam Wing Gundam SEED Macross 7 Macross Plus Evangelion
| width="50%" |'''Mount a Lunar offensive''' GaoGaiGar Ideon Mazinger (Z, Great) Getter Robo Steel Jeeg Combattler V Gaiking Raideen Dancouga GoShogun

|-
| class="fc-route1" |'''第１９話：宇宙に降る星 Scenario 19 - Stars Falling in Space'''
| class="fc-route3" |'''第１９話：悪夢への招待状 Scenario 19 - A Written Invitation to a Nightmare'''

|-
|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated, Kira is defeated '''Skill Point:''' Destroy all enemies in 6 turns '''Secret Requirements:'''
*Duel Gundam
**Destroy Yzak.
'''Unit Acquisition:'''
*Nu Gundam (Amuro)
*Jegan (Katz)
*MP Nu Gundam (Kayra)
*Incom and Fin Funnel parts for MP Nu Gundam
*Kira unlocks the SEED pilot skill
*Skygrasper
*Ra Cailum (Bright, Torres)

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Destroy the Muge battleship in 6 turns (retreats at 6000HP (E) / 8000HP (N) / 10000 HP (H)) '''Secret Requirements:''' 
'''Unit Acquisition:'''
*Daiku Maryu (Pete, Midori)
*Gaiking (Sanshiro)
*Skylar (Fan Li)
*Bazolar (Yamagatake)
*Nesser (Bunta)

|-
| class="fc-route1" |'''第２０話：強襲、砂漠の虎 Scenario 20 - Assault of the Desert Tiger'''
| class="fc-route3" |'''第２０話：異邦人達の帰還 Scenario 20 - The Foreigners Return'''

|-
|'''Victory Condition:''' Defeat the Lesseps '''Defeat Condition:''' Ally battleship is defeated, Kira is defeated '''Skill Point:''' Defeat the Lesseps in 6 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Kira unlocks the SEED pilot skill
*Albion (Synapse, Paserov)
*Gundam Stamen (Kou)
*GM Cannon II (Keith)
*GM Custom (Burning)
*GM Custom (Bate)
*GM Custom (Monsha)
*GM Cannon II (Adel)
*Gundam GP01fb
*Armed Base Orchis parts for Gundam Stamen

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Destroy Helmut's Muge battleship in 4 turns (retreats at 6000HP (E) / 8000HP (N) / 10000 HP(H)) '''Secret Requirements:''' '''Unit Acquisition:'''
*Ideon (Cosmo, Kasha, Moera)
*Ideon gains the "Ideon Sword" and "Ideon Sword (MAP)" attacks
*Soloship (Bess, Hatari)

|-
| class="fc-route1" |'''第２１話：プリティ・デビル Scenario 21 - Pretty Devil'''
| class="fc-route3" |'''第２１話：裏切りの代償 Scenario 21 - The Cost of Betrayal'''

|-
|'''Victory Condition:'''
*1st Part: Gigil's ship is defeated
*2nd Part: Gigil's ship is defeated 
'''Defeat Condition:'''
*1st Part: Any ally is defeated
*2nd Part: Basara is defeated
'''Skill Point:''' Destroy Gigil before he moves adjacent to Sivil '''Secret Requirements:'''
*LaGOWE
**Waltfeld and Dacosta must both survive and get a combined total of 10 kills or more on the first half of the scenario.
*VF-1J
**Milia must get a total of 10 kills in the first half of the scenario.
'''Unit Acquisition:'''
*VF-17S Nightmare (Kinryu)
*VF-17D Nightmare (Gamlin)
*VF-17D Nightmare (Physica)
*VF-1J S Valkyrie (Milia)
*LaGOWE (Waldfelt)
*BuCUE (Dacosta)
*Skygrasper (Cagalli)
*VF-19 Kai Fire Valkyrie (Basara)
*VF-17S Nighmare (Milia)
*VF-1J S Valkyrie

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Any ally is defeated '''Skill Point:''' Destroy all enemies in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Goshogun (Shingo, Killy, Remi)
*Good Thunder (Sabranth)

|-
| class="fc-route1" |'''第２２話：砂塵の果て Scenario 22 - Beyond the Clouds of Sand'''
| class="fc-route3" |'''第２２話：発動する力、無限大 Scenario 22 - Infinite Activation Power'''

|-
|'''Victory Condition:''' (1) Defeat the Lesseps; (2) Waltfeld is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated '''Skill Point:''' Defeat the Lesseps in 5 turns '''Secret Requirements:'''
*LaGOWE
**Kira must destroy Waltfeld's LaGOWE while in SEED. (Kira has to activate SEED mode before the event that ends the stage.)
'''Unit Acquisition:'''
*Kira unlocks the SEED pilot skill

|'''Victory Condition:''' (1) Soloship reaches the computer facility; (2) Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Get the Soloship to the indicated area in 4 turns without it taking any damage '''Secret Requirements:''' '''Unit Acquisition:'''
*HyoRyu (HyoRyu)
*EnRyu (EnRyu)

|-
| class="fc-route1" |'''第２３話：エモーション・ハイ Scenario 23 - Emotion High'''
| class="fc-route3" |'''第２３話：決戦！地獄の月荒野 Scenario 23 - Decisive Battle in the Hellish Lunar Wilderness!'''

|-
|'''Victory Condition:''' (1) Defeat 2 Ghosts; (2) Defeat all enemies; (3) Basara sings to Sivil, All ZAFT forces are defeated '''Defeat Condition:''' (1) Ally battleship is defeated, Battle 7 is defeated; (2) Ally battleship is defeated, Battle 7 is defeated, Isamu or Guld are defeated; (3) Ally battleship is defeated, Isamu, Guld, or Basara are defeated '''Skill Point:''' Clear the map in 9 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*YF-19's "Full Volley" attacks gains +200 Attack power
*YF-19 and YF-21 gain the "Double Pinpoint Barrier Punch" combination attack
*Battle 7 (Max, Exedore, Miho, Sally)
*VF-19 Kai Fire Valkyrie (Basara)
*Mazinkaiser
*Shin Getter Robo

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Clear the map in 9 turns '''Secret Requirements:''' '''Unit Acquisition:'''

|-
| colspan="2" class="fc-std-sc" |'''第２４話：戦神の星で Scenario 24 - On the Planet of the War God'''

|-
| colspan="2" |'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' (1) Any ally is defeated; (2) Ally battleship is defeated '''Skill Point:''' Destroy all enemies in 3 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*VF-19 Kai Fire Valkyrie (Basara)
*VF-11 MAXL Kai (Mylene)
*VF-17 Kai Nightmare (Ray, Veffidas)
*Tallgeese III (Zechs)
*Taurus (Noin)
*Voltes V (Kenichi, Ippei, Daijiroh, Hiyoshi, Megumi)
*Daimos (Kazuya)
*Garuba FX-II (Kyoshiro, Nana)

|-
| colspan="2" class="fc-std-sc" |'''第２５話：選ばれし者、選びし者 Scenario 25 - Those Who Are Chosen, Those Who Choose'''

|-
| colspan="2" |'''Victory Condition:''' (1) Hermos is defeated; (2) Zifrud is defeated '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Clear the map in 8 turns '''Secret Requirements:''' '''Unit Acquisition:'''

|-
| colspan="2" class="fc-std-sc" |'''第２６話：かりそめの旅人 Scenario 26 - Transitory Traveler'''

|-
| colspan="2" |'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated, Temjin, Fei Yen, or Apharmd are defeated '''Skill Point:''' Destroy all enemies in 3 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Temjin 747J (Chief)
*Fei Yen the Knight (Fei)
*Apharmd The Hatter (The Hatter)

|-
| colspan="2" class="fc-std-sc" |'''第２７話：勇気ある者達の誓い Scenario 27 - The Oath of the Courageous'''

|-
| colspan="2" |'''Victory Condition:'''
*1st Part: Defeat all enemies
*2nd Part: (1) Defeat all enemies; (2) Defeat the Z-Master within (10 (E) / 7 (N) / 5 (H)) turns 
'''Defeat Condition:'''
*1st Part: Ally battleship is defeated, Gai is defeated
*2nd Part: (1) Ally battleship is defeated, Gai or J are defeated; (2) (10 (E) / 7 (N) / 5 (H)) turns have passed, Ally battleship is defeated, Gai or J are defeated 
'''Skill Point:''' Destroy all enemies in 7 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*J-Ark (J, Tomoro)

|-
| colspan="2" class="fc-std-sc" |'''第２８話：いつか星の海へ Scenario 28 - Someday, In the Sea of Stars'''

|-
| colspan="2" |'''Victory Condition:''' (1)(2) Defeat the Zonder Robo; (3) Defeat the Zonder Robo within 6 attacks from Star GaoGaiGar; (4)(5) Defeat all enemies '''Defeat Condition:''' (1) Galeon is defeated; (2) Ally battleship is defeated, Galeon is defeated; (3) Ally battleship or Gai are defeated, Zonder Robo is not defeated within 6 attacks from Star GaoGaiGar (4) Main Character is defeated; (5) Ally battleship is defeated '''Skill Point:''' Destroy the Zonuder Robo in 5 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Galeon (Galeon)
*Star GaoGaiGar/GaoGaiGar (Gai)
*YF-19 (Isamu)
*YF-21 (Guld)
*Battle 7 (Max)
*VF-17S Nightmare (Milia)
*VF-17D Nightmare (Gamlin)
*VF-17D Nightmare (Physica)
*VF-19 Kai Fire Valkyrie (Basara)
*VF-11 MAXL Kai (Mylene)
*VF-17 Kai Nightmare (Ray, Veffidas)
*HyoRyu (HyoRyu)
*EnRyu (EnRyu)
*Goldymarg (Goldymarg)
*Volfogg (Volfogg)
*Mic Sounders XIII (Mic Sounder XIII)
*Ideon (Cosmo, Kasha, Moera)
*Soloship (Bess, Hatari)
*Star GaoGaiGar (Guy, Choryujin, Goldymarg, Mic, Volfogg)
*Dygenguar (Sanger)
*Aussenseiter (Ratsel)
*R-Blade Custom (Ryusei)
*R-Gun Powered (Viletta)

|-
| colspan="2" class="fc-std-sc" |'''第２９話：押された烙印 Scenario 29 - Branded with the Mark'''

|-
| colspan="2" |'''Victory Condition:''' (1)(2) Defeat all enemies '''Defeat Condition:''' (1) Ally battleship is defeated; (2) Ally battleship is defeated, Cagalli is defeated '''Skill Point:''' Destroy all enemies in 6 turns '''Secret Requirements:'''
*Destroid Monster
**Take the Space Route
*FBz-99G
**Take the Space Route
*Strike Rouge IWSP
**Cagalli must have 30 or more kills by the end of this stage.
***Take the Alaska Route
*Duel Gundam
**Take the Alaska Route
'''Unit Acquisition:'''
*GaoFighGar (Guy)
*HyoRyu (HyoRyu)
*EnRyu (EnRyu)
*Goldymarg (Goldymarg)
*Volfogg (Volfogg)/Big Volfogg (Big Volfogg)
*Mic Sounders XIII (Mic Sounders XIII)
*AnRyu (AnRyu)
*KouRyu (KouRyu)
*Ra Cailum (Bright, Torres)

|- class="fc-route-h"
|'''Head to Alaska''' Gundam (0083, Z, ZZ, CCA, Wing, SEED) Daitarn 3 Mazinger (Z, Great) Steel Jeeg Voltes V Daimos Dancouga Evangelion
|'''Go to Space''' GaoGaiGar Ideon Getter Robo Combattler V GaiKing Raideen Goshogun Macross (DYRL, 7, Plus) Virtual On

|-
| class="fc-route2" |'''第３０話：終わらない閃光 Scenario 30 - Unending Flashes of Light'''
| class="fc-route4" |'''第３０話：ロスト・ディーヴァ Scenario 30 - Lost Diva'''

|-
|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated, Kira is defeated '''Skill Point:''' Clear the map in 7 turns '''Secret Requirements:'''
*Strike Rouge IWSP
**Mwu must defeat Dearka
**After the event, Kira must defeat Athrun while both are in SEED.
'''Unit Acquisition:'''
*Skygrasper (Cagalli)
*Strike Gundam (Kira)
*Kira unlocks the SEED pilot skill
*Cagalli unlocks the SEED pilot skill (needs verification)
*Archangel loses Natarle as a subpilot

|'''Victory Condition:''' (1)(2) Defeat all enemies '''Defeat Condition:''' (1) Any ally is defeated: (2) Ally battleship is defeated, Fire Bomber, Diamond Force, or Skull Squadron are defeated '''Skill Point:''' In 6 turns, destroy Glavil and Gavil. You must destroy Glavil before Gavil '''Secret Requirements:'''
*Gavil and FBz-99G Zaubergeran
**Gamlin must defeat Gavil
'''Unit Acquisition:'''
*YF-19 (Isamu) (Before Deploying)
*YF-21 (Guld) (Before Deploying)
*VF-1S S Valkyrie (Focker)
*VF-1S S Valkyrie (Hikaru)
*VF-1A S Valkyrie (Kakizaki)
*VF-17D Nightmare (Gamlin)
*VF-17D Nightmare (Physica)
*VF-19 Kai Fire Valkyrie (Basara)
*VF-11 MAXL Kai (Mylene)
*VF-17 Kai Nightmare (Ray, Veffidas)

|-
| class="fc-route2" |'''第３１話：青き清浄なる世界のために Scenario 31 - For Our Blue & Pure World'''
| class="fc-route4" |'''第３１話：禁断の惑星へ Scenario 31 - To the Forbidden Planet'''

|-
|'''Victory Condition:''' (1) Defeat all enemies; (2)(3) Defeat all Mobile Dolls, All ZAFT Units retreat '''Defeat Condition:''' (1)(2) Ally battleship is defeated, Heero is defeated; (3) Ally battleship is defeated '''Skill Point:''' Do not let a single ZAFT machine get shot down '''Secret Requirements:'''
*Duel Gundam
**Yzak must survive the scenario.
'''Unit Acquisition:'''
*Archangel gains Newman as a subpilot
*Freedom Gundam (Kira)
*Daitarn 3 (Banjo)
*Black Wing (Alan)

|'''Victory Condition:'''
*1st Part: Defeat all enemies
*2nd Part: Defeat Gepelnitch
'''Defeat Condition:'''
*1st Part: Any ally is defeated
*2nd Part: Ally battleship is defeated, Basara or Gamlin are defeated
'''Skill Point:''' In 7 turns, destroy Glavil and Gavil and make Gepelnitch's ship retreat (at 50,000 HP) '''Secret Requirements:'''
*Destroid Monster
**Get the Skill Point on this stage.
*Gavil and FBz-99G Zaubergeran
**Gamlin must defeat Gavil 
'''Unit Acquisition:'''
*Destroid Monster

|-
| class="fc-route2" |'''第３２話：守護神の巫女 Scenario 32 - Priestess of the Guardian God'''
| class="fc-route4" |'''第３２話：インフィニティ・ソウル Scenario 32 - Infinity Soul'''

|-
|'''Victory Condition:''' (1)(2) Defeat all enemies '''Defeat Condition:''' Any Ally is defeated; Ally battleship is defeated, Sanger or Rastel are defeated '''Skill Point:''' In 5 turns, destroy the General of Hell or Flora. '''Secret Requirements:''' '''Unit Acquisition:'''
*Dygenguar (Sanger)
*Assenseiter (Ratsel)

|'''Victory Condition:''' (1) Valgo is defeated; (2)(3) Defeat all enemies '''Defeat Condition:''' (1) Mylene, Ray, or Gamlin are defeated; (2) Basara, Mylene, Ray, or Gamlin are defeated; (3) Ideon is defeated '''Skill Point:''' In 6 turns, destroy Valgo '''Secret Requirements:'''
*Gavil and FBz-99G Zaubergeran
**Gamlin must defeat Gavil 
'''Unit Acquisition:'''
*VF-17D Nightmare → VF-17S Nightmare (Gamlin)
*VF-17D Nightmare (Docker)
**VF-17S (Gamlin), VF-17D (Physica) and VF-17D (Docker) gain the "Diamond Force Attack" combination attack
*VF-19 Kai Fire Valkyrie, VF-11 MAXL Kai, and VF-17 Kai Nightmare gain the "Sound Booster" mech ability
**All VF-19 Kai Fire Valkyrie SB Songs gain (MAP) and (ALL) combination attack variants when Sound Booster activates.
**All VF-11 MAXL Kai SB Songs gain (MAP) and (ALL) combination attack variants when Sound Booster activates.
*Ideon (Cosmo, Kasha, Moera)
** Ideon gains the "Ideon Sword" and "Ideon Sword (MAP)" attacks when IDE gauge is full, and HP is below 30%
*Soloship (Bess, Hatari)

|-
| class="fc-route2" |'''第３３話：暁への脱出 Scenario 33 - Escape to Daybreak'''
| class="fc-route4" |'''第３３話：受け継ぎし遺産 Scenario 33 - The Successor's Inheritance'''

|-
|'''Victory Condition:''' (1)(2) Defeat all enemies besides the Albion '''Defeat Condition:''' (1) Ally battleship is defeated, Kira, Shinobu, or Alan are defeated, Albion is defeated; (2) Kira, Shinobu, Alan, Mwu, or Cagalli are defeated '''Skill Point:''' In 8 turns, destroy all enemies except the Albion '''Secret Requirements:''' '''Unit Acquisition:'''
*Strike Gundam (Mwu)
*Strike Rouge (Cagailli)
*M1 Astray (Juri)
*M1 Astray (Mayura)
*M1 Astray (Asagi)
*Justice Gundam (Athrun)
*Buster Gundam (Dearka)
*Mazinger Z gains the "Giant Swing Rocket Punch" attack
*Great Mazinger gains the "Great Booster" attack
*Koutetsu Jeeg stats are enhanced and can transform into Jeeg Panzeroid
*Dancouga and Black Wing can combine into Final Dancouga.

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated, Akira or Jinguji are defeated '''Skill Point:''' In 8 turns, destroy Etzira, Valgo, Glavil, Gabro Zan, and Gije '''Secret Requirements:''' '''Unit Acquisition:'''
*VF-1A S Valkyrie (Kakizaki)
*Raideen gains the Mutron Open mech ability
*Ideon (Cosmo, Kasha, Moera)
*Soloship (Bess, Hatari)
*Battle 7 (Max, Exedore, Miho, Sally)
*VF-1S S Valkyrie (Fokker)
*VF-1S S Valkyrie (Hikaru)
*VF-1A S Valkyrie (Kakizaki)
*YF-19 (Isamu)
*YF-21 (Guld)
*VF-19 Kai Fire Valkyrie (Basara)
*VF-11 MAXL Kai (Mylene)
*VF-17 Kai Nightmare (Ray, Veffidas)
*VF-17S Nightmare (Gamlin)
*VF-17D Nightmare (Physica)
*VF-17D Nightmare (Docker)

|}
 

==Stages 34 - 44==
{| width="100%"
|- class="fc-route-h"
| width="25%" |'''Touma Route'''
| width="25%" |'''Kusuha Route'''
| width="25%" |'''Cobray Route'''
| width="25%" |'''Selena Route'''

|-
| class="fc-route1" |'''第３４話：武人の心、その意味 Scenario 34 - Why a Warrior Fights'''
| class="fc-route2" |'''第３４話：怒りの強念者 Scenario 34 - The Wrath of a Esper'''
| class="fc-route3" |'''第３４話：虚ろな魂の捕囚 Scenario 34 - Captivity of the Hollow Soul'''
| class="fc-route4" |'''第３４話：ベトレイヤー Scenario 34 - Betrayer'''

|-
|'''Victory Condition:'''
*1st Part: (1)(2) Defeat all enemies
*2nd Part: Bemidoban is defeated 
'''Defeat Condition:'''
*1st Part: (1) Ally battleship is defeated; (2) Ally battleship is defeated, Touma is defeated
*2nd Part: Touma is defeated
'''Skill Point:''' Defeat all enemies within 6 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Raioh (Touma)
*Mazinger Z, Great Mazinger and Getter Dragon gain the "F Dynamic Special" combination attack

|'''Victory Condition:'''(1)(2) Shin RyuOhKi is defeated; (3)(4) Bemidoban and Shmuel are defeated '''Defeat Condition:''' (1) Any ally is defeated; (2) Kusuha is defeated; (3) Kusuha is defeated, Ally battleship is defeated; (4) Ally battleship is defeated '''Skill Point:''' Destroy the Bemidoban (retreats (8000 (E) / 10000 (N) / 12000 (H)) HP) '''Secret Requirements:''' '''Unit Acquisition:'''
*Mazinger Z, Great Mazinger and Getter Dragon gain the "F Dynamic Special" combination attack
*Dygenguar (Sanger)
*Aussenseiter (Ratsel)

|'''Victory Condition:''' Shin RyuOhKi is defeated '''Defeat Condition:''' Ally battleship is defeated, Cobray, Arad, or Seolla are defeated '''Skill Point:''' Defeat Shin RyuOuKi within 6 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Werkbau (Cobray)
*Mazinger Z, Great Mazinger and Getter Dragon gain the "F Dynamic Special" combination attack

|'''Victory Condition:''' (1) Shmuel is defeated; (2)(3) Bemidoban defeated Shin RyuOhKi '''Defeat Condition:''' (1) Selena is defeated; (2) Ally battleship is defeated, Selena is defeated; (3) Ally battleship is defeated '''Skill Point:''' Bemidoban and Shin RyuOuKi shot down. Both flee when below (8000 (E) / 10000 (N) / 12000 (H)) HP. '''Secret Requirements:''' '''Unit Acquisition:'''
*Mazinger Z, Great Mazinger and Getter Dragon gain the "F Dynamic Special" combination attack
*Alterion (CF) (Ibis, Tsugumi)
*AS Soleares (Selena, Elma) is unavailable during the intermission

|-
| class="fc-route1" |'''第３５話：闘志、誰がために Scenario 35 - For Whom the Fighting Spirit Burns'''
| class="fc-route2" |'''第３５話：魂、久遠に Scenario 35 - The Soul, Into Eternity'''
| class="fc-route3" |'''第３５話：THE GUN OF DIS Scenario 35 - THE GUN OF DIS'''
| class="fc-route4" |'''第３５話：クロージング・ハート Scenario 35 - Closing Heart'''

|-
|'''Victory Condition:''' (1)(2) Defeat all enemies '''Defeat Condition:''' (1) Touma is defeated; (2) Ally battleship is defeated, Touma, Sanger, or Rastel are defeated '''Skill Point:''' Defeat all enemies within 4 turns of allied reinforcements arriving. '''Secret Requirements:''' '''Unit Acquisition:'''
*DaiRaioh(Touma)
*Dygenguar (Sanger)
*Aussenseiter (Ratsel)

|'''Victory Condition:''' (1)(2)(3) Shin RyuOhKi is defeated '''Defeat Condition:''' (1) Kusuha or Bullet are defeated; (2) Kusuha is defeated; (3) Ally battleship is defeated, Kusuha is defeated '''Skill Point:''' Destroy Shin RyuOhKi within 6 turns of Varuch Ben and Ishar's arrival, destroying them first. '''Secret Requirements:''' '''Unit Acquisition:'''
*GouRyu Kai (Kusuha)
*Raiko Kai (Bullet)
*Shin RyuKoOh (Kusuha, Bullet)
*Dygenguar (Sanger)
*Aussenseiter (Ratsel)

|'''Victory Condition:''' (1)(2) Bemidoban or Shmuel are defeated; (3) ??? is defeated; (4) Valk Baal is defeated '''Defeat Condition:''' (1) Cobray is defeated, (2)(3)(4) Ally battleship is defeated, Cobray is defeated '''Skill Point:''' Defeat the Bemidoban within 5 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Varuch Ben (Cobray)
*Dis Astranagant (Cobray)

|'''Victory Condition:''' (1)(2) Defeat all enemies '''Defeat Condition:''' (1) Selena is defeated; (2) Ally battleship is defeated '''Skill Point:''' Map cleared within 7 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Eslim (Selena)
*Alterion (CF) replaces Tsugumi with Slay as a Subpilot

|-
| colspan="4" class="fc-std-sc" |'''第３６話：激突！勇者VS勇者！ Scenario 36 - Clash! Brave vs. Brave!'''

|-
| colspan="4" |'''Victory Condition:'''
*1st Part: Defeat all enemies
*2nd Part: Ally battleship is defeated
'''Defeat Condition:'''
*1st Part: Star GaoGaiGar is defeated
*2nd Part: Gai is defeated
'''Skill Point:''' Defeat all enemies within 6 turns. '''Secret Requirements:'''
*EVA-01 F-Type Equipment
**Shinji must defeat Ramiel on the first part of this scenario.
*Early Nu Gundam HWS
**Amuro must have 60 or more kills by the end of the scenario.
*GP-02A
**Burning, Monsha, Bate, and Adel must have a combined killcount of 100 or more by the end of the scenario.
*Nuclear Bazooka
**Meet the requirements for GP-02A
*Black Getter
**Michiru must have 20 kills or more by the end of the scenario.
'''Unit Acquisition:'''
*Gundam GP02
*Megarider
*Re-GZ BWS
*MP Nu Gundam
*Black Getter
*VF-1S S Valkyrie (Fokker)
*VF-1S S Valkyrie (Hikaru)
*VF-1A S Valkyrie (Kakizaki)
*VF-1J S Valkyrie
*YF-19 (Isamu)
*YF-21 (Guld)
*Battle 7 (Max)
*VF-19 Kai Fire Valkyrie (Basara)
*VF-11 MAXL Kai (Mylene)
*VF-17 Kai Nightmare (Ray)
*VF-17S Nightmare (Gamlin)
*VF-17D Nightmare (Physica)
*VF-17D Nightmare (Docker
*Soloship (Bess, Hatari)
*Ideon (Cosmo, Kasha, Moera)

|-
| colspan="4" class="fc-std-sc" |'''第３７話：果て無き旅路の始まり Scenario 37 - The Beginning of an Unending Journey'''

|-
| colspan="4" |'''Victory Condition:''' (1) Defeat all enemies; (2)(3) Devariim is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated; (3) Ally battleship is defeated, Bundle, Cutnall, or Kernagul are defeated
'''Skill Point:''' All enemies destroyed within 6 turns, with Devariim being last. '''Secret Requirements:''' '''Unit Acquisition:'''
*Heavy Weapons System parts for Nu Gundam
*Evangelion Unit 0 Custom gains the "N2 Mine" MAP attack
*Evangelion Unit 1 gains the "Magoroku E Sword" attack
*Gunbuster (Noriko)
*Sizzler Black (Jung)
*Eltrium (Tashiro, Deputy Chief)
*Bundle Ship (Bundle)
*Cutnall Ship (Cutnall)
*Kernagul Ship (Kernagul)

|- class="fc-route-h"
| colspan="2" |'''Go with the Soloship''' Gundam (0083, Zeta, ZZ, CCA, Wing, SEED) Getter Robo Raideen Daitarn 3 Evangelion Ideon GaoGaiGar
| colspan="2" |'''Go with the Battle 7''' Mazinger (Z, Great) Macross (DYRL, 7, Plus) Steel Jeeg Combattler V Voltes V Gunbuster Daimos Gaiking Goshogun Dancouga Virtual On

|-
| colspan="2" class="fc-route1" |'''第３８話：運命の炎の中で Scenario 38 - Within the Fires of Destiny'''
| colspan="2" class="fc-route3" |'''第３８話：戦火は星の瞬きと Scenario 38 - The Fires of War Among the Twinkling Stars'''

|-
| colspan="2" |'''Victory Condition:'''
*1st Part: Enemy Battleship is defeated
*2nd Part: (1) Defeat all enemies; (2) Dalam's Ship is defeated
'''Defeat Condition:'''
*1st Part: Ally battleship is defeated, Ideon is defeated
*2nd Part: (1) Ally battleship is defeated; (2) Ally battleship is defeated, Cosmo is defeated
'''Skill Point:''' Clear the map within 7 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Ideon loses Moera as a subpilot
*Ideon gains the "Ideon Gun" attack

| colspan="2" |'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Defeat all enemies within 6 turns. '''Secret Requirements:''' '''Unit Acquisition:'''

|-
| colspan="2" class="fc-route1" |'''第３９話：果てに待つもの Scenario 39 - What Awaits at the End'''
| colspan="2" class="fc-route3" |'''第３９話：ただ母星のために Scenario 39 - All for the Motherworld'''

|-
| colspan="2" |'''Victory Condition:''' (1)(2)Gabro Zan is defeated '''Defeat Condition:''' (1) Ally battleship is defeated, Ryouma, Hayato, Benkei, or Michiru are defeated; (2) Ally battleship is defeated, Ryouma, Hayato, Benkei, or Cosmo are defeated '''Skill Point:''' Destroy all Buff Clan ships within 8 turns, saving Gabro Zan for last. '''Secret Requirements:''' '''Unit Acquisition:'''
* Ideon gains Gije as a subpilot
* Shin Getter-1 gains the "Shin Shine Spark" attack

| colspan="2" |'''Victory Condition:''' Heinel is defeated '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Within 7 turns, defeat all enemies, then defeat Heinel and Richter (Richter must be defeated before Heinel) '''Secret Requirements:''' '''Unit Acquisition:'''

*Goshogun gains the "GoFlasher Special" attack

|-
| colspan="2" class="fc-route1" |'''第４０話：勇者王、最後の刻！ Scenario 40 - The King of Brave’s Final Hour!'''
| colspan="2" class="fc-route3" |'''第４０話：勇気、果つる時… Scenario 40 - When Courage Fails...'''

|-
| colspan="2" |'''Victory Condition:'''
*1st Part: Defeat all enemies
*2nd Part: Ally battleship is defeated
'''Defeat Condition:'''
*1st Part: Defeat all enemies
*2nd Part: Gai is defeated
'''Skill Point:''' Defeat all enemies within 6 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*All GaoGaiGar units are lost

| colspan="2" |'''Victory Condition:''' (1)(2)(3) Defeat all enemies '''Defeat Condition:''' (1) Gai is defeated; (2) Ally battleship is defeated, Gai is defeated; (3) Ally battleship is defeated '''Skill Point:''' Defeat all enemies within 7 turns, with Palparepa Plus being the last one. '''Secret Requirements:''' '''Unit Acquisition:'''
*GaoFighGar (Gai)
*All GaoGaiGar units are lost

|-
| colspan="4" class="fc-std-sc" |'''第４１話：銀河が消滅する日 Scenario 41 - The Day the Galaxy is Extinguished'''

|-
| colspan="4" |'''Victory Condition:''' (1) Defeat all enemies; (2) GaoFighGar is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated, J is defeated '''Skill Point:''' GaoFighGar shot down by turn 7. '''Secret Requirements:'''
*Gije & Ganga Rube
**When given the option, choose to meet the opponent's challenge (first option).
'''Unit Acquisition:'''
*J-Ark (J, Tomoro)
|-
| colspan="4" class="fc-std-sc" |'''第４２話：超勇者黙示録 Scenario 42 - The Super Brave Apocalypse'''

|-
| colspan="4" |'''Victory Condition:'''
*1st Part: Defeat all enemies
*2nd Part: Genesis GaoGaiGar reaches the designated point in 4 turns
'''Defeat Condition:'''
*1st Part: Gai or J are defeated
*2nd Part: Ally battleship is defeated, Gai is defeated, 5th turn is reached
'''Skill Point:''' All enemies shot down by turn 7. '''Secret Requirements:'''
* J-Phoenix & Renais (Sub Pilot)
**Have J defeat Pia Decem on the first part of the stage. Defeat Pia Decem again to gain the attack.
'''Unit Acquisition:'''
* King J-der gains the "J-Phoenix" attack, and gains Renais as a sub-pilot
**Koryuu and Anryuu lose the "Renais Support Attack" attacks
*Genesic GaoGaiGar (Gai)
*J-Ark (J, Tomoro)
** Renais also is a sub-pilot if the conditions are met in the first part of the stage
*Goldymarg (Goldymarg)
*Big Volfogg (Volfogg)
*TenRyuJin (TenRyuJin)
*KoRyu (KoRyu)
*AnRyu (AnRyu)
*EnRyu (EnRyu)
*HyoRyu (HyoRyu)
*Mic Sounder XIII (Mic Sounder XIII)

|- class="fc-route-h"
|'''Touma Route'''
|'''Kusuha Route'''
|'''Cobray Route'''
|'''Selena Route'''

|-
| class="fc-route1" |'''第４３話：閉ざされた世界で Scenario 43 - In a Closed-Off World'''
| class="fc-route2" |'''第４３話：真の龍神 Scenario 43 - The True Dragon God'''
| class="fc-route3" |'''第４３話：人形たちの宴 Scenario 43 - The Doll’s Banquet'''
| class="fc-route4" |'''第４３話：サイレント・クライ Scenario 43 - Silent Cry'''

|-
|'''Victory Condition:'''
*1st Part: (1) Defeat all enemies; (2) Vaikran is defeated, Houle is defeated
*2nd Part: Baran is defeated
'''Defeat Condition:'''
*1st Part: (1) Ally battleship is defeated, Touma or Ryusei are defeated; (2) Ally battleship is defeated, Ryusei is defeated
*2nd Part: Touma is defeated
'''Skill Point:''' Defeat the Bemidoban within 5 turns. '''Secret Requirements:''' '''Unit Acquisition:'''

|'''Victory Condition:''' (1) Defeat Shin RyuOhKi; (2) Vaikran is defeated, Houle is defeated '''Defeat Condition:''' (1) Kusuha or Ryusei are defeated; (2) Ally battleship is defeated, Ryusei is defeated '''Skill Point:''' Defeat Shin RyuOhKi within 5 turns. '''Secret Requirements:''' '''Unit Acquisition:'''

|'''Victory Condition:'''
*1st Part: (1) Defeat all enemies; (2) Vaikran is defeated, Houle is defeated
*2nd Part: Valk Baal is defeated
'''Defeat Condition:'''
*1st Part: (1)(2) Ally battleship is defeated, Ryusei is defeated
*2nd Part: Cobray is defeated
'''Skill Point:''' Defeat the Bemidoban within 5 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Dis Astranagant (Cobray) is unavailable during the intermission

|'''Victory Condition:''' (1) Defeat all enemies; (2)(3) Vaikran is defeated, Houle is defeated'''Defeat Condition:''' (1)(2) Ally battleship is defeated, Selena, Ibis, or Ryusei are defeated (3) Ryusei is defeated'''Skill Point:''' Defeat the Bemidoban within 5 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*AS Alegrias (Selena, Elma?) Is unavailable until the next stage

|-
| class="fc-route1" |'''第４４話：闘志、未来のために Scenario 44 - Fighting Spirit, for the Future'''
| class="fc-route2" |'''第４４話：四神招魂、ここに Scenario 44 - The Four Gods Souls, Gather Here'''
| class="fc-route3" |'''第４４話：鋼の戦神 Scenario 44 - The Steel War God'''
| class="fc-route4" |'''第４４話：マイホーム・マイフレンズ Scenario 44 - My Home, My Friends'''

|-
|'''Victory Condition:'''
*1st Part: Vaikran is defeated
*2nd Part: (1)(2) Vaikran is defeated
'''Defeat Condition:'''
*1st Part: Ally battleship is defeated, Ryusei is defeated
*2nd Part: (1) Touma or Lyria are defeated; (2) Touma, Baran, or Lyria are defeated
'''Skill Point:''' Destroy the Vaikran within 5 turns. '''Secret Requirements:'''
*VF-19F Excaliburs
**Max must have a total of 60 or more kills by the end of the scenario, if you do not pick the Go to Varauta route.
*Gije & Ganga Rube
**You must pick the Go To Bozoan Route.
'''Unit Acquisition:'''
* DaiRaioh gains the "Jinrai" attack 
*Banpreios (Ryuusei, Rai, Mai)
*Dygenguar (Sanger)
*Aussenseiter (Ratsel)
*Shumel (Lyria)
*Bemidoban (Baran)

|'''Victory Condition:'''
*1st Part: Vaikran is defeated
*2nd Part: (1)(2) Vaikran is defeated
'''Defeat Condition:'''
*1st Part: Kusuha or Ryusei are defeated
*2nd Part: (1) Ally battleship is defeated, Kusuha is defeated; (2) Kusuha, Bullet, or Lyria are defeated
'''Skill Point:''' Destroy the Vaikran within 5 turns. '''Secret Requirements:'''
*VF-19F Excaliburs
**Max must have a total of 60 or more kills by the end of the scenario, if you do not pick the Go to Varauta route.
*Gije & Ganga Rube
**You must pick the Go To Bozoan Route.
'''Unit Acquisition:'''
*Banpreios (Ryuusei, Rai, Mai)
*Dygenguar (Sanger)
*Aussenseiter (Ratsel)
*Shumel (Lyria)
*Shin RyuKoOh can now transform into Shin KoRyuOh

|'''Victory Condition:'''
*1st Part: (1) Defeat all enemies; (2) Vaikran is defeated
*2nd Part: Defeat all enemies
'''Defeat Condition:'''
*1st Part: (1)(2) Ally battleship is defeated, Ryusei, Arad or Seola are defeated
*2nd Part: Ally battleship is defeated, Cobray or Lyria are defeated
'''Skill Point:''' Destroy the Vaikran within 3 turns of its arrival. '''Secret Requirements:'''
*VF-19F Excaliburs
**Max must have a total of 60 or more kills by the end of the scenario, if you do not pick the Go to Varauta route.
*Gije & Ganga Rube
**You must pick the Go To Bozoan Route.
'''Unit Acquisition:'''
*Dis Astranagant (Cobray)
*Banpreios (Ryuusei, Rai, Mai)
*Dygenguar (Sanger)
*Aussenseiter (Ratsel)
*Shumel (Lyria)

|'''Victory Condition:'''
*1st Part: (1) Valk Isher is defeated; (2) Vaikran is defeated
*2nd Part: (1)(2) Vaikran is defeated
'''Defeat Condition:'''
*1st Part: (1)(2) Ally battleship is defeated, Ryusei or Ibis are defeated
*2nd Part: (1) Ally battleship is defeated, Selena, Ibis, or Lyria are defeated; (2) Selena or Lyria are defeated
'''Skill Point:''' Destroy the Vaikran within 3 turns of its arrival. '''Secret Requirements:'''
*VF-19F Excaliburs
**Max must have a total of 60 or more kills by the end of the scenario, if you do not pick the Go to Varauta route.
*Gije & Ganga Rube
**You must pick the Go To Bozoan Route.
'''Unit Acquisition:'''
*Banpreios (Ryuusei, Rai, Mai)
*Dygenguar (Sanger)
*Aussenseiter (Ratsel)
*Shumel (Lyria)
*Alterion (CF) replaces Slay with Tsugumi as a subpilot
*Vegalion (Slay)
**Alterion (CF) and Vegalion can combine into Hyperion

|}
 

==Stages 45 - 48==
{| width="100%"
|- class="fc-route-h"
| colspan="2" |'''Go to Earth'''
| colspan="2" |'''Go to Space'''

|- class="fc-route-h"
| width="25%" |'''Search for Irui''' Mazinger (Z, Great) Getter Robo Kotetsu Jeeg Gaiking Dancouga
| width="25%" |'''Fight against ZAFT''' Gundam (0083, Z, ZZ, CCA) Gundam Wing Gundam SEED Evangelion
| width="25%" |'''Go to Varauta''' Macross (DYRL, 7, Plus) GoShogun Daitarn 3 Gunbuster
| width="25%" |'''Go to Boazan''' Ideon Combattler V Voltes V Daimos Raideen GaoGaiGar Virtual On

|-
| class="fc-route1" |'''第４５話：とらわれの心、叫ぶ時 Scenario 45 - When the Captive Heart Cries Out'''
| class="fc-route2" |'''第４５話：忍び寄る終焉 Scenario 45 - Creeping Death'''
| class="fc-route3" |'''第４５話：悪夢の突入作戦 Scenario 45 - Charging into a Nightmare'''
| class="fc-route4" |'''第４５話：もう一つの母星ボアザン Scenario 45 - Another Mother Planet - Boazan'''

|-
|'''Victory Condition:''' (1) Defeat all enemies: (2) Legion is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated '''Skill Point:''' Defeat all enemies within 7 turns '''Secret Requirements:'''
'''Unit Acquisition:'''

|'''Victory Condition:''' (1) Defeat all enemies; (2) All Angels are defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated, Shinji, Asuka, or Rei are defeated '''Skill Point:''' Defeat all enemies within 5 turns. '''Secret Requirements:'''
*Early Nu Gundam HWS
**If you did not receive it on Scenario 37, Amuro must have 60 or more kills by the end of the scenario.
*EVA-01 F-Type Equipment(optional)
**Shinji must defeat Armisael.
*Neue Ziel
**Kou must have 40 or more kills than Keith by the end of the scenario.
*Val Varo
**Keith must have 20 or more kills than Kou by the end of the scenario.
*Gerbera Tetra
**Kou and Keith's killcounts must be within 6 of one another by the end of the scenario.
*Quin Mantha
**The sum of Ple and Ple 2's killcounts must be a number ending in 5 at the end of the scenario.
*Haman's Qubeley
**The sum of Ple and Ple 2's killcounts must be a number ending in 0 at the end of the scenario.
*MP Qubeleys
**The sum of Ple and Ple 2's killcounts must be a number ending in 7 at the end of the scenario.
*Doven Wolf
**The sum of Beecha and Mondo's killcounts must be a number ending in 0 at the end of the scenario.
*Geymalk
**The sum of Beecha and Mondo's killcounts must be a number ending in 5 at the end of the scenario.
*Strike Rouge IWSP
**The sum of Cagalli, Julie, Mayura, and Asagi's killcounts must be 100 or more by the end of the scenario.
*Early Full Armor ZZ Gundam
**Judau, Mondo, Beecha, Elle, Roux, and Iino's combined killcounts must be greater than 115 by the end of this scenario.
'''Unit Acquisition:'''
*Neue Ziel OR Val Varo OR Gerbera Tetra
*Quin Mantha OR Haman's Qubeley OR Mass Production Qubeley (x2)
*Doven Wolf OR Geymalk
*Strike Rougue IWSP
*Heavy Weapon System for Nu Gundam
*Full Armor Parts for ZZ Gundam
*Evangelion Unit 2 gains the "A.T. Field" attack
*Evangelion Unit 0 Custom gains the "Lance of Longinus" attack

|'''Victory Condition:'''
*1st Part: All allies reach the designated point, aside Battle 7
*2nd Part: Any ally reaches the designated point
'''Defeat Condition:'''
*1st Part: Any ally is defeated
*2nd Part: Any ally is defeated
'''Skill Point:''' Defeat all enemies before moving a unit to the target area. '''Secret Requirements:'''
'''Unit Acquisition:'''
*The following all gain the "Large Anti-Ship Reaction Missile" attack
**VF-1S S Valkyrie (Focker), VF-1S S Valkyrie (Hikaru), VF-1A S Valkyrie (Kakizaki)
**VF-17S Nightmare (Gamlin), VF-17D Nightmare (Docker), VF-17D Nightmare (Physica)
**YF-19 (Isamu), YF-21 (Guld)

|'''Victory Condition:''' Zartan is defeated '''Defeat Condition:''' Any ally is defeated '''Skill Point:''' Destroy all other enemies before destroying Zaltan. '''Secret Requirements:'''
'''Unit Acquisition:'''
*Voltes V is unavailable during the intermission
*Daimos is unavailable during the intermission

|-
| class="fc-route1" |'''第４６話：さらば父よ、戦士達の旅立ち Scenario 46 - Farewell, Father! The Warriors Depart'''
| class="fc-route2" |'''第４６話：永遠を信じて Scenario 46 - Believe in Eternity'''
| class="fc-route3" |'''第４６話：野望の第４惑星 Scenario 46 - The Fourth Planet of Ambition'''
| class="fc-route4" |'''第４６話：崩れゆく邪悪の塔 Scenario 46 - The Collapsing Tower of Evil'''

|-
|'''Victory Condition:''' (1) Steel Jeeg persuades Flora; (2) Defeat Yamata no Orochi, Demonica, and the Dragon Ship; (3) '''Defeat Condition:''' (1) Flora is defeated, Ally battleship is defeated, Kouji, Tetsuya, or Steel Jeeg are defeated; (2) Yamata no Orochi reaches the designated point, Ally battleship is defeated, Kouji, Tetsuya or Steel Jeeg are defeated '''Skill Point:''' Destroy Ryuuma and the Grand Marshall of Hell within 8 turns. '''Secret Requirements:'''
*Minmei's Disc
**Move Boss's squad onto either 'Hut' tile on the beach, and you will pick up the item
'''Unit Acquisition:'''
*Mazinkaizer gains the "Kaizer Nova" attack and Flight (S Rank in Air)

|'''Victory Condition:''' (1)(2) Defeat all enemies; (3) The Dominion withdraws '''Defeat Condition:''' (1) Any ally is defeated; (2)(3) Ally battleship is defeated, Kira or Athrun are defeated '''Skill Point:''' Destroy the Dominion (retreats at (10000HP (E) / 15000HP (N)/20000HP (H)) '''Secret Requirements:''' '''Unit Acquisition:'''
*Eternal (Lacus, Andrew)
*BuCUE
*METEOR parts for Freedom Gundam
*METEOR parts for Justice Gundam
*LaGOWE

|'''Victory Condition:''' (1) Guide all enemies east past the designated line; (2) All allies reach the escape point '''Defeat Condition:''' (1) Any ally is defeated, Any enemy is defeated; (2) Any ally is defeated '''Skill Point:''' Clear the map by defeating all enemies within 8 turns of the victory condition change '''Secret Requirements:'''
*VF-19F Excaliburs
**Max must get 15 or more kills on this scenario.
'''Unit Acquisition:'''
*VF-22S Sturmvogel II (Max)
*FBz-99G Zaubergeran (Gamlin)
*VF-19 Kai Fire Valkyrie gains the song "TRY AGAIN"
**VF-19 Kai Fire Valkyrie, VF-11 MAXL Kai, and VF-17 Kai Nightmare gain the "TRY AGAIN" (MAP) and (ALL) combination attack

|'''Victory Condition:''' (1) None; (2) Warchimedes is defeated; (3) Janera is defeated '''Defeat Condition:''' (1) Any friendly unit is defeated, Voltes V or Daimos are defeated; (2)(3) Ally battleship is defeated, Hyouma, Ken'ichi, Kazuya, or Heinel are defeated '''Skill Point:''' Destroy all enemies and finish the stage within 10 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Combattler V, Voltes V, and Daimos gain the "Choudenji SeiKenZuki" combination attack

|-
| class="fc-route1" |'''第４７話：神になろうとした男 Scenario 47 - The Man Who Tried to Become a God'''
| class="fc-route2" |'''第４７話：ヒトの見た夢 Scenario 47 - The Dream People Saw'''
| class="fc-route3" |'''第４７話：大宇宙の意志 Scenario 47 - The Will of the Universe'''
| class="fc-route4" |'''第４７話：因果の海で Scenario 47 - In the Sea of Causality'''

|-
|'''Victory Condition:''' (1) Defeat all enemies; (2) Shapiro is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated '''Skill Point:''' Destroy Shapiro within 6 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Gaiking and Daiku Maryuu gain the "Giant Cutter Upside-down Slash" combination attack

|'''Victory Condition:''' (1)(2)(3) Defeat all enemies; '''Defeat Condition:''' (1) Ally battleship is defeated, Kira, Mwu, or Dearka are defeated; (2) Kira is defeated; (3) The Vesalius is defeated '''Skill Point:''' Orga, Clotho and Shani shot down before Fllay reaches the Dominion. '''Secret Requirements:''' '''Unit Acquisition:'''

|'''Victory Condition:''' (1)(2)(3) Defeat all enemies '''Defeat Condition:''' (1) Any ally is defeated; (2) Ally battleship is defeated, Bundle is defeated; (3) Ally battleship is defeated, Bundle, Gamlin, or Mylene are defeated '''Skill Point:''' Destroy all SMTC units within 5 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*VF-19S Excalibur (before deployment)
*VF-19F Excalibur (x2) (before deployment)
*Bundle's Ship (Bundle, Cutnal, Kernagul)

|'''Victory Condition:'''
*1st and 2nd Part: Defeat all enemies within (5 (E) / 4 (N) / 3 (H)) turns
*3rd and 4th Part: Defeat all enemies within (4 (E) / 3 (N) / 2 (H)) turns
*5th Part: Defeat all enemies within (8 (E) / 7 (N) / 6 (H)) turns
'''Defeat Condition:'''
*1st and 2nd Part: Ally battleship is defeated, Turn (6 (E) / 5 (N) / 4 (H)) is reached
*3rd and 4th Part: Ally battleship is defeated, Turn (5 (E) / 4 (N) / 3 (H)) is reached
*5th Part: Ally battleship is defeated, Turn (9 (E) / 8 (N) / 7 (H)) is reached
'''Skill Point:''' During the 5th Part: Shoot down the two Gataman Zans before the Gabro Zan '''Secret Requirements:''' '''Unit Acquisition:'''

|-
| colspan="2" class="fc-route1" |'''第４８話：失われた者たちへの鎮魂歌 Scenario 48 - Requiem for the Lost'''
| colspan="2" class="fc-route4" |'''第４８話：銀河に死す Scenario 48 - To Die in the Galaxy'''

|-
| colspan="2" |'''Victory Condition:''' (1) Deathgaia, Gildrome, and Helmut are defeated; (2) Mute Zalbados is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated '''Skill Point:''' Defeat all enemies within 6 turns after Muge Zalbados appears, then defeat Muge Zalbados '''Secret Requirements:'''
*Early Nu Gundam HWS
**If you did not receive it on Scenario 37 or 45, Amuro must have 60 or more kills by the end of the scenario.
'''Unit Acquisition:'''

| colspan="2" |'''Victory Condition:''' (1) Defeat all enemies; (2) Gollum or Zomd are defeated; (3) Defeat all enemies; (4) Gabro Zan is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated, Basara is defeated; (3)(4) Ally battleship is defeated, Ideon is defeated '''Skill Point:''' Destroy GaviGla (retreats at 8000HP (E) / 10000HP (N) / 12000HP (H)) '''Secret Requirements:'''
*Early Nu Gundam HWS
**If you did not receive it on Scenario 37 or 45, Amuro must have 60 or more kills by the end of the scenario.
*Gije & Ganga Rube
**The Ide Gauge must reach level 5 during this scenario.
'''Unit Acquisition:'''
*Ideon replaces Gije with Dek as a Subpilot
*Battle 7 gains the "Large Anti-Ship Reaction Missile" attack
*VF-19 Kai Fire Valkyrie (Basara) is unavailable during the intermission

|}
 

==Stages 49 - 58==
{| width="100%"
|-
| colspan="3" class="fc-std-sc" |'''第４９話：銀河に響く歌声 Scenario 49 - Songs Resounding Through the Galaxy'''

|-
| colspan="3" |'''Victory Condition:'''
*1st Part: Defeat all enemies, In 5 turns Battle 7 reaches the designated point
*2nd Part: (1) In 6 turns, Battle 7 reaches the designated point; (2)(3)(4) Gepelnitch is defeated
'''Defeat Condition:'''
*1st Part: Ally battleship is defeated, Battle 7 doesn't reach the designated point by turn 6
*2nd Part: (1) Ally battleship is defeated, Mylene or Ray are defeated, Battle 7 doesn't reach the designated point by turn 7; (2) Ally battleship is defeated, Ray is defeated; (3) Ally battleship is defeated, Basara, Mylene, or Ray are defeated; (4) Ally battleship is defeated, Basara, Mylene, Ray, or Sybil are defeated
'''Skill Point:''' GaviGla is defeated (in the 1st part) '''Secret Requirements:'''
*Gavil and FBz-99G Zaubergeran
**If Gamlin has over 50 kills, Gamlin must defeat GaviGla during the first half of the scenario. During the second half of the scenario, do not defeat Gavil.
'''Unit Acquisition:'''
*VF-22S Sturmvogel II (Max)
*VF-22S Sturmvogel II (Milia)
*Sybil (Sybil)
**VF-19 Kai Fire Valkyrie, VF-11 MAXL Kai, and VF-17 Kai Nightmare, and Sybil gain the "TRY AGAIN" combination attack
*FBz-99G Zaubergeran (Gavil)

|-
| colspan="3" class="fc-std-sc" |'''第５０話：二つの門と二つの星 Scenario 50 - Two Gates, Two Stars'''

|-
| colspan="3" |'''Victory Condition:''' (1) Hermodr Echad is defeated; (2) Zfield is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated '''Skill Point:''' Destroy the Hermodr Echad within 5 turns. '''Secret Requirements:'''
*Duel Gundam & Yzak
**Dearka's killcount must be 50 or more by the end of the scenario.
'''Unit Acquisition:'''

|-
| colspan="3" class="fc-std-sc" |'''第５１話：終わらない明日へ Scenario 51 - To an Unending Tomorrow'''

|-
| colspan="3" |'''Victory Condition:'''
*1st Part: (1) Destroy all nuclear missiles; (2) Dominion is defeated & Athrun reaches the designated point
*2nd Part: Destroy the Genesis reactor within 4 turns
'''Defeat Condition:'''
*1st Part: (1) Any missile reaches the end of the map, Ally battleship is defeated, Kira, Athrun or Cagalli are defeated; (2) Ally battleship is defeated, Kira, Athrun or Cagalli are defeated
*2nd Part: Kira is defeated, reach the 5th turn
'''Skill Point:''' Destroy the Providence Gundam (in the 2nd part) '''Secret Requirements:'''
*Duel Gundam & Yzak
**During the first half of the scenario, destroy all of the nukes, then have Dearka battle with Yzak
**Both must survive the first half of the scenario
'''Unit Acquisition:'''
*Lacus unlocks the SEED pilot skill
*Duel Gundam (Yzak)

|-
| colspan="3" class="fc-std-sc" |'''第５２話：世界の中心でアイを叫んだもの Scenario 52 - The One Who Cried "Love" at the Heart of the World'''

|-
| colspan="3" |'''Victory Condition:'''
*1st Part: (1)(2)(3) Defeat all enemies (4)(5) EVA Unit 1 is defeated
*2nd Part: EVA Unit 1 is defeated
'''Defeat Condition:'''
*1st Part: (1) Any ally is defeated; (2) Shinji is defeated; (3)(4) Ally battleship is defeated; (5) Ally battleship is defeated, Reach the 6th turn after the "Cross" grows from the Earth
*2nd Part: Shinji is defeated
'''Skill Point:''' Asuka survives for 2 full turns. '''Secret Requirements:'''
*Neue Ziel
**Kou must have 40 or more kills than Keith by the end of the scenario.
*Val Varo
**Keith must have 20 or more kills than Kou by the end of the scenario.
*Gerbera Tetra
**Kou and Keith's killcounts must be within 6 of one another by the end of the scenario.
*Quin Mantha
**The sum of Ple and Ple 2's killcounts must be a number ending in 5 at the end of the scenario.
*Haman's Qubeley
**The sum of Ple and Ple 2's killcounts must be a number ending in 0 at the end of the scenario.
*MP Qubeleys
**The sum of Ple and Ple 2's killcounts must be a number ending in 7 at the end of the scenario.
*Doven Wolf
**The sum of Beecha and Mondo's killcounts must be a number ending in 0 at the end of the scenario.
*Geymalk
**The sum of Beecha and Mondo's killcounts must be a number ending in 5 at the end of the scenario.
*EVA-01 F-Type Equipment
**Shinji must defeat Zeruel on the first part of this scenario.
**Shinji must defeat EVA-01 on the second part of this scenario.
**The sum of Shinji, Asuka, and Rei's killcounts must be 250 or more, or 150 or more if you met the requirement on scenario 45.
*Hi-Nu Gundam
**Amuro and Bright's combined killcounts must be greater than 120 by the end of this scenario.
*Sazabi
**Amuro and Kamille's killcount must be 50 or more each at the end of this scenario. You will receive it at the start of next scenario.
*Strike Rouge IWSP
**If you did not receive it on Scenario 45, the sum of Cagalli, Julie, Mayura, and Asagi's killcounts must be 100 or more by the end of the scenario.
*Destroid Monster
**If you did not receive it on Scenario 31, the sum of Fokker, Hikaru, and Kakizaki's killcounts must be 100 or more by the end of this scenario.
'''Unit Acquisition:'''
*Evangelion Unit 0 (Kaowru)
*Evangelion Unit 0 loses the "Lance of Longinus" attack

|-
| colspan="3" class="fc-prologue" |'''Beyond this point, losing Ideon results in a Game Over'''
|-
| colspan="3" class="fc-std-sc" |'''第５３話：出航！銀河殴り込み艦隊！ Scenario 53 - The Galactic Assault Fleet Takes Sail!'''

|-
| colspan="3" |'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' 230 enemy units shot down by turn 7. '''Secret Requirements:''' '''Unit Acquisition:'''
*All secret units and parts are given after the stage begins <ul><li>Neue Ziel OR Val Varo OR Gerbera Tetra</li><li>Quin Mantha OR Haman's Qubeley OR Mass Production Qubeley (x2)</li><li>Doven Wolf OR Geymalk</li><li>Strike Rougue IWSP</li><li>Hi-Nu Gundam</li><li>Sazabi</li><li>Destroid Monster</li><li>F-Type Equipment for Evangelion Unit 1</li><li>Atomic Bazooka parts for GP-02</li><li>Heavy Weapon System for Nu Gundam</li><li>Full Armor Parts for ZZ Gundam</li></ul>
*MP Nu Gundam
**Fin Funnel parts for MP Nu Gundam
*Gunbuster adds Kazumi as a Subpilot
**Gunbuster gains the "Super Inazuma Kick" attack
*Ra Cailum gains the "Nuclear Missile" MAP and ALL attacks

|-
| colspan="3" class="fc-std-sc" |'''第５４話：神に守られし星 Scenario 54 - The Planet Guarded by the Gods'''

|-
| colspan="3" |'''Victory Condition:'''
*1st Part: (1) Defeat all enemies; (2) The SRX Team rescues [https://akurasu.net/wiki/Super_Robot_Wars/Alpha_3/Info_Dump#Finding_Aya_on_Scenario_54 Aya]; (3) Jumora is defeated
*2nd Part: Bemidoban is defeated
'''Defeat Condition:'''
*1st Part: (1)(2) Ally battleship is defeated, Ryusei or Viletta are defeated; (3) Ally battleship is defeated, Ryusei, Viletta, Baran, or Lyria are defeated
*2nd Part: Sanger is defeated
**2nd Part (Touma Route): Touma is defeated
'''Skill Point:''' Clear the map within 10 turns, with both Hermoz defeated '''Secret Requirements:''' '''Unit Acquisition:'''
*Banpreios adds Aya as a Subpilot
**Branpreios gains the "Tenjou Tenge Nendou Musou-ken" attack
**Branpreios and R-GUN Powered gain the "Tenjou Tenge Ichigeki Hissatsu-ho" combination attack
*Shumel (Lyria)
*Bemidoban (Baran)

|-
| colspan="3" class="fc-std-sc" |'''第５５話：まつろわぬ神 Scenario 55 - The God Who Resists Order'''

|-
| colspan="3" |'''Victory Condition:'''
*1st Part: (1) Defeat all enemies; (2) Defeat Gebel GanEden
*2nd Part: (1) Defeat all enemies; (2) Defeat Gebel GanEden
'''Defeat Condition:'''
*1st Part: (1)(2) Ally battleship is defeated
*2nd Part: (1)(2) Ally battleship is defeated
'''Skill Point:''' Within 6 turns, defeat both Zfiruds '''Secret Requirements:''' '''Unit Acquisition:'''

|-
| colspan="3" class="fc-std-sc" |'''第５６話：終わりなき総力戦 Scenario 56 - Unending Total War'''

|-
| colspan="3" |'''Victory Condition:'''
*1st Part: Drowa Zan is defeated within 5 turns
*2nd Part: (1) Soloship move next to the Bairal Jinn; (2) Any unit reaches the designated point
'''Defeat Condition:'''
*1st Part: Ally battleship is defeated, 6th turn is reached
*2nd Part: (1)(2) Ally battleship is defeated
'''Skill Point:''' Clear the map within 7 turns. '''Secret Requirements:'''
*Gije & Ganga Rube
**You must pick the Fight The Buff Clan option at the end of the scenario.
*Bad Ending Route
**On New Game+, choose to fight (first option)
'''Unit Acquisition:'''

|- class="fc-route-h"
| width="40%" |'''Fight The Buff Clan''' Ideon, Getter Robo Combattler V, Voltes V, Daimos Daitarn 3 Gundam (0083, Zeta, ZZ, CCA, Wing, SEED)
| width="40%" |'''Fight The STMC''' Mazinger (Z, Great), Steel Jeeg, Raiden Goshogun, Dancouga, Gaiking Macross (DYRL, Plus, 7) Gunbuster, Evangelion, GaoGaiGar Virtual On
| width="20%" |'''Bad Ending '''

|-
| class="fc-route1" |'''第５７話：憎しみの環の中で Scenario 57 - In a Circle of Hatred'''
| class="fc-route3" |'''第５７話：終わりの始まり Scenario 57 - The Beginning of the End'''
| class="fc-prologue" |'''イデ発動ルート最終話：銀河に君と''' '''Ide Activation Final Scenario - With You In The Galaxy'''

|-
|'''Victory Condition:'''
*1st Part: (1) Defeat all enemies; (2) Soloship reaches the designated point
*2nd Part: Defeat all enemies within (11 (E) / 9 (N) / 7 (H)) turns
'''Defeat Condition:'''
*1st Part: (1)(2) All allies are defeated
*2nd Part: Turn (12 (E) / 10 (N) / 8 (H)) is reached, Ally battleship is defeated
'''Skill Point:''' Defeat all enemies within (10 (E) / 8 (N) / 6 (H)) turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Ganga Rube (Gije)

|'''Victory Condition:''' (1)(2) Defeat all enemies '''Defeat Condition:''' (1) Eltrium is defeated; (2) Ally battleship is defeated '''Skill Point:''' Defeat all enemies within 7 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Eltrium (Tashiro, Deputy Chief)

| rowspan="4" |'''Victory Condition:''' Bairal Jinn is defeated '''Defeat Condition:''' Ally battleship is defeated '''Secret Requirements:''' '''Unit Acquisition:'''

|-
| class="fc-route1" |'''第５８話：発動 Scenario 58 - Activation'''
| class="fc-route3" |'''第５８話：死闘、未来を懸けて Scenario 58 - The Mortal Struggle for the Future'''

|-
|'''Victory Condition:'''
*1st Part: Bairal Jinn is defeated
*2nd Part: Bairal Jinn is defeated
'''Defeat Condition:'''
*1st Part: Ally battleship is defeated
*2nd Part: Ally battleship is defeated
'''Skill Point:''' Destroy the Bairal Jinn within six turns. '''Secret Requirements:''' '''Unit Acquisition:'''

|'''Victory Condition:''' (1)(2) Defeat all enemies '''Defeat Condition:''' (1) Ally battleship is defeated; Drowa Zan is defeated, Ally battleship is defeated(2) '''Skill Point:''' All Buff Clan units survive the stage. '''Secret Requirements:''' '''Unit Acquisition:'''

|}
 

==Stages 59 - END==
{| width="100%"
|-
| colspan="2" class="fc-std-sc" |'''第５９話：果てしなき流れの果てに Scenario 59 - At the End of the Unending Flow'''

|-
| colspan="2" |'''Victory Condition:'''
*1st Part: Reach the 11th turn
*2nd Part: Defeat all enemies, 6th turn is reached
'''Defeat Condition:'''
*1st Part: Ally battleship is defeated, Any enemy enters the designated area
*2nd Part: Any enemy enters the designated area, Ally battleship is defeated, Noriko or Jung are defeated
'''Skill Point:''' Defeat all enemies within 5 turns. '''Secret Requirements:''' '''Unit Acquisition:'''

|- class="fc-route-h"
| width="50%" |'''Normal Ending - 56 Skill Points or less, OR turn count 421 or more'''
| width="50%" |'''Good Ending - 57 Skill Points or more AND turn count 420 or less'''

|-
| class="fc-route1" |'''最終話: 終焉の銀河 Final Scenario - A Galaxy of Death'''
| class="fc-route3" |'''最終話: 今遥か遠い彼方… Final Scenario - Now, The Faraway Yonder'''

|-
|'''Victory Condition:''' (1) ??? is destroyed; (2) Kaiser Ephres is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated '''Secret Requirements:''' '''Unit Acquisition:'''

|'''Victory Condition:''' (1) ??? is destroyed; (2)(3) Kaiser Ephres is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated; (3) Irui is defeated '''Secret Requirements:''' '''Unit Acquisition:'''
*Nashim Gan Eden (Irui)

|}

Super Robot Wars/Alpha 3/Flow Chart

2023-06-10T18:14:37Z

KomodoWork: /* Stages 45 - 48 */

Units and Pilots in Black join your team. 
Units and Pilots in Orange are available for that stage, then leave. 
Units and Pilots in Blue have special requirements. Check the [[../Secrets|Secrets]] page for more details. 
Units and Pilots in Red previously joined, but from this point, are rendered unusable. Those lost permanently are marked so, while others rejoin later on. 
Information in Green are upgrades for units already in your party.

==Stages 01 - 18==
{| width="100%"
|- class="fc-route-h"
| width="25%" |'''Touma Route'''
| width="25%" |'''Kusuha Route'''
| width="25%" |'''Cobray Route'''
| width="25%" |'''Selena Route'''

|-
| class="fc-route1" |'''第１話：闘志、炎に燃ゆる Scenario 1 - Within the Flames, Fighting Spirit Rises'''
| class="fc-route2" |'''第１話：出撃！鋼の龍虎 Scenario 1 - Launch! Dragon and Tiger of Steel'''
| class="fc-route3" |'''第１話：虚空からの転生 Scenario 1 - Reincarnated from the Void'''
| class="fc-route4" |'''第１話：シークレット・ミッション Scenario 1 - Secret Mission'''

|-
|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Any allied unit is defeated '''Skill Point:''' Defeat all enemies in 3 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Raioh (Touma)
*GaoGaiGar (Guy)
*Goldymarg (Goldymarg)
*HyoRyu (HyoRyu)
*EnRyu (EnRyu)

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Any allied unit is defeated '''Skill Point:''' Defeat all enemies in 2 turns '''Secret Requirements:'''
*Bullet
**You must be playing as Kusuha to recruit Bullet.
'''Unit Acquisition:'''
*Gouryu Kai (Kusuha)
*Raikou Kai (Bullet)
*Mazinkaiser (Kouji)
*Diana A (Sayaka)
*Shin Getter (Ryoma, Hayato, Benkei)
*Lady Command (Michiru)

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' (1) Werkbau is defeated; (2) Werkbau is defeated, ally battleship is defeated '''Skill Point:''' Defeat all enemies in 5 turns after enemy reinforcements show up '''Secret Requirements:'''
*Arado and Seolla
**You must be playing as Cobray to recruit Arado and Seolla.
'''Unit Acquisition:'''
*Werkbau (Cobray)
*Nu Gundam (Amuro)
*Ra Cailum (Bright, Torres)
*MP Nu Gundam (Kayra)
*Jegan (Katz)
*Incom & Funnel parts for MP Nu Gundam

|'''Victory Condition:''' (1) All enemies except Salamis Kai shot down; (2) R-Gun Powered shot down '''Defeat Condition:''' (1) Selena shot down, Salamis Kai shot down; (2) Selena shot down '''Skill Point:''' Defeat all enemies except the Salamis Kai in 4 turns '''Secret Requirements:'''
*Ibis and Slay
**You must be playing as Selena to recruit Ibis and Slay.
'''Unit Acquisition:'''
*AS Soleares (Selena, Elma)
*Albion (Synapse, Paserov)
*GP03 Dendrobium (Kou)
*GM Cannon II (Keith)
*GM Custom (Burning)
*GM Custom (Bate)
*GM Custom (Monsha)
*GM Cannon II (Adel)
*Zeta Gundam (Kamille)
*Re-GZ BWS (Four)
*Methuss (Fa)
*Super Gundam (Emma)
*Armed Fortress Orchis parts for Gundam Stamen
*G Defensor parts for Gundam Mk-II

|-
| class="fc-route1" |'''第２話: さらばGGG、さらば勇者 Scenario 2 - Farewell, GGG! Farewell, Braves!'''
| class="fc-route2" |'''第２話: 新たなる侵略者！立ち上がれV Scenario 2 - New Invaders! Rise Up, V!'''
| class="fc-route3" |'''第２話: 血の狼煙 Scenario 2 - Beacon Fire of Blood'''
| class="fc-route4" |'''第２話: フラッシュ・デイ Scenario 2 - Flash Day'''

|-
|'''Victory Condition:''' Defeat all enemies; Defeat ZX-01 '''Defeat Condition:''' Any allied unit is defeated '''Skill Point:''' Defeat the 4 Zonders in 2 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*GaoGaiGar (Guy)
*J-Der (J, Tomoro)
*Great Mazinger (Tetsuya)
*Venus A (Jun)
*Boss Borot (Boss, Nuke, Mucha)
*Kotetsu Jeeg (Jeeg)
*Big Shooter (Miwa)

|'''Victory Condition:''' (1) Defeat all enemies, (2) Defeat Dangel '''Defeat Condition:''' (1) Hyouma defeated (2) Any Allied Unit is defeated '''Skill Point:''' Defeat all enemies in 3 turns, do not lose any Federation Army squads '''Secret Requirements:''' '''Unit Acquisition:'''
*Combattler V (Hyoma, Juzo, Daisaku, Chizuru, Kosuke)
*Jegan (Federation Soldier) x 3

|'''Victory Condition:''' (1) Defeat the Magellan Kai-class Battleship (2) Defeat the Magellan Kai-class Battleship and Nuclear Missiles '''Defeat Condition:''' (1) Any ally unit is defeated (2) Nuclear Missiles reach the marked area on the map '''Skill Point:''' Defeat the enemy missiles and battleship in 7 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Clop-class (Federation Captain)
*Wildfalken (Seolla)
*MP Nu Gundam (Cobray)
*ZZ Gundam (Judau)
*Re-GZ BWS (Roux)
*Albion (Synapse, Paserov)
*GP03 Dendrobium (Kou)
*GM Cannon II (Keith)
*GM Custom (Burning)
*GM Custom (Bate)
*GM Custom (Monsha)
*GM Cannon II (Adel)
*Zeta Gundam (Kamille)
*Re-GZ BWS (Four)
*Methuss (Fa)
*Super Gundam (Emma)
*Armed Fortress Orchis parts for Gundam Stamen
*G Defensor Parts for Gundam Mk-II

|'''Victory Condition:''' Defeat any enemy battleship '''Defeat Condition:''' (1) Allied battleship is defeated; (2) Allied battleship is defeated, Selena is defeated '''Skill Point:''' Defeat the enemy battleship in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*ZZ Gundam (Judau)
*Re-GZ BWS (Roux)
*Nu Gundam (Amuro)
*Ra Cailum (Bright)
*Jegan (Katz)
*MP Nu Gundam (Keyra)
*AS Soleares (Selena, Elma)
*Incom & Funnel parts for MP Nu Gundam

|-
| colspan="4" class="fc-std-sc" |'''第３話: 逆襲！機界31原種 Scenario 3 - Counterattack! The 31 Machine Primevals!'''

|-
| colspan="4" |'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' (1) Ally battleship is defeated, One of the Machine Primevals reaches the edge of the map; (2) Ally battleship is defeated, One of the Machine Primevals reaches the edge of the map, J is defeated '''Skill Point:''' Defeat all enemies in 6 turns '''Secret Requirements:''' '''Unit Acquisition (Touma & Kusuha):'''
*J-Ark (J, Tomoro)
*Nu Gundam (Amuro)
*Ra Cailum (Bright, Torres)
*Jegan (Katz)
*MP Nu Gundam (Keyra)
*Albion (Synapse, Paserov)
*GP03 Dendrobium (Kou)
*GM Cannon II (Keith)
*GM Custom (Burning)
*GM Custom (Bate)
*GM Custom (Monsha)
*GM Cannon II (Adel)
*Zeta Gundam (Kamille)
*Re-GZ BWS (Four)
*Methuss (Fa)
*Super Gundam (Emma)
*Incom & Funnel parts for MP Nu Gundam
*Armed Fortress Orchis parts for Gundam Stamen
*G Defensor Parts for Gundam Mk-II
'''Unit Acquisition (Cobray & Selena):'''
*J-Ark (J, Tomoro)
*Mazinkaiser (Kouji)
*Diana A (Sayaka)
*Great Mazinger (Tetsuya)
*Venus A (Jun)
*Combattler V (Hyoma, Juzo, Daisaku, Chizuru, Kosuke)
*Koutetsu Jeeg (Jeeg)
*Big Shooter (Miwa)
*Shin Getter (Ryoma, Hayato, Benkei)
*Lady Command (Michiru)

|-
| colspan="4" class="fc-std-sc" |'''第４話：地獄門、開く Scenario 4 - The Gates of Hell Open'''

|-
| colspan="4" |'''Victory Condition:'''
*1st Part: Allied Battleship reaches the escape point in 5 turns, All Enemies are defeated in 5 turns
*2nd Part: Defeat all enemies
'''Defeat Condition:'''
*1st Part: Allied Battleship is defeated, Turn 6 starts
*2nd Part: SRX is defeated
'''Skill Point:''' Defeat all enemies in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*SRX (Damaged) (Ryuusei, Rai, Aya)

|-
| colspan="4" class="fc-std-sc" |'''第５話: 地球圏絶対防御線 Scenario 5 - The Earth Sphere’s Absolute Defense Line'''

|-
| colspan="4" |'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' (1) Ally battleship is defeated (2) Any allied unit is defeated '''Skill Point:''' Clear the stage in 6 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Mobieus Zero (Mwu)
*All Char's Counter Attack, Stardust Memory, and Zeta Gundam units are lost <ul><li>Nu Gundam(Amuro)</li><li>Ra Cailum (Bright, Torres)</li><li>MP Nu Gundam (Keyra)</li><li>Albion (Synapse, Paserov)</li><li>GP03 Dendrobium (Kou)</li><li>GM Cannon II (Keith)</li><li>GM Custom (Burning)</li><li>GM Custom (Bate)</li><li>GM Custom (Monsha)</li><li>GM Cannon II (Adel)</li><li>Zeta Gundam (Kamille)</li><li>Re-GZ BWS (Four)</li><li>Methuss (Fa)</li><li>Super Gundam (Emma)</li><li>Jegan (Katz)</li></ul>

|- class="fc-route-h"
|'''Touma Route''' Great Mazinger, Venus A, Boss Borot Steel Jeeg, Big Shooter
|'''Kusuha Route''' Getter Robo G, Lady Command Mazinger Z, Diana A Combattler V
|'''Cobray Route''' ZZ Gundam, ReGZ (BWS) Mobieus Zero
|'''Selena Route'''
|-
| class="fc-route1" |'''第６話：平和、遥か遠く Scenario 6 - A Faraway Peace'''
| class="fc-route2" |'''第６話：北米戦線、異常アリ Scenario 6 - Abnormalities on the North American Front'''
| class="fc-route3" |'''第６話：GUNDAM出撃 Scenario 6 - Gundam, Sortie'''
| class="fc-route4" |'''第６話：ザ・ビギニング Scenario 6 - The Beginning'''

|-
|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Any ally is defeated '''Skill Point:''' Defeat all enemies in 5 turns; Defeat the Yamata no Orochi last '''Secret Requirements:''' '''Unit Acquisition:'''
*GaiGar (Gai)
*Mic Sounders XIII (Mic Sounders XIII)

|'''Victory Condition:''' (1) Ally reaches the designated area; (2) Defeat all enemies '''Defeat Condition:''' Any ally defeated '''Skill Point:''' Reach target location without engaging in combat '''Secret Requirements:''' '''Unit Acquisition:'''
*Mazinkaiser → Mazinger Z (Kouji)
*Shin Getter Robo → Getter Robo G (Ryoma, Hayato, Benkei) 
*Dancouga (Shinobu, Sara, Masato, Ryo)

|'''Victory Condition:'''
*1st Part: Sigu is defeated, Vesalius is defeated
*2nd Part: Defeat all enemies 
'''Defeat Condition:'''
*1st Part: Any ally is defeated
*2nd Part: Any ally is defeated 
'''Skill Point:''' Accomplish either objective in 4 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Clop Class Battleship (Federation Officer)
*Wing Gundam Zero Kai (Heero)
*Gundam Deathscythe Hell Kai (Duo)
*Gundam Sandrock Kai (Quatre)
*Taurus (Hilde)
*Strike Gundam (Kira)

|'''Victory Condition:''' (1) AS Soleares reaches the designated point in 4 turns; (2) Defeat all enemies '''Defeat Condition:''' (1) Begin turn 5 without meeting victory conditions, Any ally is defeated; (2) Any ally is defeated '''Skill Point:''' Defeat all enemies in 4 turns and get the AS Soleares to the target square '''Secret Requirements:''' '''Unit Acquisition:'''
*CGUE (Rau)
*GINN (ZAFT Soldier) x 2
*Vesarius (Ades)

|-
| class="fc-route1" |'''第７話：燃えろ宙！妖花フローラの挑戦 Scenario 7 - Space Burns! The Enchanting Flora’s Challenge!'''
| class="fc-route2" |'''第７話：怒りの獣、野生の咆哮 Scenario 7 - The Wild Roar of the Raging Beast'''
| class="fc-route3" |'''第７話：崩壊の大地 Scenario 7 - Collapsing Land'''
| class="fc-route4" |'''第７話：ワンズ・ジャスティス Scenario 7 - One’s Own Justice'''

|-
|'''Victory Condition:''' 
*1st Part: Defeat all enemies
*2nd Part: Defeat all enemies
'''Defeat Condition:''' 
*1st Part: Any ally defeated
*2nd Part: Any ally defeated
'''Skill Point:''' Defeat all enemies in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*AnRyu (AnRyu)
*KouRyu (KouRyu)

|'''Victory Condition:''' (1) Defeat all enemies; (2) Defeat Dangel '''Defeat Condition:''' Any ally is defeated '''Skill Point:''' Defeat all Zubanzas, Boazan Flying Saucers, and Red Baloms within 4 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Black Wing (Alan)

|'''Victory Condition:''' (1) Defeat all enemies; (2) Archangel reaches the designated point, Defeat all enemies '''Defeat Condition:''' (1) Mwu is defeated; (2) Ally battleship is defeated, Kira or Mwu are defeated '''Skill Point:''' Defeat all enemies in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Strike Gundam (Kira)
*Archangel (Murrue, Natarle)
*Aile, Sword and Launcher Striker packs for Strike Gundam

|'''Victory Condition:''' Any ally reaches the designated point '''Defeat Condition:''' Any ally is defeated '''Skill Point:''' Defeat all enemies in 5 turns and get an allied unit to the target square '''Secret Requirements:''' '''Unit Acquisition:'''
*Altron Gundam (Wufei)
*Gundam Heavyarms Kai (Trowa)
*CGuE (Rau)
*Vesarius (Ades)
*Aegis Gundam (Athrun)
*Blitz Gundam (Nicol)
*Buster Gundam (Dearka)
*Duel Gundam (Yzak)

|-
| class="fc-route1" |'''第８話：立ち上がれ！勇気ある者達 Scenario 8 - Stand Up, People of Courage!'''
| class="fc-route2" |'''第８話：輝け！不死身の勇者 Scenario 8 - Shine, Undying Hero!'''
| class="fc-route3" |'''第８話：誘う声 Scenario 8 - An Inviting Voice'''
| class="fc-route4" |'''第８話：インビジブル・イントルーダー Scenario 8 - Invisible Intruder'''

|-
|'''Victory Condition:''' (1) Defeat all enemies; (2) ZX-02 is defeated '''Defeat Condition:''' (1) Any ally is defeated; (2) Gai is defeated, J is defeated '''Skill Point:''' Defeat all enemies in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*GaiGar → GaoGaiGar
*Mic Sounders XIII gains "Disc P", "Disc M", and "Disc X" attacks
*Goldymarg (Goldymarg)
*HyoRyu (HyoRyu)
*EnRyu (EnRyu)
*Big Volfogg (Big Volfogg)

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' (1) Any ally is defeated; (2) Akira is defeated '''Skill Point:''' Defeat the Bramble (retreats at 4000HP (E) / 6000HP (N) / 8000HP (H)) '''Secret Requirements:''' '''Unit Acquisition:'''
*Raideen (Akira)
*Bluegar (Jinguji, Mari)

|'''Victory Condition:'''
*1st Part: (1) Vesalius is defeated; (2) Defeat all enemies
*2nd Part: (1) Defeat all enemies; (2) Defeat all enemies except Valk Baal 
'''Defeat Condition:'''
*1st Part: Ally battleship is defeated, Seolla or Cobray are defeated
*2nd Part: Any ally is defeated 
'''Skill Point:''' Defeat Aegis, Duel, Buster, and Blitz Gundams in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Zeta Gundam (Kamille)
*Re-GZ BWS (Four)
*Methuss (Fa)
*Super Gundam (Emma)
*Ra Cailum (Bright, Torres)
*MP Nu Gundam (Cobray)
*Werkbau (Cobray)
*G Defensor parts for Gundam Mk-II

|'''Victory Condition:''' Reach turn 6 '''Defeat Condition:''' Any ally is defeated '''Skill Point:''' Defeat all the Jegans '''Secret Requirements:''' '''Unit Acquisition:'''
*CGuE (Rau)
*Vesarius (Ades)
*Aegis Gundam (Athrun)
*Blitz Gundam (Nicol)
*Buster Gundam (Dearka)
*Duel Gundam (Yzak)

|-
| class="fc-route1" |'''第９話：内なる修羅 Scenario 9 - Demons of War Within'''
| class="fc-route2" |'''第９話：再会！ニューヨーク解放戦 Scenario 9 - Reunion! The Battle to Retake New York'''
| class="fc-route3" |'''第９話：正義の在処 Scenario 9 - Where Justice Can Be Found'''
| class="fc-route4" |'''第９話：アベンジャー Scenario 9 - Avenger'''

|-
|'''Victory Condition:''' (1) Defeat all enemies; (2) Defeat Raioh '''Defeat Condition:''' (1) Any ally defeated; (2) Sanger is defeated '''Skill Point:''' Defeat the Bramble in 4 turns (retreats at 4000HP (E) / 6000HP (N) / 8000HP (H)) '''Secret Requirements:''' '''Unit Acquisition:'''
*Dygenguar (Sanger)
*Huckebein Mk-III Trombe (Ratsel)
*Raideen (Akira)
*Bluegar (Jingunji, Mari)
*Mazinger Z (Kouji)
**Mazinger Z (Kouji) and Great Mazinger (Tetsuya) gain the "Double Mazinger Blade" and "Double Burning Fire" combination attacks
*Diana A (Sayaka)
*Getter Robo G (Ryoma, Hayato, Benkei)
*Lady Command (Michiru)
*Combattler V (Hyoma, Juzo, Daisaku, Chizuru, Kosuke)

|'''Victory Condition:''' (1) Defeat all enemies; (2) Dancouga reaches the designated point; (3) Defeated Deathgaia, Dangel, and Warchamedes '''Defeat Condition:''' (1) Shinobu, Kusuha, or Bullet are defeated; (2) Shinobu, Kusuha, Bullet, or Alan are defeated; (3) Alan is defeated '''Skill Point:''' Clear the map in 8 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Black Wing (Alan)
*Dygenguar (Sanger)
*Huckebein Mk-III Trombe (Ratsel)

|'''Victory Condition:''' (1) Vesalius is defeated; Reduce the Muge Battleship under 2000 HP before it reaches the edge of the map '''Defeat Condition:''' (1) Ally battleship is defeated; (2) Muge Battleship reaches the western edge of the map '''Skill Point:''' Defeat all enemies before reducing the Muge Mothership's HP below 2000 or defeating it '''Secret Requirements:''' '''Unit Acquisition:'''

|'''Victory Condition:''' (1) Reduce the Archangel's HP to 50% or less, Defeat all enemies besides the Archangel; (2) Reduce the Varuch Ishar to 4000 HP or less. '''Defeat Condition:''' Any ally is defeated '''Skill Point:''' Defeat the Varuch Ishar (flees at 4000 HP) '''Secret Requirements:''' '''Unit Acquisition:'''
*CGuE (Rau)
*Vesarius (Ades)
*Aegis Gundam (Athrun)
*Blitz Gundam (Nicol)
*Buster Gundam (Dearka)
*Duel Gundam (Yzak)

|-
| class="fc-route1" |'''第１０話：激震の地底帝国 Scenario 10 - Tremors in the Underground Empire'''
| class="fc-route2" |'''第１０話：龍を喰らうもの Scenario 10 - That Which Devours the Dragon'''
| class="fc-route3" |'''第１０話：消えていく光 Scenario 10 - The Fading Light'''
| class="fc-route4" |'''第１０話：グッバイ・フレンズ Scenario 10 - Goodbye, Friends'''

|-
|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' All allies defeated, Science Fortress Lab destroyed '''Skill Point:''' Clear the map without the Science Fortress Lab taking damage '''Secret Requirements:''' '''Unit Acquisition:'''
*Raioh loses the "System LIOH" ability
*Raioh gains the "Rising Meteor" attack
*Dygenguar (Sanger)
*Huckebein Mk-III Trombe (Ratsel)

|'''Victory Condition:''' (1) Sanger is defeated; (2)(3) Defeat all enemies; (4)(5) ZX-02 is defeated '''Defeat Condition:''' (1) Bullet is defeated; (2) Sanger or Rastel are defeated; (3) Any ally is defeated; (4) Guy, Sanger, or Rastel are defeated; (5) Guy, J, Sanger, or Rastel are defeated '''Skill Point:''' Reduce Shin RyuOuKi to below 10000 HP within 3 turns of its arrival '''Secret Requirements:''' '''Unit Acquisition:'''
*Dygenguar (Sanger)
*Huckebein Mk-III Trombe (Ratsel)
*GaiGar (Guy)
*GaoGaiGar (Guy)
*Mic Sounders XIII (Mic Sounders XIII)
*Goldymarg (Goldymarg)
*HyoRyu (HyoRyu)
*EnRyu (Enryu)
*Volfogg (Volfogg)
*Great Mazinger (Tetsuya)
*Venus A (Jun)
*Boss Borot (Boss, Mucha, Nuke)
*Kotetsu Jeeg (Jeeg)
*Big Shooter (Miwa)
*Stealth Gao II parts for GaoGaiGar
*Gunbot parts for Volfogg

|'''Victory Condition:''' (1) Reduce the Blitz Gundam to under 7000HP; (2) The Gamow is defeated; (3) The Gamow is defeated and Imperial Guard are defeated '''Defeat Condition:''' (1)(2) Any ally is defeated; (3) Ally battleship is defeated '''Skill Point:''' Defeat the Gamow (retreats at 4000HP (E) / 6000HP (N) / 8000HP (H)) '''Secret Requirements:''' '''Unit Acquisition:'''
*Qubeley Mk-II (Puru)
*Qubeley Mk-II (Puru Two)
*Hyaku Shiki (Beecha)
*Gundam Mk-II (Elle)
*Jegan (Mondo)
*Megarider (Iino)
*YF-19 (Isamu)
*YF-21 (Guld)

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' (1) Any ally is defeated; (2) Ally battleship is defeated; (3) Ally battleship is defeated, Isamu or Guld are defeated '''Skill Point:''' Clear the map in 6 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Zeta Gundam (Kamille)
*Methuss (Fa)
*ReGZ (Four)
*Super Gundam (Emma)
*Mobius Zero (Mwu)
*Wing Gundam Zero Kai (Heero)
*Gundam Sandrock Kai (Quatre)
*Gundam Deathscythe Hell Kai (Duo)
*Taurus (Hilde)
*ZZ Gundam (Judau)
*ReGZ BWS (Roux)
*Qubeley Mk-II (Puru)
*Qubeley Mk-II (Puru Two)
*Hyaku Shiki (Beecha)
*Gundam Mk-II (Elle)
*Jegan (Mondo)
*Megarider (Iino)
*YF-19 (Isamu)
*YF-21 (Guld)

|-
| class="fc-route1" |'''第１１話：戦場の邂合、そして決別 Scenario 11 - An Battlefield Encounter, and Then a Departure'''
| class="fc-route2" |'''第１１話：新たなる人類 Scenario 11 - A New Mankind'''
| class="fc-route3" |'''第１１話：君と戦場で Scenario 11 - On the Battlefield with You'''
| class="fc-route4" |'''第１１話：パワー・ジャンクション Scenario 11 - Power Junction'''

|-
|'''Victory Condition:''' (1) Defeat all enemies; (2) Defeat Vesalius '''Defeat Condition:''' Ally battleship is defeated, Kira or Mwu are defeated '''Skill Point:''' Defeat all enemies in 7 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Archangel (Murrue)
*Strike Gundam (Kira)
*Moebius Zero (Mwu)
*Stealth Gao II Parts for GaoGaiGar
*Aile, Sword, and Launcher Striker packs for Strike Gundam

|'''Victory Condition:''' (1) Defeat all enemies; (2) Vesalius is defeated '''Defeat Condition:''' (1) Ally battleship is defeated, Kira or Mwu are defeated; (2) Ally battleship is defeated '''Skill Point:''' Defeat all enemies in 7 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Strike Gundam (Kira)
*Mobeius Zero (Mwu)
*Archangel (Murrue, Natarle)
*YF-19 (Isamu)
*YF-21 (Guld)
*Aile, Sword, and Launcher Striker packs for Strike Gundam

|'''Victory Condition:''' (1) Defeat all enemies (2) ZX-02 is defeated '''Defeat Condition:''' (1) Kira is defeated; (2) Any ally is defeated '''Skill Point:''' Defeat all enemies in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Wildburger (Arado)
*Great Mazinger (Tetsuya)
*Venus A (Jun)
*Boss Borot (Boss)
*Dancouga (Shinobu, Sarah, Masato, Ryo)
*Raideen (Akira)
*Bluegar (Jingunji)
*Mazinger Z (Kouji)
*Diana A (Sayaka)
*Getter Robo G (Ryoma, Hayato, Benkei)
*Lady Command (Michiru)
*Star Gaogaigar (Gai)
*Goldymarg (Goldymarg)
*Mic Sounders the 13th (Mic)
*Hyoryu (Hyoryu)
*Enryu (Enryu
*Big Volfogg (Volfogg)

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Defeat all enemies in 7 turns '''Secret Requirements:''' '''Unit Acquisition:'''

|-
| class="fc-route1" |'''第１２話：守るべきモノ Scenario 12 - What You Must Protect'''
| class="fc-route2" |'''第１２話：別れの宇宙 Scenario 12 - Farewells in Space'''
| class="fc-route3" |'''第１２話：ディーンの火 Scenario 12 - The Flames of Deen'''
| class="fc-route4" |'''第１２話：コンクルージョン Scenario 12 - Conclusion'''

|-
|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' All enemies defeated '''Skill Point:''' Defeat all enemies in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Gundam Wing Zero (Heero)
*Gundam Deathscythe Hell Kai (Duo)
*Gundam Sandrock Kai (Quatre)
*Gundam Heavyarms Kai (Trowa)
*Altron Gundam (Wufei)
*Taurus (Hilde)
*Zeta Gundam (Kamille)
*Re-GZ BWS (Four)
*Methuss (Fa)
*Gundam Mk-II (Emma)
*ZZ Gundam (Judau)
*Qubeley Mk-II (Puru)
*Qubeley Mk-II (Puru Two)
*Hyaku Shiki (Beecha)
*Gundam Mk-II (Elle)
*Jegan (Mondo)
*Megarider (Iino)
*YF-19 (Isamu) (After stage)
*YF-21 (Guld) (After stage)
*G Defensor parts for Gundam Mk-II

|'''Victory Condition:''' (1) Defeat all enemies; (2) Defeat Shin RyoOhKi; (3) Defeat the Imperial Guard '''Defeat Condition:''' (1)(2) Any ally is defeated; (3) Ally battleship is defeated '''Skill Point:''' Defeat Shin RyuOhKi before Victory Conditions are met '''Secret Requirements:''' '''Unit Acquisition:'''
*Gundam Wing Zero Kai (Heero)
*Gundam Deathscythe Hell Kai (Duo)
*Gundam Sandrock Kai (Quatre)
*Gundam Heavyarms Kai (Trowa)
*Altron Gundam (Wufei)
*Taurus (Hilde)
*Zeta Gundam (Kamille)
*Re-GZ BWS (Four)
*Methuss (Fa)
*Gundam Mk-II (Emma)
*ZZ Gundam (Judau)
*Qubeley Mk-II (Puru)
*Qubeley Mk-II (Puru Two)
*Hyaku Shiki (Beecha)
*Gundam Mk-II (Elle)
*Jegan (Mondo)
*Megarider (Iino)
*G Defensor parts for Gundam Mk-II

|'''Victory Condition:''' (1) Bramble, Magnum, and Zangaioh are defeated; (2) Defeat all enemies; (3) Defeat Valk Baal '''Defeat Condition:''' (1) Ally battleship is defeated, Arado is defeated; (2) Cobray, Arado or Seolla are defeated; (3) Cobray, Viletta, Sanger, or Rastel are defeated '''Skill Point:''' Clear the map in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Werkbau gains the "Axion Buster" attack
*Gundam Heavyarms Kai (Trowa)
*Altron Gundam (Wufei)
*Dygenguar (Sanger)
*Huckebein Mk-III Trombe (Ratsel)
*R-GUN Powered (Viletta)

|'''Victory Condition:''' (1)(2) ZX-08 is defeated; (3) Varuch Ishar is defeated '''Defeat Condition:''' (1) Ally battleship is defeated, (2) Ally battleship is defeated, J is defeated; (3) Ally battleships is defeated, Selena, Viletta, Sanger, or Rastel are defeated '''Skill Point:''' Defeat ZX-02 in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*J-ARK (J, Tomoro)
*R-GUN Powered (Viletta)
*Dygenguar (Sanger)
*Huckebein Mk-III Trombe (Ratsel)
*Vegalion (Slay)

|-
| colspan="4" class="fc-std-sc" |'''第１３話：もう一度、自らの足で Scenario 13 - Once Again, On Your Feet'''

|-
| colspan="4" |'''Victory Condition:''' ZX-06 is defeated '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Clear the map in 6 turns; Defeat all other enemies before ZX-06 '''Secret Requirements:''' '''Unit Acquisition:'''
*Evangelion Unit 0 Custom (Rei)
*Evangelion Unit 1 (Shinji)
*Evangelion Unit 2 (Asuka)

|-
| colspan="4" class="fc-std-sc" |'''第１４話：オペレーション・ハルパー Scenario 14 - Operation Harper'''

|-
| colspan="4" |'''Victory Condition:''' Reduce Hermoz Ehad's HP to below 120000HP (E) / 90000HP (N) / 80000HP (H) '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Achieve the victory condition in 7 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*HyoRyu (HyoRyu)
*EnRyu (EnRyu)

|-
| colspan="4" class="fc-std-sc" |'''第１５話：遥かなる凱歌 Scenario 15 - A Faroff Victory Song'''

|-
| colspan="4" |'''Victory Condition:''' Defeat the Combine Primeval '''Defeat Condition:''' Ally Battleship is defeated, J is defeated '''Skill Point:''' Defeat all enemies in 7 turns, leaving the combined Primeval for last '''Secret Requirements:''' '''Unit Acquisition:'''
*J-Ark (J, Tomoro)
*ALL units are unavailable until clearing Scenario 18

|-
| colspan="4" class="fc-std-sc" |'''第１６話：導かれる魂、銀河で Scenario 16 - Souls Guided by the Galaxy'''

|-
| colspan="4" |'''Victory Condition:'''
*1st Part: Defeat all enemies
*2nd Part: Defeat all enemies
'''Defeat Condition:'''
*1st Part: Ideon is defeated
*2nd Part: Any ally is defeated
'''Skill Point:''' Defeat all enemies in 4 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Ideon (Cosmo, Kasha, Bess → Moera)
*VF-17S Nightmare (Kinryu)
*VF-17D Nightmare (Gamlin)
*VF-17D Nightmare (Docker)
*Battle 7 (Max, Exedore, Miho, Sally)
*Soloship (Bess)

|-
| colspan="4" class="fc-std-sc" |'''第１７話：ディスコード・ハーモニー Scenario 17 - Discord / Harmony'''

|-
| colspan="4" |'''Victory Condition:''' (1)(2) Defeat the Zig Mac; (3) Defeat FZ-109F Elgarthorn '''Defeat Condition:''' (1) Any ally is defeated; (2) Any ally is defeated, Zig Mac moves next to the Soloship (3) '''Skill Point:''' Meet victory the condition in 4 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Battle 7 can now transform into "Enhanced Attack Mode"
*VF-17D Nightmare (Docker)

|-
| colspan="4" class="fc-std-sc" |'''第１８話：銀河流浪 Scenario 18 - Galactic Wandering'''

|-
| colspan="4" |'''Victory Condition:'''
*1st Part: Defeat FZ-109F Elgarthorn
*2nd Part: Defeat Zig Mac
'''Defeat Condition:'''
*1st Part: Any ally is defeated
*2nd Part: Any ally is defeated
'''Skill Point:''' Meet victory conditions in 3 turns '''Secret Requirements:'''
*Duel Gundam
**Take the Earth Route
*VF-1J S Valkyrie
**Take the Earth Route
*LaGOWE
**Take the Earth Route
'''Unit Acquisition:'''
*VF-17D Nightmare (Physica)
*VF-17S (Kinryu), VF-17D (Gamlin), and VF-17D (Physica) gain the "Diamond Force Attack" combination Attack
*Ideon gains the "Omnidirectional Missile" attack
*All Ideon and Macross 7 units are lost <ul><li>Ideon (Cosmo, Kasha, Moera)</li><li>Soloship (Bess)</li><li>Battle 7 (Max, Exedore, Miho, Sally)</li><li>VF-17S Nightmare (Kinryu)</li><li>VF-17D Nightmare (Physica)</li><li>VF-17D Nightmare (Gamlin)</li>

|}
 

==Stages 19 - 33==
{| width="100%"
|- class="fc-route-h"
| width="50%" |'''Descend to Earth''' Gundam 0083 Gundam Z ZZ Gundam Char's CounterAttack Gundam Wing Gundam SEED Macross 7 Macross Plus Evangelion
| width="50%" |'''Mount a Lunar offensive''' GaoGaiGar Ideon Mazinger (Z, Great) Getter Robo Steel Jeeg Combattler V Gaiking Raideen Dancouga GoShogun

|-
| class="fc-route1" |'''第１９話：宇宙に降る星 Scenario 19 - Stars Falling in Space'''
| class="fc-route3" |'''第１９話：悪夢への招待状 Scenario 19 - A Written Invitation to a Nightmare'''

|-
|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated, Kira is defeated '''Skill Point:''' Destroy all enemies in 6 turns '''Secret Requirements:'''
*Duel Gundam
**Destroy Yzak.
'''Unit Acquisition:'''
*Nu Gundam (Amuro)
*Jegan (Katz)
*MP Nu Gundam (Kayra)
*Incom and Fin Funnel parts for MP Nu Gundam
*Kira unlocks the SEED pilot skill
*Skygrasper
*Ra Cailum (Bright, Torres)

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Destroy the Muge battleship in 6 turns (retreats at 6000HP (E) / 8000HP (N) / 10000 HP (H)) '''Secret Requirements:''' 
'''Unit Acquisition:'''
*Daiku Maryu (Pete, Midori)
*Gaiking (Sanshiro)
*Skylar (Fan Li)
*Bazolar (Yamagatake)
*Nesser (Bunta)

|-
| class="fc-route1" |'''第２０話：強襲、砂漠の虎 Scenario 20 - Assault of the Desert Tiger'''
| class="fc-route3" |'''第２０話：異邦人達の帰還 Scenario 20 - The Foreigners Return'''

|-
|'''Victory Condition:''' Defeat the Lesseps '''Defeat Condition:''' Ally battleship is defeated, Kira is defeated '''Skill Point:''' Defeat the Lesseps in 6 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Kira unlocks the SEED pilot skill
*Albion (Synapse, Paserov)
*Gundam Stamen (Kou)
*GM Cannon II (Keith)
*GM Custom (Burning)
*GM Custom (Bate)
*GM Custom (Monsha)
*GM Cannon II (Adel)
*Gundam GP01fb
*Armed Base Orchis parts for Gundam Stamen

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Destroy Helmut's Muge battleship in 4 turns (retreats at 6000HP (E) / 8000HP (N) / 10000 HP(H)) '''Secret Requirements:''' '''Unit Acquisition:'''
*Ideon (Cosmo, Kasha, Moera)
*Ideon gains the "Ideon Sword" and "Ideon Sword (MAP)" attacks
*Soloship (Bess, Hatari)

|-
| class="fc-route1" |'''第２１話：プリティ・デビル Scenario 21 - Pretty Devil'''
| class="fc-route3" |'''第２１話：裏切りの代償 Scenario 21 - The Cost of Betrayal'''

|-
|'''Victory Condition:'''
*1st Part: Gigil's ship is defeated
*2nd Part: Gigil's ship is defeated 
'''Defeat Condition:'''
*1st Part: Any ally is defeated
*2nd Part: Basara is defeated
'''Skill Point:''' Destroy Gigil before he moves adjacent to Sivil '''Secret Requirements:'''
*LaGOWE
**Waltfeld and Dacosta must both survive and get a combined total of 10 kills or more on the first half of the scenario.
*VF-1J
**Milia must get a total of 10 kills in the first half of the scenario.
'''Unit Acquisition:'''
*VF-17S Nightmare (Kinryu)
*VF-17D Nightmare (Gamlin)
*VF-17D Nightmare (Physica)
*VF-1J S Valkyrie (Milia)
*LaGOWE (Waldfelt)
*BuCUE (Dacosta)
*Skygrasper (Cagalli)
*VF-19 Kai Fire Valkyrie (Basara)
*VF-17S Nighmare (Milia)
*VF-1J S Valkyrie

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Any ally is defeated '''Skill Point:''' Destroy all enemies in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Goshogun (Shingo, Killy, Remi)
*Good Thunder (Sabranth)

|-
| class="fc-route1" |'''第２２話：砂塵の果て Scenario 22 - Beyond the Clouds of Sand'''
| class="fc-route3" |'''第２２話：発動する力、無限大 Scenario 22 - Infinite Activation Power'''

|-
|'''Victory Condition:''' (1) Defeat the Lesseps; (2) Waltfeld is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated '''Skill Point:''' Defeat the Lesseps in 5 turns '''Secret Requirements:'''
*LaGOWE
**Kira must destroy Waltfeld's LaGOWE while in SEED. (Kira has to activate SEED mode before the event that ends the stage.)
'''Unit Acquisition:'''
*Kira unlocks the SEED pilot skill

|'''Victory Condition:''' (1) Soloship reaches the computer facility; (2) Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Get the Soloship to the indicated area in 4 turns without it taking any damage '''Secret Requirements:''' '''Unit Acquisition:'''
*HyoRyu (HyoRyu)
*EnRyu (EnRyu)

|-
| class="fc-route1" |'''第２３話：エモーション・ハイ Scenario 23 - Emotion High'''
| class="fc-route3" |'''第２３話：決戦！地獄の月荒野 Scenario 23 - Decisive Battle in the Hellish Lunar Wilderness!'''

|-
|'''Victory Condition:''' (1) Defeat 2 Ghosts; (2) Defeat all enemies; (3) Basara sings to Sivil, All ZAFT forces are defeated '''Defeat Condition:''' (1) Ally battleship is defeated, Battle 7 is defeated; (2) Ally battleship is defeated, Battle 7 is defeated, Isamu or Guld are defeated; (3) Ally battleship is defeated, Isamu, Guld, or Basara are defeated '''Skill Point:''' Clear the map in 9 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*YF-19's "Full Volley" attacks gains +200 Attack power
*YF-19 and YF-21 gain the "Double Pinpoint Barrier Punch" combination attack
*Battle 7 (Max, Exedore, Miho, Sally)
*VF-19 Kai Fire Valkyrie (Basara)
*Mazinkaiser
*Shin Getter Robo

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Clear the map in 9 turns '''Secret Requirements:''' '''Unit Acquisition:'''

|-
| colspan="2" class="fc-std-sc" |'''第２４話：戦神の星で Scenario 24 - On the Planet of the War God'''

|-
| colspan="2" |'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' (1) Any ally is defeated; (2) Ally battleship is defeated '''Skill Point:''' Destroy all enemies in 3 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*VF-19 Kai Fire Valkyrie (Basara)
*VF-11 MAXL Kai (Mylene)
*VF-17 Kai Nightmare (Ray, Veffidas)
*Tallgeese III (Zechs)
*Taurus (Noin)
*Voltes V (Kenichi, Ippei, Daijiroh, Hiyoshi, Megumi)
*Daimos (Kazuya)
*Garuba FX-II (Kyoshiro, Nana)

|-
| colspan="2" class="fc-std-sc" |'''第２５話：選ばれし者、選びし者 Scenario 25 - Those Who Are Chosen, Those Who Choose'''

|-
| colspan="2" |'''Victory Condition:''' (1) Hermos is defeated; (2) Zifrud is defeated '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Clear the map in 8 turns '''Secret Requirements:''' '''Unit Acquisition:'''

|-
| colspan="2" class="fc-std-sc" |'''第２６話：かりそめの旅人 Scenario 26 - Transitory Traveler'''

|-
| colspan="2" |'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated, Temjin, Fei Yen, or Apharmd are defeated '''Skill Point:''' Destroy all enemies in 3 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Temjin 747J (Chief)
*Fei Yen the Knight (Fei)
*Apharmd The Hatter (The Hatter)

|-
| colspan="2" class="fc-std-sc" |'''第２７話：勇気ある者達の誓い Scenario 27 - The Oath of the Courageous'''

|-
| colspan="2" |'''Victory Condition:'''
*1st Part: Defeat all enemies
*2nd Part: (1) Defeat all enemies; (2) Defeat the Z-Master within (10 (E) / 7 (N) / 5 (H)) turns 
'''Defeat Condition:'''
*1st Part: Ally battleship is defeated, Gai is defeated
*2nd Part: (1) Ally battleship is defeated, Gai or J are defeated; (2) (10 (E) / 7 (N) / 5 (H)) turns have passed, Ally battleship is defeated, Gai or J are defeated 
'''Skill Point:''' Destroy all enemies in 7 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*J-Ark (J, Tomoro)

|-
| colspan="2" class="fc-std-sc" |'''第２８話：いつか星の海へ Scenario 28 - Someday, In the Sea of Stars'''

|-
| colspan="2" |'''Victory Condition:''' (1)(2) Defeat the Zonder Robo; (3) Defeat the Zonder Robo within 6 attacks from Star GaoGaiGar; (4)(5) Defeat all enemies '''Defeat Condition:''' (1) Galeon is defeated; (2) Ally battleship is defeated, Galeon is defeated; (3) Ally battleship or Gai are defeated, Zonder Robo is not defeated within 6 attacks from Star GaoGaiGar (4) Main Character is defeated; (5) Ally battleship is defeated '''Skill Point:''' Destroy the Zonuder Robo in 5 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Galeon (Galeon)
*Star GaoGaiGar/GaoGaiGar (Gai)
*YF-19 (Isamu)
*YF-21 (Guld)
*Battle 7 (Max)
*VF-17S Nightmare (Milia)
*VF-17D Nightmare (Gamlin)
*VF-17D Nightmare (Physica)
*VF-19 Kai Fire Valkyrie (Basara)
*VF-11 MAXL Kai (Mylene)
*VF-17 Kai Nightmare (Ray, Veffidas)
*HyoRyu (HyoRyu)
*EnRyu (EnRyu)
*Goldymarg (Goldymarg)
*Volfogg (Volfogg)
*Mic Sounders XIII (Mic Sounder XIII)
*Ideon (Cosmo, Kasha, Moera)
*Soloship (Bess, Hatari)
*Star GaoGaiGar (Guy, Choryujin, Goldymarg, Mic, Volfogg)
*Dygenguar (Sanger)
*Aussenseiter (Ratsel)
*R-Blade Custom (Ryusei)
*R-Gun Powered (Viletta)

|-
| colspan="2" class="fc-std-sc" |'''第２９話：押された烙印 Scenario 29 - Branded with the Mark'''

|-
| colspan="2" |'''Victory Condition:''' (1)(2) Defeat all enemies '''Defeat Condition:''' (1) Ally battleship is defeated; (2) Ally battleship is defeated, Cagalli is defeated '''Skill Point:''' Destroy all enemies in 6 turns '''Secret Requirements:'''
*Destroid Monster
**Take the Space Route
*FBz-99G
**Take the Space Route
*Strike Rouge IWSP
**Cagalli must have 30 or more kills by the end of this stage.
***Take the Alaska Route
*Duel Gundam
**Take the Alaska Route
'''Unit Acquisition:'''
*GaoFighGar (Guy)
*HyoRyu (HyoRyu)
*EnRyu (EnRyu)
*Goldymarg (Goldymarg)
*Volfogg (Volfogg)/Big Volfogg (Big Volfogg)
*Mic Sounders XIII (Mic Sounders XIII)
*AnRyu (AnRyu)
*KouRyu (KouRyu)
*Ra Cailum (Bright, Torres)

|- class="fc-route-h"
|'''Head to Alaska''' Gundam (0083, Z, ZZ, CCA, Wing, SEED) Daitarn 3 Mazinger (Z, Great) Steel Jeeg Voltes V Daimos Dancouga Evangelion
|'''Go to Space''' GaoGaiGar Ideon Getter Robo Combattler V GaiKing Raideen Goshogun Macross (DYRL, 7, Plus) Virtual On

|-
| class="fc-route2" |'''第３０話：終わらない閃光 Scenario 30 - Unending Flashes of Light'''
| class="fc-route4" |'''第３０話：ロスト・ディーヴァ Scenario 30 - Lost Diva'''

|-
|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated, Kira is defeated '''Skill Point:''' Clear the map in 7 turns '''Secret Requirements:'''
*Strike Rouge IWSP
**Mwu must defeat Dearka
**After the event, Kira must defeat Athrun while both are in SEED.
'''Unit Acquisition:'''
*Skygrasper (Cagalli)
*Strike Gundam (Kira)
*Kira unlocks the SEED pilot skill
*Cagalli unlocks the SEED pilot skill (needs verification)
*Archangel loses Natarle as a subpilot

|'''Victory Condition:''' (1)(2) Defeat all enemies '''Defeat Condition:''' (1) Any ally is defeated: (2) Ally battleship is defeated, Fire Bomber, Diamond Force, or Skull Squadron are defeated '''Skill Point:''' In 6 turns, destroy Glavil and Gavil. You must destroy Glavil before Gavil '''Secret Requirements:'''
*Gavil and FBz-99G Zaubergeran
**Gamlin must defeat Gavil
'''Unit Acquisition:'''
*YF-19 (Isamu) (Before Deploying)
*YF-21 (Guld) (Before Deploying)
*VF-1S S Valkyrie (Focker)
*VF-1S S Valkyrie (Hikaru)
*VF-1A S Valkyrie (Kakizaki)
*VF-17D Nightmare (Gamlin)
*VF-17D Nightmare (Physica)
*VF-19 Kai Fire Valkyrie (Basara)
*VF-11 MAXL Kai (Mylene)
*VF-17 Kai Nightmare (Ray, Veffidas)

|-
| class="fc-route2" |'''第３１話：青き清浄なる世界のために Scenario 31 - For Our Blue & Pure World'''
| class="fc-route4" |'''第３１話：禁断の惑星へ Scenario 31 - To the Forbidden Planet'''

|-
|'''Victory Condition:''' (1) Defeat all enemies; (2)(3) Defeat all Mobile Dolls, All ZAFT Units retreat '''Defeat Condition:''' (1)(2) Ally battleship is defeated, Heero is defeated; (3) Ally battleship is defeated '''Skill Point:''' Do not let a single ZAFT machine get shot down '''Secret Requirements:'''
*Duel Gundam
**Yzak must survive the scenario.
'''Unit Acquisition:'''
*Archangel gains Newman as a subpilot
*Freedom Gundam (Kira)
*Daitarn 3 (Banjo)
*Black Wing (Alan)

|'''Victory Condition:'''
*1st Part: Defeat all enemies
*2nd Part: Defeat Gepelnitch
'''Defeat Condition:'''
*1st Part: Any ally is defeated
*2nd Part: Ally battleship is defeated, Basara or Gamlin are defeated
'''Skill Point:''' In 7 turns, destroy Glavil and Gavil and make Gepelnitch's ship retreat (at 50,000 HP) '''Secret Requirements:'''
*Destroid Monster
**Get the Skill Point on this stage.
*Gavil and FBz-99G Zaubergeran
**Gamlin must defeat Gavil 
'''Unit Acquisition:'''
*Destroid Monster

|-
| class="fc-route2" |'''第３２話：守護神の巫女 Scenario 32 - Priestess of the Guardian God'''
| class="fc-route4" |'''第３２話：インフィニティ・ソウル Scenario 32 - Infinity Soul'''

|-
|'''Victory Condition:''' (1)(2) Defeat all enemies '''Defeat Condition:''' Any Ally is defeated; Ally battleship is defeated, Sanger or Rastel are defeated '''Skill Point:''' In 5 turns, destroy the General of Hell or Flora. '''Secret Requirements:''' '''Unit Acquisition:'''
*Dygenguar (Sanger)
*Assenseiter (Ratsel)

|'''Victory Condition:''' (1) Valgo is defeated; (2)(3) Defeat all enemies '''Defeat Condition:''' (1) Mylene, Ray, or Gamlin are defeated; (2) Basara, Mylene, Ray, or Gamlin are defeated; (3) Ideon is defeated '''Skill Point:''' In 6 turns, destroy Valgo '''Secret Requirements:'''
*Gavil and FBz-99G Zaubergeran
**Gamlin must defeat Gavil 
'''Unit Acquisition:'''
*VF-17D Nightmare → VF-17S Nightmare (Gamlin)
*VF-17D Nightmare (Docker)
**VF-17S (Gamlin), VF-17D (Physica) and VF-17D (Docker) gain the "Diamond Force Attack" combination attack
*VF-19 Kai Fire Valkyrie, VF-11 MAXL Kai, and VF-17 Kai Nightmare gain the "Sound Booster" mech ability
**All VF-19 Kai Fire Valkyrie SB Songs gain (MAP) and (ALL) combination attack variants when Sound Booster activates.
**All VF-11 MAXL Kai SB Songs gain (MAP) and (ALL) combination attack variants when Sound Booster activates.
*Ideon (Cosmo, Kasha, Moera)
** Ideon gains the "Ideon Sword" and "Ideon Sword (MAP)" attacks when IDE gauge is full, and HP is below 30%
*Soloship (Bess, Hatari)

|-
| class="fc-route2" |'''第３３話：暁への脱出 Scenario 33 - Escape to Daybreak'''
| class="fc-route4" |'''第３３話：受け継ぎし遺産 Scenario 33 - The Successor's Inheritance'''

|-
|'''Victory Condition:''' (1)(2) Defeat all enemies besides the Albion '''Defeat Condition:''' (1) Ally battleship is defeated, Kira, Shinobu, or Alan are defeated, Albion is defeated; (2) Kira, Shinobu, Alan, Mwu, or Cagalli are defeated '''Skill Point:''' In 8 turns, destroy all enemies except the Albion '''Secret Requirements:''' '''Unit Acquisition:'''
*Strike Gundam (Mwu)
*Strike Rouge (Cagailli)
*M1 Astray (Juri)
*M1 Astray (Mayura)
*M1 Astray (Asagi)
*Justice Gundam (Athrun)
*Buster Gundam (Dearka)
*Mazinger Z gains the "Giant Swing Rocket Punch" attack
*Great Mazinger gains the "Great Booster" attack
*Koutetsu Jeeg stats are enhanced and can transform into Jeeg Panzeroid
*Dancouga and Black Wing can combine into Final Dancouga.

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated, Akira or Jinguji are defeated '''Skill Point:''' In 8 turns, destroy Etzira, Valgo, Glavil, Gabro Zan, and Gije '''Secret Requirements:''' '''Unit Acquisition:'''
*VF-1A S Valkyrie (Kakizaki)
*Raideen gains the Mutron Open mech ability
*Ideon (Cosmo, Kasha, Moera)
*Soloship (Bess, Hatari)
*Battle 7 (Max, Exedore, Miho, Sally)
*VF-1S S Valkyrie (Fokker)
*VF-1S S Valkyrie (Hikaru)
*VF-1A S Valkyrie (Kakizaki)
*YF-19 (Isamu)
*YF-21 (Guld)
*VF-19 Kai Fire Valkyrie (Basara)
*VF-11 MAXL Kai (Mylene)
*VF-17 Kai Nightmare (Ray, Veffidas)
*VF-17S Nightmare (Gamlin)
*VF-17D Nightmare (Physica)
*VF-17D Nightmare (Docker)

|}
 

==Stages 34 - 44==
{| width="100%"
|- class="fc-route-h"
| width="25%" |'''Touma Route'''
| width="25%" |'''Kusuha Route'''
| width="25%" |'''Cobray Route'''
| width="25%" |'''Selena Route'''

|-
| class="fc-route1" |'''第３４話：武人の心、その意味 Scenario 34 - Why a Warrior Fights'''
| class="fc-route2" |'''第３４話：怒りの強念者 Scenario 34 - The Wrath of a Esper'''
| class="fc-route3" |'''第３４話：虚ろな魂の捕囚 Scenario 34 - Captivity of the Hollow Soul'''
| class="fc-route4" |'''第３４話：ベトレイヤー Scenario 34 - Betrayer'''

|-
|'''Victory Condition:'''
*1st Part: (1)(2) Defeat all enemies
*2nd Part: Bemidoban is defeated 
'''Defeat Condition:'''
*1st Part: (1) Ally battleship is defeated; (2) Ally battleship is defeated, Touma is defeated
*2nd Part: Touma is defeated
'''Skill Point:''' Defeat all enemies within 6 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Raioh (Touma)
*Mazinger Z, Great Mazinger and Getter Dragon gain the "F Dynamic Special" combination attack

|'''Victory Condition:'''(1)(2) Shin RyuOhKi is defeated; (3)(4) Bemidoban and Shmuel are defeated '''Defeat Condition:''' (1) Any ally is defeated; (2) Kusuha is defeated; (3) Kusuha is defeated, Ally battleship is defeated; (4) Ally battleship is defeated '''Skill Point:''' Destroy the Bemidoban (retreats (8000 (E) / 10000 (N) / 12000 (H)) HP) '''Secret Requirements:''' '''Unit Acquisition:'''
*Mazinger Z, Great Mazinger and Getter Dragon gain the "F Dynamic Special" combination attack
*Dygenguar (Sanger)
*Aussenseiter (Ratsel)

|'''Victory Condition:''' Shin RyuOhKi is defeated '''Defeat Condition:''' Ally battleship is defeated, Cobray, Arad, or Seolla are defeated '''Skill Point:''' Defeat Shin RyuOuKi within 6 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Werkbau (Cobray)
*Mazinger Z, Great Mazinger and Getter Dragon gain the "F Dynamic Special" combination attack

|'''Victory Condition:''' (1) Shmuel is defeated; (2)(3) Bemidoban defeated Shin RyuOhKi '''Defeat Condition:''' (1) Selena is defeated; (2) Ally battleship is defeated, Selena is defeated; (3) Ally battleship is defeated '''Skill Point:''' Bemidoban and Shin RyuOuKi shot down. Both flee when below (8000 (E) / 10000 (N) / 12000 (H)) HP. '''Secret Requirements:''' '''Unit Acquisition:'''
*Mazinger Z, Great Mazinger and Getter Dragon gain the "F Dynamic Special" combination attack
*Alterion (CF) (Ibis, Tsugumi)
*AS Soleares (Selena, Elma) is unavailable during the intermission

|-
| class="fc-route1" |'''第３５話：闘志、誰がために Scenario 35 - For Whom the Fighting Spirit Burns'''
| class="fc-route2" |'''第３５話：魂、久遠に Scenario 35 - The Soul, Into Eternity'''
| class="fc-route3" |'''第３５話：THE GUN OF DIS Scenario 35 - THE GUN OF DIS'''
| class="fc-route4" |'''第３５話：クロージング・ハート Scenario 35 - Closing Heart'''

|-
|'''Victory Condition:''' (1)(2) Defeat all enemies '''Defeat Condition:''' (1) Touma is defeated; (2) Ally battleship is defeated, Touma, Sanger, or Rastel are defeated '''Skill Point:''' Defeat all enemies within 4 turns of allied reinforcements arriving. '''Secret Requirements:''' '''Unit Acquisition:'''
*DaiRaioh(Touma)
*Dygenguar (Sanger)
*Aussenseiter (Ratsel)

|'''Victory Condition:''' (1)(2)(3) Shin RyuOhKi is defeated '''Defeat Condition:''' (1) Kusuha or Bullet are defeated; (2) Kusuha is defeated; (3) Ally battleship is defeated, Kusuha is defeated '''Skill Point:''' Destroy Shin RyuOhKi within 6 turns of Varuch Ben and Ishar's arrival, destroying them first. '''Secret Requirements:''' '''Unit Acquisition:'''
*GouRyu Kai (Kusuha)
*Raiko Kai (Bullet)
*Shin RyuKoOh (Kusuha, Bullet)
*Dygenguar (Sanger)
*Aussenseiter (Ratsel)

|'''Victory Condition:''' (1)(2) Bemidoban or Shmuel are defeated; (3) ??? is defeated; (4) Valk Baal is defeated '''Defeat Condition:''' (1) Cobray is defeated, (2)(3)(4) Ally battleship is defeated, Cobray is defeated '''Skill Point:''' Defeat the Bemidoban within 5 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Varuch Ben (Cobray)
*Dis Astranagant (Cobray)

|'''Victory Condition:''' (1)(2) Defeat all enemies '''Defeat Condition:''' (1) Selena is defeated; (2) Ally battleship is defeated '''Skill Point:''' Map cleared within 7 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Eslim (Selena)
*Alterion (CF) replaces Tsugumi with Slay as a Subpilot

|-
| colspan="4" class="fc-std-sc" |'''第３６話：激突！勇者VS勇者！ Scenario 36 - Clash! Brave vs. Brave!'''

|-
| colspan="4" |'''Victory Condition:'''
*1st Part: Defeat all enemies
*2nd Part: Ally battleship is defeated
'''Defeat Condition:'''
*1st Part: Star GaoGaiGar is defeated
*2nd Part: Gai is defeated
'''Skill Point:''' Defeat all enemies within 6 turns. '''Secret Requirements:'''
*EVA-01 F-Type Equipment
**Shinji must defeat Ramiel on the first part of this scenario.
*Early Nu Gundam HWS
**Amuro must have 60 or more kills by the end of the scenario.
*GP-02A
**Burning, Monsha, Bate, and Adel must have a combined killcount of 100 or more by the end of the scenario.
*Nuclear Bazooka
**Meet the requirements for GP-02A
*Black Getter
**Michiru must have 20 kills or more by the end of the scenario.
'''Unit Acquisition:'''
*Gundam GP02
*Megarider
*Re-GZ BWS
*MP Nu Gundam
*Black Getter
*VF-1S S Valkyrie (Fokker)
*VF-1S S Valkyrie (Hikaru)
*VF-1A S Valkyrie (Kakizaki)
*VF-1J S Valkyrie
*YF-19 (Isamu)
*YF-21 (Guld)
*Battle 7 (Max)
*VF-19 Kai Fire Valkyrie (Basara)
*VF-11 MAXL Kai (Mylene)
*VF-17 Kai Nightmare (Ray)
*VF-17S Nightmare (Gamlin)
*VF-17D Nightmare (Physica)
*VF-17D Nightmare (Docker
*Soloship (Bess, Hatari)
*Ideon (Cosmo, Kasha, Moera)

|-
| colspan="4" class="fc-std-sc" |'''第３７話：果て無き旅路の始まり Scenario 37 - The Beginning of an Unending Journey'''

|-
| colspan="4" |'''Victory Condition:''' (1) Defeat all enemies; (2)(3) Devariim is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated; (3) Ally battleship is defeated, Bundle, Cutnall, or Kernagul are defeated
'''Skill Point:''' All enemies destroyed within 6 turns, with Devariim being last. '''Secret Requirements:''' '''Unit Acquisition:'''
*Heavy Weapons System parts for Nu Gundam
*Evangelion Unit 0 Custom gains the "N2 Mine" MAP attack
*Evangelion Unit 1 gains the "Magoroku E Sword" attack
*Gunbuster (Noriko)
*Sizzler Black (Jung)
*Eltrium (Tashiro, Deputy Chief)
*Bundle Ship (Bundle)
*Cutnall Ship (Cutnall)
*Kernagul Ship (Kernagul)

|- class="fc-route-h"
| colspan="2" |'''Go with the Soloship''' Gundam (0083, Zeta, ZZ, CCA, Wing, SEED) Getter Robo Raideen Daitarn 3 Evangelion Ideon GaoGaiGar
| colspan="2" |'''Go with the Battle 7''' Mazinger (Z, Great) Macross (DYRL, 7, Plus) Steel Jeeg Combattler V Voltes V Gunbuster Daimos Gaiking Goshogun Dancouga Virtual On

|-
| colspan="2" class="fc-route1" |'''第３８話：運命の炎の中で Scenario 38 - Within the Fires of Destiny'''
| colspan="2" class="fc-route3" |'''第３８話：戦火は星の瞬きと Scenario 38 - The Fires of War Among the Twinkling Stars'''

|-
| colspan="2" |'''Victory Condition:'''
*1st Part: Enemy Battleship is defeated
*2nd Part: (1) Defeat all enemies; (2) Dalam's Ship is defeated
'''Defeat Condition:'''
*1st Part: Ally battleship is defeated, Ideon is defeated
*2nd Part: (1) Ally battleship is defeated; (2) Ally battleship is defeated, Cosmo is defeated
'''Skill Point:''' Clear the map within 7 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Ideon loses Moera as a subpilot
*Ideon gains the "Ideon Gun" attack

| colspan="2" |'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Defeat all enemies within 6 turns. '''Secret Requirements:''' '''Unit Acquisition:'''

|-
| colspan="2" class="fc-route1" |'''第３９話：果てに待つもの Scenario 39 - What Awaits at the End'''
| colspan="2" class="fc-route3" |'''第３９話：ただ母星のために Scenario 39 - All for the Motherworld'''

|-
| colspan="2" |'''Victory Condition:''' (1)(2)Gabro Zan is defeated '''Defeat Condition:''' (1) Ally battleship is defeated, Ryouma, Hayato, Benkei, or Michiru are defeated; (2) Ally battleship is defeated, Ryouma, Hayato, Benkei, or Cosmo are defeated '''Skill Point:''' Destroy all Buff Clan ships within 8 turns, saving Gabro Zan for last. '''Secret Requirements:''' '''Unit Acquisition:'''
* Ideon gains Gije as a subpilot
* Shin Getter-1 gains the "Shin Shine Spark" attack

| colspan="2" |'''Victory Condition:''' Heinel is defeated '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Within 7 turns, defeat all enemies, then defeat Heinel and Richter (Richter must be defeated before Heinel) '''Secret Requirements:''' '''Unit Acquisition:'''

*Goshogun gains the "GoFlasher Special" attack

|-
| colspan="2" class="fc-route1" |'''第４０話：勇者王、最後の刻！ Scenario 40 - The King of Brave’s Final Hour!'''
| colspan="2" class="fc-route3" |'''第４０話：勇気、果つる時… Scenario 40 - When Courage Fails...'''

|-
| colspan="2" |'''Victory Condition:'''
*1st Part: Defeat all enemies
*2nd Part: Ally battleship is defeated
'''Defeat Condition:'''
*1st Part: Defeat all enemies
*2nd Part: Gai is defeated
'''Skill Point:''' Defeat all enemies within 6 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*All GaoGaiGar units are lost

| colspan="2" |'''Victory Condition:''' (1)(2)(3) Defeat all enemies '''Defeat Condition:''' (1) Gai is defeated; (2) Ally battleship is defeated, Gai is defeated; (3) Ally battleship is defeated '''Skill Point:''' Defeat all enemies within 7 turns, with Palparepa Plus being the last one. '''Secret Requirements:''' '''Unit Acquisition:'''
*GaoFighGar (Gai)
*All GaoGaiGar units are lost

|-
| colspan="4" class="fc-std-sc" |'''第４１話：銀河が消滅する日 Scenario 41 - The Day the Galaxy is Extinguished'''

|-
| colspan="4" |'''Victory Condition:''' (1) Defeat all enemies; (2) GaoFighGar is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated, J is defeated '''Skill Point:''' GaoFighGar shot down by turn 7. '''Secret Requirements:'''
*Gije & Ganga Rube
**When given the option, choose to meet the opponent's challenge (first option).
'''Unit Acquisition:'''
*J-Ark (J, Tomoro)
|-
| colspan="4" class="fc-std-sc" |'''第４２話：超勇者黙示録 Scenario 42 - The Super Brave Apocalypse'''

|-
| colspan="4" |'''Victory Condition:'''
*1st Part: Defeat all enemies
*2nd Part: Genesis GaoGaiGar reaches the designated point in 4 turns
'''Defeat Condition:'''
*1st Part: Gai or J are defeated
*2nd Part: Ally battleship is defeated, Gai is defeated, 5th turn is reached
'''Skill Point:''' All enemies shot down by turn 7. '''Secret Requirements:'''
* J-Phoenix & Renais (Sub Pilot)
**Have J defeat Pia Decem on the first part of the stage. Defeat Pia Decem again to gain the attack.
'''Unit Acquisition:'''
* King J-der gains the "J-Phoenix" attack, and gains Renais as a sub-pilot
**Koryuu and Anryuu lose the "Renais Support Attack" attacks
*Genesic GaoGaiGar (Gai)
*J-Ark (J, Tomoro)
** Renais also is a sub-pilot if the conditions are met in the first part of the stage
*Goldymarg (Goldymarg)
*Big Volfogg (Volfogg)
*TenRyuJin (TenRyuJin)
*KoRyu (KoRyu)
*AnRyu (AnRyu)
*EnRyu (EnRyu)
*HyoRyu (HyoRyu)
*Mic Sounder XIII (Mic Sounder XIII)

|- class="fc-route-h"
|'''Touma Route'''
|'''Kusuha Route'''
|'''Cobray Route'''
|'''Selena Route'''

|-
| class="fc-route1" |'''第４３話：閉ざされた世界で Scenario 43 - In a Closed-Off World'''
| class="fc-route2" |'''第４３話：真の龍神 Scenario 43 - The True Dragon God'''
| class="fc-route3" |'''第４３話：人形たちの宴 Scenario 43 - The Doll’s Banquet'''
| class="fc-route4" |'''第４３話：サイレント・クライ Scenario 43 - Silent Cry'''

|-
|'''Victory Condition:'''
*1st Part: (1) Defeat all enemies; (2) Vaikran is defeated, Houle is defeated
*2nd Part: Baran is defeated
'''Defeat Condition:'''
*1st Part: (1) Ally battleship is defeated, Touma or Ryusei are defeated; (2) Ally battleship is defeated, Ryusei is defeated
*2nd Part: Touma is defeated
'''Skill Point:''' Defeat the Bemidoban within 5 turns. '''Secret Requirements:''' '''Unit Acquisition:'''

|'''Victory Condition:''' (1) Defeat Shin RyuOhKi; (2) Vaikran is defeated, Houle is defeated '''Defeat Condition:''' (1) Kusuha or Ryusei are defeated; (2) Ally battleship is defeated, Ryusei is defeated '''Skill Point:''' Defeat Shin RyuOhKi within 5 turns. '''Secret Requirements:''' '''Unit Acquisition:'''

|'''Victory Condition:'''
*1st Part: (1) Defeat all enemies; (2) Vaikran is defeated, Houle is defeated
*2nd Part: Valk Baal is defeated
'''Defeat Condition:'''
*1st Part: (1)(2) Ally battleship is defeated, Ryusei is defeated
*2nd Part: Cobray is defeated
'''Skill Point:''' Defeat the Bemidoban within 5 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Dis Astranagant (Cobray) is unavailable during the intermission

|'''Victory Condition:''' (1) Defeat all enemies; (2)(3) Vaikran is defeated, Houle is defeated'''Defeat Condition:''' (1)(2) Ally battleship is defeated, Selena, Ibis, or Ryusei are defeated (3) Ryusei is defeated'''Skill Point:''' Defeat the Bemidoban within 5 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*AS Alegrias (Selena, Elma?) Is unavailable until the next stage

|-
| class="fc-route1" |'''第４４話：闘志、未来のために Scenario 44 - Fighting Spirit, for the Future'''
| class="fc-route2" |'''第４４話：四神招魂、ここに Scenario 44 - The Four Gods Souls, Gather Here'''
| class="fc-route3" |'''第４４話：鋼の戦神 Scenario 44 - The Steel War God'''
| class="fc-route4" |'''第４４話：マイホーム・マイフレンズ Scenario 44 - My Home, My Friends'''

|-
|'''Victory Condition:'''
*1st Part: Vaikran is defeated
*2nd Part: (1)(2) Vaikran is defeated
'''Defeat Condition:'''
*1st Part: Ally battleship is defeated, Ryusei is defeated
*2nd Part: (1) Touma or Lyria are defeated; (2) Touma, Baran, or Lyria are defeated
'''Skill Point:''' Destroy the Vaikran within 5 turns. '''Secret Requirements:'''
*VF-19F Excaliburs
**Max must have a total of 60 or more kills by the end of the scenario, if you do not pick the Go to Varauta route.
*Gije & Ganga Rube
**You must pick the Go To Bozoan Route.
'''Unit Acquisition:'''
* DaiRaioh gains the "Jinrai" attack 
*Banpreios (Ryuusei, Rai, Mai)
*Dygenguar (Sanger)
*Aussenseiter (Ratsel)
*Shumel (Lyria)
*Bemidoban (Baran)

|'''Victory Condition:'''
*1st Part: Vaikran is defeated
*2nd Part: (1)(2) Vaikran is defeated
'''Defeat Condition:'''
*1st Part: Kusuha or Ryusei are defeated
*2nd Part: (1) Ally battleship is defeated, Kusuha is defeated; (2) Kusuha, Bullet, or Lyria are defeated
'''Skill Point:''' Destroy the Vaikran within 5 turns. '''Secret Requirements:'''
*VF-19F Excaliburs
**Max must have a total of 60 or more kills by the end of the scenario, if you do not pick the Go to Varauta route.
*Gije & Ganga Rube
**You must pick the Go To Bozoan Route.
'''Unit Acquisition:'''
*Banpreios (Ryuusei, Rai, Mai)
*Dygenguar (Sanger)
*Aussenseiter (Ratsel)
*Shumel (Lyria)
*Shin RyuKoOh can now transform into Shin KoRyuOh

|'''Victory Condition:'''
*1st Part: (1) Defeat all enemies; (2) Vaikran is defeated
*2nd Part: Defeat all enemies
'''Defeat Condition:'''
*1st Part: (1)(2) Ally battleship is defeated, Ryusei, Arad or Seola are defeated
*2nd Part: Ally battleship is defeated, Cobray or Lyria are defeated
'''Skill Point:''' Destroy the Vaikran within 3 turns of its arrival. '''Secret Requirements:'''
*VF-19F Excaliburs
**Max must have a total of 60 or more kills by the end of the scenario, if you do not pick the Go to Varauta route.
*Gije & Ganga Rube
**You must pick the Go To Bozoan Route.
'''Unit Acquisition:'''
*Dis Astranagant (Cobray)
*Banpreios (Ryuusei, Rai, Mai)
*Dygenguar (Sanger)
*Aussenseiter (Ratsel)
*Shumel (Lyria)

|'''Victory Condition:'''
*1st Part: (1) Valk Isher is defeated; (2) Vaikran is defeated
*2nd Part: (1)(2) Vaikran is defeated
'''Defeat Condition:'''
*1st Part: (1)(2) Ally battleship is defeated, Ryusei or Ibis are defeated
*2nd Part: (1) Ally battleship is defeated, Selena, Ibis, or Lyria are defeated; (2) Selena or Lyria are defeated
'''Skill Point:''' Destroy the Vaikran within 3 turns of its arrival. '''Secret Requirements:'''
*VF-19F Excaliburs
**Max must have a total of 60 or more kills by the end of the scenario, if you do not pick the Go to Varauta route.
*Gije & Ganga Rube
**You must pick the Go To Bozoan Route.
'''Unit Acquisition:'''
*Banpreios (Ryuusei, Rai, Mai)
*Dygenguar (Sanger)
*Aussenseiter (Ratsel)
*Shumel (Lyria)
*Alterion (CF) replaces Slay with Tsugumi as a subpilot
*Vegalion (Slay)
**Alterion (CF) and Vegalion can combine into Hyperion

|}
 

==Stages 45 - 48==
{| width="100%"
|- class="fc-route-h"
| colspan="2" |'''Go to Earth'''
| colspan="2" |'''Go to Space'''

|- class="fc-route-h"
| width="25%" |'''Search for Irui''' Mazinger (Z, Great) Getter Robo Kotetsu Jeeg Gaiking Dancouga
| width="25%" |'''Fight against ZAFT''' Gundam (0083, Z, ZZ, CCA) Gundam Wing Gundam SEED Evangelion
| width="25%" |'''Go to Varauta''' Macross (DYRL, 7, Plus) GoShogun Daitarn 3 Gunbuster
| width="25%" |'''Go to Boazan''' Ideon Combattler V Voltes V Daimos Raideen GaoGaiGar Virtual On

|-
| class="fc-route1" |'''第４５話：とらわれの心、叫ぶ時 Scenario 45 - When the Captive Heart Cries Out'''
| class="fc-route2" |'''第４５話：忍び寄る終焉 Scenario 45 - Creeping Death'''
| class="fc-route3" |'''第４５話：悪夢の突入作戦 Scenario 45 - Charging into a Nightmare'''
| class="fc-route4" |'''第４５話：もう一つの母星ボアザン Scenario 45 - Another Mother Planet - Boazan'''

|-
|'''Victory Condition:''' (1) Defeat all enemies: (2) Legion is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated '''Skill Point:''' Defeat all enemies within 7 turns '''Secret Requirements:'''
'''Unit Acquisition:'''
*Voltes V is unavailable during the intermission
*Daimos is unavailable during the intermission

|'''Victory Condition:''' (1) Defeat all enemies; (2) All Angels are defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated, Shinji, Asuka, or Rei are defeated '''Skill Point:''' Defeat all enemies within 5 turns. '''Secret Requirements:'''
*Early Nu Gundam HWS
**If you did not receive it on Scenario 37, Amuro must have 60 or more kills by the end of the scenario.
*EVA-01 F-Type Equipment(optional)
**Shinji must defeat Armisael.
*Neue Ziel
**Kou must have 40 or more kills than Keith by the end of the scenario.
*Val Varo
**Keith must have 20 or more kills than Kou by the end of the scenario.
*Gerbera Tetra
**Kou and Keith's killcounts must be within 6 of one another by the end of the scenario.
*Quin Mantha
**The sum of Ple and Ple 2's killcounts must be a number ending in 5 at the end of the scenario.
*Haman's Qubeley
**The sum of Ple and Ple 2's killcounts must be a number ending in 0 at the end of the scenario.
*MP Qubeleys
**The sum of Ple and Ple 2's killcounts must be a number ending in 7 at the end of the scenario.
*Doven Wolf
**The sum of Beecha and Mondo's killcounts must be a number ending in 0 at the end of the scenario.
*Geymalk
**The sum of Beecha and Mondo's killcounts must be a number ending in 5 at the end of the scenario.
*Strike Rouge IWSP
**The sum of Cagalli, Julie, Mayura, and Asagi's killcounts must be 100 or more by the end of the scenario.
*Early Full Armor ZZ Gundam
**Judau, Mondo, Beecha, Elle, Roux, and Iino's combined killcounts must be greater than 115 by the end of this scenario.
'''Unit Acquisition:'''
*Neue Ziel OR Val Varo OR Gerbera Tetra
*Quin Mantha OR Haman's Qubeley OR Mass Production Qubeley (x2)
*Doven Wolf OR Geymalk
*Strike Rougue IWSP
*Heavy Weapon System for Nu Gundam
*Full Armor Parts for ZZ Gundam
*Evangelion Unit 2 gains the "A.T. Field" attack
*Evangelion Unit 0 Custom gains the "Lance of Longinus" attack

|'''Victory Condition:'''
*1st Part: All allies reach the designated point, aside Battle 7
*2nd Part: Any ally reaches the designated point
'''Defeat Condition:'''
*1st Part: Any ally is defeated
*2nd Part: Any ally is defeated
'''Skill Point:''' Defeat all enemies before moving a unit to the target area. '''Secret Requirements:'''
'''Unit Acquisition:'''
*The following all gain the "Large Anti-Ship Reaction Missile" attack
**VF-1S S Valkyrie (Focker), VF-1S S Valkyrie (Hikaru), VF-1A S Valkyrie (Kakizaki)
**VF-17S Nightmare (Gamlin), VF-17D Nightmare (Docker), VF-17D Nightmare (Physica)
**YF-19 (Isamu), YF-21 (Guld)

|'''Victory Condition:''' Zartan is defeated '''Defeat Condition:''' Any ally is defeated '''Skill Point:''' Destroy all other enemies before destroying Zaltan. '''Secret Requirements:'''
'''Unit Acquisition:'''

|-
| class="fc-route1" |'''第４６話：さらば父よ、戦士達の旅立ち Scenario 46 - Farewell, Father! The Warriors Depart'''
| class="fc-route2" |'''第４６話：永遠を信じて Scenario 46 - Believe in Eternity'''
| class="fc-route3" |'''第４６話：野望の第４惑星 Scenario 46 - The Fourth Planet of Ambition'''
| class="fc-route4" |'''第４６話：崩れゆく邪悪の塔 Scenario 46 - The Collapsing Tower of Evil'''

|-
|'''Victory Condition:''' (1) Steel Jeeg persuades Flora; (2) Defeat Yamata no Orochi, Demonica, and the Dragon Ship; (3) '''Defeat Condition:''' (1) Flora is defeated, Ally battleship is defeated, Kouji, Tetsuya, or Steel Jeeg are defeated; (2) Yamata no Orochi reaches the designated point, Ally battleship is defeated, Kouji, Tetsuya or Steel Jeeg are defeated '''Skill Point:''' Destroy Ryuuma and the Grand Marshall of Hell within 8 turns. '''Secret Requirements:'''
*Minmei's Disc
**Move Boss's squad onto either 'Hut' tile on the beach, and you will pick up the item
'''Unit Acquisition:'''
*Mazinkaizer gains the "Kaizer Nova" attack and Flight (S Rank in Air)

|'''Victory Condition:''' (1)(2) Defeat all enemies; (3) The Dominion withdraws '''Defeat Condition:''' (1) Any ally is defeated; (2)(3) Ally battleship is defeated, Kira or Athrun are defeated '''Skill Point:''' Destroy the Dominion (retreats at (10000HP (E) / 15000HP (N)/20000HP (H)) '''Secret Requirements:''' '''Unit Acquisition:'''
*Eternal (Lacus, Andrew)
*BuCUE
*METEOR parts for Freedom Gundam
*METEOR parts for Justice Gundam
*LaGOWE

|'''Victory Condition:''' (1) Guide all enemies east past the designated line; (2) All allies reach the escape point '''Defeat Condition:''' (1) Any ally is defeated, Any enemy is defeated; (2) Any ally is defeated '''Skill Point:''' Clear the map by defeating all enemies within 8 turns of the victory condition change '''Secret Requirements:'''
*VF-19F Excaliburs
**Max must get 15 or more kills on this scenario.
'''Unit Acquisition:'''
*VF-22S Sturmvogel II (Max)
*FBz-99G Zaubergeran (Gamlin)
*VF-19 Kai Fire Valkyrie gains the song "TRY AGAIN"
**VF-19 Kai Fire Valkyrie, VF-11 MAXL Kai, and VF-17 Kai Nightmare gain the "TRY AGAIN" (MAP) and (ALL) combination attack

|'''Victory Condition:''' (1) None; (2) Warchimedes is defeated; (3) Janera is defeated '''Defeat Condition:''' (1) Any friendly unit is defeated, Voltes V or Daimos are defeated; (2)(3) Ally battleship is defeated, Hyouma, Ken'ichi, Kazuya, or Heinel are defeated '''Skill Point:''' Destroy all enemies and finish the stage within 10 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Combattler V, Voltes V, and Daimos gain the "Choudenji SeiKenZuki" combination attack

|-
| class="fc-route1" |'''第４７話：神になろうとした男 Scenario 47 - The Man Who Tried to Become a God'''
| class="fc-route2" |'''第４７話：ヒトの見た夢 Scenario 47 - The Dream People Saw'''
| class="fc-route3" |'''第４７話：大宇宙の意志 Scenario 47 - The Will of the Universe'''
| class="fc-route4" |'''第４７話：因果の海で Scenario 47 - In the Sea of Causality'''

|-
|'''Victory Condition:''' (1) Defeat all enemies; (2) Shapiro is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated '''Skill Point:''' Destroy Shapiro within 6 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Gaiking and Daiku Maryuu gain the "Giant Cutter Upside-down Slash" combination attack

|'''Victory Condition:''' (1)(2)(3) Defeat all enemies; '''Defeat Condition:''' (1) Ally battleship is defeated, Kira, Mwu, or Dearka are defeated; (2) Kira is defeated; (3) The Vesalius is defeated '''Skill Point:''' Orga, Clotho and Shani shot down before Fllay reaches the Dominion. '''Secret Requirements:''' '''Unit Acquisition:'''

|'''Victory Condition:''' (1)(2)(3) Defeat all enemies '''Defeat Condition:''' (1) Any ally is defeated; (2) Ally battleship is defeated, Bundle is defeated; (3) Ally battleship is defeated, Bundle, Gamlin, or Mylene are defeated '''Skill Point:''' Destroy all SMTC units within 5 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*VF-19S Excalibur (before deployment)
*VF-19F Excalibur (x2) (before deployment)
*Bundle's Ship (Bundle, Cutnal, Kernagul)

|'''Victory Condition:'''
*1st and 2nd Part: Defeat all enemies within (5 (E) / 4 (N) / 3 (H)) turns
*3rd and 4th Part: Defeat all enemies within (4 (E) / 3 (N) / 2 (H)) turns
*5th Part: Defeat all enemies within (8 (E) / 7 (N) / 6 (H)) turns
'''Defeat Condition:'''
*1st and 2nd Part: Ally battleship is defeated, Turn (6 (E) / 5 (N) / 4 (H)) is reached
*3rd and 4th Part: Ally battleship is defeated, Turn (5 (E) / 4 (N) / 3 (H)) is reached
*5th Part: Ally battleship is defeated, Turn (9 (E) / 8 (N) / 7 (H)) is reached
'''Skill Point:''' During the 5th Part: Shoot down the two Gataman Zans before the Gabro Zan '''Secret Requirements:''' '''Unit Acquisition:'''

|-
| colspan="2" class="fc-route1" |'''第４８話：失われた者たちへの鎮魂歌 Scenario 48 - Requiem for the Lost'''
| colspan="2" class="fc-route4" |'''第４８話：銀河に死す Scenario 48 - To Die in the Galaxy'''

|-
| colspan="2" |'''Victory Condition:''' (1) Deathgaia, Gildrome, and Helmut are defeated; (2) Mute Zalbados is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated '''Skill Point:''' Defeat all enemies within 6 turns after Muge Zalbados appears, then defeat Muge Zalbados '''Secret Requirements:'''
*Early Nu Gundam HWS
**If you did not receive it on Scenario 37 or 45, Amuro must have 60 or more kills by the end of the scenario.
'''Unit Acquisition:'''

| colspan="2" |'''Victory Condition:''' (1) Defeat all enemies; (2) Gollum or Zomd are defeated; (3) Defeat all enemies; (4) Gabro Zan is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated, Basara is defeated; (3)(4) Ally battleship is defeated, Ideon is defeated '''Skill Point:''' Destroy GaviGla (retreats at 8000HP (E) / 10000HP (N) / 12000HP (H)) '''Secret Requirements:'''
*Early Nu Gundam HWS
**If you did not receive it on Scenario 37 or 45, Amuro must have 60 or more kills by the end of the scenario.
*Gije & Ganga Rube
**The Ide Gauge must reach level 5 during this scenario.
'''Unit Acquisition:'''
*Ideon replaces Gije with Dek as a Subpilot
*Battle 7 gains the "Large Anti-Ship Reaction Missile" attack
*VF-19 Kai Fire Valkyrie (Basara) is unavailable during the intermission

|}
 

==Stages 49 - 58==
{| width="100%"
|-
| colspan="3" class="fc-std-sc" |'''第４９話：銀河に響く歌声 Scenario 49 - Songs Resounding Through the Galaxy'''

|-
| colspan="3" |'''Victory Condition:'''
*1st Part: Defeat all enemies, In 5 turns Battle 7 reaches the designated point
*2nd Part: (1) In 6 turns, Battle 7 reaches the designated point; (2)(3)(4) Gepelnitch is defeated
'''Defeat Condition:'''
*1st Part: Ally battleship is defeated, Battle 7 doesn't reach the designated point by turn 6
*2nd Part: (1) Ally battleship is defeated, Mylene or Ray are defeated, Battle 7 doesn't reach the designated point by turn 7; (2) Ally battleship is defeated, Ray is defeated; (3) Ally battleship is defeated, Basara, Mylene, or Ray are defeated; (4) Ally battleship is defeated, Basara, Mylene, Ray, or Sybil are defeated
'''Skill Point:''' GaviGla is defeated (in the 1st part) '''Secret Requirements:'''
*Gavil and FBz-99G Zaubergeran
**If Gamlin has over 50 kills, Gamlin must defeat GaviGla during the first half of the scenario. During the second half of the scenario, do not defeat Gavil.
'''Unit Acquisition:'''
*VF-22S Sturmvogel II (Max)
*VF-22S Sturmvogel II (Milia)
*Sybil (Sybil)
**VF-19 Kai Fire Valkyrie, VF-11 MAXL Kai, and VF-17 Kai Nightmare, and Sybil gain the "TRY AGAIN" combination attack
*FBz-99G Zaubergeran (Gavil)

|-
| colspan="3" class="fc-std-sc" |'''第５０話：二つの門と二つの星 Scenario 50 - Two Gates, Two Stars'''

|-
| colspan="3" |'''Victory Condition:''' (1) Hermodr Echad is defeated; (2) Zfield is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated '''Skill Point:''' Destroy the Hermodr Echad within 5 turns. '''Secret Requirements:'''
*Duel Gundam & Yzak
**Dearka's killcount must be 50 or more by the end of the scenario.
'''Unit Acquisition:'''

|-
| colspan="3" class="fc-std-sc" |'''第５１話：終わらない明日へ Scenario 51 - To an Unending Tomorrow'''

|-
| colspan="3" |'''Victory Condition:'''
*1st Part: (1) Destroy all nuclear missiles; (2) Dominion is defeated & Athrun reaches the designated point
*2nd Part: Destroy the Genesis reactor within 4 turns
'''Defeat Condition:'''
*1st Part: (1) Any missile reaches the end of the map, Ally battleship is defeated, Kira, Athrun or Cagalli are defeated; (2) Ally battleship is defeated, Kira, Athrun or Cagalli are defeated
*2nd Part: Kira is defeated, reach the 5th turn
'''Skill Point:''' Destroy the Providence Gundam (in the 2nd part) '''Secret Requirements:'''
*Duel Gundam & Yzak
**During the first half of the scenario, destroy all of the nukes, then have Dearka battle with Yzak
**Both must survive the first half of the scenario
'''Unit Acquisition:'''
*Lacus unlocks the SEED pilot skill
*Duel Gundam (Yzak)

|-
| colspan="3" class="fc-std-sc" |'''第５２話：世界の中心でアイを叫んだもの Scenario 52 - The One Who Cried "Love" at the Heart of the World'''

|-
| colspan="3" |'''Victory Condition:'''
*1st Part: (1)(2)(3) Defeat all enemies (4)(5) EVA Unit 1 is defeated
*2nd Part: EVA Unit 1 is defeated
'''Defeat Condition:'''
*1st Part: (1) Any ally is defeated; (2) Shinji is defeated; (3)(4) Ally battleship is defeated; (5) Ally battleship is defeated, Reach the 6th turn after the "Cross" grows from the Earth
*2nd Part: Shinji is defeated
'''Skill Point:''' Asuka survives for 2 full turns. '''Secret Requirements:'''
*Neue Ziel
**Kou must have 40 or more kills than Keith by the end of the scenario.
*Val Varo
**Keith must have 20 or more kills than Kou by the end of the scenario.
*Gerbera Tetra
**Kou and Keith's killcounts must be within 6 of one another by the end of the scenario.
*Quin Mantha
**The sum of Ple and Ple 2's killcounts must be a number ending in 5 at the end of the scenario.
*Haman's Qubeley
**The sum of Ple and Ple 2's killcounts must be a number ending in 0 at the end of the scenario.
*MP Qubeleys
**The sum of Ple and Ple 2's killcounts must be a number ending in 7 at the end of the scenario.
*Doven Wolf
**The sum of Beecha and Mondo's killcounts must be a number ending in 0 at the end of the scenario.
*Geymalk
**The sum of Beecha and Mondo's killcounts must be a number ending in 5 at the end of the scenario.
*EVA-01 F-Type Equipment
**Shinji must defeat Zeruel on the first part of this scenario.
**Shinji must defeat EVA-01 on the second part of this scenario.
**The sum of Shinji, Asuka, and Rei's killcounts must be 250 or more, or 150 or more if you met the requirement on scenario 45.
*Hi-Nu Gundam
**Amuro and Bright's combined killcounts must be greater than 120 by the end of this scenario.
*Sazabi
**Amuro and Kamille's killcount must be 50 or more each at the end of this scenario. You will receive it at the start of next scenario.
*Strike Rouge IWSP
**If you did not receive it on Scenario 45, the sum of Cagalli, Julie, Mayura, and Asagi's killcounts must be 100 or more by the end of the scenario.
*Destroid Monster
**If you did not receive it on Scenario 31, the sum of Fokker, Hikaru, and Kakizaki's killcounts must be 100 or more by the end of this scenario.
'''Unit Acquisition:'''
*Evangelion Unit 0 (Kaowru)
*Evangelion Unit 0 loses the "Lance of Longinus" attack

|-
| colspan="3" class="fc-prologue" |'''Beyond this point, losing Ideon results in a Game Over'''
|-
| colspan="3" class="fc-std-sc" |'''第５３話：出航！銀河殴り込み艦隊！ Scenario 53 - The Galactic Assault Fleet Takes Sail!'''

|-
| colspan="3" |'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' 230 enemy units shot down by turn 7. '''Secret Requirements:''' '''Unit Acquisition:'''
*All secret units and parts are given after the stage begins <ul><li>Neue Ziel OR Val Varo OR Gerbera Tetra</li><li>Quin Mantha OR Haman's Qubeley OR Mass Production Qubeley (x2)</li><li>Doven Wolf OR Geymalk</li><li>Strike Rougue IWSP</li><li>Hi-Nu Gundam</li><li>Sazabi</li><li>Destroid Monster</li><li>F-Type Equipment for Evangelion Unit 1</li><li>Atomic Bazooka parts for GP-02</li><li>Heavy Weapon System for Nu Gundam</li><li>Full Armor Parts for ZZ Gundam</li></ul>
*MP Nu Gundam
**Fin Funnel parts for MP Nu Gundam
*Gunbuster adds Kazumi as a Subpilot
**Gunbuster gains the "Super Inazuma Kick" attack
*Ra Cailum gains the "Nuclear Missile" MAP and ALL attacks

|-
| colspan="3" class="fc-std-sc" |'''第５４話：神に守られし星 Scenario 54 - The Planet Guarded by the Gods'''

|-
| colspan="3" |'''Victory Condition:'''
*1st Part: (1) Defeat all enemies; (2) The SRX Team rescues [https://akurasu.net/wiki/Super_Robot_Wars/Alpha_3/Info_Dump#Finding_Aya_on_Scenario_54 Aya]; (3) Jumora is defeated
*2nd Part: Bemidoban is defeated
'''Defeat Condition:'''
*1st Part: (1)(2) Ally battleship is defeated, Ryusei or Viletta are defeated; (3) Ally battleship is defeated, Ryusei, Viletta, Baran, or Lyria are defeated
*2nd Part: Sanger is defeated
**2nd Part (Touma Route): Touma is defeated
'''Skill Point:''' Clear the map within 10 turns, with both Hermoz defeated '''Secret Requirements:''' '''Unit Acquisition:'''
*Banpreios adds Aya as a Subpilot
**Branpreios gains the "Tenjou Tenge Nendou Musou-ken" attack
**Branpreios and R-GUN Powered gain the "Tenjou Tenge Ichigeki Hissatsu-ho" combination attack
*Shumel (Lyria)
*Bemidoban (Baran)

|-
| colspan="3" class="fc-std-sc" |'''第５５話：まつろわぬ神 Scenario 55 - The God Who Resists Order'''

|-
| colspan="3" |'''Victory Condition:'''
*1st Part: (1) Defeat all enemies; (2) Defeat Gebel GanEden
*2nd Part: (1) Defeat all enemies; (2) Defeat Gebel GanEden
'''Defeat Condition:'''
*1st Part: (1)(2) Ally battleship is defeated
*2nd Part: (1)(2) Ally battleship is defeated
'''Skill Point:''' Within 6 turns, defeat both Zfiruds '''Secret Requirements:''' '''Unit Acquisition:'''

|-
| colspan="3" class="fc-std-sc" |'''第５６話：終わりなき総力戦 Scenario 56 - Unending Total War'''

|-
| colspan="3" |'''Victory Condition:'''
*1st Part: Drowa Zan is defeated within 5 turns
*2nd Part: (1) Soloship move next to the Bairal Jinn; (2) Any unit reaches the designated point
'''Defeat Condition:'''
*1st Part: Ally battleship is defeated, 6th turn is reached
*2nd Part: (1)(2) Ally battleship is defeated
'''Skill Point:''' Clear the map within 7 turns. '''Secret Requirements:'''
*Gije & Ganga Rube
**You must pick the Fight The Buff Clan option at the end of the scenario.
*Bad Ending Route
**On New Game+, choose to fight (first option)
'''Unit Acquisition:'''

|- class="fc-route-h"
| width="40%" |'''Fight The Buff Clan''' Ideon, Getter Robo Combattler V, Voltes V, Daimos Daitarn 3 Gundam (0083, Zeta, ZZ, CCA, Wing, SEED)
| width="40%" |'''Fight The STMC''' Mazinger (Z, Great), Steel Jeeg, Raiden Goshogun, Dancouga, Gaiking Macross (DYRL, Plus, 7) Gunbuster, Evangelion, GaoGaiGar Virtual On
| width="20%" |'''Bad Ending '''

|-
| class="fc-route1" |'''第５７話：憎しみの環の中で Scenario 57 - In a Circle of Hatred'''
| class="fc-route3" |'''第５７話：終わりの始まり Scenario 57 - The Beginning of the End'''
| class="fc-prologue" |'''イデ発動ルート最終話：銀河に君と''' '''Ide Activation Final Scenario - With You In The Galaxy'''

|-
|'''Victory Condition:'''
*1st Part: (1) Defeat all enemies; (2) Soloship reaches the designated point
*2nd Part: Defeat all enemies within (11 (E) / 9 (N) / 7 (H)) turns
'''Defeat Condition:'''
*1st Part: (1)(2) All allies are defeated
*2nd Part: Turn (12 (E) / 10 (N) / 8 (H)) is reached, Ally battleship is defeated
'''Skill Point:''' Defeat all enemies within (10 (E) / 8 (N) / 6 (H)) turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Ganga Rube (Gije)

|'''Victory Condition:''' (1)(2) Defeat all enemies '''Defeat Condition:''' (1) Eltrium is defeated; (2) Ally battleship is defeated '''Skill Point:''' Defeat all enemies within 7 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Eltrium (Tashiro, Deputy Chief)

| rowspan="4" |'''Victory Condition:''' Bairal Jinn is defeated '''Defeat Condition:''' Ally battleship is defeated '''Secret Requirements:''' '''Unit Acquisition:'''

|-
| class="fc-route1" |'''第５８話：発動 Scenario 58 - Activation'''
| class="fc-route3" |'''第５８話：死闘、未来を懸けて Scenario 58 - The Mortal Struggle for the Future'''

|-
|'''Victory Condition:'''
*1st Part: Bairal Jinn is defeated
*2nd Part: Bairal Jinn is defeated
'''Defeat Condition:'''
*1st Part: Ally battleship is defeated
*2nd Part: Ally battleship is defeated
'''Skill Point:''' Destroy the Bairal Jinn within six turns. '''Secret Requirements:''' '''Unit Acquisition:'''

|'''Victory Condition:''' (1)(2) Defeat all enemies '''Defeat Condition:''' (1) Ally battleship is defeated; Drowa Zan is defeated, Ally battleship is defeated(2) '''Skill Point:''' All Buff Clan units survive the stage. '''Secret Requirements:''' '''Unit Acquisition:'''

|}
 

==Stages 59 - END==
{| width="100%"
|-
| colspan="2" class="fc-std-sc" |'''第５９話：果てしなき流れの果てに Scenario 59 - At the End of the Unending Flow'''

|-
| colspan="2" |'''Victory Condition:'''
*1st Part: Reach the 11th turn
*2nd Part: Defeat all enemies, 6th turn is reached
'''Defeat Condition:'''
*1st Part: Ally battleship is defeated, Any enemy enters the designated area
*2nd Part: Any enemy enters the designated area, Ally battleship is defeated, Noriko or Jung are defeated
'''Skill Point:''' Defeat all enemies within 5 turns. '''Secret Requirements:''' '''Unit Acquisition:'''

|- class="fc-route-h"
| width="50%" |'''Normal Ending - 56 Skill Points or less, OR turn count 421 or more'''
| width="50%" |'''Good Ending - 57 Skill Points or more AND turn count 420 or less'''

|-
| class="fc-route1" |'''最終話: 終焉の銀河 Final Scenario - A Galaxy of Death'''
| class="fc-route3" |'''最終話: 今遥か遠い彼方… Final Scenario - Now, The Faraway Yonder'''

|-
|'''Victory Condition:''' (1) ??? is destroyed; (2) Kaiser Ephres is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated '''Secret Requirements:''' '''Unit Acquisition:'''

|'''Victory Condition:''' (1) ??? is destroyed; (2)(3) Kaiser Ephres is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated; (3) Irui is defeated '''Secret Requirements:''' '''Unit Acquisition:'''
*Nashim Gan Eden (Irui)

|}

Super Robot Wars/Alpha 3/Flow Chart

2023-06-10T17:46:12Z

KomodoWork: /* Stages 45 - 48 */ They are available

Units and Pilots in Black join your team. 
Units and Pilots in Orange are available for that stage, then leave. 
Units and Pilots in Blue have special requirements. Check the [[../Secrets|Secrets]] page for more details. 
Units and Pilots in Red previously joined, but from this point, are rendered unusable. Those lost permanently are marked so, while others rejoin later on. 
Information in Green are upgrades for units already in your party.

==Stages 01 - 18==
{| width="100%"
|- class="fc-route-h"
| width="25%" |'''Touma Route'''
| width="25%" |'''Kusuha Route'''
| width="25%" |'''Cobray Route'''
| width="25%" |'''Selena Route'''

|-
| class="fc-route1" |'''第１話：闘志、炎に燃ゆる Scenario 1 - Within the Flames, Fighting Spirit Rises'''
| class="fc-route2" |'''第１話：出撃！鋼の龍虎 Scenario 1 - Launch! Dragon and Tiger of Steel'''
| class="fc-route3" |'''第１話：虚空からの転生 Scenario 1 - Reincarnated from the Void'''
| class="fc-route4" |'''第１話：シークレット・ミッション Scenario 1 - Secret Mission'''

|-
|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Any allied unit is defeated '''Skill Point:''' Defeat all enemies in 3 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Raioh (Touma)
*GaoGaiGar (Guy)
*Goldymarg (Goldymarg)
*HyoRyu (HyoRyu)
*EnRyu (EnRyu)

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Any allied unit is defeated '''Skill Point:''' Defeat all enemies in 2 turns '''Secret Requirements:'''
*Bullet
**You must be playing as Kusuha to recruit Bullet.
'''Unit Acquisition:'''
*Gouryu Kai (Kusuha)
*Raikou Kai (Bullet)
*Mazinkaiser (Kouji)
*Diana A (Sayaka)
*Shin Getter (Ryoma, Hayato, Benkei)
*Lady Command (Michiru)

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' (1) Werkbau is defeated; (2) Werkbau is defeated, ally battleship is defeated '''Skill Point:''' Defeat all enemies in 5 turns after enemy reinforcements show up '''Secret Requirements:'''
*Arado and Seolla
**You must be playing as Cobray to recruit Arado and Seolla.
'''Unit Acquisition:'''
*Werkbau (Cobray)
*Nu Gundam (Amuro)
*Ra Cailum (Bright, Torres)
*MP Nu Gundam (Kayra)
*Jegan (Katz)
*Incom & Funnel parts for MP Nu Gundam

|'''Victory Condition:''' (1) All enemies except Salamis Kai shot down; (2) R-Gun Powered shot down '''Defeat Condition:''' (1) Selena shot down, Salamis Kai shot down; (2) Selena shot down '''Skill Point:''' Defeat all enemies except the Salamis Kai in 4 turns '''Secret Requirements:'''
*Ibis and Slay
**You must be playing as Selena to recruit Ibis and Slay.
'''Unit Acquisition:'''
*AS Soleares (Selena, Elma)
*Albion (Synapse, Paserov)
*GP03 Dendrobium (Kou)
*GM Cannon II (Keith)
*GM Custom (Burning)
*GM Custom (Bate)
*GM Custom (Monsha)
*GM Cannon II (Adel)
*Zeta Gundam (Kamille)
*Re-GZ BWS (Four)
*Methuss (Fa)
*Super Gundam (Emma)
*Armed Fortress Orchis parts for Gundam Stamen
*G Defensor parts for Gundam Mk-II

|-
| class="fc-route1" |'''第２話: さらばGGG、さらば勇者 Scenario 2 - Farewell, GGG! Farewell, Braves!'''
| class="fc-route2" |'''第２話: 新たなる侵略者！立ち上がれV Scenario 2 - New Invaders! Rise Up, V!'''
| class="fc-route3" |'''第２話: 血の狼煙 Scenario 2 - Beacon Fire of Blood'''
| class="fc-route4" |'''第２話: フラッシュ・デイ Scenario 2 - Flash Day'''

|-
|'''Victory Condition:''' Defeat all enemies; Defeat ZX-01 '''Defeat Condition:''' Any allied unit is defeated '''Skill Point:''' Defeat the 4 Zonders in 2 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*GaoGaiGar (Guy)
*J-Der (J, Tomoro)
*Great Mazinger (Tetsuya)
*Venus A (Jun)
*Boss Borot (Boss, Nuke, Mucha)
*Kotetsu Jeeg (Jeeg)
*Big Shooter (Miwa)

|'''Victory Condition:''' (1) Defeat all enemies, (2) Defeat Dangel '''Defeat Condition:''' (1) Hyouma defeated (2) Any Allied Unit is defeated '''Skill Point:''' Defeat all enemies in 3 turns, do not lose any Federation Army squads '''Secret Requirements:''' '''Unit Acquisition:'''
*Combattler V (Hyoma, Juzo, Daisaku, Chizuru, Kosuke)
*Jegan (Federation Soldier) x 3

|'''Victory Condition:''' (1) Defeat the Magellan Kai-class Battleship (2) Defeat the Magellan Kai-class Battleship and Nuclear Missiles '''Defeat Condition:''' (1) Any ally unit is defeated (2) Nuclear Missiles reach the marked area on the map '''Skill Point:''' Defeat the enemy missiles and battleship in 7 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Clop-class (Federation Captain)
*Wildfalken (Seolla)
*MP Nu Gundam (Cobray)
*ZZ Gundam (Judau)
*Re-GZ BWS (Roux)
*Albion (Synapse, Paserov)
*GP03 Dendrobium (Kou)
*GM Cannon II (Keith)
*GM Custom (Burning)
*GM Custom (Bate)
*GM Custom (Monsha)
*GM Cannon II (Adel)
*Zeta Gundam (Kamille)
*Re-GZ BWS (Four)
*Methuss (Fa)
*Super Gundam (Emma)
*Armed Fortress Orchis parts for Gundam Stamen
*G Defensor Parts for Gundam Mk-II

|'''Victory Condition:''' Defeat any enemy battleship '''Defeat Condition:''' (1) Allied battleship is defeated; (2) Allied battleship is defeated, Selena is defeated '''Skill Point:''' Defeat the enemy battleship in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*ZZ Gundam (Judau)
*Re-GZ BWS (Roux)
*Nu Gundam (Amuro)
*Ra Cailum (Bright)
*Jegan (Katz)
*MP Nu Gundam (Keyra)
*AS Soleares (Selena, Elma)
*Incom & Funnel parts for MP Nu Gundam

|-
| colspan="4" class="fc-std-sc" |'''第３話: 逆襲！機界31原種 Scenario 3 - Counterattack! The 31 Machine Primevals!'''

|-
| colspan="4" |'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' (1) Ally battleship is defeated, One of the Machine Primevals reaches the edge of the map; (2) Ally battleship is defeated, One of the Machine Primevals reaches the edge of the map, J is defeated '''Skill Point:''' Defeat all enemies in 6 turns '''Secret Requirements:''' '''Unit Acquisition (Touma & Kusuha):'''
*J-Ark (J, Tomoro)
*Nu Gundam (Amuro)
*Ra Cailum (Bright, Torres)
*Jegan (Katz)
*MP Nu Gundam (Keyra)
*Albion (Synapse, Paserov)
*GP03 Dendrobium (Kou)
*GM Cannon II (Keith)
*GM Custom (Burning)
*GM Custom (Bate)
*GM Custom (Monsha)
*GM Cannon II (Adel)
*Zeta Gundam (Kamille)
*Re-GZ BWS (Four)
*Methuss (Fa)
*Super Gundam (Emma)
*Incom & Funnel parts for MP Nu Gundam
*Armed Fortress Orchis parts for Gundam Stamen
*G Defensor Parts for Gundam Mk-II
'''Unit Acquisition (Cobray & Selena):'''
*J-Ark (J, Tomoro)
*Mazinkaiser (Kouji)
*Diana A (Sayaka)
*Great Mazinger (Tetsuya)
*Venus A (Jun)
*Combattler V (Hyoma, Juzo, Daisaku, Chizuru, Kosuke)
*Koutetsu Jeeg (Jeeg)
*Big Shooter (Miwa)
*Shin Getter (Ryoma, Hayato, Benkei)
*Lady Command (Michiru)

|-
| colspan="4" class="fc-std-sc" |'''第４話：地獄門、開く Scenario 4 - The Gates of Hell Open'''

|-
| colspan="4" |'''Victory Condition:'''
*1st Part: Allied Battleship reaches the escape point in 5 turns, All Enemies are defeated in 5 turns
*2nd Part: Defeat all enemies
'''Defeat Condition:'''
*1st Part: Allied Battleship is defeated, Turn 6 starts
*2nd Part: SRX is defeated
'''Skill Point:''' Defeat all enemies in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*SRX (Damaged) (Ryuusei, Rai, Aya)

|-
| colspan="4" class="fc-std-sc" |'''第５話: 地球圏絶対防御線 Scenario 5 - The Earth Sphere’s Absolute Defense Line'''

|-
| colspan="4" |'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' (1) Ally battleship is defeated (2) Any allied unit is defeated '''Skill Point:''' Clear the stage in 6 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Mobieus Zero (Mwu)
*All Char's Counter Attack, Stardust Memory, and Zeta Gundam units are lost <ul><li>Nu Gundam(Amuro)</li><li>Ra Cailum (Bright, Torres)</li><li>MP Nu Gundam (Keyra)</li><li>Albion (Synapse, Paserov)</li><li>GP03 Dendrobium (Kou)</li><li>GM Cannon II (Keith)</li><li>GM Custom (Burning)</li><li>GM Custom (Bate)</li><li>GM Custom (Monsha)</li><li>GM Cannon II (Adel)</li><li>Zeta Gundam (Kamille)</li><li>Re-GZ BWS (Four)</li><li>Methuss (Fa)</li><li>Super Gundam (Emma)</li><li>Jegan (Katz)</li></ul>

|- class="fc-route-h"
|'''Touma Route''' Great Mazinger, Venus A, Boss Borot Steel Jeeg, Big Shooter
|'''Kusuha Route''' Getter Robo G, Lady Command Mazinger Z, Diana A Combattler V
|'''Cobray Route''' ZZ Gundam, ReGZ (BWS) Mobieus Zero
|'''Selena Route'''
|-
| class="fc-route1" |'''第６話：平和、遥か遠く Scenario 6 - A Faraway Peace'''
| class="fc-route2" |'''第６話：北米戦線、異常アリ Scenario 6 - Abnormalities on the North American Front'''
| class="fc-route3" |'''第６話：GUNDAM出撃 Scenario 6 - Gundam, Sortie'''
| class="fc-route4" |'''第６話：ザ・ビギニング Scenario 6 - The Beginning'''

|-
|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Any ally is defeated '''Skill Point:''' Defeat all enemies in 5 turns; Defeat the Yamata no Orochi last '''Secret Requirements:''' '''Unit Acquisition:'''
*GaiGar (Gai)
*Mic Sounders XIII (Mic Sounders XIII)

|'''Victory Condition:''' (1) Ally reaches the designated area; (2) Defeat all enemies '''Defeat Condition:''' Any ally defeated '''Skill Point:''' Reach target location without engaging in combat '''Secret Requirements:''' '''Unit Acquisition:'''
*Mazinkaiser → Mazinger Z (Kouji)
*Shin Getter Robo → Getter Robo G (Ryoma, Hayato, Benkei) 
*Dancouga (Shinobu, Sara, Masato, Ryo)

|'''Victory Condition:'''
*1st Part: Sigu is defeated, Vesalius is defeated
*2nd Part: Defeat all enemies 
'''Defeat Condition:'''
*1st Part: Any ally is defeated
*2nd Part: Any ally is defeated 
'''Skill Point:''' Accomplish either objective in 4 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Clop Class Battleship (Federation Officer)
*Wing Gundam Zero Kai (Heero)
*Gundam Deathscythe Hell Kai (Duo)
*Gundam Sandrock Kai (Quatre)
*Taurus (Hilde)
*Strike Gundam (Kira)

|'''Victory Condition:''' (1) AS Soleares reaches the designated point in 4 turns; (2) Defeat all enemies '''Defeat Condition:''' (1) Begin turn 5 without meeting victory conditions, Any ally is defeated; (2) Any ally is defeated '''Skill Point:''' Defeat all enemies in 4 turns and get the AS Soleares to the target square '''Secret Requirements:''' '''Unit Acquisition:'''
*CGUE (Rau)
*GINN (ZAFT Soldier) x 2
*Vesarius (Ades)

|-
| class="fc-route1" |'''第７話：燃えろ宙！妖花フローラの挑戦 Scenario 7 - Space Burns! The Enchanting Flora’s Challenge!'''
| class="fc-route2" |'''第７話：怒りの獣、野生の咆哮 Scenario 7 - The Wild Roar of the Raging Beast'''
| class="fc-route3" |'''第７話：崩壊の大地 Scenario 7 - Collapsing Land'''
| class="fc-route4" |'''第７話：ワンズ・ジャスティス Scenario 7 - One’s Own Justice'''

|-
|'''Victory Condition:''' 
*1st Part: Defeat all enemies
*2nd Part: Defeat all enemies
'''Defeat Condition:''' 
*1st Part: Any ally defeated
*2nd Part: Any ally defeated
'''Skill Point:''' Defeat all enemies in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*AnRyu (AnRyu)
*KouRyu (KouRyu)

|'''Victory Condition:''' (1) Defeat all enemies; (2) Defeat Dangel '''Defeat Condition:''' Any ally is defeated '''Skill Point:''' Defeat all Zubanzas, Boazan Flying Saucers, and Red Baloms within 4 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Black Wing (Alan)

|'''Victory Condition:''' (1) Defeat all enemies; (2) Archangel reaches the designated point, Defeat all enemies '''Defeat Condition:''' (1) Mwu is defeated; (2) Ally battleship is defeated, Kira or Mwu are defeated '''Skill Point:''' Defeat all enemies in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Strike Gundam (Kira)
*Archangel (Murrue, Natarle)
*Aile, Sword and Launcher Striker packs for Strike Gundam

|'''Victory Condition:''' Any ally reaches the designated point '''Defeat Condition:''' Any ally is defeated '''Skill Point:''' Defeat all enemies in 5 turns and get an allied unit to the target square '''Secret Requirements:''' '''Unit Acquisition:'''
*Altron Gundam (Wufei)
*Gundam Heavyarms Kai (Trowa)
*CGuE (Rau)
*Vesarius (Ades)
*Aegis Gundam (Athrun)
*Blitz Gundam (Nicol)
*Buster Gundam (Dearka)
*Duel Gundam (Yzak)

|-
| class="fc-route1" |'''第８話：立ち上がれ！勇気ある者達 Scenario 8 - Stand Up, People of Courage!'''
| class="fc-route2" |'''第８話：輝け！不死身の勇者 Scenario 8 - Shine, Undying Hero!'''
| class="fc-route3" |'''第８話：誘う声 Scenario 8 - An Inviting Voice'''
| class="fc-route4" |'''第８話：インビジブル・イントルーダー Scenario 8 - Invisible Intruder'''

|-
|'''Victory Condition:''' (1) Defeat all enemies; (2) ZX-02 is defeated '''Defeat Condition:''' (1) Any ally is defeated; (2) Gai is defeated, J is defeated '''Skill Point:''' Defeat all enemies in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*GaiGar → GaoGaiGar
*Mic Sounders XIII gains "Disc P", "Disc M", and "Disc X" attacks
*Goldymarg (Goldymarg)
*HyoRyu (HyoRyu)
*EnRyu (EnRyu)
*Big Volfogg (Big Volfogg)

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' (1) Any ally is defeated; (2) Akira is defeated '''Skill Point:''' Defeat the Bramble (retreats at 4000HP (E) / 6000HP (N) / 8000HP (H)) '''Secret Requirements:''' '''Unit Acquisition:'''
*Raideen (Akira)
*Bluegar (Jinguji, Mari)

|'''Victory Condition:'''
*1st Part: (1) Vesalius is defeated; (2) Defeat all enemies
*2nd Part: (1) Defeat all enemies; (2) Defeat all enemies except Valk Baal 
'''Defeat Condition:'''
*1st Part: Ally battleship is defeated, Seolla or Cobray are defeated
*2nd Part: Any ally is defeated 
'''Skill Point:''' Defeat Aegis, Duel, Buster, and Blitz Gundams in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Zeta Gundam (Kamille)
*Re-GZ BWS (Four)
*Methuss (Fa)
*Super Gundam (Emma)
*Ra Cailum (Bright, Torres)
*MP Nu Gundam (Cobray)
*Werkbau (Cobray)
*G Defensor parts for Gundam Mk-II

|'''Victory Condition:''' Reach turn 6 '''Defeat Condition:''' Any ally is defeated '''Skill Point:''' Defeat all the Jegans '''Secret Requirements:''' '''Unit Acquisition:'''
*CGuE (Rau)
*Vesarius (Ades)
*Aegis Gundam (Athrun)
*Blitz Gundam (Nicol)
*Buster Gundam (Dearka)
*Duel Gundam (Yzak)

|-
| class="fc-route1" |'''第９話：内なる修羅 Scenario 9 - Demons of War Within'''
| class="fc-route2" |'''第９話：再会！ニューヨーク解放戦 Scenario 9 - Reunion! The Battle to Retake New York'''
| class="fc-route3" |'''第９話：正義の在処 Scenario 9 - Where Justice Can Be Found'''
| class="fc-route4" |'''第９話：アベンジャー Scenario 9 - Avenger'''

|-
|'''Victory Condition:''' (1) Defeat all enemies; (2) Defeat Raioh '''Defeat Condition:''' (1) Any ally defeated; (2) Sanger is defeated '''Skill Point:''' Defeat the Bramble in 4 turns (retreats at 4000HP (E) / 6000HP (N) / 8000HP (H)) '''Secret Requirements:''' '''Unit Acquisition:'''
*Dygenguar (Sanger)
*Huckebein Mk-III Trombe (Ratsel)
*Raideen (Akira)
*Bluegar (Jingunji, Mari)
*Mazinger Z (Kouji)
**Mazinger Z (Kouji) and Great Mazinger (Tetsuya) gain the "Double Mazinger Blade" and "Double Burning Fire" combination attacks
*Diana A (Sayaka)
*Getter Robo G (Ryoma, Hayato, Benkei)
*Lady Command (Michiru)
*Combattler V (Hyoma, Juzo, Daisaku, Chizuru, Kosuke)

|'''Victory Condition:''' (1) Defeat all enemies; (2) Dancouga reaches the designated point; (3) Defeated Deathgaia, Dangel, and Warchamedes '''Defeat Condition:''' (1) Shinobu, Kusuha, or Bullet are defeated; (2) Shinobu, Kusuha, Bullet, or Alan are defeated; (3) Alan is defeated '''Skill Point:''' Clear the map in 8 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Black Wing (Alan)
*Dygenguar (Sanger)
*Huckebein Mk-III Trombe (Ratsel)

|'''Victory Condition:''' (1) Vesalius is defeated; Reduce the Muge Battleship under 2000 HP before it reaches the edge of the map '''Defeat Condition:''' (1) Ally battleship is defeated; (2) Muge Battleship reaches the western edge of the map '''Skill Point:''' Defeat all enemies before reducing the Muge Mothership's HP below 2000 or defeating it '''Secret Requirements:''' '''Unit Acquisition:'''

|'''Victory Condition:''' (1) Reduce the Archangel's HP to 50% or less, Defeat all enemies besides the Archangel; (2) Reduce the Varuch Ishar to 4000 HP or less. '''Defeat Condition:''' Any ally is defeated '''Skill Point:''' Defeat the Varuch Ishar (flees at 4000 HP) '''Secret Requirements:''' '''Unit Acquisition:'''
*CGuE (Rau)
*Vesarius (Ades)
*Aegis Gundam (Athrun)
*Blitz Gundam (Nicol)
*Buster Gundam (Dearka)
*Duel Gundam (Yzak)

|-
| class="fc-route1" |'''第１０話：激震の地底帝国 Scenario 10 - Tremors in the Underground Empire'''
| class="fc-route2" |'''第１０話：龍を喰らうもの Scenario 10 - That Which Devours the Dragon'''
| class="fc-route3" |'''第１０話：消えていく光 Scenario 10 - The Fading Light'''
| class="fc-route4" |'''第１０話：グッバイ・フレンズ Scenario 10 - Goodbye, Friends'''

|-
|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' All allies defeated, Science Fortress Lab destroyed '''Skill Point:''' Clear the map without the Science Fortress Lab taking damage '''Secret Requirements:''' '''Unit Acquisition:'''
*Raioh loses the "System LIOH" ability
*Raioh gains the "Rising Meteor" attack
*Dygenguar (Sanger)
*Huckebein Mk-III Trombe (Ratsel)

|'''Victory Condition:''' (1) Sanger is defeated; (2)(3) Defeat all enemies; (4)(5) ZX-02 is defeated '''Defeat Condition:''' (1) Bullet is defeated; (2) Sanger or Rastel are defeated; (3) Any ally is defeated; (4) Guy, Sanger, or Rastel are defeated; (5) Guy, J, Sanger, or Rastel are defeated '''Skill Point:''' Reduce Shin RyuOuKi to below 10000 HP within 3 turns of its arrival '''Secret Requirements:''' '''Unit Acquisition:'''
*Dygenguar (Sanger)
*Huckebein Mk-III Trombe (Ratsel)
*GaiGar (Guy)
*GaoGaiGar (Guy)
*Mic Sounders XIII (Mic Sounders XIII)
*Goldymarg (Goldymarg)
*HyoRyu (HyoRyu)
*EnRyu (Enryu)
*Volfogg (Volfogg)
*Great Mazinger (Tetsuya)
*Venus A (Jun)
*Boss Borot (Boss, Mucha, Nuke)
*Kotetsu Jeeg (Jeeg)
*Big Shooter (Miwa)
*Stealth Gao II parts for GaoGaiGar
*Gunbot parts for Volfogg

|'''Victory Condition:''' (1) Reduce the Blitz Gundam to under 7000HP; (2) The Gamow is defeated; (3) The Gamow is defeated and Imperial Guard are defeated '''Defeat Condition:''' (1)(2) Any ally is defeated; (3) Ally battleship is defeated '''Skill Point:''' Defeat the Gamow (retreats at 4000HP (E) / 6000HP (N) / 8000HP (H)) '''Secret Requirements:''' '''Unit Acquisition:'''
*Qubeley Mk-II (Puru)
*Qubeley Mk-II (Puru Two)
*Hyaku Shiki (Beecha)
*Gundam Mk-II (Elle)
*Jegan (Mondo)
*Megarider (Iino)
*YF-19 (Isamu)
*YF-21 (Guld)

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' (1) Any ally is defeated; (2) Ally battleship is defeated; (3) Ally battleship is defeated, Isamu or Guld are defeated '''Skill Point:''' Clear the map in 6 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Zeta Gundam (Kamille)
*Methuss (Fa)
*ReGZ (Four)
*Super Gundam (Emma)
*Mobius Zero (Mwu)
*Wing Gundam Zero Kai (Heero)
*Gundam Sandrock Kai (Quatre)
*Gundam Deathscythe Hell Kai (Duo)
*Taurus (Hilde)
*ZZ Gundam (Judau)
*ReGZ BWS (Roux)
*Qubeley Mk-II (Puru)
*Qubeley Mk-II (Puru Two)
*Hyaku Shiki (Beecha)
*Gundam Mk-II (Elle)
*Jegan (Mondo)
*Megarider (Iino)
*YF-19 (Isamu)
*YF-21 (Guld)

|-
| class="fc-route1" |'''第１１話：戦場の邂合、そして決別 Scenario 11 - An Battlefield Encounter, and Then a Departure'''
| class="fc-route2" |'''第１１話：新たなる人類 Scenario 11 - A New Mankind'''
| class="fc-route3" |'''第１１話：君と戦場で Scenario 11 - On the Battlefield with You'''
| class="fc-route4" |'''第１１話：パワー・ジャンクション Scenario 11 - Power Junction'''

|-
|'''Victory Condition:''' (1) Defeat all enemies; (2) Defeat Vesalius '''Defeat Condition:''' Ally battleship is defeated, Kira or Mwu are defeated '''Skill Point:''' Defeat all enemies in 7 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Archangel (Murrue)
*Strike Gundam (Kira)
*Moebius Zero (Mwu)
*Stealth Gao II Parts for GaoGaiGar
*Aile, Sword, and Launcher Striker packs for Strike Gundam

|'''Victory Condition:''' (1) Defeat all enemies; (2) Vesalius is defeated '''Defeat Condition:''' (1) Ally battleship is defeated, Kira or Mwu are defeated; (2) Ally battleship is defeated '''Skill Point:''' Defeat all enemies in 7 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Strike Gundam (Kira)
*Mobeius Zero (Mwu)
*Archangel (Murrue, Natarle)
*YF-19 (Isamu)
*YF-21 (Guld)
*Aile, Sword, and Launcher Striker packs for Strike Gundam

|'''Victory Condition:''' (1) Defeat all enemies (2) ZX-02 is defeated '''Defeat Condition:''' (1) Kira is defeated; (2) Any ally is defeated '''Skill Point:''' Defeat all enemies in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Wildburger (Arado)
*Great Mazinger (Tetsuya)
*Venus A (Jun)
*Boss Borot (Boss)
*Dancouga (Shinobu, Sarah, Masato, Ryo)
*Raideen (Akira)
*Bluegar (Jingunji)
*Mazinger Z (Kouji)
*Diana A (Sayaka)
*Getter Robo G (Ryoma, Hayato, Benkei)
*Lady Command (Michiru)
*Star Gaogaigar (Gai)
*Goldymarg (Goldymarg)
*Mic Sounders the 13th (Mic)
*Hyoryu (Hyoryu)
*Enryu (Enryu
*Big Volfogg (Volfogg)

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Defeat all enemies in 7 turns '''Secret Requirements:''' '''Unit Acquisition:'''

|-
| class="fc-route1" |'''第１２話：守るべきモノ Scenario 12 - What You Must Protect'''
| class="fc-route2" |'''第１２話：別れの宇宙 Scenario 12 - Farewells in Space'''
| class="fc-route3" |'''第１２話：ディーンの火 Scenario 12 - The Flames of Deen'''
| class="fc-route4" |'''第１２話：コンクルージョン Scenario 12 - Conclusion'''

|-
|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' All enemies defeated '''Skill Point:''' Defeat all enemies in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Gundam Wing Zero (Heero)
*Gundam Deathscythe Hell Kai (Duo)
*Gundam Sandrock Kai (Quatre)
*Gundam Heavyarms Kai (Trowa)
*Altron Gundam (Wufei)
*Taurus (Hilde)
*Zeta Gundam (Kamille)
*Re-GZ BWS (Four)
*Methuss (Fa)
*Gundam Mk-II (Emma)
*ZZ Gundam (Judau)
*Qubeley Mk-II (Puru)
*Qubeley Mk-II (Puru Two)
*Hyaku Shiki (Beecha)
*Gundam Mk-II (Elle)
*Jegan (Mondo)
*Megarider (Iino)
*YF-19 (Isamu) (After stage)
*YF-21 (Guld) (After stage)
*G Defensor parts for Gundam Mk-II

|'''Victory Condition:''' (1) Defeat all enemies; (2) Defeat Shin RyoOhKi; (3) Defeat the Imperial Guard '''Defeat Condition:''' (1)(2) Any ally is defeated; (3) Ally battleship is defeated '''Skill Point:''' Defeat Shin RyuOhKi before Victory Conditions are met '''Secret Requirements:''' '''Unit Acquisition:'''
*Gundam Wing Zero Kai (Heero)
*Gundam Deathscythe Hell Kai (Duo)
*Gundam Sandrock Kai (Quatre)
*Gundam Heavyarms Kai (Trowa)
*Altron Gundam (Wufei)
*Taurus (Hilde)
*Zeta Gundam (Kamille)
*Re-GZ BWS (Four)
*Methuss (Fa)
*Gundam Mk-II (Emma)
*ZZ Gundam (Judau)
*Qubeley Mk-II (Puru)
*Qubeley Mk-II (Puru Two)
*Hyaku Shiki (Beecha)
*Gundam Mk-II (Elle)
*Jegan (Mondo)
*Megarider (Iino)
*G Defensor parts for Gundam Mk-II

|'''Victory Condition:''' (1) Bramble, Magnum, and Zangaioh are defeated; (2) Defeat all enemies; (3) Defeat Valk Baal '''Defeat Condition:''' (1) Ally battleship is defeated, Arado is defeated; (2) Cobray, Arado or Seolla are defeated; (3) Cobray, Viletta, Sanger, or Rastel are defeated '''Skill Point:''' Clear the map in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Werkbau gains the "Axion Buster" attack
*Gundam Heavyarms Kai (Trowa)
*Altron Gundam (Wufei)
*Dygenguar (Sanger)
*Huckebein Mk-III Trombe (Ratsel)
*R-GUN Powered (Viletta)

|'''Victory Condition:''' (1)(2) ZX-08 is defeated; (3) Varuch Ishar is defeated '''Defeat Condition:''' (1) Ally battleship is defeated, (2) Ally battleship is defeated, J is defeated; (3) Ally battleships is defeated, Selena, Viletta, Sanger, or Rastel are defeated '''Skill Point:''' Defeat ZX-02 in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*J-ARK (J, Tomoro)
*R-GUN Powered (Viletta)
*Dygenguar (Sanger)
*Huckebein Mk-III Trombe (Ratsel)
*Vegalion (Slay)

|-
| colspan="4" class="fc-std-sc" |'''第１３話：もう一度、自らの足で Scenario 13 - Once Again, On Your Feet'''

|-
| colspan="4" |'''Victory Condition:''' ZX-06 is defeated '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Clear the map in 6 turns; Defeat all other enemies before ZX-06 '''Secret Requirements:''' '''Unit Acquisition:'''
*Evangelion Unit 0 Custom (Rei)
*Evangelion Unit 1 (Shinji)
*Evangelion Unit 2 (Asuka)

|-
| colspan="4" class="fc-std-sc" |'''第１４話：オペレーション・ハルパー Scenario 14 - Operation Harper'''

|-
| colspan="4" |'''Victory Condition:''' Reduce Hermoz Ehad's HP to below 120000HP (E) / 90000HP (N) / 80000HP (H) '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Achieve the victory condition in 7 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*HyoRyu (HyoRyu)
*EnRyu (EnRyu)

|-
| colspan="4" class="fc-std-sc" |'''第１５話：遥かなる凱歌 Scenario 15 - A Faroff Victory Song'''

|-
| colspan="4" |'''Victory Condition:''' Defeat the Combine Primeval '''Defeat Condition:''' Ally Battleship is defeated, J is defeated '''Skill Point:''' Defeat all enemies in 7 turns, leaving the combined Primeval for last '''Secret Requirements:''' '''Unit Acquisition:'''
*J-Ark (J, Tomoro)
*ALL units are unavailable until clearing Scenario 18

|-
| colspan="4" class="fc-std-sc" |'''第１６話：導かれる魂、銀河で Scenario 16 - Souls Guided by the Galaxy'''

|-
| colspan="4" |'''Victory Condition:'''
*1st Part: Defeat all enemies
*2nd Part: Defeat all enemies
'''Defeat Condition:'''
*1st Part: Ideon is defeated
*2nd Part: Any ally is defeated
'''Skill Point:''' Defeat all enemies in 4 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Ideon (Cosmo, Kasha, Bess → Moera)
*VF-17S Nightmare (Kinryu)
*VF-17D Nightmare (Gamlin)
*VF-17D Nightmare (Docker)
*Battle 7 (Max, Exedore, Miho, Sally)
*Soloship (Bess)

|-
| colspan="4" class="fc-std-sc" |'''第１７話：ディスコード・ハーモニー Scenario 17 - Discord / Harmony'''

|-
| colspan="4" |'''Victory Condition:''' (1)(2) Defeat the Zig Mac; (3) Defeat FZ-109F Elgarthorn '''Defeat Condition:''' (1) Any ally is defeated; (2) Any ally is defeated, Zig Mac moves next to the Soloship (3) '''Skill Point:''' Meet victory the condition in 4 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Battle 7 can now transform into "Enhanced Attack Mode"
*VF-17D Nightmare (Docker)

|-
| colspan="4" class="fc-std-sc" |'''第１８話：銀河流浪 Scenario 18 - Galactic Wandering'''

|-
| colspan="4" |'''Victory Condition:'''
*1st Part: Defeat FZ-109F Elgarthorn
*2nd Part: Defeat Zig Mac
'''Defeat Condition:'''
*1st Part: Any ally is defeated
*2nd Part: Any ally is defeated
'''Skill Point:''' Meet victory conditions in 3 turns '''Secret Requirements:'''
*Duel Gundam
**Take the Earth Route
*VF-1J S Valkyrie
**Take the Earth Route
*LaGOWE
**Take the Earth Route
'''Unit Acquisition:'''
*VF-17D Nightmare (Physica)
*VF-17S (Kinryu), VF-17D (Gamlin), and VF-17D (Physica) gain the "Diamond Force Attack" combination Attack
*Ideon gains the "Omnidirectional Missile" attack
*All Ideon and Macross 7 units are lost <ul><li>Ideon (Cosmo, Kasha, Moera)</li><li>Soloship (Bess)</li><li>Battle 7 (Max, Exedore, Miho, Sally)</li><li>VF-17S Nightmare (Kinryu)</li><li>VF-17D Nightmare (Physica)</li><li>VF-17D Nightmare (Gamlin)</li>

|}
 

==Stages 19 - 33==
{| width="100%"
|- class="fc-route-h"
| width="50%" |'''Descend to Earth''' Gundam 0083 Gundam Z ZZ Gundam Char's CounterAttack Gundam Wing Gundam SEED Macross 7 Macross Plus Evangelion
| width="50%" |'''Mount a Lunar offensive''' GaoGaiGar Ideon Mazinger (Z, Great) Getter Robo Steel Jeeg Combattler V Gaiking Raideen Dancouga GoShogun

|-
| class="fc-route1" |'''第１９話：宇宙に降る星 Scenario 19 - Stars Falling in Space'''
| class="fc-route3" |'''第１９話：悪夢への招待状 Scenario 19 - A Written Invitation to a Nightmare'''

|-
|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated, Kira is defeated '''Skill Point:''' Destroy all enemies in 6 turns '''Secret Requirements:'''
*Duel Gundam
**Destroy Yzak.
'''Unit Acquisition:'''
*Nu Gundam (Amuro)
*Jegan (Katz)
*MP Nu Gundam (Kayra)
*Incom and Fin Funnel parts for MP Nu Gundam
*Kira unlocks the SEED pilot skill
*Skygrasper
*Ra Cailum (Bright, Torres)

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Destroy the Muge battleship in 6 turns (retreats at 6000HP (E) / 8000HP (N) / 10000 HP (H)) '''Secret Requirements:''' 
'''Unit Acquisition:'''
*Daiku Maryu (Pete, Midori)
*Gaiking (Sanshiro)
*Skylar (Fan Li)
*Bazolar (Yamagatake)
*Nesser (Bunta)

|-
| class="fc-route1" |'''第２０話：強襲、砂漠の虎 Scenario 20 - Assault of the Desert Tiger'''
| class="fc-route3" |'''第２０話：異邦人達の帰還 Scenario 20 - The Foreigners Return'''

|-
|'''Victory Condition:''' Defeat the Lesseps '''Defeat Condition:''' Ally battleship is defeated, Kira is defeated '''Skill Point:''' Defeat the Lesseps in 6 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Kira unlocks the SEED pilot skill
*Albion (Synapse, Paserov)
*Gundam Stamen (Kou)
*GM Cannon II (Keith)
*GM Custom (Burning)
*GM Custom (Bate)
*GM Custom (Monsha)
*GM Cannon II (Adel)
*Gundam GP01fb
*Armed Base Orchis parts for Gundam Stamen

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Destroy Helmut's Muge battleship in 4 turns (retreats at 6000HP (E) / 8000HP (N) / 10000 HP(H)) '''Secret Requirements:''' '''Unit Acquisition:'''
*Ideon (Cosmo, Kasha, Moera)
*Ideon gains the "Ideon Sword" and "Ideon Sword (MAP)" attacks
*Soloship (Bess, Hatari)

|-
| class="fc-route1" |'''第２１話：プリティ・デビル Scenario 21 - Pretty Devil'''
| class="fc-route3" |'''第２１話：裏切りの代償 Scenario 21 - The Cost of Betrayal'''

|-
|'''Victory Condition:'''
*1st Part: Gigil's ship is defeated
*2nd Part: Gigil's ship is defeated 
'''Defeat Condition:'''
*1st Part: Any ally is defeated
*2nd Part: Basara is defeated
'''Skill Point:''' Destroy Gigil before he moves adjacent to Sivil '''Secret Requirements:'''
*LaGOWE
**Waltfeld and Dacosta must both survive and get a combined total of 10 kills or more on the first half of the scenario.
*VF-1J
**Milia must get a total of 10 kills in the first half of the scenario.
'''Unit Acquisition:'''
*VF-17S Nightmare (Kinryu)
*VF-17D Nightmare (Gamlin)
*VF-17D Nightmare (Physica)
*VF-1J S Valkyrie (Milia)
*LaGOWE (Waldfelt)
*BuCUE (Dacosta)
*Skygrasper (Cagalli)
*VF-19 Kai Fire Valkyrie (Basara)
*VF-17S Nighmare (Milia)
*VF-1J S Valkyrie

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Any ally is defeated '''Skill Point:''' Destroy all enemies in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Goshogun (Shingo, Killy, Remi)
*Good Thunder (Sabranth)

|-
| class="fc-route1" |'''第２２話：砂塵の果て Scenario 22 - Beyond the Clouds of Sand'''
| class="fc-route3" |'''第２２話：発動する力、無限大 Scenario 22 - Infinite Activation Power'''

|-
|'''Victory Condition:''' (1) Defeat the Lesseps; (2) Waltfeld is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated '''Skill Point:''' Defeat the Lesseps in 5 turns '''Secret Requirements:'''
*LaGOWE
**Kira must destroy Waltfeld's LaGOWE while in SEED. (Kira has to activate SEED mode before the event that ends the stage.)
'''Unit Acquisition:'''
*Kira unlocks the SEED pilot skill

|'''Victory Condition:''' (1) Soloship reaches the computer facility; (2) Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Get the Soloship to the indicated area in 4 turns without it taking any damage '''Secret Requirements:''' '''Unit Acquisition:'''
*HyoRyu (HyoRyu)
*EnRyu (EnRyu)

|-
| class="fc-route1" |'''第２３話：エモーション・ハイ Scenario 23 - Emotion High'''
| class="fc-route3" |'''第２３話：決戦！地獄の月荒野 Scenario 23 - Decisive Battle in the Hellish Lunar Wilderness!'''

|-
|'''Victory Condition:''' (1) Defeat 2 Ghosts; (2) Defeat all enemies; (3) Basara sings to Sivil, All ZAFT forces are defeated '''Defeat Condition:''' (1) Ally battleship is defeated, Battle 7 is defeated; (2) Ally battleship is defeated, Battle 7 is defeated, Isamu or Guld are defeated; (3) Ally battleship is defeated, Isamu, Guld, or Basara are defeated '''Skill Point:''' Clear the map in 9 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*YF-19's "Full Volley" attacks gains +200 Attack power
*YF-19 and YF-21 gain the "Double Pinpoint Barrier Punch" combination attack
*Battle 7 (Max, Exedore, Miho, Sally)
*VF-19 Kai Fire Valkyrie (Basara)
*Mazinkaiser
*Shin Getter Robo

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Clear the map in 9 turns '''Secret Requirements:''' '''Unit Acquisition:'''

|-
| colspan="2" class="fc-std-sc" |'''第２４話：戦神の星で Scenario 24 - On the Planet of the War God'''

|-
| colspan="2" |'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' (1) Any ally is defeated; (2) Ally battleship is defeated '''Skill Point:''' Destroy all enemies in 3 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*VF-19 Kai Fire Valkyrie (Basara)
*VF-11 MAXL Kai (Mylene)
*VF-17 Kai Nightmare (Ray, Veffidas)
*Tallgeese III (Zechs)
*Taurus (Noin)
*Voltes V (Kenichi, Ippei, Daijiroh, Hiyoshi, Megumi)
*Daimos (Kazuya)
*Garuba FX-II (Kyoshiro, Nana)

|-
| colspan="2" class="fc-std-sc" |'''第２５話：選ばれし者、選びし者 Scenario 25 - Those Who Are Chosen, Those Who Choose'''

|-
| colspan="2" |'''Victory Condition:''' (1) Hermos is defeated; (2) Zifrud is defeated '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Clear the map in 8 turns '''Secret Requirements:''' '''Unit Acquisition:'''

|-
| colspan="2" class="fc-std-sc" |'''第２６話：かりそめの旅人 Scenario 26 - Transitory Traveler'''

|-
| colspan="2" |'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated, Temjin, Fei Yen, or Apharmd are defeated '''Skill Point:''' Destroy all enemies in 3 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Temjin 747J (Chief)
*Fei Yen the Knight (Fei)
*Apharmd The Hatter (The Hatter)

|-
| colspan="2" class="fc-std-sc" |'''第２７話：勇気ある者達の誓い Scenario 27 - The Oath of the Courageous'''

|-
| colspan="2" |'''Victory Condition:'''
*1st Part: Defeat all enemies
*2nd Part: (1) Defeat all enemies; (2) Defeat the Z-Master within (10 (E) / 7 (N) / 5 (H)) turns 
'''Defeat Condition:'''
*1st Part: Ally battleship is defeated, Gai is defeated
*2nd Part: (1) Ally battleship is defeated, Gai or J are defeated; (2) (10 (E) / 7 (N) / 5 (H)) turns have passed, Ally battleship is defeated, Gai or J are defeated 
'''Skill Point:''' Destroy all enemies in 7 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*J-Ark (J, Tomoro)

|-
| colspan="2" class="fc-std-sc" |'''第２８話：いつか星の海へ Scenario 28 - Someday, In the Sea of Stars'''

|-
| colspan="2" |'''Victory Condition:''' (1)(2) Defeat the Zonder Robo; (3) Defeat the Zonder Robo within 6 attacks from Star GaoGaiGar; (4)(5) Defeat all enemies '''Defeat Condition:''' (1) Galeon is defeated; (2) Ally battleship is defeated, Galeon is defeated; (3) Ally battleship or Gai are defeated, Zonder Robo is not defeated within 6 attacks from Star GaoGaiGar (4) Main Character is defeated; (5) Ally battleship is defeated '''Skill Point:''' Destroy the Zonuder Robo in 5 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Galeon (Galeon)
*Star GaoGaiGar/GaoGaiGar (Gai)
*YF-19 (Isamu)
*YF-21 (Guld)
*Battle 7 (Max)
*VF-17S Nightmare (Milia)
*VF-17D Nightmare (Gamlin)
*VF-17D Nightmare (Physica)
*VF-19 Kai Fire Valkyrie (Basara)
*VF-11 MAXL Kai (Mylene)
*VF-17 Kai Nightmare (Ray, Veffidas)
*HyoRyu (HyoRyu)
*EnRyu (EnRyu)
*Goldymarg (Goldymarg)
*Volfogg (Volfogg)
*Mic Sounders XIII (Mic Sounder XIII)
*Ideon (Cosmo, Kasha, Moera)
*Soloship (Bess, Hatari)
*Star GaoGaiGar (Guy, Choryujin, Goldymarg, Mic, Volfogg)
*Dygenguar (Sanger)
*Aussenseiter (Ratsel)
*R-Blade Custom (Ryusei)
*R-Gun Powered (Viletta)

|-
| colspan="2" class="fc-std-sc" |'''第２９話：押された烙印 Scenario 29 - Branded with the Mark'''

|-
| colspan="2" |'''Victory Condition:''' (1)(2) Defeat all enemies '''Defeat Condition:''' (1) Ally battleship is defeated; (2) Ally battleship is defeated, Cagalli is defeated '''Skill Point:''' Destroy all enemies in 6 turns '''Secret Requirements:'''
*Destroid Monster
**Take the Space Route
*FBz-99G
**Take the Space Route
*Strike Rouge IWSP
**Cagalli must have 30 or more kills by the end of this stage.
***Take the Alaska Route
*Duel Gundam
**Take the Alaska Route
'''Unit Acquisition:'''
*GaoFighGar (Guy)
*HyoRyu (HyoRyu)
*EnRyu (EnRyu)
*Goldymarg (Goldymarg)
*Volfogg (Volfogg)/Big Volfogg (Big Volfogg)
*Mic Sounders XIII (Mic Sounders XIII)
*AnRyu (AnRyu)
*KouRyu (KouRyu)
*Ra Cailum (Bright, Torres)

|- class="fc-route-h"
|'''Head to Alaska''' Gundam (0083, Z, ZZ, CCA, Wing, SEED) Daitarn 3 Mazinger (Z, Great) Steel Jeeg Voltes V Daimos Dancouga Evangelion
|'''Go to Space''' GaoGaiGar Ideon Getter Robo Combattler V GaiKing Raideen Goshogun Macross (DYRL, 7, Plus) Virtual On

|-
| class="fc-route2" |'''第３０話：終わらない閃光 Scenario 30 - Unending Flashes of Light'''
| class="fc-route4" |'''第３０話：ロスト・ディーヴァ Scenario 30 - Lost Diva'''

|-
|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated, Kira is defeated '''Skill Point:''' Clear the map in 7 turns '''Secret Requirements:'''
*Strike Rouge IWSP
**Mwu must defeat Dearka
**After the event, Kira must defeat Athrun while both are in SEED.
'''Unit Acquisition:'''
*Skygrasper (Cagalli)
*Strike Gundam (Kira)
*Kira unlocks the SEED pilot skill
*Cagalli unlocks the SEED pilot skill (needs verification)
*Archangel loses Natarle as a subpilot

|'''Victory Condition:''' (1)(2) Defeat all enemies '''Defeat Condition:''' (1) Any ally is defeated: (2) Ally battleship is defeated, Fire Bomber, Diamond Force, or Skull Squadron are defeated '''Skill Point:''' In 6 turns, destroy Glavil and Gavil. You must destroy Glavil before Gavil '''Secret Requirements:'''
*Gavil and FBz-99G Zaubergeran
**Gamlin must defeat Gavil
'''Unit Acquisition:'''
*YF-19 (Isamu) (Before Deploying)
*YF-21 (Guld) (Before Deploying)
*VF-1S S Valkyrie (Focker)
*VF-1S S Valkyrie (Hikaru)
*VF-1A S Valkyrie (Kakizaki)
*VF-17D Nightmare (Gamlin)
*VF-17D Nightmare (Physica)
*VF-19 Kai Fire Valkyrie (Basara)
*VF-11 MAXL Kai (Mylene)
*VF-17 Kai Nightmare (Ray, Veffidas)

|-
| class="fc-route2" |'''第３１話：青き清浄なる世界のために Scenario 31 - For Our Blue & Pure World'''
| class="fc-route4" |'''第３１話：禁断の惑星へ Scenario 31 - To the Forbidden Planet'''

|-
|'''Victory Condition:''' (1) Defeat all enemies; (2)(3) Defeat all Mobile Dolls, All ZAFT Units retreat '''Defeat Condition:''' (1)(2) Ally battleship is defeated, Heero is defeated; (3) Ally battleship is defeated '''Skill Point:''' Do not let a single ZAFT machine get shot down '''Secret Requirements:'''
*Duel Gundam
**Yzak must survive the scenario.
'''Unit Acquisition:'''
*Archangel gains Newman as a subpilot
*Freedom Gundam (Kira)
*Daitarn 3 (Banjo)
*Black Wing (Alan)

|'''Victory Condition:'''
*1st Part: Defeat all enemies
*2nd Part: Defeat Gepelnitch
'''Defeat Condition:'''
*1st Part: Any ally is defeated
*2nd Part: Ally battleship is defeated, Basara or Gamlin are defeated
'''Skill Point:''' In 7 turns, destroy Glavil and Gavil and make Gepelnitch's ship retreat (at 50,000 HP) '''Secret Requirements:'''
*Destroid Monster
**Get the Skill Point on this stage.
*Gavil and FBz-99G Zaubergeran
**Gamlin must defeat Gavil 
'''Unit Acquisition:'''
*Destroid Monster

|-
| class="fc-route2" |'''第３２話：守護神の巫女 Scenario 32 - Priestess of the Guardian God'''
| class="fc-route4" |'''第３２話：インフィニティ・ソウル Scenario 32 - Infinity Soul'''

|-
|'''Victory Condition:''' (1)(2) Defeat all enemies '''Defeat Condition:''' Any Ally is defeated; Ally battleship is defeated, Sanger or Rastel are defeated '''Skill Point:''' In 5 turns, destroy the General of Hell or Flora. '''Secret Requirements:''' '''Unit Acquisition:'''
*Dygenguar (Sanger)
*Assenseiter (Ratsel)

|'''Victory Condition:''' (1) Valgo is defeated; (2)(3) Defeat all enemies '''Defeat Condition:''' (1) Mylene, Ray, or Gamlin are defeated; (2) Basara, Mylene, Ray, or Gamlin are defeated; (3) Ideon is defeated '''Skill Point:''' In 6 turns, destroy Valgo '''Secret Requirements:'''
*Gavil and FBz-99G Zaubergeran
**Gamlin must defeat Gavil 
'''Unit Acquisition:'''
*VF-17D Nightmare → VF-17S Nightmare (Gamlin)
*VF-17D Nightmare (Docker)
**VF-17S (Gamlin), VF-17D (Physica) and VF-17D (Docker) gain the "Diamond Force Attack" combination attack
*VF-19 Kai Fire Valkyrie, VF-11 MAXL Kai, and VF-17 Kai Nightmare gain the "Sound Booster" mech ability
**All VF-19 Kai Fire Valkyrie SB Songs gain (MAP) and (ALL) combination attack variants when Sound Booster activates.
**All VF-11 MAXL Kai SB Songs gain (MAP) and (ALL) combination attack variants when Sound Booster activates.
*Ideon (Cosmo, Kasha, Moera)
** Ideon gains the "Ideon Sword" and "Ideon Sword (MAP)" attacks when IDE gauge is full, and HP is below 30%
*Soloship (Bess, Hatari)

|-
| class="fc-route2" |'''第３３話：暁への脱出 Scenario 33 - Escape to Daybreak'''
| class="fc-route4" |'''第３３話：受け継ぎし遺産 Scenario 33 - The Successor's Inheritance'''

|-
|'''Victory Condition:''' (1)(2) Defeat all enemies besides the Albion '''Defeat Condition:''' (1) Ally battleship is defeated, Kira, Shinobu, or Alan are defeated, Albion is defeated; (2) Kira, Shinobu, Alan, Mwu, or Cagalli are defeated '''Skill Point:''' In 8 turns, destroy all enemies except the Albion '''Secret Requirements:''' '''Unit Acquisition:'''
*Strike Gundam (Mwu)
*Strike Rouge (Cagailli)
*M1 Astray (Juri)
*M1 Astray (Mayura)
*M1 Astray (Asagi)
*Justice Gundam (Athrun)
*Buster Gundam (Dearka)
*Mazinger Z gains the "Giant Swing Rocket Punch" attack
*Great Mazinger gains the "Great Booster" attack
*Koutetsu Jeeg stats are enhanced and can transform into Jeeg Panzeroid
*Dancouga and Black Wing can combine into Final Dancouga.

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated, Akira or Jinguji are defeated '''Skill Point:''' In 8 turns, destroy Etzira, Valgo, Glavil, Gabro Zan, and Gije '''Secret Requirements:''' '''Unit Acquisition:'''
*VF-1A S Valkyrie (Kakizaki)
*Raideen gains the Mutron Open mech ability
*Ideon (Cosmo, Kasha, Moera)
*Soloship (Bess, Hatari)
*Battle 7 (Max, Exedore, Miho, Sally)
*VF-1S S Valkyrie (Fokker)
*VF-1S S Valkyrie (Hikaru)
*VF-1A S Valkyrie (Kakizaki)
*YF-19 (Isamu)
*YF-21 (Guld)
*VF-19 Kai Fire Valkyrie (Basara)
*VF-11 MAXL Kai (Mylene)
*VF-17 Kai Nightmare (Ray, Veffidas)
*VF-17S Nightmare (Gamlin)
*VF-17D Nightmare (Physica)
*VF-17D Nightmare (Docker)

|}
 

==Stages 34 - 44==
{| width="100%"
|- class="fc-route-h"
| width="25%" |'''Touma Route'''
| width="25%" |'''Kusuha Route'''
| width="25%" |'''Cobray Route'''
| width="25%" |'''Selena Route'''

|-
| class="fc-route1" |'''第３４話：武人の心、その意味 Scenario 34 - Why a Warrior Fights'''
| class="fc-route2" |'''第３４話：怒りの強念者 Scenario 34 - The Wrath of a Esper'''
| class="fc-route3" |'''第３４話：虚ろな魂の捕囚 Scenario 34 - Captivity of the Hollow Soul'''
| class="fc-route4" |'''第３４話：ベトレイヤー Scenario 34 - Betrayer'''

|-
|'''Victory Condition:'''
*1st Part: (1)(2) Defeat all enemies
*2nd Part: Bemidoban is defeated 
'''Defeat Condition:'''
*1st Part: (1) Ally battleship is defeated; (2) Ally battleship is defeated, Touma is defeated
*2nd Part: Touma is defeated
'''Skill Point:''' Defeat all enemies within 6 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Raioh (Touma)
*Mazinger Z, Great Mazinger and Getter Dragon gain the "F Dynamic Special" combination attack

|'''Victory Condition:'''(1)(2) Shin RyuOhKi is defeated; (3)(4) Bemidoban and Shmuel are defeated '''Defeat Condition:''' (1) Any ally is defeated; (2) Kusuha is defeated; (3) Kusuha is defeated, Ally battleship is defeated; (4) Ally battleship is defeated '''Skill Point:''' Destroy the Bemidoban (retreats (8000 (E) / 10000 (N) / 12000 (H)) HP) '''Secret Requirements:''' '''Unit Acquisition:'''
*Mazinger Z, Great Mazinger and Getter Dragon gain the "F Dynamic Special" combination attack
*Dygenguar (Sanger)
*Aussenseiter (Ratsel)

|'''Victory Condition:''' Shin RyuOhKi is defeated '''Defeat Condition:''' Ally battleship is defeated, Cobray, Arad, or Seolla are defeated '''Skill Point:''' Defeat Shin RyuOuKi within 6 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Werkbau (Cobray)
*Mazinger Z, Great Mazinger and Getter Dragon gain the "F Dynamic Special" combination attack

|'''Victory Condition:''' (1) Shmuel is defeated; (2)(3) Bemidoban defeated Shin RyuOhKi '''Defeat Condition:''' (1) Selena is defeated; (2) Ally battleship is defeated, Selena is defeated; (3) Ally battleship is defeated '''Skill Point:''' Bemidoban and Shin RyuOuKi shot down. Both flee when below (8000 (E) / 10000 (N) / 12000 (H)) HP. '''Secret Requirements:''' '''Unit Acquisition:'''
*Mazinger Z, Great Mazinger and Getter Dragon gain the "F Dynamic Special" combination attack
*Alterion (CF) (Ibis, Tsugumi)
*AS Soleares (Selena, Elma) is unavailable during the intermission

|-
| class="fc-route1" |'''第３５話：闘志、誰がために Scenario 35 - For Whom the Fighting Spirit Burns'''
| class="fc-route2" |'''第３５話：魂、久遠に Scenario 35 - The Soul, Into Eternity'''
| class="fc-route3" |'''第３５話：THE GUN OF DIS Scenario 35 - THE GUN OF DIS'''
| class="fc-route4" |'''第３５話：クロージング・ハート Scenario 35 - Closing Heart'''

|-
|'''Victory Condition:''' (1)(2) Defeat all enemies '''Defeat Condition:''' (1) Touma is defeated; (2) Ally battleship is defeated, Touma, Sanger, or Rastel are defeated '''Skill Point:''' Defeat all enemies within 4 turns of allied reinforcements arriving. '''Secret Requirements:''' '''Unit Acquisition:'''
*DaiRaioh(Touma)
*Dygenguar (Sanger)
*Aussenseiter (Ratsel)

|'''Victory Condition:''' (1)(2)(3) Shin RyuOhKi is defeated '''Defeat Condition:''' (1) Kusuha or Bullet are defeated; (2) Kusuha is defeated; (3) Ally battleship is defeated, Kusuha is defeated '''Skill Point:''' Destroy Shin RyuOhKi within 6 turns of Varuch Ben and Ishar's arrival, destroying them first. '''Secret Requirements:''' '''Unit Acquisition:'''
*GouRyu Kai (Kusuha)
*Raiko Kai (Bullet)
*Shin RyuKoOh (Kusuha, Bullet)
*Dygenguar (Sanger)
*Aussenseiter (Ratsel)

|'''Victory Condition:''' (1)(2) Bemidoban or Shmuel are defeated; (3) ??? is defeated; (4) Valk Baal is defeated '''Defeat Condition:''' (1) Cobray is defeated, (2)(3)(4) Ally battleship is defeated, Cobray is defeated '''Skill Point:''' Defeat the Bemidoban within 5 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Varuch Ben (Cobray)
*Dis Astranagant (Cobray)

|'''Victory Condition:''' (1)(2) Defeat all enemies '''Defeat Condition:''' (1) Selena is defeated; (2) Ally battleship is defeated '''Skill Point:''' Map cleared within 7 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Eslim (Selena)
*Alterion (CF) replaces Tsugumi with Slay as a Subpilot

|-
| colspan="4" class="fc-std-sc" |'''第３６話：激突！勇者VS勇者！ Scenario 36 - Clash! Brave vs. Brave!'''

|-
| colspan="4" |'''Victory Condition:'''
*1st Part: Defeat all enemies
*2nd Part: Ally battleship is defeated
'''Defeat Condition:'''
*1st Part: Star GaoGaiGar is defeated
*2nd Part: Gai is defeated
'''Skill Point:''' Defeat all enemies within 6 turns. '''Secret Requirements:'''
*EVA-01 F-Type Equipment
**Shinji must defeat Ramiel on the first part of this scenario.
*Early Nu Gundam HWS
**Amuro must have 60 or more kills by the end of the scenario.
*GP-02A
**Burning, Monsha, Bate, and Adel must have a combined killcount of 100 or more by the end of the scenario.
*Nuclear Bazooka
**Meet the requirements for GP-02A
*Black Getter
**Michiru must have 20 kills or more by the end of the scenario.
'''Unit Acquisition:'''
*Gundam GP02
*Megarider
*Re-GZ BWS
*MP Nu Gundam
*Black Getter
*VF-1S S Valkyrie (Fokker)
*VF-1S S Valkyrie (Hikaru)
*VF-1A S Valkyrie (Kakizaki)
*VF-1J S Valkyrie
*YF-19 (Isamu)
*YF-21 (Guld)
*Battle 7 (Max)
*VF-19 Kai Fire Valkyrie (Basara)
*VF-11 MAXL Kai (Mylene)
*VF-17 Kai Nightmare (Ray)
*VF-17S Nightmare (Gamlin)
*VF-17D Nightmare (Physica)
*VF-17D Nightmare (Docker
*Soloship (Bess, Hatari)
*Ideon (Cosmo, Kasha, Moera)

|-
| colspan="4" class="fc-std-sc" |'''第３７話：果て無き旅路の始まり Scenario 37 - The Beginning of an Unending Journey'''

|-
| colspan="4" |'''Victory Condition:''' (1) Defeat all enemies; (2)(3) Devariim is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated; (3) Ally battleship is defeated, Bundle, Cutnall, or Kernagul are defeated
'''Skill Point:''' All enemies destroyed within 6 turns, with Devariim being last. '''Secret Requirements:''' '''Unit Acquisition:'''
*Heavy Weapons System parts for Nu Gundam
*Evangelion Unit 0 Custom gains the "N2 Mine" MAP attack
*Evangelion Unit 1 gains the "Magoroku E Sword" attack
*Gunbuster (Noriko)
*Sizzler Black (Jung)
*Eltrium (Tashiro, Deputy Chief)
*Bundle Ship (Bundle)
*Cutnall Ship (Cutnall)
*Kernagul Ship (Kernagul)

|- class="fc-route-h"
| colspan="2" |'''Go with the Soloship''' Gundam (0083, Zeta, ZZ, CCA, Wing, SEED) Getter Robo Raideen Daitarn 3 Evangelion Ideon GaoGaiGar
| colspan="2" |'''Go with the Battle 7''' Mazinger (Z, Great) Macross (DYRL, 7, Plus) Steel Jeeg Combattler V Voltes V Gunbuster Daimos Gaiking Goshogun Dancouga Virtual On

|-
| colspan="2" class="fc-route1" |'''第３８話：運命の炎の中で Scenario 38 - Within the Fires of Destiny'''
| colspan="2" class="fc-route3" |'''第３８話：戦火は星の瞬きと Scenario 38 - The Fires of War Among the Twinkling Stars'''

|-
| colspan="2" |'''Victory Condition:'''
*1st Part: Enemy Battleship is defeated
*2nd Part: (1) Defeat all enemies; (2) Dalam's Ship is defeated
'''Defeat Condition:'''
*1st Part: Ally battleship is defeated, Ideon is defeated
*2nd Part: (1) Ally battleship is defeated; (2) Ally battleship is defeated, Cosmo is defeated
'''Skill Point:''' Clear the map within 7 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Ideon loses Moera as a subpilot
*Ideon gains the "Ideon Gun" attack

| colspan="2" |'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Defeat all enemies within 6 turns. '''Secret Requirements:''' '''Unit Acquisition:'''

|-
| colspan="2" class="fc-route1" |'''第３９話：果てに待つもの Scenario 39 - What Awaits at the End'''
| colspan="2" class="fc-route3" |'''第３９話：ただ母星のために Scenario 39 - All for the Motherworld'''

|-
| colspan="2" |'''Victory Condition:''' (1)(2)Gabro Zan is defeated '''Defeat Condition:''' (1) Ally battleship is defeated, Ryouma, Hayato, Benkei, or Michiru are defeated; (2) Ally battleship is defeated, Ryouma, Hayato, Benkei, or Cosmo are defeated '''Skill Point:''' Destroy all Buff Clan ships within 8 turns, saving Gabro Zan for last. '''Secret Requirements:''' '''Unit Acquisition:'''
* Ideon gains Gije as a subpilot
* Shin Getter-1 gains the "Shin Shine Spark" attack

| colspan="2" |'''Victory Condition:''' Heinel is defeated '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Within 7 turns, defeat all enemies, then defeat Heinel and Richter (Richter must be defeated before Heinel) '''Secret Requirements:''' '''Unit Acquisition:'''

*Goshogun gains the "GoFlasher Special" attack

|-
| colspan="2" class="fc-route1" |'''第４０話：勇者王、最後の刻！ Scenario 40 - The King of Brave’s Final Hour!'''
| colspan="2" class="fc-route3" |'''第４０話：勇気、果つる時… Scenario 40 - When Courage Fails...'''

|-
| colspan="2" |'''Victory Condition:'''
*1st Part: Defeat all enemies
*2nd Part: Ally battleship is defeated
'''Defeat Condition:'''
*1st Part: Defeat all enemies
*2nd Part: Gai is defeated
'''Skill Point:''' Defeat all enemies within 6 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*All GaoGaiGar units are lost

| colspan="2" |'''Victory Condition:''' (1)(2)(3) Defeat all enemies '''Defeat Condition:''' (1) Gai is defeated; (2) Ally battleship is defeated, Gai is defeated; (3) Ally battleship is defeated '''Skill Point:''' Defeat all enemies within 7 turns, with Palparepa Plus being the last one. '''Secret Requirements:''' '''Unit Acquisition:'''
*GaoFighGar (Gai)
*All GaoGaiGar units are lost

|-
| colspan="4" class="fc-std-sc" |'''第４１話：銀河が消滅する日 Scenario 41 - The Day the Galaxy is Extinguished'''

|-
| colspan="4" |'''Victory Condition:''' (1) Defeat all enemies; (2) GaoFighGar is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated, J is defeated '''Skill Point:''' GaoFighGar shot down by turn 7. '''Secret Requirements:'''
*Gije & Ganga Rube
**When given the option, choose to meet the opponent's challenge (first option).
'''Unit Acquisition:'''
*J-Ark (J, Tomoro)
|-
| colspan="4" class="fc-std-sc" |'''第４２話：超勇者黙示録 Scenario 42 - The Super Brave Apocalypse'''

|-
| colspan="4" |'''Victory Condition:'''
*1st Part: Defeat all enemies
*2nd Part: Genesis GaoGaiGar reaches the designated point in 4 turns
'''Defeat Condition:'''
*1st Part: Gai or J are defeated
*2nd Part: Ally battleship is defeated, Gai is defeated, 5th turn is reached
'''Skill Point:''' All enemies shot down by turn 7. '''Secret Requirements:'''
* J-Phoenix & Renais (Sub Pilot)
**Have J defeat Pia Decem on the first part of the stage. Defeat Pia Decem again to gain the attack.
'''Unit Acquisition:'''
* King J-der gains the "J-Phoenix" attack, and gains Renais as a sub-pilot
**Koryuu and Anryuu lose the "Renais Support Attack" attacks
*Genesic GaoGaiGar (Gai)
*J-Ark (J, Tomoro)
** Renais also is a sub-pilot if the conditions are met in the first part of the stage
*Goldymarg (Goldymarg)
*Big Volfogg (Volfogg)
*TenRyuJin (TenRyuJin)
*KoRyu (KoRyu)
*AnRyu (AnRyu)
*EnRyu (EnRyu)
*HyoRyu (HyoRyu)
*Mic Sounder XIII (Mic Sounder XIII)

|- class="fc-route-h"
|'''Touma Route'''
|'''Kusuha Route'''
|'''Cobray Route'''
|'''Selena Route'''

|-
| class="fc-route1" |'''第４３話：閉ざされた世界で Scenario 43 - In a Closed-Off World'''
| class="fc-route2" |'''第４３話：真の龍神 Scenario 43 - The True Dragon God'''
| class="fc-route3" |'''第４３話：人形たちの宴 Scenario 43 - The Doll’s Banquet'''
| class="fc-route4" |'''第４３話：サイレント・クライ Scenario 43 - Silent Cry'''

|-
|'''Victory Condition:'''
*1st Part: (1) Defeat all enemies; (2) Vaikran is defeated, Houle is defeated
*2nd Part: Baran is defeated
'''Defeat Condition:'''
*1st Part: (1) Ally battleship is defeated, Touma or Ryusei are defeated; (2) Ally battleship is defeated, Ryusei is defeated
*2nd Part: Touma is defeated
'''Skill Point:''' Defeat the Bemidoban within 5 turns. '''Secret Requirements:''' '''Unit Acquisition:'''

|'''Victory Condition:''' (1) Defeat Shin RyuOhKi; (2) Vaikran is defeated, Houle is defeated '''Defeat Condition:''' (1) Kusuha or Ryusei are defeated; (2) Ally battleship is defeated, Ryusei is defeated '''Skill Point:''' Defeat Shin RyuOhKi within 5 turns. '''Secret Requirements:''' '''Unit Acquisition:'''

|'''Victory Condition:'''
*1st Part: (1) Defeat all enemies; (2) Vaikran is defeated, Houle is defeated
*2nd Part: Valk Baal is defeated
'''Defeat Condition:'''
*1st Part: (1)(2) Ally battleship is defeated, Ryusei is defeated
*2nd Part: Cobray is defeated
'''Skill Point:''' Defeat the Bemidoban within 5 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Dis Astranagant (Cobray) is unavailable during the intermission

|'''Victory Condition:''' (1) Defeat all enemies; (2)(3) Vaikran is defeated, Houle is defeated'''Defeat Condition:''' (1)(2) Ally battleship is defeated, Selena, Ibis, or Ryusei are defeated (3) Ryusei is defeated'''Skill Point:''' Defeat the Bemidoban within 5 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*AS Alegrias (Selena, Elma?) Is unavailable until the next stage

|-
| class="fc-route1" |'''第４４話：闘志、未来のために Scenario 44 - Fighting Spirit, for the Future'''
| class="fc-route2" |'''第４４話：四神招魂、ここに Scenario 44 - The Four Gods Souls, Gather Here'''
| class="fc-route3" |'''第４４話：鋼の戦神 Scenario 44 - The Steel War God'''
| class="fc-route4" |'''第４４話：マイホーム・マイフレンズ Scenario 44 - My Home, My Friends'''

|-
|'''Victory Condition:'''
*1st Part: Vaikran is defeated
*2nd Part: (1)(2) Vaikran is defeated
'''Defeat Condition:'''
*1st Part: Ally battleship is defeated, Ryusei is defeated
*2nd Part: (1) Touma or Lyria are defeated; (2) Touma, Baran, or Lyria are defeated
'''Skill Point:''' Destroy the Vaikran within 5 turns. '''Secret Requirements:'''
*VF-19F Excaliburs
**Max must have a total of 60 or more kills by the end of the scenario, if you do not pick the Go to Varauta route.
*Gije & Ganga Rube
**You must pick the Go To Bozoan Route.
'''Unit Acquisition:'''
* DaiRaioh gains the "Jinrai" attack 
*Banpreios (Ryuusei, Rai, Mai)
*Dygenguar (Sanger)
*Aussenseiter (Ratsel)
*Shumel (Lyria)
*Bemidoban (Baran)

|'''Victory Condition:'''
*1st Part: Vaikran is defeated
*2nd Part: (1)(2) Vaikran is defeated
'''Defeat Condition:'''
*1st Part: Kusuha or Ryusei are defeated
*2nd Part: (1) Ally battleship is defeated, Kusuha is defeated; (2) Kusuha, Bullet, or Lyria are defeated
'''Skill Point:''' Destroy the Vaikran within 5 turns. '''Secret Requirements:'''
*VF-19F Excaliburs
**Max must have a total of 60 or more kills by the end of the scenario, if you do not pick the Go to Varauta route.
*Gije & Ganga Rube
**You must pick the Go To Bozoan Route.
'''Unit Acquisition:'''
*Banpreios (Ryuusei, Rai, Mai)
*Dygenguar (Sanger)
*Aussenseiter (Ratsel)
*Shumel (Lyria)
*Shin RyuKoOh can now transform into Shin KoRyuOh

|'''Victory Condition:'''
*1st Part: (1) Defeat all enemies; (2) Vaikran is defeated
*2nd Part: Defeat all enemies
'''Defeat Condition:'''
*1st Part: (1)(2) Ally battleship is defeated, Ryusei, Arad or Seola are defeated
*2nd Part: Ally battleship is defeated, Cobray or Lyria are defeated
'''Skill Point:''' Destroy the Vaikran within 3 turns of its arrival. '''Secret Requirements:'''
*VF-19F Excaliburs
**Max must have a total of 60 or more kills by the end of the scenario, if you do not pick the Go to Varauta route.
*Gije & Ganga Rube
**You must pick the Go To Bozoan Route.
'''Unit Acquisition:'''
*Dis Astranagant (Cobray)
*Banpreios (Ryuusei, Rai, Mai)
*Dygenguar (Sanger)
*Aussenseiter (Ratsel)
*Shumel (Lyria)

|'''Victory Condition:'''
*1st Part: (1) Valk Isher is defeated; (2) Vaikran is defeated
*2nd Part: (1)(2) Vaikran is defeated
'''Defeat Condition:'''
*1st Part: (1)(2) Ally battleship is defeated, Ryusei or Ibis are defeated
*2nd Part: (1) Ally battleship is defeated, Selena, Ibis, or Lyria are defeated; (2) Selena or Lyria are defeated
'''Skill Point:''' Destroy the Vaikran within 3 turns of its arrival. '''Secret Requirements:'''
*VF-19F Excaliburs
**Max must have a total of 60 or more kills by the end of the scenario, if you do not pick the Go to Varauta route.
*Gije & Ganga Rube
**You must pick the Go To Bozoan Route.
'''Unit Acquisition:'''
*Banpreios (Ryuusei, Rai, Mai)
*Dygenguar (Sanger)
*Aussenseiter (Ratsel)
*Shumel (Lyria)
*Alterion (CF) replaces Slay with Tsugumi as a subpilot
*Vegalion (Slay)
**Alterion (CF) and Vegalion can combine into Hyperion

|}
 

==Stages 45 - 48==
{| width="100%"
|- class="fc-route-h"
| colspan="2" |'''Go to Earth'''
| colspan="2" |'''Go to Space'''

|- class="fc-route-h"
| width="25%" |'''Search for Irui''' Mazinger (Z, Great) Getter Robo Kotetsu Jeeg Gaiking Dancouga
| width="25%" |'''Fight against ZAFT''' Gundam (0083, Z, ZZ, CCA) Gundam Wing Gundam SEED Evangelion
| width="25%" |'''Go to Varauta''' Macross (DYRL, 7, Plus) GoShogun Daitarn 3 Gunbuster
| width="25%" |'''Go to Boazan''' Ideon Combattler V Voltes V Daimos Raideen GaoGaiGar Virtual On

|-
| class="fc-route1" |'''第４５話：とらわれの心、叫ぶ時 Scenario 45 - When the Captive Heart Cries Out'''
| class="fc-route2" |'''第４５話：忍び寄る終焉 Scenario 45 - Creeping Death'''
| class="fc-route3" |'''第４５話：悪夢の突入作戦 Scenario 45 - Charging into a Nightmare'''
| class="fc-route4" |'''第４５話：もう一つの母星ボアザン Scenario 45 - Another Mother Planet - Boazan'''

|-
|'''Victory Condition:''' (1) Defeat all enemies: (2) Legion is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated '''Skill Point:''' Defeat all enemies within 7 turns '''Secret Requirements:'''
'''Unit Acquisition:'''

|'''Victory Condition:''' (1) Defeat all enemies; (2) All Angels are defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated, Shinji, Asuka, or Rei are defeated '''Skill Point:''' Defeat all enemies within 5 turns. '''Secret Requirements:'''
*Early Nu Gundam HWS
**If you did not receive it on Scenario 37, Amuro must have 60 or more kills by the end of the scenario.
*EVA-01 F-Type Equipment(optional)
**Shinji must defeat Armisael.
*Neue Ziel
**Kou must have 40 or more kills than Keith by the end of the scenario.
*Val Varo
**Keith must have 20 or more kills than Kou by the end of the scenario.
*Gerbera Tetra
**Kou and Keith's killcounts must be within 6 of one another by the end of the scenario.
*Quin Mantha
**The sum of Ple and Ple 2's killcounts must be a number ending in 5 at the end of the scenario.
*Haman's Qubeley
**The sum of Ple and Ple 2's killcounts must be a number ending in 0 at the end of the scenario.
*MP Qubeleys
**The sum of Ple and Ple 2's killcounts must be a number ending in 7 at the end of the scenario.
*Doven Wolf
**The sum of Beecha and Mondo's killcounts must be a number ending in 0 at the end of the scenario.
*Geymalk
**The sum of Beecha and Mondo's killcounts must be a number ending in 5 at the end of the scenario.
*Strike Rouge IWSP
**The sum of Cagalli, Julie, Mayura, and Asagi's killcounts must be 100 or more by the end of the scenario.
*Early Full Armor ZZ Gundam
**Judau, Mondo, Beecha, Elle, Roux, and Iino's combined killcounts must be greater than 115 by the end of this scenario.
'''Unit Acquisition:'''
*Neue Ziel OR Val Varo OR Gerbera Tetra
*Quin Mantha OR Haman's Qubeley OR Mass Production Qubeley (x2)
*Doven Wolf OR Geymalk
*Strike Rougue IWSP
*Heavy Weapon System for Nu Gundam
*Full Armor Parts for ZZ Gundam
*Evangelion Unit 2 gains the "A.T. Field" attack
*Evangelion Unit 0 Custom gains the "Lance of Longinus" attack

|'''Victory Condition:'''
*1st Part: All allies reach the designated point, aside Battle 7
*2nd Part: Any ally reaches the designated point
'''Defeat Condition:'''
*1st Part: Any ally is defeated
*2nd Part: Any ally is defeated
'''Skill Point:''' Defeat all enemies before moving a unit to the target area. '''Secret Requirements:'''
'''Unit Acquisition:'''
*The following all gain the "Large Anti-Ship Reaction Missile" attack
**VF-1S S Valkyrie (Focker), VF-1S S Valkyrie (Hikaru), VF-1A S Valkyrie (Kakizaki)
**VF-17S Nightmare (Gamlin), VF-17D Nightmare (Docker), VF-17D Nightmare (Physica)
**YF-19 (Isamu), YF-21 (Guld)

|'''Victory Condition:''' Zartan is defeated '''Defeat Condition:''' Any ally is defeated '''Skill Point:''' Destroy all other enemies before destroying Zaltan. '''Secret Requirements:'''
'''Unit Acquisition:'''

|-
| class="fc-route1" |'''第４６話：さらば父よ、戦士達の旅立ち Scenario 46 - Farewell, Father! The Warriors Depart'''
| class="fc-route2" |'''第４６話：永遠を信じて Scenario 46 - Believe in Eternity'''
| class="fc-route3" |'''第４６話：野望の第４惑星 Scenario 46 - The Fourth Planet of Ambition'''
| class="fc-route4" |'''第４６話：崩れゆく邪悪の塔 Scenario 46 - The Collapsing Tower of Evil'''

|-
|'''Victory Condition:''' (1) Steel Jeeg persuades Flora; (2) Defeat Yamata no Orochi, Demonica, and the Dragon Ship; (3) '''Defeat Condition:''' (1) Flora is defeated, Ally battleship is defeated, Kouji, Tetsuya, or Steel Jeeg are defeated; (2) Yamata no Orochi reaches the designated point, Ally battleship is defeated, Kouji, Tetsuya or Steel Jeeg are defeated '''Skill Point:''' Destroy Ryuuma and the Grand Marshall of Hell within 8 turns. '''Secret Requirements:'''
*Minmei's Disc
**Move Boss's squad onto either 'Hut' tile on the beach, and you will pick up the item
'''Unit Acquisition:'''
*Mazinkaizer gains the "Kaizer Nova" attack and Flight (S Rank in Air)

|'''Victory Condition:''' (1)(2) Defeat all enemies; (3) The Dominion withdraws '''Defeat Condition:''' (1) Any ally is defeated; (2)(3) Ally battleship is defeated, Kira or Athrun are defeated '''Skill Point:''' Destroy the Dominion (retreats at (10000HP (E) / 15000HP (N)/20000HP (H)) '''Secret Requirements:''' '''Unit Acquisition:'''
*Eternal (Lacus, Andrew)
*BuCUE
*METEOR parts for Freedom Gundam
*METEOR parts for Justice Gundam
*LaGOWE

|'''Victory Condition:''' (1) Guide all enemies east past the designated line; (2) All allies reach the escape point '''Defeat Condition:''' (1) Any ally is defeated, Any enemy is defeated; (2) Any ally is defeated '''Skill Point:''' Clear the map by defeating all enemies within 8 turns of the victory condition change '''Secret Requirements:'''
*VF-19F Excaliburs
**Max must get 15 or more kills on this scenario.
'''Unit Acquisition:'''
*VF-22S Sturmvogel II (Max)
*FBz-99G Zaubergeran (Gamlin)
*VF-19 Kai Fire Valkyrie gains the song "TRY AGAIN"
**VF-19 Kai Fire Valkyrie, VF-11 MAXL Kai, and VF-17 Kai Nightmare gain the "TRY AGAIN" (MAP) and (ALL) combination attack

|'''Victory Condition:''' (1) None; (2) Warchimedes is defeated; (3) Janera is defeated '''Defeat Condition:''' (1) Any friendly unit is defeated, Voltes V or Daimos are defeated; (2)(3) Ally battleship is defeated, Hyouma, Ken'ichi, Kazuya, or Heinel are defeated '''Skill Point:''' Destroy all enemies and finish the stage within 10 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Combattler V, Voltes V, and Daimos gain the "Choudenji SeiKenZuki" combination attack

|-
| class="fc-route1" |'''第４７話：神になろうとした男 Scenario 47 - The Man Who Tried to Become a God'''
| class="fc-route2" |'''第４７話：ヒトの見た夢 Scenario 47 - The Dream People Saw'''
| class="fc-route3" |'''第４７話：大宇宙の意志 Scenario 47 - The Will of the Universe'''
| class="fc-route4" |'''第４７話：因果の海で Scenario 47 - In the Sea of Causality'''

|-
|'''Victory Condition:''' (1) Defeat all enemies; (2) Shapiro is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated '''Skill Point:''' Destroy Shapiro within 6 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Gaiking and Daiku Maryuu gain the "Giant Cutter Upside-down Slash" combination attack

|'''Victory Condition:''' (1)(2)(3) Defeat all enemies; '''Defeat Condition:''' (1) Ally battleship is defeated, Kira, Mwu, or Dearka are defeated; (2) Kira is defeated; (3) The Vesalius is defeated '''Skill Point:''' Orga, Clotho and Shani shot down before Fllay reaches the Dominion. '''Secret Requirements:''' '''Unit Acquisition:'''

|'''Victory Condition:''' (1)(2)(3) Defeat all enemies '''Defeat Condition:''' (1) Any ally is defeated; (2) Ally battleship is defeated, Bundle is defeated; (3) Ally battleship is defeated, Bundle, Gamlin, or Mylene are defeated '''Skill Point:''' Destroy all SMTC units within 5 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*VF-19S Excalibur (before deployment)
*VF-19F Excalibur (x2) (before deployment)
*Bundle's Ship (Bundle, Cutnal, Kernagul)

|'''Victory Condition:'''
*1st and 2nd Part: Defeat all enemies within (5 (E) / 4 (N) / 3 (H)) turns
*3rd and 4th Part: Defeat all enemies within (4 (E) / 3 (N) / 2 (H)) turns
*5th Part: Defeat all enemies within (8 (E) / 7 (N) / 6 (H)) turns
'''Defeat Condition:'''
*1st and 2nd Part: Ally battleship is defeated, Turn (6 (E) / 5 (N) / 4 (H)) is reached
*3rd and 4th Part: Ally battleship is defeated, Turn (5 (E) / 4 (N) / 3 (H)) is reached
*5th Part: Ally battleship is defeated, Turn (9 (E) / 8 (N) / 7 (H)) is reached
'''Skill Point:''' During the 5th Part: Shoot down the two Gataman Zans before the Gabro Zan '''Secret Requirements:''' '''Unit Acquisition:'''

|-
| colspan="2" class="fc-route1" |'''第４８話：失われた者たちへの鎮魂歌 Scenario 48 - Requiem for the Lost'''
| colspan="2" class="fc-route4" |'''第４８話：銀河に死す Scenario 48 - To Die in the Galaxy'''

|-
| colspan="2" |'''Victory Condition:''' (1) Deathgaia, Gildrome, and Helmut are defeated; (2) Mute Zalbados is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated '''Skill Point:''' Defeat all enemies within 6 turns after Muge Zalbados appears, then defeat Muge Zalbados '''Secret Requirements:'''
*Early Nu Gundam HWS
**If you did not receive it on Scenario 37 or 45, Amuro must have 60 or more kills by the end of the scenario.
'''Unit Acquisition:'''

| colspan="2" |'''Victory Condition:''' (1) Defeat all enemies; (2) Gollum or Zomd are defeated; (3) Defeat all enemies; (4) Gabro Zan is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated, Basara is defeated; (3)(4) Ally battleship is defeated, Ideon is defeated '''Skill Point:''' Destroy GaviGla (retreats at 8000HP (E) / 10000HP (N) / 12000HP (H)) '''Secret Requirements:'''
*Early Nu Gundam HWS
**If you did not receive it on Scenario 37 or 45, Amuro must have 60 or more kills by the end of the scenario.
*Gije & Ganga Rube
**The Ide Gauge must reach level 5 during this scenario.
'''Unit Acquisition:'''
*Ideon replaces Gije with Dek as a Subpilot
*Battle 7 gains the "Large Anti-Ship Reaction Missile" attack
*VF-19 Kai Fire Valkyrie (Basara) is unavailable during the intermission

|}
 

==Stages 49 - 58==
{| width="100%"
|-
| colspan="3" class="fc-std-sc" |'''第４９話：銀河に響く歌声 Scenario 49 - Songs Resounding Through the Galaxy'''

|-
| colspan="3" |'''Victory Condition:'''
*1st Part: Defeat all enemies, In 5 turns Battle 7 reaches the designated point
*2nd Part: (1) In 6 turns, Battle 7 reaches the designated point; (2)(3)(4) Gepelnitch is defeated
'''Defeat Condition:'''
*1st Part: Ally battleship is defeated, Battle 7 doesn't reach the designated point by turn 6
*2nd Part: (1) Ally battleship is defeated, Mylene or Ray are defeated, Battle 7 doesn't reach the designated point by turn 7; (2) Ally battleship is defeated, Ray is defeated; (3) Ally battleship is defeated, Basara, Mylene, or Ray are defeated; (4) Ally battleship is defeated, Basara, Mylene, Ray, or Sybil are defeated
'''Skill Point:''' GaviGla is defeated (in the 1st part) '''Secret Requirements:'''
*Gavil and FBz-99G Zaubergeran
**If Gamlin has over 50 kills, Gamlin must defeat GaviGla during the first half of the scenario. During the second half of the scenario, do not defeat Gavil.
'''Unit Acquisition:'''
*VF-22S Sturmvogel II (Max)
*VF-22S Sturmvogel II (Milia)
*Sybil (Sybil)
**VF-19 Kai Fire Valkyrie, VF-11 MAXL Kai, and VF-17 Kai Nightmare, and Sybil gain the "TRY AGAIN" combination attack
*FBz-99G Zaubergeran (Gavil)

|-
| colspan="3" class="fc-std-sc" |'''第５０話：二つの門と二つの星 Scenario 50 - Two Gates, Two Stars'''

|-
| colspan="3" |'''Victory Condition:''' (1) Hermodr Echad is defeated; (2) Zfield is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated '''Skill Point:''' Destroy the Hermodr Echad within 5 turns. '''Secret Requirements:'''
*Duel Gundam & Yzak
**Dearka's killcount must be 50 or more by the end of the scenario.
'''Unit Acquisition:'''

|-
| colspan="3" class="fc-std-sc" |'''第５１話：終わらない明日へ Scenario 51 - To an Unending Tomorrow'''

|-
| colspan="3" |'''Victory Condition:'''
*1st Part: (1) Destroy all nuclear missiles; (2) Dominion is defeated & Athrun reaches the designated point
*2nd Part: Destroy the Genesis reactor within 4 turns
'''Defeat Condition:'''
*1st Part: (1) Any missile reaches the end of the map, Ally battleship is defeated, Kira, Athrun or Cagalli are defeated; (2) Ally battleship is defeated, Kira, Athrun or Cagalli are defeated
*2nd Part: Kira is defeated, reach the 5th turn
'''Skill Point:''' Destroy the Providence Gundam (in the 2nd part) '''Secret Requirements:'''
*Duel Gundam & Yzak
**During the first half of the scenario, destroy all of the nukes, then have Dearka battle with Yzak
**Both must survive the first half of the scenario
'''Unit Acquisition:'''
*Lacus unlocks the SEED pilot skill
*Duel Gundam (Yzak)

|-
| colspan="3" class="fc-std-sc" |'''第５２話：世界の中心でアイを叫んだもの Scenario 52 - The One Who Cried "Love" at the Heart of the World'''

|-
| colspan="3" |'''Victory Condition:'''
*1st Part: (1)(2)(3) Defeat all enemies (4)(5) EVA Unit 1 is defeated
*2nd Part: EVA Unit 1 is defeated
'''Defeat Condition:'''
*1st Part: (1) Any ally is defeated; (2) Shinji is defeated; (3)(4) Ally battleship is defeated; (5) Ally battleship is defeated, Reach the 6th turn after the "Cross" grows from the Earth
*2nd Part: Shinji is defeated
'''Skill Point:''' Asuka survives for 2 full turns. '''Secret Requirements:'''
*Neue Ziel
**Kou must have 40 or more kills than Keith by the end of the scenario.
*Val Varo
**Keith must have 20 or more kills than Kou by the end of the scenario.
*Gerbera Tetra
**Kou and Keith's killcounts must be within 6 of one another by the end of the scenario.
*Quin Mantha
**The sum of Ple and Ple 2's killcounts must be a number ending in 5 at the end of the scenario.
*Haman's Qubeley
**The sum of Ple and Ple 2's killcounts must be a number ending in 0 at the end of the scenario.
*MP Qubeleys
**The sum of Ple and Ple 2's killcounts must be a number ending in 7 at the end of the scenario.
*Doven Wolf
**The sum of Beecha and Mondo's killcounts must be a number ending in 0 at the end of the scenario.
*Geymalk
**The sum of Beecha and Mondo's killcounts must be a number ending in 5 at the end of the scenario.
*EVA-01 F-Type Equipment
**Shinji must defeat Zeruel on the first part of this scenario.
**Shinji must defeat EVA-01 on the second part of this scenario.
**The sum of Shinji, Asuka, and Rei's killcounts must be 250 or more, or 150 or more if you met the requirement on scenario 45.
*Hi-Nu Gundam
**Amuro and Bright's combined killcounts must be greater than 120 by the end of this scenario.
*Sazabi
**Amuro and Kamille's killcount must be 50 or more each at the end of this scenario. You will receive it at the start of next scenario.
*Strike Rouge IWSP
**If you did not receive it on Scenario 45, the sum of Cagalli, Julie, Mayura, and Asagi's killcounts must be 100 or more by the end of the scenario.
*Destroid Monster
**If you did not receive it on Scenario 31, the sum of Fokker, Hikaru, and Kakizaki's killcounts must be 100 or more by the end of this scenario.
'''Unit Acquisition:'''
*Evangelion Unit 0 (Kaowru)
*Evangelion Unit 0 loses the "Lance of Longinus" attack

|-
| colspan="3" class="fc-prologue" |'''Beyond this point, losing Ideon results in a Game Over'''
|-
| colspan="3" class="fc-std-sc" |'''第５３話：出航！銀河殴り込み艦隊！ Scenario 53 - The Galactic Assault Fleet Takes Sail!'''

|-
| colspan="3" |'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' 230 enemy units shot down by turn 7. '''Secret Requirements:''' '''Unit Acquisition:'''
*All secret units and parts are given after the stage begins <ul><li>Neue Ziel OR Val Varo OR Gerbera Tetra</li><li>Quin Mantha OR Haman's Qubeley OR Mass Production Qubeley (x2)</li><li>Doven Wolf OR Geymalk</li><li>Strike Rougue IWSP</li><li>Hi-Nu Gundam</li><li>Sazabi</li><li>Destroid Monster</li><li>F-Type Equipment for Evangelion Unit 1</li><li>Atomic Bazooka parts for GP-02</li><li>Heavy Weapon System for Nu Gundam</li><li>Full Armor Parts for ZZ Gundam</li></ul>
*MP Nu Gundam
**Fin Funnel parts for MP Nu Gundam
*Gunbuster adds Kazumi as a Subpilot
**Gunbuster gains the "Super Inazuma Kick" attack
*Ra Cailum gains the "Nuclear Missile" MAP and ALL attacks

|-
| colspan="3" class="fc-std-sc" |'''第５４話：神に守られし星 Scenario 54 - The Planet Guarded by the Gods'''

|-
| colspan="3" |'''Victory Condition:'''
*1st Part: (1) Defeat all enemies; (2) The SRX Team rescues [https://akurasu.net/wiki/Super_Robot_Wars/Alpha_3/Info_Dump#Finding_Aya_on_Scenario_54 Aya]; (3) Jumora is defeated
*2nd Part: Bemidoban is defeated
'''Defeat Condition:'''
*1st Part: (1)(2) Ally battleship is defeated, Ryusei or Viletta are defeated; (3) Ally battleship is defeated, Ryusei, Viletta, Baran, or Lyria are defeated
*2nd Part: Sanger is defeated
**2nd Part (Touma Route): Touma is defeated
'''Skill Point:''' Clear the map within 10 turns, with both Hermoz defeated '''Secret Requirements:''' '''Unit Acquisition:'''
*Banpreios adds Aya as a Subpilot
**Branpreios gains the "Tenjou Tenge Nendou Musou-ken" attack
**Branpreios and R-GUN Powered gain the "Tenjou Tenge Ichigeki Hissatsu-ho" combination attack
*Shumel (Lyria)
*Bemidoban (Baran)

|-
| colspan="3" class="fc-std-sc" |'''第５５話：まつろわぬ神 Scenario 55 - The God Who Resists Order'''

|-
| colspan="3" |'''Victory Condition:'''
*1st Part: (1) Defeat all enemies; (2) Defeat Gebel GanEden
*2nd Part: (1) Defeat all enemies; (2) Defeat Gebel GanEden
'''Defeat Condition:'''
*1st Part: (1)(2) Ally battleship is defeated
*2nd Part: (1)(2) Ally battleship is defeated
'''Skill Point:''' Within 6 turns, defeat both Zfiruds '''Secret Requirements:''' '''Unit Acquisition:'''

|-
| colspan="3" class="fc-std-sc" |'''第５６話：終わりなき総力戦 Scenario 56 - Unending Total War'''

|-
| colspan="3" |'''Victory Condition:'''
*1st Part: Drowa Zan is defeated within 5 turns
*2nd Part: (1) Soloship move next to the Bairal Jinn; (2) Any unit reaches the designated point
'''Defeat Condition:'''
*1st Part: Ally battleship is defeated, 6th turn is reached
*2nd Part: (1)(2) Ally battleship is defeated
'''Skill Point:''' Clear the map within 7 turns. '''Secret Requirements:'''
*Gije & Ganga Rube
**You must pick the Fight The Buff Clan option at the end of the scenario.
*Bad Ending Route
**On New Game+, choose to fight (first option)
'''Unit Acquisition:'''

|- class="fc-route-h"
| width="40%" |'''Fight The Buff Clan''' Ideon, Getter Robo Combattler V, Voltes V, Daimos Daitarn 3 Gundam (0083, Zeta, ZZ, CCA, Wing, SEED)
| width="40%" |'''Fight The STMC''' Mazinger (Z, Great), Steel Jeeg, Raiden Goshogun, Dancouga, Gaiking Macross (DYRL, Plus, 7) Gunbuster, Evangelion, GaoGaiGar Virtual On
| width="20%" |'''Bad Ending '''

|-
| class="fc-route1" |'''第５７話：憎しみの環の中で Scenario 57 - In a Circle of Hatred'''
| class="fc-route3" |'''第５７話：終わりの始まり Scenario 57 - The Beginning of the End'''
| class="fc-prologue" |'''イデ発動ルート最終話：銀河に君と''' '''Ide Activation Final Scenario - With You In The Galaxy'''

|-
|'''Victory Condition:'''
*1st Part: (1) Defeat all enemies; (2) Soloship reaches the designated point
*2nd Part: Defeat all enemies within (11 (E) / 9 (N) / 7 (H)) turns
'''Defeat Condition:'''
*1st Part: (1)(2) All allies are defeated
*2nd Part: Turn (12 (E) / 10 (N) / 8 (H)) is reached, Ally battleship is defeated
'''Skill Point:''' Defeat all enemies within (10 (E) / 8 (N) / 6 (H)) turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Ganga Rube (Gije)

|'''Victory Condition:''' (1)(2) Defeat all enemies '''Defeat Condition:''' (1) Eltrium is defeated; (2) Ally battleship is defeated '''Skill Point:''' Defeat all enemies within 7 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Eltrium (Tashiro, Deputy Chief)

| rowspan="4" |'''Victory Condition:''' Bairal Jinn is defeated '''Defeat Condition:''' Ally battleship is defeated '''Secret Requirements:''' '''Unit Acquisition:'''

|-
| class="fc-route1" |'''第５８話：発動 Scenario 58 - Activation'''
| class="fc-route3" |'''第５８話：死闘、未来を懸けて Scenario 58 - The Mortal Struggle for the Future'''

|-
|'''Victory Condition:'''
*1st Part: Bairal Jinn is defeated
*2nd Part: Bairal Jinn is defeated
'''Defeat Condition:'''
*1st Part: Ally battleship is defeated
*2nd Part: Ally battleship is defeated
'''Skill Point:''' Destroy the Bairal Jinn within six turns. '''Secret Requirements:''' '''Unit Acquisition:'''

|'''Victory Condition:''' (1)(2) Defeat all enemies '''Defeat Condition:''' (1) Ally battleship is defeated; Drowa Zan is defeated, Ally battleship is defeated(2) '''Skill Point:''' All Buff Clan units survive the stage. '''Secret Requirements:''' '''Unit Acquisition:'''

|}
 

==Stages 59 - END==
{| width="100%"
|-
| colspan="2" class="fc-std-sc" |'''第５９話：果てしなき流れの果てに Scenario 59 - At the End of the Unending Flow'''

|-
| colspan="2" |'''Victory Condition:'''
*1st Part: Reach the 11th turn
*2nd Part: Defeat all enemies, 6th turn is reached
'''Defeat Condition:'''
*1st Part: Ally battleship is defeated, Any enemy enters the designated area
*2nd Part: Any enemy enters the designated area, Ally battleship is defeated, Noriko or Jung are defeated
'''Skill Point:''' Defeat all enemies within 5 turns. '''Secret Requirements:''' '''Unit Acquisition:'''

|- class="fc-route-h"
| width="50%" |'''Normal Ending - 56 Skill Points or less, OR turn count 421 or more'''
| width="50%" |'''Good Ending - 57 Skill Points or more AND turn count 420 or less'''

|-
| class="fc-route1" |'''最終話: 終焉の銀河 Final Scenario - A Galaxy of Death'''
| class="fc-route3" |'''最終話: 今遥か遠い彼方… Final Scenario - Now, The Faraway Yonder'''

|-
|'''Victory Condition:''' (1) ??? is destroyed; (2) Kaiser Ephres is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated '''Secret Requirements:''' '''Unit Acquisition:'''

|'''Victory Condition:''' (1) ??? is destroyed; (2)(3) Kaiser Ephres is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated; (3) Irui is defeated '''Secret Requirements:''' '''Unit Acquisition:'''
*Nashim Gan Eden (Irui)

|}

Super Robot Wars/Alpha 3/Flow Chart

2023-06-10T15:53:02Z

KomodoWork: /* Stages 34 - 44 */ Touma's main mecha final attack

Units and Pilots in Black join your team. 
Units and Pilots in Orange are available for that stage, then leave. 
Units and Pilots in Blue have special requirements. Check the [[../Secrets|Secrets]] page for more details. 
Units and Pilots in Red previously joined, but from this point, are rendered unusable. Those lost permanently are marked so, while others rejoin later on. 
Information in Green are upgrades for units already in your party.

==Stages 01 - 18==
{| width="100%"
|- class="fc-route-h"
| width="25%" |'''Touma Route'''
| width="25%" |'''Kusuha Route'''
| width="25%" |'''Cobray Route'''
| width="25%" |'''Selena Route'''

|-
| class="fc-route1" |'''第１話：闘志、炎に燃ゆる Scenario 1 - Within the Flames, Fighting Spirit Rises'''
| class="fc-route2" |'''第１話：出撃！鋼の龍虎 Scenario 1 - Launch! Dragon and Tiger of Steel'''
| class="fc-route3" |'''第１話：虚空からの転生 Scenario 1 - Reincarnated from the Void'''
| class="fc-route4" |'''第１話：シークレット・ミッション Scenario 1 - Secret Mission'''

|-
|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Any allied unit is defeated '''Skill Point:''' Defeat all enemies in 3 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Raioh (Touma)
*GaoGaiGar (Guy)
*Goldymarg (Goldymarg)
*HyoRyu (HyoRyu)
*EnRyu (EnRyu)

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Any allied unit is defeated '''Skill Point:''' Defeat all enemies in 2 turns '''Secret Requirements:'''
*Bullet
**You must be playing as Kusuha to recruit Bullet.
'''Unit Acquisition:'''
*Gouryu Kai (Kusuha)
*Raikou Kai (Bullet)
*Mazinkaiser (Kouji)
*Diana A (Sayaka)
*Shin Getter (Ryoma, Hayato, Benkei)
*Lady Command (Michiru)

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' (1) Werkbau is defeated; (2) Werkbau is defeated, ally battleship is defeated '''Skill Point:''' Defeat all enemies in 5 turns after enemy reinforcements show up '''Secret Requirements:'''
*Arado and Seolla
**You must be playing as Cobray to recruit Arado and Seolla.
'''Unit Acquisition:'''
*Werkbau (Cobray)
*Nu Gundam (Amuro)
*Ra Cailum (Bright, Torres)
*MP Nu Gundam (Kayra)
*Jegan (Katz)
*Incom & Funnel parts for MP Nu Gundam

|'''Victory Condition:''' (1) All enemies except Salamis Kai shot down; (2) R-Gun Powered shot down '''Defeat Condition:''' (1) Selena shot down, Salamis Kai shot down; (2) Selena shot down '''Skill Point:''' Defeat all enemies except the Salamis Kai in 4 turns '''Secret Requirements:'''
*Ibis and Slay
**You must be playing as Selena to recruit Ibis and Slay.
'''Unit Acquisition:'''
*AS Soleares (Selena, Elma)
*Albion (Synapse, Paserov)
*GP03 Dendrobium (Kou)
*GM Cannon II (Keith)
*GM Custom (Burning)
*GM Custom (Bate)
*GM Custom (Monsha)
*GM Cannon II (Adel)
*Zeta Gundam (Kamille)
*Re-GZ BWS (Four)
*Methuss (Fa)
*Super Gundam (Emma)
*Armed Fortress Orchis parts for Gundam Stamen
*G Defensor parts for Gundam Mk-II

|-
| class="fc-route1" |'''第２話: さらばGGG、さらば勇者 Scenario 2 - Farewell, GGG! Farewell, Braves!'''
| class="fc-route2" |'''第２話: 新たなる侵略者！立ち上がれV Scenario 2 - New Invaders! Rise Up, V!'''
| class="fc-route3" |'''第２話: 血の狼煙 Scenario 2 - Beacon Fire of Blood'''
| class="fc-route4" |'''第２話: フラッシュ・デイ Scenario 2 - Flash Day'''

|-
|'''Victory Condition:''' Defeat all enemies; Defeat ZX-01 '''Defeat Condition:''' Any allied unit is defeated '''Skill Point:''' Defeat the 4 Zonders in 2 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*GaoGaiGar (Guy)
*J-Der (J, Tomoro)
*Great Mazinger (Tetsuya)
*Venus A (Jun)
*Boss Borot (Boss, Nuke, Mucha)
*Kotetsu Jeeg (Jeeg)
*Big Shooter (Miwa)

|'''Victory Condition:''' (1) Defeat all enemies, (2) Defeat Dangel '''Defeat Condition:''' (1) Hyouma defeated (2) Any Allied Unit is defeated '''Skill Point:''' Defeat all enemies in 3 turns, do not lose any Federation Army squads '''Secret Requirements:''' '''Unit Acquisition:'''
*Combattler V (Hyoma, Juzo, Daisaku, Chizuru, Kosuke)
*Jegan (Federation Soldier) x 3

|'''Victory Condition:''' (1) Defeat the Magellan Kai-class Battleship (2) Defeat the Magellan Kai-class Battleship and Nuclear Missiles '''Defeat Condition:''' (1) Any ally unit is defeated (2) Nuclear Missiles reach the marked area on the map '''Skill Point:''' Defeat the enemy missiles and battleship in 7 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Clop-class (Federation Captain)
*Wildfalken (Seolla)
*MP Nu Gundam (Cobray)
*ZZ Gundam (Judau)
*Re-GZ BWS (Roux)
*Albion (Synapse, Paserov)
*GP03 Dendrobium (Kou)
*GM Cannon II (Keith)
*GM Custom (Burning)
*GM Custom (Bate)
*GM Custom (Monsha)
*GM Cannon II (Adel)
*Zeta Gundam (Kamille)
*Re-GZ BWS (Four)
*Methuss (Fa)
*Super Gundam (Emma)
*Armed Fortress Orchis parts for Gundam Stamen
*G Defensor Parts for Gundam Mk-II

|'''Victory Condition:''' Defeat any enemy battleship '''Defeat Condition:''' (1) Allied battleship is defeated; (2) Allied battleship is defeated, Selena is defeated '''Skill Point:''' Defeat the enemy battleship in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*ZZ Gundam (Judau)
*Re-GZ BWS (Roux)
*Nu Gundam (Amuro)
*Ra Cailum (Bright)
*Jegan (Katz)
*MP Nu Gundam (Keyra)
*AS Soleares (Selena, Elma)
*Incom & Funnel parts for MP Nu Gundam

|-
| colspan="4" class="fc-std-sc" |'''第３話: 逆襲！機界31原種 Scenario 3 - Counterattack! The 31 Machine Primevals!'''

|-
| colspan="4" |'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' (1) Ally battleship is defeated, One of the Machine Primevals reaches the edge of the map; (2) Ally battleship is defeated, One of the Machine Primevals reaches the edge of the map, J is defeated '''Skill Point:''' Defeat all enemies in 6 turns '''Secret Requirements:''' '''Unit Acquisition (Touma & Kusuha):'''
*J-Ark (J, Tomoro)
*Nu Gundam (Amuro)
*Ra Cailum (Bright, Torres)
*Jegan (Katz)
*MP Nu Gundam (Keyra)
*Albion (Synapse, Paserov)
*GP03 Dendrobium (Kou)
*GM Cannon II (Keith)
*GM Custom (Burning)
*GM Custom (Bate)
*GM Custom (Monsha)
*GM Cannon II (Adel)
*Zeta Gundam (Kamille)
*Re-GZ BWS (Four)
*Methuss (Fa)
*Super Gundam (Emma)
*Incom & Funnel parts for MP Nu Gundam
*Armed Fortress Orchis parts for Gundam Stamen
*G Defensor Parts for Gundam Mk-II
'''Unit Acquisition (Cobray & Selena):'''
*J-Ark (J, Tomoro)
*Mazinkaiser (Kouji)
*Diana A (Sayaka)
*Great Mazinger (Tetsuya)
*Venus A (Jun)
*Combattler V (Hyoma, Juzo, Daisaku, Chizuru, Kosuke)
*Koutetsu Jeeg (Jeeg)
*Big Shooter (Miwa)
*Shin Getter (Ryoma, Hayato, Benkei)
*Lady Command (Michiru)

|-
| colspan="4" class="fc-std-sc" |'''第４話：地獄門、開く Scenario 4 - The Gates of Hell Open'''

|-
| colspan="4" |'''Victory Condition:'''
*1st Part: Allied Battleship reaches the escape point in 5 turns, All Enemies are defeated in 5 turns
*2nd Part: Defeat all enemies
'''Defeat Condition:'''
*1st Part: Allied Battleship is defeated, Turn 6 starts
*2nd Part: SRX is defeated
'''Skill Point:''' Defeat all enemies in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*SRX (Damaged) (Ryuusei, Rai, Aya)

|-
| colspan="4" class="fc-std-sc" |'''第５話: 地球圏絶対防御線 Scenario 5 - The Earth Sphere’s Absolute Defense Line'''

|-
| colspan="4" |'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' (1) Ally battleship is defeated (2) Any allied unit is defeated '''Skill Point:''' Clear the stage in 6 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Mobieus Zero (Mwu)
*All Char's Counter Attack, Stardust Memory, and Zeta Gundam units are lost <ul><li>Nu Gundam(Amuro)</li><li>Ra Cailum (Bright, Torres)</li><li>MP Nu Gundam (Keyra)</li><li>Albion (Synapse, Paserov)</li><li>GP03 Dendrobium (Kou)</li><li>GM Cannon II (Keith)</li><li>GM Custom (Burning)</li><li>GM Custom (Bate)</li><li>GM Custom (Monsha)</li><li>GM Cannon II (Adel)</li><li>Zeta Gundam (Kamille)</li><li>Re-GZ BWS (Four)</li><li>Methuss (Fa)</li><li>Super Gundam (Emma)</li><li>Jegan (Katz)</li></ul>

|- class="fc-route-h"
|'''Touma Route''' Great Mazinger, Venus A, Boss Borot Steel Jeeg, Big Shooter
|'''Kusuha Route''' Getter Robo G, Lady Command Mazinger Z, Diana A Combattler V
|'''Cobray Route''' ZZ Gundam, ReGZ (BWS) Mobieus Zero
|'''Selena Route'''
|-
| class="fc-route1" |'''第６話：平和、遥か遠く Scenario 6 - A Faraway Peace'''
| class="fc-route2" |'''第６話：北米戦線、異常アリ Scenario 6 - Abnormalities on the North American Front'''
| class="fc-route3" |'''第６話：GUNDAM出撃 Scenario 6 - Gundam, Sortie'''
| class="fc-route4" |'''第６話：ザ・ビギニング Scenario 6 - The Beginning'''

|-
|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Any ally is defeated '''Skill Point:''' Defeat all enemies in 5 turns; Defeat the Yamata no Orochi last '''Secret Requirements:''' '''Unit Acquisition:'''
*GaiGar (Gai)
*Mic Sounders XIII (Mic Sounders XIII)

|'''Victory Condition:''' (1) Ally reaches the designated area; (2) Defeat all enemies '''Defeat Condition:''' Any ally defeated '''Skill Point:''' Reach target location without engaging in combat '''Secret Requirements:''' '''Unit Acquisition:'''
*Mazinkaiser → Mazinger Z (Kouji)
*Shin Getter Robo → Getter Robo G (Ryoma, Hayato, Benkei) 
*Dancouga (Shinobu, Sara, Masato, Ryo)

|'''Victory Condition:'''
*1st Part: Sigu is defeated, Vesalius is defeated
*2nd Part: Defeat all enemies 
'''Defeat Condition:'''
*1st Part: Any ally is defeated
*2nd Part: Any ally is defeated 
'''Skill Point:''' Accomplish either objective in 4 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Clop Class Battleship (Federation Officer)
*Wing Gundam Zero Kai (Heero)
*Gundam Deathscythe Hell Kai (Duo)
*Gundam Sandrock Kai (Quatre)
*Taurus (Hilde)
*Strike Gundam (Kira)

|'''Victory Condition:''' (1) AS Soleares reaches the designated point in 4 turns; (2) Defeat all enemies '''Defeat Condition:''' (1) Begin turn 5 without meeting victory conditions, Any ally is defeated; (2) Any ally is defeated '''Skill Point:''' Defeat all enemies in 4 turns and get the AS Soleares to the target square '''Secret Requirements:''' '''Unit Acquisition:'''
*CGUE (Rau)
*GINN (ZAFT Soldier) x 2
*Vesarius (Ades)

|-
| class="fc-route1" |'''第７話：燃えろ宙！妖花フローラの挑戦 Scenario 7 - Space Burns! The Enchanting Flora’s Challenge!'''
| class="fc-route2" |'''第７話：怒りの獣、野生の咆哮 Scenario 7 - The Wild Roar of the Raging Beast'''
| class="fc-route3" |'''第７話：崩壊の大地 Scenario 7 - Collapsing Land'''
| class="fc-route4" |'''第７話：ワンズ・ジャスティス Scenario 7 - One’s Own Justice'''

|-
|'''Victory Condition:''' 
*1st Part: Defeat all enemies
*2nd Part: Defeat all enemies
'''Defeat Condition:''' 
*1st Part: Any ally defeated
*2nd Part: Any ally defeated
'''Skill Point:''' Defeat all enemies in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*AnRyu (AnRyu)
*KouRyu (KouRyu)

|'''Victory Condition:''' (1) Defeat all enemies; (2) Defeat Dangel '''Defeat Condition:''' Any ally is defeated '''Skill Point:''' Defeat all Zubanzas, Boazan Flying Saucers, and Red Baloms within 4 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Black Wing (Alan)

|'''Victory Condition:''' (1) Defeat all enemies; (2) Archangel reaches the designated point, Defeat all enemies '''Defeat Condition:''' (1) Mwu is defeated; (2) Ally battleship is defeated, Kira or Mwu are defeated '''Skill Point:''' Defeat all enemies in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Strike Gundam (Kira)
*Archangel (Murrue, Natarle)
*Aile, Sword and Launcher Striker packs for Strike Gundam

|'''Victory Condition:''' Any ally reaches the designated point '''Defeat Condition:''' Any ally is defeated '''Skill Point:''' Defeat all enemies in 5 turns and get an allied unit to the target square '''Secret Requirements:''' '''Unit Acquisition:'''
*Altron Gundam (Wufei)
*Gundam Heavyarms Kai (Trowa)
*CGuE (Rau)
*Vesarius (Ades)
*Aegis Gundam (Athrun)
*Blitz Gundam (Nicol)
*Buster Gundam (Dearka)
*Duel Gundam (Yzak)

|-
| class="fc-route1" |'''第８話：立ち上がれ！勇気ある者達 Scenario 8 - Stand Up, People of Courage!'''
| class="fc-route2" |'''第８話：輝け！不死身の勇者 Scenario 8 - Shine, Undying Hero!'''
| class="fc-route3" |'''第８話：誘う声 Scenario 8 - An Inviting Voice'''
| class="fc-route4" |'''第８話：インビジブル・イントルーダー Scenario 8 - Invisible Intruder'''

|-
|'''Victory Condition:''' (1) Defeat all enemies; (2) ZX-02 is defeated '''Defeat Condition:''' (1) Any ally is defeated; (2) Gai is defeated, J is defeated '''Skill Point:''' Defeat all enemies in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*GaiGar → GaoGaiGar
*Mic Sounders XIII gains "Disc P", "Disc M", and "Disc X" attacks
*Goldymarg (Goldymarg)
*HyoRyu (HyoRyu)
*EnRyu (EnRyu)
*Big Volfogg (Big Volfogg)

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' (1) Any ally is defeated; (2) Akira is defeated '''Skill Point:''' Defeat the Bramble (retreats at 4000HP (E) / 6000HP (N) / 8000HP (H)) '''Secret Requirements:''' '''Unit Acquisition:'''
*Raideen (Akira)
*Bluegar (Jinguji, Mari)

|'''Victory Condition:'''
*1st Part: (1) Vesalius is defeated; (2) Defeat all enemies
*2nd Part: (1) Defeat all enemies; (2) Defeat all enemies except Valk Baal 
'''Defeat Condition:'''
*1st Part: Ally battleship is defeated, Seolla or Cobray are defeated
*2nd Part: Any ally is defeated 
'''Skill Point:''' Defeat Aegis, Duel, Buster, and Blitz Gundams in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Zeta Gundam (Kamille)
*Re-GZ BWS (Four)
*Methuss (Fa)
*Super Gundam (Emma)
*Ra Cailum (Bright, Torres)
*MP Nu Gundam (Cobray)
*Werkbau (Cobray)
*G Defensor parts for Gundam Mk-II

|'''Victory Condition:''' Reach turn 6 '''Defeat Condition:''' Any ally is defeated '''Skill Point:''' Defeat all the Jegans '''Secret Requirements:''' '''Unit Acquisition:'''
*CGuE (Rau)
*Vesarius (Ades)
*Aegis Gundam (Athrun)
*Blitz Gundam (Nicol)
*Buster Gundam (Dearka)
*Duel Gundam (Yzak)

|-
| class="fc-route1" |'''第９話：内なる修羅 Scenario 9 - Demons of War Within'''
| class="fc-route2" |'''第９話：再会！ニューヨーク解放戦 Scenario 9 - Reunion! The Battle to Retake New York'''
| class="fc-route3" |'''第９話：正義の在処 Scenario 9 - Where Justice Can Be Found'''
| class="fc-route4" |'''第９話：アベンジャー Scenario 9 - Avenger'''

|-
|'''Victory Condition:''' (1) Defeat all enemies; (2) Defeat Raioh '''Defeat Condition:''' (1) Any ally defeated; (2) Sanger is defeated '''Skill Point:''' Defeat the Bramble in 4 turns (retreats at 4000HP (E) / 6000HP (N) / 8000HP (H)) '''Secret Requirements:''' '''Unit Acquisition:'''
*Dygenguar (Sanger)
*Huckebein Mk-III Trombe (Ratsel)
*Raideen (Akira)
*Bluegar (Jingunji, Mari)
*Mazinger Z (Kouji)
**Mazinger Z (Kouji) and Great Mazinger (Tetsuya) gain the "Double Mazinger Blade" and "Double Burning Fire" combination attacks
*Diana A (Sayaka)
*Getter Robo G (Ryoma, Hayato, Benkei)
*Lady Command (Michiru)
*Combattler V (Hyoma, Juzo, Daisaku, Chizuru, Kosuke)

|'''Victory Condition:''' (1) Defeat all enemies; (2) Dancouga reaches the designated point; (3) Defeated Deathgaia, Dangel, and Warchamedes '''Defeat Condition:''' (1) Shinobu, Kusuha, or Bullet are defeated; (2) Shinobu, Kusuha, Bullet, or Alan are defeated; (3) Alan is defeated '''Skill Point:''' Clear the map in 8 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Black Wing (Alan)
*Dygenguar (Sanger)
*Huckebein Mk-III Trombe (Ratsel)

|'''Victory Condition:''' (1) Vesalius is defeated; Reduce the Muge Battleship under 2000 HP before it reaches the edge of the map '''Defeat Condition:''' (1) Ally battleship is defeated; (2) Muge Battleship reaches the western edge of the map '''Skill Point:''' Defeat all enemies before reducing the Muge Mothership's HP below 2000 or defeating it '''Secret Requirements:''' '''Unit Acquisition:'''

|'''Victory Condition:''' (1) Reduce the Archangel's HP to 50% or less, Defeat all enemies besides the Archangel; (2) Reduce the Varuch Ishar to 4000 HP or less. '''Defeat Condition:''' Any ally is defeated '''Skill Point:''' Defeat the Varuch Ishar (flees at 4000 HP) '''Secret Requirements:''' '''Unit Acquisition:'''
*CGuE (Rau)
*Vesarius (Ades)
*Aegis Gundam (Athrun)
*Blitz Gundam (Nicol)
*Buster Gundam (Dearka)
*Duel Gundam (Yzak)

|-
| class="fc-route1" |'''第１０話：激震の地底帝国 Scenario 10 - Tremors in the Underground Empire'''
| class="fc-route2" |'''第１０話：龍を喰らうもの Scenario 10 - That Which Devours the Dragon'''
| class="fc-route3" |'''第１０話：消えていく光 Scenario 10 - The Fading Light'''
| class="fc-route4" |'''第１０話：グッバイ・フレンズ Scenario 10 - Goodbye, Friends'''

|-
|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' All allies defeated, Science Fortress Lab destroyed '''Skill Point:''' Clear the map without the Science Fortress Lab taking damage '''Secret Requirements:''' '''Unit Acquisition:'''
*Raioh loses the "System LIOH" ability
*Raioh gains the "Rising Meteor" attack
*Dygenguar (Sanger)
*Huckebein Mk-III Trombe (Ratsel)

|'''Victory Condition:''' (1) Sanger is defeated; (2)(3) Defeat all enemies; (4)(5) ZX-02 is defeated '''Defeat Condition:''' (1) Bullet is defeated; (2) Sanger or Rastel are defeated; (3) Any ally is defeated; (4) Guy, Sanger, or Rastel are defeated; (5) Guy, J, Sanger, or Rastel are defeated '''Skill Point:''' Reduce Shin RyuOuKi to below 10000 HP within 3 turns of its arrival '''Secret Requirements:''' '''Unit Acquisition:'''
*Dygenguar (Sanger)
*Huckebein Mk-III Trombe (Ratsel)
*GaiGar (Guy)
*GaoGaiGar (Guy)
*Mic Sounders XIII (Mic Sounders XIII)
*Goldymarg (Goldymarg)
*HyoRyu (HyoRyu)
*EnRyu (Enryu)
*Volfogg (Volfogg)
*Great Mazinger (Tetsuya)
*Venus A (Jun)
*Boss Borot (Boss, Mucha, Nuke)
*Kotetsu Jeeg (Jeeg)
*Big Shooter (Miwa)
*Stealth Gao II parts for GaoGaiGar
*Gunbot parts for Volfogg

|'''Victory Condition:''' (1) Reduce the Blitz Gundam to under 7000HP; (2) The Gamow is defeated; (3) The Gamow is defeated and Imperial Guard are defeated '''Defeat Condition:''' (1)(2) Any ally is defeated; (3) Ally battleship is defeated '''Skill Point:''' Defeat the Gamow (retreats at 4000HP (E) / 6000HP (N) / 8000HP (H)) '''Secret Requirements:''' '''Unit Acquisition:'''
*Qubeley Mk-II (Puru)
*Qubeley Mk-II (Puru Two)
*Hyaku Shiki (Beecha)
*Gundam Mk-II (Elle)
*Jegan (Mondo)
*Megarider (Iino)
*YF-19 (Isamu)
*YF-21 (Guld)

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' (1) Any ally is defeated; (2) Ally battleship is defeated; (3) Ally battleship is defeated, Isamu or Guld are defeated '''Skill Point:''' Clear the map in 6 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Zeta Gundam (Kamille)
*Methuss (Fa)
*ReGZ (Four)
*Super Gundam (Emma)
*Mobius Zero (Mwu)
*Wing Gundam Zero Kai (Heero)
*Gundam Sandrock Kai (Quatre)
*Gundam Deathscythe Hell Kai (Duo)
*Taurus (Hilde)
*ZZ Gundam (Judau)
*ReGZ BWS (Roux)
*Qubeley Mk-II (Puru)
*Qubeley Mk-II (Puru Two)
*Hyaku Shiki (Beecha)
*Gundam Mk-II (Elle)
*Jegan (Mondo)
*Megarider (Iino)
*YF-19 (Isamu)
*YF-21 (Guld)

|-
| class="fc-route1" |'''第１１話：戦場の邂合、そして決別 Scenario 11 - An Battlefield Encounter, and Then a Departure'''
| class="fc-route2" |'''第１１話：新たなる人類 Scenario 11 - A New Mankind'''
| class="fc-route3" |'''第１１話：君と戦場で Scenario 11 - On the Battlefield with You'''
| class="fc-route4" |'''第１１話：パワー・ジャンクション Scenario 11 - Power Junction'''

|-
|'''Victory Condition:''' (1) Defeat all enemies; (2) Defeat Vesalius '''Defeat Condition:''' Ally battleship is defeated, Kira or Mwu are defeated '''Skill Point:''' Defeat all enemies in 7 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Archangel (Murrue)
*Strike Gundam (Kira)
*Moebius Zero (Mwu)
*Stealth Gao II Parts for GaoGaiGar
*Aile, Sword, and Launcher Striker packs for Strike Gundam

|'''Victory Condition:''' (1) Defeat all enemies; (2) Vesalius is defeated '''Defeat Condition:''' (1) Ally battleship is defeated, Kira or Mwu are defeated; (2) Ally battleship is defeated '''Skill Point:''' Defeat all enemies in 7 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Strike Gundam (Kira)
*Mobeius Zero (Mwu)
*Archangel (Murrue, Natarle)
*YF-19 (Isamu)
*YF-21 (Guld)
*Aile, Sword, and Launcher Striker packs for Strike Gundam

|'''Victory Condition:''' (1) Defeat all enemies (2) ZX-02 is defeated '''Defeat Condition:''' (1) Kira is defeated; (2) Any ally is defeated '''Skill Point:''' Defeat all enemies in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Wildburger (Arado)
*Great Mazinger (Tetsuya)
*Venus A (Jun)
*Boss Borot (Boss)
*Dancouga (Shinobu, Sarah, Masato, Ryo)
*Raideen (Akira)
*Bluegar (Jingunji)
*Mazinger Z (Kouji)
*Diana A (Sayaka)
*Getter Robo G (Ryoma, Hayato, Benkei)
*Lady Command (Michiru)
*Star Gaogaigar (Gai)
*Goldymarg (Goldymarg)
*Mic Sounders the 13th (Mic)
*Hyoryu (Hyoryu)
*Enryu (Enryu
*Big Volfogg (Volfogg)

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Defeat all enemies in 7 turns '''Secret Requirements:''' '''Unit Acquisition:'''

|-
| class="fc-route1" |'''第１２話：守るべきモノ Scenario 12 - What You Must Protect'''
| class="fc-route2" |'''第１２話：別れの宇宙 Scenario 12 - Farewells in Space'''
| class="fc-route3" |'''第１２話：ディーンの火 Scenario 12 - The Flames of Deen'''
| class="fc-route4" |'''第１２話：コンクルージョン Scenario 12 - Conclusion'''

|-
|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' All enemies defeated '''Skill Point:''' Defeat all enemies in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Gundam Wing Zero (Heero)
*Gundam Deathscythe Hell Kai (Duo)
*Gundam Sandrock Kai (Quatre)
*Gundam Heavyarms Kai (Trowa)
*Altron Gundam (Wufei)
*Taurus (Hilde)
*Zeta Gundam (Kamille)
*Re-GZ BWS (Four)
*Methuss (Fa)
*Gundam Mk-II (Emma)
*ZZ Gundam (Judau)
*Qubeley Mk-II (Puru)
*Qubeley Mk-II (Puru Two)
*Hyaku Shiki (Beecha)
*Gundam Mk-II (Elle)
*Jegan (Mondo)
*Megarider (Iino)
*YF-19 (Isamu) (After stage)
*YF-21 (Guld) (After stage)
*G Defensor parts for Gundam Mk-II

|'''Victory Condition:''' (1) Defeat all enemies; (2) Defeat Shin RyoOhKi; (3) Defeat the Imperial Guard '''Defeat Condition:''' (1)(2) Any ally is defeated; (3) Ally battleship is defeated '''Skill Point:''' Defeat Shin RyuOhKi before Victory Conditions are met '''Secret Requirements:''' '''Unit Acquisition:'''
*Gundam Wing Zero Kai (Heero)
*Gundam Deathscythe Hell Kai (Duo)
*Gundam Sandrock Kai (Quatre)
*Gundam Heavyarms Kai (Trowa)
*Altron Gundam (Wufei)
*Taurus (Hilde)
*Zeta Gundam (Kamille)
*Re-GZ BWS (Four)
*Methuss (Fa)
*Gundam Mk-II (Emma)
*ZZ Gundam (Judau)
*Qubeley Mk-II (Puru)
*Qubeley Mk-II (Puru Two)
*Hyaku Shiki (Beecha)
*Gundam Mk-II (Elle)
*Jegan (Mondo)
*Megarider (Iino)
*G Defensor parts for Gundam Mk-II

|'''Victory Condition:''' (1) Bramble, Magnum, and Zangaioh are defeated; (2) Defeat all enemies; (3) Defeat Valk Baal '''Defeat Condition:''' (1) Ally battleship is defeated, Arado is defeated; (2) Cobray, Arado or Seolla are defeated; (3) Cobray, Viletta, Sanger, or Rastel are defeated '''Skill Point:''' Clear the map in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Werkbau gains the "Axion Buster" attack
*Gundam Heavyarms Kai (Trowa)
*Altron Gundam (Wufei)
*Dygenguar (Sanger)
*Huckebein Mk-III Trombe (Ratsel)
*R-GUN Powered (Viletta)

|'''Victory Condition:''' (1)(2) ZX-08 is defeated; (3) Varuch Ishar is defeated '''Defeat Condition:''' (1) Ally battleship is defeated, (2) Ally battleship is defeated, J is defeated; (3) Ally battleships is defeated, Selena, Viletta, Sanger, or Rastel are defeated '''Skill Point:''' Defeat ZX-02 in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*J-ARK (J, Tomoro)
*R-GUN Powered (Viletta)
*Dygenguar (Sanger)
*Huckebein Mk-III Trombe (Ratsel)
*Vegalion (Slay)

|-
| colspan="4" class="fc-std-sc" |'''第１３話：もう一度、自らの足で Scenario 13 - Once Again, On Your Feet'''

|-
| colspan="4" |'''Victory Condition:''' ZX-06 is defeated '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Clear the map in 6 turns; Defeat all other enemies before ZX-06 '''Secret Requirements:''' '''Unit Acquisition:'''
*Evangelion Unit 0 Custom (Rei)
*Evangelion Unit 1 (Shinji)
*Evangelion Unit 2 (Asuka)

|-
| colspan="4" class="fc-std-sc" |'''第１４話：オペレーション・ハルパー Scenario 14 - Operation Harper'''

|-
| colspan="4" |'''Victory Condition:''' Reduce Hermoz Ehad's HP to below 120000HP (E) / 90000HP (N) / 80000HP (H) '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Achieve the victory condition in 7 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*HyoRyu (HyoRyu)
*EnRyu (EnRyu)

|-
| colspan="4" class="fc-std-sc" |'''第１５話：遥かなる凱歌 Scenario 15 - A Faroff Victory Song'''

|-
| colspan="4" |'''Victory Condition:''' Defeat the Combine Primeval '''Defeat Condition:''' Ally Battleship is defeated, J is defeated '''Skill Point:''' Defeat all enemies in 7 turns, leaving the combined Primeval for last '''Secret Requirements:''' '''Unit Acquisition:'''
*J-Ark (J, Tomoro)
*ALL units are unavailable until clearing Scenario 18

|-
| colspan="4" class="fc-std-sc" |'''第１６話：導かれる魂、銀河で Scenario 16 - Souls Guided by the Galaxy'''

|-
| colspan="4" |'''Victory Condition:'''
*1st Part: Defeat all enemies
*2nd Part: Defeat all enemies
'''Defeat Condition:'''
*1st Part: Ideon is defeated
*2nd Part: Any ally is defeated
'''Skill Point:''' Defeat all enemies in 4 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Ideon (Cosmo, Kasha, Bess → Moera)
*VF-17S Nightmare (Kinryu)
*VF-17D Nightmare (Gamlin)
*VF-17D Nightmare (Docker)
*Battle 7 (Max, Exedore, Miho, Sally)
*Soloship (Bess)

|-
| colspan="4" class="fc-std-sc" |'''第１７話：ディスコード・ハーモニー Scenario 17 - Discord / Harmony'''

|-
| colspan="4" |'''Victory Condition:''' (1)(2) Defeat the Zig Mac; (3) Defeat FZ-109F Elgarthorn '''Defeat Condition:''' (1) Any ally is defeated; (2) Any ally is defeated, Zig Mac moves next to the Soloship (3) '''Skill Point:''' Meet victory the condition in 4 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Battle 7 can now transform into "Enhanced Attack Mode"
*VF-17D Nightmare (Docker)

|-
| colspan="4" class="fc-std-sc" |'''第１８話：銀河流浪 Scenario 18 - Galactic Wandering'''

|-
| colspan="4" |'''Victory Condition:'''
*1st Part: Defeat FZ-109F Elgarthorn
*2nd Part: Defeat Zig Mac
'''Defeat Condition:'''
*1st Part: Any ally is defeated
*2nd Part: Any ally is defeated
'''Skill Point:''' Meet victory conditions in 3 turns '''Secret Requirements:'''
*Duel Gundam
**Take the Earth Route
*VF-1J S Valkyrie
**Take the Earth Route
*LaGOWE
**Take the Earth Route
'''Unit Acquisition:'''
*VF-17D Nightmare (Physica)
*VF-17S (Kinryu), VF-17D (Gamlin), and VF-17D (Physica) gain the "Diamond Force Attack" combination Attack
*Ideon gains the "Omnidirectional Missile" attack
*All Ideon and Macross 7 units are lost <ul><li>Ideon (Cosmo, Kasha, Moera)</li><li>Soloship (Bess)</li><li>Battle 7 (Max, Exedore, Miho, Sally)</li><li>VF-17S Nightmare (Kinryu)</li><li>VF-17D Nightmare (Physica)</li><li>VF-17D Nightmare (Gamlin)</li>

|}
 

==Stages 19 - 33==
{| width="100%"
|- class="fc-route-h"
| width="50%" |'''Descend to Earth''' Gundam 0083 Gundam Z ZZ Gundam Char's CounterAttack Gundam Wing Gundam SEED Macross 7 Macross Plus Evangelion
| width="50%" |'''Mount a Lunar offensive''' GaoGaiGar Ideon Mazinger (Z, Great) Getter Robo Steel Jeeg Combattler V Gaiking Raideen Dancouga GoShogun

|-
| class="fc-route1" |'''第１９話：宇宙に降る星 Scenario 19 - Stars Falling in Space'''
| class="fc-route3" |'''第１９話：悪夢への招待状 Scenario 19 - A Written Invitation to a Nightmare'''

|-
|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated, Kira is defeated '''Skill Point:''' Destroy all enemies in 6 turns '''Secret Requirements:'''
*Duel Gundam
**Destroy Yzak.
'''Unit Acquisition:'''
*Nu Gundam (Amuro)
*Jegan (Katz)
*MP Nu Gundam (Kayra)
*Incom and Fin Funnel parts for MP Nu Gundam
*Kira unlocks the SEED pilot skill
*Skygrasper
*Ra Cailum (Bright, Torres)

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Destroy the Muge battleship in 6 turns (retreats at 6000HP (E) / 8000HP (N) / 10000 HP (H)) '''Secret Requirements:''' 
'''Unit Acquisition:'''
*Daiku Maryu (Pete, Midori)
*Gaiking (Sanshiro)
*Skylar (Fan Li)
*Bazolar (Yamagatake)
*Nesser (Bunta)

|-
| class="fc-route1" |'''第２０話：強襲、砂漠の虎 Scenario 20 - Assault of the Desert Tiger'''
| class="fc-route3" |'''第２０話：異邦人達の帰還 Scenario 20 - The Foreigners Return'''

|-
|'''Victory Condition:''' Defeat the Lesseps '''Defeat Condition:''' Ally battleship is defeated, Kira is defeated '''Skill Point:''' Defeat the Lesseps in 6 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Kira unlocks the SEED pilot skill
*Albion (Synapse, Paserov)
*Gundam Stamen (Kou)
*GM Cannon II (Keith)
*GM Custom (Burning)
*GM Custom (Bate)
*GM Custom (Monsha)
*GM Cannon II (Adel)
*Gundam GP01fb
*Armed Base Orchis parts for Gundam Stamen

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Destroy Helmut's Muge battleship in 4 turns (retreats at 6000HP (E) / 8000HP (N) / 10000 HP(H)) '''Secret Requirements:''' '''Unit Acquisition:'''
*Ideon (Cosmo, Kasha, Moera)
*Ideon gains the "Ideon Sword" and "Ideon Sword (MAP)" attacks
*Soloship (Bess, Hatari)

|-
| class="fc-route1" |'''第２１話：プリティ・デビル Scenario 21 - Pretty Devil'''
| class="fc-route3" |'''第２１話：裏切りの代償 Scenario 21 - The Cost of Betrayal'''

|-
|'''Victory Condition:'''
*1st Part: Gigil's ship is defeated
*2nd Part: Gigil's ship is defeated 
'''Defeat Condition:'''
*1st Part: Any ally is defeated
*2nd Part: Basara is defeated
'''Skill Point:''' Destroy Gigil before he moves adjacent to Sivil '''Secret Requirements:'''
*LaGOWE
**Waltfeld and Dacosta must both survive and get a combined total of 10 kills or more on the first half of the scenario.
*VF-1J
**Milia must get a total of 10 kills in the first half of the scenario.
'''Unit Acquisition:'''
*VF-17S Nightmare (Kinryu)
*VF-17D Nightmare (Gamlin)
*VF-17D Nightmare (Physica)
*VF-1J S Valkyrie (Milia)
*LaGOWE (Waldfelt)
*BuCUE (Dacosta)
*Skygrasper (Cagalli)
*VF-19 Kai Fire Valkyrie (Basara)
*VF-17S Nighmare (Milia)
*VF-1J S Valkyrie

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Any ally is defeated '''Skill Point:''' Destroy all enemies in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Goshogun (Shingo, Killy, Remi)
*Good Thunder (Sabranth)

|-
| class="fc-route1" |'''第２２話：砂塵の果て Scenario 22 - Beyond the Clouds of Sand'''
| class="fc-route3" |'''第２２話：発動する力、無限大 Scenario 22 - Infinite Activation Power'''

|-
|'''Victory Condition:''' (1) Defeat the Lesseps; (2) Waltfeld is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated '''Skill Point:''' Defeat the Lesseps in 5 turns '''Secret Requirements:'''
*LaGOWE
**Kira must destroy Waltfeld's LaGOWE while in SEED. (Kira has to activate SEED mode before the event that ends the stage.)
'''Unit Acquisition:'''
*Kira unlocks the SEED pilot skill

|'''Victory Condition:''' (1) Soloship reaches the computer facility; (2) Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Get the Soloship to the indicated area in 4 turns without it taking any damage '''Secret Requirements:''' '''Unit Acquisition:'''
*HyoRyu (HyoRyu)
*EnRyu (EnRyu)

|-
| class="fc-route1" |'''第２３話：エモーション・ハイ Scenario 23 - Emotion High'''
| class="fc-route3" |'''第２３話：決戦！地獄の月荒野 Scenario 23 - Decisive Battle in the Hellish Lunar Wilderness!'''

|-
|'''Victory Condition:''' (1) Defeat 2 Ghosts; (2) Defeat all enemies; (3) Basara sings to Sivil, All ZAFT forces are defeated '''Defeat Condition:''' (1) Ally battleship is defeated, Battle 7 is defeated; (2) Ally battleship is defeated, Battle 7 is defeated, Isamu or Guld are defeated; (3) Ally battleship is defeated, Isamu, Guld, or Basara are defeated '''Skill Point:''' Clear the map in 9 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*YF-19's "Full Volley" attacks gains +200 Attack power
*YF-19 and YF-21 gain the "Double Pinpoint Barrier Punch" combination attack
*Battle 7 (Max, Exedore, Miho, Sally)
*VF-19 Kai Fire Valkyrie (Basara)
*Mazinkaiser
*Shin Getter Robo

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Clear the map in 9 turns '''Secret Requirements:''' '''Unit Acquisition:'''

|-
| colspan="2" class="fc-std-sc" |'''第２４話：戦神の星で Scenario 24 - On the Planet of the War God'''

|-
| colspan="2" |'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' (1) Any ally is defeated; (2) Ally battleship is defeated '''Skill Point:''' Destroy all enemies in 3 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*VF-19 Kai Fire Valkyrie (Basara)
*VF-11 MAXL Kai (Mylene)
*VF-17 Kai Nightmare (Ray, Veffidas)
*Tallgeese III (Zechs)
*Taurus (Noin)
*Voltes V (Kenichi, Ippei, Daijiroh, Hiyoshi, Megumi)
*Daimos (Kazuya)
*Garuba FX-II (Kyoshiro, Nana)

|-
| colspan="2" class="fc-std-sc" |'''第２５話：選ばれし者、選びし者 Scenario 25 - Those Who Are Chosen, Those Who Choose'''

|-
| colspan="2" |'''Victory Condition:''' (1) Hermos is defeated; (2) Zifrud is defeated '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Clear the map in 8 turns '''Secret Requirements:''' '''Unit Acquisition:'''

|-
| colspan="2" class="fc-std-sc" |'''第２６話：かりそめの旅人 Scenario 26 - Transitory Traveler'''

|-
| colspan="2" |'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated, Temjin, Fei Yen, or Apharmd are defeated '''Skill Point:''' Destroy all enemies in 3 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Temjin 747J (Chief)
*Fei Yen the Knight (Fei)
*Apharmd The Hatter (The Hatter)

|-
| colspan="2" class="fc-std-sc" |'''第２７話：勇気ある者達の誓い Scenario 27 - The Oath of the Courageous'''

|-
| colspan="2" |'''Victory Condition:'''
*1st Part: Defeat all enemies
*2nd Part: (1) Defeat all enemies; (2) Defeat the Z-Master within (10 (E) / 7 (N) / 5 (H)) turns 
'''Defeat Condition:'''
*1st Part: Ally battleship is defeated, Gai is defeated
*2nd Part: (1) Ally battleship is defeated, Gai or J are defeated; (2) (10 (E) / 7 (N) / 5 (H)) turns have passed, Ally battleship is defeated, Gai or J are defeated 
'''Skill Point:''' Destroy all enemies in 7 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*J-Ark (J, Tomoro)

|-
| colspan="2" class="fc-std-sc" |'''第２８話：いつか星の海へ Scenario 28 - Someday, In the Sea of Stars'''

|-
| colspan="2" |'''Victory Condition:''' (1)(2) Defeat the Zonder Robo; (3) Defeat the Zonder Robo within 6 attacks from Star GaoGaiGar; (4)(5) Defeat all enemies '''Defeat Condition:''' (1) Galeon is defeated; (2) Ally battleship is defeated, Galeon is defeated; (3) Ally battleship or Gai are defeated, Zonder Robo is not defeated within 6 attacks from Star GaoGaiGar (4) Main Character is defeated; (5) Ally battleship is defeated '''Skill Point:''' Destroy the Zonuder Robo in 5 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Galeon (Galeon)
*Star GaoGaiGar/GaoGaiGar (Gai)
*YF-19 (Isamu)
*YF-21 (Guld)
*Battle 7 (Max)
*VF-17S Nightmare (Milia)
*VF-17D Nightmare (Gamlin)
*VF-17D Nightmare (Physica)
*VF-19 Kai Fire Valkyrie (Basara)
*VF-11 MAXL Kai (Mylene)
*VF-17 Kai Nightmare (Ray, Veffidas)
*HyoRyu (HyoRyu)
*EnRyu (EnRyu)
*Goldymarg (Goldymarg)
*Volfogg (Volfogg)
*Mic Sounders XIII (Mic Sounder XIII)
*Ideon (Cosmo, Kasha, Moera)
*Soloship (Bess, Hatari)
*Star GaoGaiGar (Guy, Choryujin, Goldymarg, Mic, Volfogg)
*Dygenguar (Sanger)
*Aussenseiter (Ratsel)
*R-Blade Custom (Ryusei)
*R-Gun Powered (Viletta)

|-
| colspan="2" class="fc-std-sc" |'''第２９話：押された烙印 Scenario 29 - Branded with the Mark'''

|-
| colspan="2" |'''Victory Condition:''' (1)(2) Defeat all enemies '''Defeat Condition:''' (1) Ally battleship is defeated; (2) Ally battleship is defeated, Cagalli is defeated '''Skill Point:''' Destroy all enemies in 6 turns '''Secret Requirements:'''
*Destroid Monster
**Take the Space Route
*FBz-99G
**Take the Space Route
*Strike Rouge IWSP
**Cagalli must have 30 or more kills by the end of this stage.
***Take the Alaska Route
*Duel Gundam
**Take the Alaska Route
'''Unit Acquisition:'''
*GaoFighGar (Guy)
*HyoRyu (HyoRyu)
*EnRyu (EnRyu)
*Goldymarg (Goldymarg)
*Volfogg (Volfogg)/Big Volfogg (Big Volfogg)
*Mic Sounders XIII (Mic Sounders XIII)
*AnRyu (AnRyu)
*KouRyu (KouRyu)
*Ra Cailum (Bright, Torres)

|- class="fc-route-h"
|'''Head to Alaska''' Gundam (0083, Z, ZZ, CCA, Wing, SEED) Daitarn 3 Mazinger (Z, Great) Steel Jeeg Voltes V Daimos Dancouga Evangelion
|'''Go to Space''' GaoGaiGar Ideon Getter Robo Combattler V GaiKing Raideen Goshogun Macross (DYRL, 7, Plus) Virtual On

|-
| class="fc-route2" |'''第３０話：終わらない閃光 Scenario 30 - Unending Flashes of Light'''
| class="fc-route4" |'''第３０話：ロスト・ディーヴァ Scenario 30 - Lost Diva'''

|-
|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated, Kira is defeated '''Skill Point:''' Clear the map in 7 turns '''Secret Requirements:'''
*Strike Rouge IWSP
**Mwu must defeat Dearka
**After the event, Kira must defeat Athrun while both are in SEED.
'''Unit Acquisition:'''
*Skygrasper (Cagalli)
*Strike Gundam (Kira)
*Kira unlocks the SEED pilot skill
*Cagalli unlocks the SEED pilot skill (needs verification)
*Archangel loses Natarle as a subpilot

|'''Victory Condition:''' (1)(2) Defeat all enemies '''Defeat Condition:''' (1) Any ally is defeated: (2) Ally battleship is defeated, Fire Bomber, Diamond Force, or Skull Squadron are defeated '''Skill Point:''' In 6 turns, destroy Glavil and Gavil. You must destroy Glavil before Gavil '''Secret Requirements:'''
*Gavil and FBz-99G Zaubergeran
**Gamlin must defeat Gavil
'''Unit Acquisition:'''
*YF-19 (Isamu) (Before Deploying)
*YF-21 (Guld) (Before Deploying)
*VF-1S S Valkyrie (Focker)
*VF-1S S Valkyrie (Hikaru)
*VF-1A S Valkyrie (Kakizaki)
*VF-17D Nightmare (Gamlin)
*VF-17D Nightmare (Physica)
*VF-19 Kai Fire Valkyrie (Basara)
*VF-11 MAXL Kai (Mylene)
*VF-17 Kai Nightmare (Ray, Veffidas)

|-
| class="fc-route2" |'''第３１話：青き清浄なる世界のために Scenario 31 - For Our Blue & Pure World'''
| class="fc-route4" |'''第３１話：禁断の惑星へ Scenario 31 - To the Forbidden Planet'''

|-
|'''Victory Condition:''' (1) Defeat all enemies; (2)(3) Defeat all Mobile Dolls, All ZAFT Units retreat '''Defeat Condition:''' (1)(2) Ally battleship is defeated, Heero is defeated; (3) Ally battleship is defeated '''Skill Point:''' Do not let a single ZAFT machine get shot down '''Secret Requirements:'''
*Duel Gundam
**Yzak must survive the scenario.
'''Unit Acquisition:'''
*Archangel gains Newman as a subpilot
*Freedom Gundam (Kira)
*Daitarn 3 (Banjo)
*Black Wing (Alan)

|'''Victory Condition:'''
*1st Part: Defeat all enemies
*2nd Part: Defeat Gepelnitch
'''Defeat Condition:'''
*1st Part: Any ally is defeated
*2nd Part: Ally battleship is defeated, Basara or Gamlin are defeated
'''Skill Point:''' In 7 turns, destroy Glavil and Gavil and make Gepelnitch's ship retreat (at 50,000 HP) '''Secret Requirements:'''
*Destroid Monster
**Get the Skill Point on this stage.
*Gavil and FBz-99G Zaubergeran
**Gamlin must defeat Gavil 
'''Unit Acquisition:'''
*Destroid Monster

|-
| class="fc-route2" |'''第３２話：守護神の巫女 Scenario 32 - Priestess of the Guardian God'''
| class="fc-route4" |'''第３２話：インフィニティ・ソウル Scenario 32 - Infinity Soul'''

|-
|'''Victory Condition:''' (1)(2) Defeat all enemies '''Defeat Condition:''' Any Ally is defeated; Ally battleship is defeated, Sanger or Rastel are defeated '''Skill Point:''' In 5 turns, destroy the General of Hell or Flora. '''Secret Requirements:''' '''Unit Acquisition:'''
*Dygenguar (Sanger)
*Assenseiter (Ratsel)

|'''Victory Condition:''' (1) Valgo is defeated; (2)(3) Defeat all enemies '''Defeat Condition:''' (1) Mylene, Ray, or Gamlin are defeated; (2) Basara, Mylene, Ray, or Gamlin are defeated; (3) Ideon is defeated '''Skill Point:''' In 6 turns, destroy Valgo '''Secret Requirements:'''
*Gavil and FBz-99G Zaubergeran
**Gamlin must defeat Gavil 
'''Unit Acquisition:'''
*VF-17D Nightmare → VF-17S Nightmare (Gamlin)
*VF-17D Nightmare (Docker)
**VF-17S (Gamlin), VF-17D (Physica) and VF-17D (Docker) gain the "Diamond Force Attack" combination attack
*VF-19 Kai Fire Valkyrie, VF-11 MAXL Kai, and VF-17 Kai Nightmare gain the "Sound Booster" mech ability
**All VF-19 Kai Fire Valkyrie SB Songs gain (MAP) and (ALL) combination attack variants when Sound Booster activates.
**All VF-11 MAXL Kai SB Songs gain (MAP) and (ALL) combination attack variants when Sound Booster activates.
*Ideon (Cosmo, Kasha, Moera)
** Ideon gains the "Ideon Sword" and "Ideon Sword (MAP)" attacks when IDE gauge is full, and HP is below 30%
*Soloship (Bess, Hatari)

|-
| class="fc-route2" |'''第３３話：暁への脱出 Scenario 33 - Escape to Daybreak'''
| class="fc-route4" |'''第３３話：受け継ぎし遺産 Scenario 33 - The Successor's Inheritance'''

|-
|'''Victory Condition:''' (1)(2) Defeat all enemies besides the Albion '''Defeat Condition:''' (1) Ally battleship is defeated, Kira, Shinobu, or Alan are defeated, Albion is defeated; (2) Kira, Shinobu, Alan, Mwu, or Cagalli are defeated '''Skill Point:''' In 8 turns, destroy all enemies except the Albion '''Secret Requirements:''' '''Unit Acquisition:'''
*Strike Gundam (Mwu)
*Strike Rouge (Cagailli)
*M1 Astray (Juri)
*M1 Astray (Mayura)
*M1 Astray (Asagi)
*Justice Gundam (Athrun)
*Buster Gundam (Dearka)
*Mazinger Z gains the "Giant Swing Rocket Punch" attack
*Great Mazinger gains the "Great Booster" attack
*Koutetsu Jeeg stats are enhanced and can transform into Jeeg Panzeroid
*Dancouga and Black Wing can combine into Final Dancouga.

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated, Akira or Jinguji are defeated '''Skill Point:''' In 8 turns, destroy Etzira, Valgo, Glavil, Gabro Zan, and Gije '''Secret Requirements:''' '''Unit Acquisition:'''
*VF-1A S Valkyrie (Kakizaki)
*Raideen gains the Mutron Open mech ability
*Ideon (Cosmo, Kasha, Moera)
*Soloship (Bess, Hatari)
*Battle 7 (Max, Exedore, Miho, Sally)
*VF-1S S Valkyrie (Fokker)
*VF-1S S Valkyrie (Hikaru)
*VF-1A S Valkyrie (Kakizaki)
*YF-19 (Isamu)
*YF-21 (Guld)
*VF-19 Kai Fire Valkyrie (Basara)
*VF-11 MAXL Kai (Mylene)
*VF-17 Kai Nightmare (Ray, Veffidas)
*VF-17S Nightmare (Gamlin)
*VF-17D Nightmare (Physica)
*VF-17D Nightmare (Docker)

|}
 

==Stages 34 - 44==
{| width="100%"
|- class="fc-route-h"
| width="25%" |'''Touma Route'''
| width="25%" |'''Kusuha Route'''
| width="25%" |'''Cobray Route'''
| width="25%" |'''Selena Route'''

|-
| class="fc-route1" |'''第３４話：武人の心、その意味 Scenario 34 - Why a Warrior Fights'''
| class="fc-route2" |'''第３４話：怒りの強念者 Scenario 34 - The Wrath of a Esper'''
| class="fc-route3" |'''第３４話：虚ろな魂の捕囚 Scenario 34 - Captivity of the Hollow Soul'''
| class="fc-route4" |'''第３４話：ベトレイヤー Scenario 34 - Betrayer'''

|-
|'''Victory Condition:'''
*1st Part: (1)(2) Defeat all enemies
*2nd Part: Bemidoban is defeated 
'''Defeat Condition:'''
*1st Part: (1) Ally battleship is defeated; (2) Ally battleship is defeated, Touma is defeated
*2nd Part: Touma is defeated
'''Skill Point:''' Defeat all enemies within 6 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Raioh (Touma)
*Mazinger Z, Great Mazinger and Getter Dragon gain the "F Dynamic Special" combination attack

|'''Victory Condition:'''(1)(2) Shin RyuOhKi is defeated; (3)(4) Bemidoban and Shmuel are defeated '''Defeat Condition:''' (1) Any ally is defeated; (2) Kusuha is defeated; (3) Kusuha is defeated, Ally battleship is defeated; (4) Ally battleship is defeated '''Skill Point:''' Destroy the Bemidoban (retreats (8000 (E) / 10000 (N) / 12000 (H)) HP) '''Secret Requirements:''' '''Unit Acquisition:'''
*Mazinger Z, Great Mazinger and Getter Dragon gain the "F Dynamic Special" combination attack
*Dygenguar (Sanger)
*Aussenseiter (Ratsel)

|'''Victory Condition:''' Shin RyuOhKi is defeated '''Defeat Condition:''' Ally battleship is defeated, Cobray, Arad, or Seolla are defeated '''Skill Point:''' Defeat Shin RyuOuKi within 6 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Werkbau (Cobray)
*Mazinger Z, Great Mazinger and Getter Dragon gain the "F Dynamic Special" combination attack

|'''Victory Condition:''' (1) Shmuel is defeated; (2)(3) Bemidoban defeated Shin RyuOhKi '''Defeat Condition:''' (1) Selena is defeated; (2) Ally battleship is defeated, Selena is defeated; (3) Ally battleship is defeated '''Skill Point:''' Bemidoban and Shin RyuOuKi shot down. Both flee when below (8000 (E) / 10000 (N) / 12000 (H)) HP. '''Secret Requirements:''' '''Unit Acquisition:'''
*Mazinger Z, Great Mazinger and Getter Dragon gain the "F Dynamic Special" combination attack
*Alterion (CF) (Ibis, Tsugumi)
*AS Soleares (Selena, Elma) is unavailable during the intermission

|-
| class="fc-route1" |'''第３５話：闘志、誰がために Scenario 35 - For Whom the Fighting Spirit Burns'''
| class="fc-route2" |'''第３５話：魂、久遠に Scenario 35 - The Soul, Into Eternity'''
| class="fc-route3" |'''第３５話：THE GUN OF DIS Scenario 35 - THE GUN OF DIS'''
| class="fc-route4" |'''第３５話：クロージング・ハート Scenario 35 - Closing Heart'''

|-
|'''Victory Condition:''' (1)(2) Defeat all enemies '''Defeat Condition:''' (1) Touma is defeated; (2) Ally battleship is defeated, Touma, Sanger, or Rastel are defeated '''Skill Point:''' Defeat all enemies within 4 turns of allied reinforcements arriving. '''Secret Requirements:''' '''Unit Acquisition:'''
*DaiRaioh(Touma)
*Dygenguar (Sanger)
*Aussenseiter (Ratsel)

|'''Victory Condition:''' (1)(2)(3) Shin RyuOhKi is defeated '''Defeat Condition:''' (1) Kusuha or Bullet are defeated; (2) Kusuha is defeated; (3) Ally battleship is defeated, Kusuha is defeated '''Skill Point:''' Destroy Shin RyuOhKi within 6 turns of Varuch Ben and Ishar's arrival, destroying them first. '''Secret Requirements:''' '''Unit Acquisition:'''
*GouRyu Kai (Kusuha)
*Raiko Kai (Bullet)
*Shin RyuKoOh (Kusuha, Bullet)
*Dygenguar (Sanger)
*Aussenseiter (Ratsel)

|'''Victory Condition:''' (1)(2) Bemidoban or Shmuel are defeated; (3) ??? is defeated; (4) Valk Baal is defeated '''Defeat Condition:''' (1) Cobray is defeated, (2)(3)(4) Ally battleship is defeated, Cobray is defeated '''Skill Point:''' Defeat the Bemidoban within 5 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Varuch Ben (Cobray)
*Dis Astranagant (Cobray)

|'''Victory Condition:''' (1)(2) Defeat all enemies '''Defeat Condition:''' (1) Selena is defeated; (2) Ally battleship is defeated '''Skill Point:''' Map cleared within 7 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Eslim (Selena)
*Alterion (CF) replaces Tsugumi with Slay as a Subpilot

|-
| colspan="4" class="fc-std-sc" |'''第３６話：激突！勇者VS勇者！ Scenario 36 - Clash! Brave vs. Brave!'''

|-
| colspan="4" |'''Victory Condition:'''
*1st Part: Defeat all enemies
*2nd Part: Ally battleship is defeated
'''Defeat Condition:'''
*1st Part: Star GaoGaiGar is defeated
*2nd Part: Gai is defeated
'''Skill Point:''' Defeat all enemies within 6 turns. '''Secret Requirements:'''
*EVA-01 F-Type Equipment
**Shinji must defeat Ramiel on the first part of this scenario.
*Early Nu Gundam HWS
**Amuro must have 60 or more kills by the end of the scenario.
*GP-02A
**Burning, Monsha, Bate, and Adel must have a combined killcount of 100 or more by the end of the scenario.
*Nuclear Bazooka
**Meet the requirements for GP-02A
*Black Getter
**Michiru must have 20 kills or more by the end of the scenario.
'''Unit Acquisition:'''
*Gundam GP02
*Megarider
*Re-GZ BWS
*MP Nu Gundam
*Black Getter
*VF-1S S Valkyrie (Fokker)
*VF-1S S Valkyrie (Hikaru)
*VF-1A S Valkyrie (Kakizaki)
*VF-1J S Valkyrie
*YF-19 (Isamu)
*YF-21 (Guld)
*Battle 7 (Max)
*VF-19 Kai Fire Valkyrie (Basara)
*VF-11 MAXL Kai (Mylene)
*VF-17 Kai Nightmare (Ray)
*VF-17S Nightmare (Gamlin)
*VF-17D Nightmare (Physica)
*VF-17D Nightmare (Docker
*Soloship (Bess, Hatari)
*Ideon (Cosmo, Kasha, Moera)

|-
| colspan="4" class="fc-std-sc" |'''第３７話：果て無き旅路の始まり Scenario 37 - The Beginning of an Unending Journey'''

|-
| colspan="4" |'''Victory Condition:''' (1) Defeat all enemies; (2)(3) Devariim is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated; (3) Ally battleship is defeated, Bundle, Cutnall, or Kernagul are defeated
'''Skill Point:''' All enemies destroyed within 6 turns, with Devariim being last. '''Secret Requirements:''' '''Unit Acquisition:'''
*Heavy Weapons System parts for Nu Gundam
*Evangelion Unit 0 Custom gains the "N2 Mine" MAP attack
*Evangelion Unit 1 gains the "Magoroku E Sword" attack
*Gunbuster (Noriko)
*Sizzler Black (Jung)
*Eltrium (Tashiro, Deputy Chief)
*Bundle Ship (Bundle)
*Cutnall Ship (Cutnall)
*Kernagul Ship (Kernagul)

|- class="fc-route-h"
| colspan="2" |'''Go with the Soloship''' Gundam (0083, Zeta, ZZ, CCA, Wing, SEED) Getter Robo Raideen Daitarn 3 Evangelion Ideon GaoGaiGar
| colspan="2" |'''Go with the Battle 7''' Mazinger (Z, Great) Macross (DYRL, 7, Plus) Steel Jeeg Combattler V Voltes V Gunbuster Daimos Gaiking Goshogun Dancouga Virtual On

|-
| colspan="2" class="fc-route1" |'''第３８話：運命の炎の中で Scenario 38 - Within the Fires of Destiny'''
| colspan="2" class="fc-route3" |'''第３８話：戦火は星の瞬きと Scenario 38 - The Fires of War Among the Twinkling Stars'''

|-
| colspan="2" |'''Victory Condition:'''
*1st Part: Enemy Battleship is defeated
*2nd Part: (1) Defeat all enemies; (2) Dalam's Ship is defeated
'''Defeat Condition:'''
*1st Part: Ally battleship is defeated, Ideon is defeated
*2nd Part: (1) Ally battleship is defeated; (2) Ally battleship is defeated, Cosmo is defeated
'''Skill Point:''' Clear the map within 7 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Ideon loses Moera as a subpilot
*Ideon gains the "Ideon Gun" attack

| colspan="2" |'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Defeat all enemies within 6 turns. '''Secret Requirements:''' '''Unit Acquisition:'''

|-
| colspan="2" class="fc-route1" |'''第３９話：果てに待つもの Scenario 39 - What Awaits at the End'''
| colspan="2" class="fc-route3" |'''第３９話：ただ母星のために Scenario 39 - All for the Motherworld'''

|-
| colspan="2" |'''Victory Condition:''' (1)(2)Gabro Zan is defeated '''Defeat Condition:''' (1) Ally battleship is defeated, Ryouma, Hayato, Benkei, or Michiru are defeated; (2) Ally battleship is defeated, Ryouma, Hayato, Benkei, or Cosmo are defeated '''Skill Point:''' Destroy all Buff Clan ships within 8 turns, saving Gabro Zan for last. '''Secret Requirements:''' '''Unit Acquisition:'''
* Ideon gains Gije as a subpilot
* Shin Getter-1 gains the "Shin Shine Spark" attack

| colspan="2" |'''Victory Condition:''' Heinel is defeated '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Within 7 turns, defeat all enemies, then defeat Heinel and Richter (Richter must be defeated before Heinel) '''Secret Requirements:''' '''Unit Acquisition:'''

*Goshogun gains the "GoFlasher Special" attack

|-
| colspan="2" class="fc-route1" |'''第４０話：勇者王、最後の刻！ Scenario 40 - The King of Brave’s Final Hour!'''
| colspan="2" class="fc-route3" |'''第４０話：勇気、果つる時… Scenario 40 - When Courage Fails...'''

|-
| colspan="2" |'''Victory Condition:'''
*1st Part: Defeat all enemies
*2nd Part: Ally battleship is defeated
'''Defeat Condition:'''
*1st Part: Defeat all enemies
*2nd Part: Gai is defeated
'''Skill Point:''' Defeat all enemies within 6 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*All GaoGaiGar units are lost

| colspan="2" |'''Victory Condition:''' (1)(2)(3) Defeat all enemies '''Defeat Condition:''' (1) Gai is defeated; (2) Ally battleship is defeated, Gai is defeated; (3) Ally battleship is defeated '''Skill Point:''' Defeat all enemies within 7 turns, with Palparepa Plus being the last one. '''Secret Requirements:''' '''Unit Acquisition:'''
*GaoFighGar (Gai)
*All GaoGaiGar units are lost

|-
| colspan="4" class="fc-std-sc" |'''第４１話：銀河が消滅する日 Scenario 41 - The Day the Galaxy is Extinguished'''

|-
| colspan="4" |'''Victory Condition:''' (1) Defeat all enemies; (2) GaoFighGar is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated, J is defeated '''Skill Point:''' GaoFighGar shot down by turn 7. '''Secret Requirements:'''
*Gije & Ganga Rube
**When given the option, choose to meet the opponent's challenge (first option).
'''Unit Acquisition:'''
*J-Ark (J, Tomoro)
|-
| colspan="4" class="fc-std-sc" |'''第４２話：超勇者黙示録 Scenario 42 - The Super Brave Apocalypse'''

|-
| colspan="4" |'''Victory Condition:'''
*1st Part: Defeat all enemies
*2nd Part: Genesis GaoGaiGar reaches the designated point in 4 turns
'''Defeat Condition:'''
*1st Part: Gai or J are defeated
*2nd Part: Ally battleship is defeated, Gai is defeated, 5th turn is reached
'''Skill Point:''' All enemies shot down by turn 7. '''Secret Requirements:'''
* J-Phoenix & Renais (Sub Pilot)
**Have J defeat Pia Decem on the first part of the stage. Defeat Pia Decem again to gain the attack.
'''Unit Acquisition:'''
* King J-der gains the "J-Phoenix" attack, and gains Renais as a sub-pilot
**Koryuu and Anryuu lose the "Renais Support Attack" attacks
*Genesic GaoGaiGar (Gai)
*J-Ark (J, Tomoro)
** Renais also is a sub-pilot if the conditions are met in the first part of the stage
*Goldymarg (Goldymarg)
*Big Volfogg (Volfogg)
*TenRyuJin (TenRyuJin)
*KoRyu (KoRyu)
*AnRyu (AnRyu)
*EnRyu (EnRyu)
*HyoRyu (HyoRyu)
*Mic Sounder XIII (Mic Sounder XIII)

|- class="fc-route-h"
|'''Touma Route'''
|'''Kusuha Route'''
|'''Cobray Route'''
|'''Selena Route'''

|-
| class="fc-route1" |'''第４３話：閉ざされた世界で Scenario 43 - In a Closed-Off World'''
| class="fc-route2" |'''第４３話：真の龍神 Scenario 43 - The True Dragon God'''
| class="fc-route3" |'''第４３話：人形たちの宴 Scenario 43 - The Doll’s Banquet'''
| class="fc-route4" |'''第４３話：サイレント・クライ Scenario 43 - Silent Cry'''

|-
|'''Victory Condition:'''
*1st Part: (1) Defeat all enemies; (2) Vaikran is defeated, Houle is defeated
*2nd Part: Baran is defeated
'''Defeat Condition:'''
*1st Part: (1) Ally battleship is defeated, Touma or Ryusei are defeated; (2) Ally battleship is defeated, Ryusei is defeated
*2nd Part: Touma is defeated
'''Skill Point:''' Defeat the Bemidoban within 5 turns. '''Secret Requirements:''' '''Unit Acquisition:'''

|'''Victory Condition:''' (1) Defeat Shin RyuOhKi; (2) Vaikran is defeated, Houle is defeated '''Defeat Condition:''' (1) Kusuha or Ryusei are defeated; (2) Ally battleship is defeated, Ryusei is defeated '''Skill Point:''' Defeat Shin RyuOhKi within 5 turns. '''Secret Requirements:''' '''Unit Acquisition:'''

|'''Victory Condition:'''
*1st Part: (1) Defeat all enemies; (2) Vaikran is defeated, Houle is defeated
*2nd Part: Valk Baal is defeated
'''Defeat Condition:'''
*1st Part: (1)(2) Ally battleship is defeated, Ryusei is defeated
*2nd Part: Cobray is defeated
'''Skill Point:''' Defeat the Bemidoban within 5 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Dis Astranagant (Cobray) is unavailable during the intermission

|'''Victory Condition:''' (1) Defeat all enemies; (2)(3) Vaikran is defeated, Houle is defeated'''Defeat Condition:''' (1)(2) Ally battleship is defeated, Selena, Ibis, or Ryusei are defeated (3) Ryusei is defeated'''Skill Point:''' Defeat the Bemidoban within 5 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*AS Alegrias (Selena, Elma?) Is unavailable until the next stage

|-
| class="fc-route1" |'''第４４話：闘志、未来のために Scenario 44 - Fighting Spirit, for the Future'''
| class="fc-route2" |'''第４４話：四神招魂、ここに Scenario 44 - The Four Gods Souls, Gather Here'''
| class="fc-route3" |'''第４４話：鋼の戦神 Scenario 44 - The Steel War God'''
| class="fc-route4" |'''第４４話：マイホーム・マイフレンズ Scenario 44 - My Home, My Friends'''

|-
|'''Victory Condition:'''
*1st Part: Vaikran is defeated
*2nd Part: (1)(2) Vaikran is defeated
'''Defeat Condition:'''
*1st Part: Ally battleship is defeated, Ryusei is defeated
*2nd Part: (1) Touma or Lyria are defeated; (2) Touma, Baran, or Lyria are defeated
'''Skill Point:''' Destroy the Vaikran within 5 turns. '''Secret Requirements:'''
*VF-19F Excaliburs
**Max must have a total of 60 or more kills by the end of the scenario, if you do not pick the Go to Varauta route.
*Gije & Ganga Rube
**You must pick the Go To Bozoan Route.
'''Unit Acquisition:'''
* DaiRaioh gains the "Jinrai" attack 
*Banpreios (Ryuusei, Rai, Mai)
*Dygenguar (Sanger)
*Aussenseiter (Ratsel)
*Shumel (Lyria)
*Bemidoban (Baran)

|'''Victory Condition:'''
*1st Part: Vaikran is defeated
*2nd Part: (1)(2) Vaikran is defeated
'''Defeat Condition:'''
*1st Part: Kusuha or Ryusei are defeated
*2nd Part: (1) Ally battleship is defeated, Kusuha is defeated; (2) Kusuha, Bullet, or Lyria are defeated
'''Skill Point:''' Destroy the Vaikran within 5 turns. '''Secret Requirements:'''
*VF-19F Excaliburs
**Max must have a total of 60 or more kills by the end of the scenario, if you do not pick the Go to Varauta route.
*Gije & Ganga Rube
**You must pick the Go To Bozoan Route.
'''Unit Acquisition:'''
*Banpreios (Ryuusei, Rai, Mai)
*Dygenguar (Sanger)
*Aussenseiter (Ratsel)
*Shumel (Lyria)
*Shin RyuKoOh can now transform into Shin KoRyuOh

|'''Victory Condition:'''
*1st Part: (1) Defeat all enemies; (2) Vaikran is defeated
*2nd Part: Defeat all enemies
'''Defeat Condition:'''
*1st Part: (1)(2) Ally battleship is defeated, Ryusei, Arad or Seola are defeated
*2nd Part: Ally battleship is defeated, Cobray or Lyria are defeated
'''Skill Point:''' Destroy the Vaikran within 3 turns of its arrival. '''Secret Requirements:'''
*VF-19F Excaliburs
**Max must have a total of 60 or more kills by the end of the scenario, if you do not pick the Go to Varauta route.
*Gije & Ganga Rube
**You must pick the Go To Bozoan Route.
'''Unit Acquisition:'''
*Dis Astranagant (Cobray)
*Banpreios (Ryuusei, Rai, Mai)
*Dygenguar (Sanger)
*Aussenseiter (Ratsel)
*Shumel (Lyria)

|'''Victory Condition:'''
*1st Part: (1) Valk Isher is defeated; (2) Vaikran is defeated
*2nd Part: (1)(2) Vaikran is defeated
'''Defeat Condition:'''
*1st Part: (1)(2) Ally battleship is defeated, Ryusei or Ibis are defeated
*2nd Part: (1) Ally battleship is defeated, Selena, Ibis, or Lyria are defeated; (2) Selena or Lyria are defeated
'''Skill Point:''' Destroy the Vaikran within 3 turns of its arrival. '''Secret Requirements:'''
*VF-19F Excaliburs
**Max must have a total of 60 or more kills by the end of the scenario, if you do not pick the Go to Varauta route.
*Gije & Ganga Rube
**You must pick the Go To Bozoan Route.
'''Unit Acquisition:'''
*Banpreios (Ryuusei, Rai, Mai)
*Dygenguar (Sanger)
*Aussenseiter (Ratsel)
*Shumel (Lyria)
*Alterion (CF) replaces Slay with Tsugumi as a subpilot
*Vegalion (Slay)
**Alterion (CF) and Vegalion can combine into Hyperion

|}
 

==Stages 45 - 48==
{| width="100%"
|- class="fc-route-h"
| colspan="2" |'''Go to Earth'''
| colspan="2" |'''Go to Space'''

|- class="fc-route-h"
| width="25%" |'''Search for Irui''' Mazinger (Z, Great) Getter Robo Kotetsu Jeeg Gaiking Dancouga
| width="25%" |'''Fight against ZAFT''' Gundam (0083, Z, ZZ, CCA) Gundam Wing Gundam SEED Evangelion
| width="25%" |'''Go to Varauta''' Macross (DYRL, 7, Plus) GoShogun Daitarn 3 Gunbuster
| width="25%" |'''Go to Boazan''' Ideon Combattler V Voltes V Daimos Raideen GaoGaiGar Virtual On

|-
| class="fc-route1" |'''第４５話：とらわれの心、叫ぶ時 Scenario 45 - When the Captive Heart Cries Out'''
| class="fc-route2" |'''第４５話：忍び寄る終焉 Scenario 45 - Creeping Death'''
| class="fc-route3" |'''第４５話：悪夢の突入作戦 Scenario 45 - Charging into a Nightmare'''
| class="fc-route4" |'''第４５話：もう一つの母星ボアザン Scenario 45 - Another Mother Planet - Boazan'''

|-
|'''Victory Condition:''' (1) Defeat all enemies: (2) Legion is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated '''Skill Point:''' Defeat all enemies within 7 turns '''Secret Requirements:'''
'''Unit Acquisition:'''

|'''Victory Condition:''' (1) Defeat all enemies; (2) All Angels are defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated, Shinji, Asuka, or Rei are defeated '''Skill Point:''' Defeat all enemies within 5 turns. '''Secret Requirements:'''
*Early Nu Gundam HWS
**If you did not receive it on Scenario 37, Amuro must have 60 or more kills by the end of the scenario.
*EVA-01 F-Type Equipment(optional)
**Shinji must defeat Armisael.
*Neue Ziel
**Kou must have 40 or more kills than Keith by the end of the scenario.
*Val Varo
**Keith must have 20 or more kills than Kou by the end of the scenario.
*Gerbera Tetra
**Kou and Keith's killcounts must be within 6 of one another by the end of the scenario.
*Quin Mantha
**The sum of Ple and Ple 2's killcounts must be a number ending in 5 at the end of the scenario.
*Haman's Qubeley
**The sum of Ple and Ple 2's killcounts must be a number ending in 0 at the end of the scenario.
*MP Qubeleys
**The sum of Ple and Ple 2's killcounts must be a number ending in 7 at the end of the scenario.
*Doven Wolf
**The sum of Beecha and Mondo's killcounts must be a number ending in 0 at the end of the scenario.
*Geymalk
**The sum of Beecha and Mondo's killcounts must be a number ending in 5 at the end of the scenario.
*Strike Rouge IWSP
**The sum of Cagalli, Julie, Mayura, and Asagi's killcounts must be 100 or more by the end of the scenario.
*Early Full Armor ZZ Gundam
**Judau, Mondo, Beecha, Elle, Roux, and Iino's combined killcounts must be greater than 115 by the end of this scenario.
'''Unit Acquisition:'''
*Neue Ziel OR Val Varo OR Gerbera Tetra
*Quin Mantha OR Haman's Qubeley OR Mass Production Qubeley (x2)
*Doven Wolf OR Geymalk
*Strike Rougue IWSP
*Heavy Weapon System for Nu Gundam
*Full Armor Parts for ZZ Gundam
*Evangelion Unit 2 gains the "A.T. Field" attack
*Evangelion Unit 0 Custom gains the "Lance of Longinus" attack

|'''Victory Condition:'''
*1st Part: All allies reach the designated point, aside Battle 7
*2nd Part: Any ally reaches the designated point
'''Defeat Condition:'''
*1st Part: Any ally is defeated
*2nd Part: Any ally is defeated
'''Skill Point:''' Defeat all enemies before moving a unit to the target area. '''Secret Requirements:'''
'''Unit Acquisition:'''
*The following all gain the "Large Anti-Ship Reaction Missile" attack
**VF-1S S Valkyrie (Focker), VF-1S S Valkyrie (Hikaru), VF-1A S Valkyrie (Kakizaki)
**VF-17S Nightmare (Gamlin), VF-17D Nightmare (Docker), VF-17D Nightmare (Physica)
**YF-19 (Isamu), YF-21 (Guld)

|'''Victory Condition:''' Zartan is defeated '''Defeat Condition:''' Any ally is defeated '''Skill Point:''' Destroy all other enemies before destroying Zaltan. '''Secret Requirements:'''
'''Unit Acquisition:'''
*Voltes V is unavailable during the intermission
*Daimos is unavailable during the intermission

|-
| class="fc-route1" |'''第４６話：さらば父よ、戦士達の旅立ち Scenario 46 - Farewell, Father! The Warriors Depart'''
| class="fc-route2" |'''第４６話：永遠を信じて Scenario 46 - Believe in Eternity'''
| class="fc-route3" |'''第４６話：野望の第４惑星 Scenario 46 - The Fourth Planet of Ambition'''
| class="fc-route4" |'''第４６話：崩れゆく邪悪の塔 Scenario 46 - The Collapsing Tower of Evil'''

|-
|'''Victory Condition:''' (1) Steel Jeeg persuades Flora; (2) Defeat Yamata no Orochi, Demonica, and the Dragon Ship; (3) '''Defeat Condition:''' (1) Flora is defeated, Ally battleship is defeated, Kouji, Tetsuya, or Steel Jeeg are defeated; (2) Yamata no Orochi reaches the designated point, Ally battleship is defeated, Kouji, Tetsuya or Steel Jeeg are defeated '''Skill Point:''' Destroy Ryuuma and the Grand Marshall of Hell within 8 turns. '''Secret Requirements:'''
*Minmei's Disc
**Move Boss's squad onto either 'Hut' tile on the beach, and you will pick up the item
'''Unit Acquisition:'''
*Mazinkaizer gains the "Kaizer Nova" attack and Flight (S Rank in Air)

|'''Victory Condition:''' (1)(2) Defeat all enemies; (3) The Dominion withdraws '''Defeat Condition:''' (1) Any ally is defeated; (2)(3) Ally battleship is defeated, Kira or Athrun are defeated '''Skill Point:''' Destroy the Dominion (retreats at (10000HP (E) / 15000HP (N)/20000HP (H)) '''Secret Requirements:''' '''Unit Acquisition:'''
*Eternal (Lacus, Andrew)
*BuCUE
*METEOR parts for Freedom Gundam
*METEOR parts for Justice Gundam
*LaGOWE

|'''Victory Condition:''' (1) Guide all enemies east past the designated line; (2) All allies reach the escape point '''Defeat Condition:''' (1) Any ally is defeated, Any enemy is defeated; (2) Any ally is defeated '''Skill Point:''' Clear the map by defeating all enemies within 8 turns of the victory condition change '''Secret Requirements:'''
*VF-19F Excaliburs
**Max must get 15 or more kills on this scenario.
'''Unit Acquisition:'''
*VF-22S Sturmvogel II (Max)
*FBz-99G Zaubergeran (Gamlin)
*VF-19 Kai Fire Valkyrie gains the song "TRY AGAIN"
**VF-19 Kai Fire Valkyrie, VF-11 MAXL Kai, and VF-17 Kai Nightmare gain the "TRY AGAIN" (MAP) and (ALL) combination attack

|'''Victory Condition:''' (1) None; (2) Warchimedes is defeated; (3) Janera is defeated '''Defeat Condition:''' (1) Any friendly unit is defeated, Voltes V or Daimos are defeated; (2)(3) Ally battleship is defeated, Hyouma, Ken'ichi, Kazuya, or Heinel are defeated '''Skill Point:''' Destroy all enemies and finish the stage within 10 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Combattler V, Voltes V, and Daimos gain the "Choudenji SeiKenZuki" combination attack

|-
| class="fc-route1" |'''第４７話：神になろうとした男 Scenario 47 - The Man Who Tried to Become a God'''
| class="fc-route2" |'''第４７話：ヒトの見た夢 Scenario 47 - The Dream People Saw'''
| class="fc-route3" |'''第４７話：大宇宙の意志 Scenario 47 - The Will of the Universe'''
| class="fc-route4" |'''第４７話：因果の海で Scenario 47 - In the Sea of Causality'''

|-
|'''Victory Condition:''' (1) Defeat all enemies; (2) Shapiro is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated '''Skill Point:''' Destroy Shapiro within 6 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Gaiking and Daiku Maryuu gain the "Giant Cutter Upside-down Slash" combination attack

|'''Victory Condition:''' (1)(2)(3) Defeat all enemies; '''Defeat Condition:''' (1) Ally battleship is defeated, Kira, Mwu, or Dearka are defeated; (2) Kira is defeated; (3) The Vesalius is defeated '''Skill Point:''' Orga, Clotho and Shani shot down before Fllay reaches the Dominion. '''Secret Requirements:''' '''Unit Acquisition:'''

|'''Victory Condition:''' (1)(2)(3) Defeat all enemies '''Defeat Condition:''' (1) Any ally is defeated; (2) Ally battleship is defeated, Bundle is defeated; (3) Ally battleship is defeated, Bundle, Gamlin, or Mylene are defeated '''Skill Point:''' Destroy all SMTC units within 5 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*VF-19S Excalibur (before deployment)
*VF-19F Excalibur (x2) (before deployment)
*Bundle's Ship (Bundle, Cutnal, Kernagul)

|'''Victory Condition:'''
*1st and 2nd Part: Defeat all enemies within (5 (E) / 4 (N) / 3 (H)) turns
*3rd and 4th Part: Defeat all enemies within (4 (E) / 3 (N) / 2 (H)) turns
*5th Part: Defeat all enemies within (8 (E) / 7 (N) / 6 (H)) turns
'''Defeat Condition:'''
*1st and 2nd Part: Ally battleship is defeated, Turn (6 (E) / 5 (N) / 4 (H)) is reached
*3rd and 4th Part: Ally battleship is defeated, Turn (5 (E) / 4 (N) / 3 (H)) is reached
*5th Part: Ally battleship is defeated, Turn (9 (E) / 8 (N) / 7 (H)) is reached
'''Skill Point:''' During the 5th Part: Shoot down the two Gataman Zans before the Gabro Zan '''Secret Requirements:''' '''Unit Acquisition:'''

|-
| colspan="2" class="fc-route1" |'''第４８話：失われた者たちへの鎮魂歌 Scenario 48 - Requiem for the Lost'''
| colspan="2" class="fc-route4" |'''第４８話：銀河に死す Scenario 48 - To Die in the Galaxy'''

|-
| colspan="2" |'''Victory Condition:''' (1) Deathgaia, Gildrome, and Helmut are defeated; (2) Mute Zalbados is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated '''Skill Point:''' Defeat all enemies within 6 turns after Muge Zalbados appears, then defeat Muge Zalbados '''Secret Requirements:'''
*Early Nu Gundam HWS
**If you did not receive it on Scenario 37 or 45, Amuro must have 60 or more kills by the end of the scenario.
'''Unit Acquisition:'''

| colspan="2" |'''Victory Condition:''' (1) Defeat all enemies; (2) Gollum or Zomd are defeated; (3) Defeat all enemies; (4) Gabro Zan is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated, Basara is defeated; (3)(4) Ally battleship is defeated, Ideon is defeated '''Skill Point:''' Destroy GaviGla (retreats at 8000HP (E) / 10000HP (N) / 12000HP (H)) '''Secret Requirements:'''
*Early Nu Gundam HWS
**If you did not receive it on Scenario 37 or 45, Amuro must have 60 or more kills by the end of the scenario.
*Gije & Ganga Rube
**The Ide Gauge must reach level 5 during this scenario.
'''Unit Acquisition:'''
*Ideon replaces Gije with Dek as a Subpilot
*Battle 7 gains the "Large Anti-Ship Reaction Missile" attack
*VF-19 Kai Fire Valkyrie (Basara) is unavailable during the intermission

|}
 

==Stages 49 - 58==
{| width="100%"
|-
| colspan="3" class="fc-std-sc" |'''第４９話：銀河に響く歌声 Scenario 49 - Songs Resounding Through the Galaxy'''

|-
| colspan="3" |'''Victory Condition:'''
*1st Part: Defeat all enemies, In 5 turns Battle 7 reaches the designated point
*2nd Part: (1) In 6 turns, Battle 7 reaches the designated point; (2)(3)(4) Gepelnitch is defeated
'''Defeat Condition:'''
*1st Part: Ally battleship is defeated, Battle 7 doesn't reach the designated point by turn 6
*2nd Part: (1) Ally battleship is defeated, Mylene or Ray are defeated, Battle 7 doesn't reach the designated point by turn 7; (2) Ally battleship is defeated, Ray is defeated; (3) Ally battleship is defeated, Basara, Mylene, or Ray are defeated; (4) Ally battleship is defeated, Basara, Mylene, Ray, or Sybil are defeated
'''Skill Point:''' GaviGla is defeated (in the 1st part) '''Secret Requirements:'''
*Gavil and FBz-99G Zaubergeran
**If Gamlin has over 50 kills, Gamlin must defeat GaviGla during the first half of the scenario. During the second half of the scenario, do not defeat Gavil.
'''Unit Acquisition:'''
*VF-22S Sturmvogel II (Max)
*VF-22S Sturmvogel II (Milia)
*Sybil (Sybil)
**VF-19 Kai Fire Valkyrie, VF-11 MAXL Kai, and VF-17 Kai Nightmare, and Sybil gain the "TRY AGAIN" combination attack
*FBz-99G Zaubergeran (Gavil)

|-
| colspan="3" class="fc-std-sc" |'''第５０話：二つの門と二つの星 Scenario 50 - Two Gates, Two Stars'''

|-
| colspan="3" |'''Victory Condition:''' (1) Hermodr Echad is defeated; (2) Zfield is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated '''Skill Point:''' Destroy the Hermodr Echad within 5 turns. '''Secret Requirements:'''
*Duel Gundam & Yzak
**Dearka's killcount must be 50 or more by the end of the scenario.
'''Unit Acquisition:'''

|-
| colspan="3" class="fc-std-sc" |'''第５１話：終わらない明日へ Scenario 51 - To an Unending Tomorrow'''

|-
| colspan="3" |'''Victory Condition:'''
*1st Part: (1) Destroy all nuclear missiles; (2) Dominion is defeated & Athrun reaches the designated point
*2nd Part: Destroy the Genesis reactor within 4 turns
'''Defeat Condition:'''
*1st Part: (1) Any missile reaches the end of the map, Ally battleship is defeated, Kira, Athrun or Cagalli are defeated; (2) Ally battleship is defeated, Kira, Athrun or Cagalli are defeated
*2nd Part: Kira is defeated, reach the 5th turn
'''Skill Point:''' Destroy the Providence Gundam (in the 2nd part) '''Secret Requirements:'''
*Duel Gundam & Yzak
**During the first half of the scenario, destroy all of the nukes, then have Dearka battle with Yzak
**Both must survive the first half of the scenario
'''Unit Acquisition:'''
*Lacus unlocks the SEED pilot skill
*Duel Gundam (Yzak)

|-
| colspan="3" class="fc-std-sc" |'''第５２話：世界の中心でアイを叫んだもの Scenario 52 - The One Who Cried "Love" at the Heart of the World'''

|-
| colspan="3" |'''Victory Condition:'''
*1st Part: (1)(2)(3) Defeat all enemies (4)(5) EVA Unit 1 is defeated
*2nd Part: EVA Unit 1 is defeated
'''Defeat Condition:'''
*1st Part: (1) Any ally is defeated; (2) Shinji is defeated; (3)(4) Ally battleship is defeated; (5) Ally battleship is defeated, Reach the 6th turn after the "Cross" grows from the Earth
*2nd Part: Shinji is defeated
'''Skill Point:''' Asuka survives for 2 full turns. '''Secret Requirements:'''
*Neue Ziel
**Kou must have 40 or more kills than Keith by the end of the scenario.
*Val Varo
**Keith must have 20 or more kills than Kou by the end of the scenario.
*Gerbera Tetra
**Kou and Keith's killcounts must be within 6 of one another by the end of the scenario.
*Quin Mantha
**The sum of Ple and Ple 2's killcounts must be a number ending in 5 at the end of the scenario.
*Haman's Qubeley
**The sum of Ple and Ple 2's killcounts must be a number ending in 0 at the end of the scenario.
*MP Qubeleys
**The sum of Ple and Ple 2's killcounts must be a number ending in 7 at the end of the scenario.
*Doven Wolf
**The sum of Beecha and Mondo's killcounts must be a number ending in 0 at the end of the scenario.
*Geymalk
**The sum of Beecha and Mondo's killcounts must be a number ending in 5 at the end of the scenario.
*EVA-01 F-Type Equipment
**Shinji must defeat Zeruel on the first part of this scenario.
**Shinji must defeat EVA-01 on the second part of this scenario.
**The sum of Shinji, Asuka, and Rei's killcounts must be 250 or more, or 150 or more if you met the requirement on scenario 45.
*Hi-Nu Gundam
**Amuro and Bright's combined killcounts must be greater than 120 by the end of this scenario.
*Sazabi
**Amuro and Kamille's killcount must be 50 or more each at the end of this scenario. You will receive it at the start of next scenario.
*Strike Rouge IWSP
**If you did not receive it on Scenario 45, the sum of Cagalli, Julie, Mayura, and Asagi's killcounts must be 100 or more by the end of the scenario.
*Destroid Monster
**If you did not receive it on Scenario 31, the sum of Fokker, Hikaru, and Kakizaki's killcounts must be 100 or more by the end of this scenario.
'''Unit Acquisition:'''
*Evangelion Unit 0 (Kaowru)
*Evangelion Unit 0 loses the "Lance of Longinus" attack

|-
| colspan="3" class="fc-prologue" |'''Beyond this point, losing Ideon results in a Game Over'''
|-
| colspan="3" class="fc-std-sc" |'''第５３話：出航！銀河殴り込み艦隊！ Scenario 53 - The Galactic Assault Fleet Takes Sail!'''

|-
| colspan="3" |'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' 230 enemy units shot down by turn 7. '''Secret Requirements:''' '''Unit Acquisition:'''
*All secret units and parts are given after the stage begins <ul><li>Neue Ziel OR Val Varo OR Gerbera Tetra</li><li>Quin Mantha OR Haman's Qubeley OR Mass Production Qubeley (x2)</li><li>Doven Wolf OR Geymalk</li><li>Strike Rougue IWSP</li><li>Hi-Nu Gundam</li><li>Sazabi</li><li>Destroid Monster</li><li>F-Type Equipment for Evangelion Unit 1</li><li>Atomic Bazooka parts for GP-02</li><li>Heavy Weapon System for Nu Gundam</li><li>Full Armor Parts for ZZ Gundam</li></ul>
*MP Nu Gundam
**Fin Funnel parts for MP Nu Gundam
*Gunbuster adds Kazumi as a Subpilot
**Gunbuster gains the "Super Inazuma Kick" attack
*Ra Cailum gains the "Nuclear Missile" MAP and ALL attacks

|-
| colspan="3" class="fc-std-sc" |'''第５４話：神に守られし星 Scenario 54 - The Planet Guarded by the Gods'''

|-
| colspan="3" |'''Victory Condition:'''
*1st Part: (1) Defeat all enemies; (2) The SRX Team rescues [https://akurasu.net/wiki/Super_Robot_Wars/Alpha_3/Info_Dump#Finding_Aya_on_Scenario_54 Aya]; (3) Jumora is defeated
*2nd Part: Bemidoban is defeated
'''Defeat Condition:'''
*1st Part: (1)(2) Ally battleship is defeated, Ryusei or Viletta are defeated; (3) Ally battleship is defeated, Ryusei, Viletta, Baran, or Lyria are defeated
*2nd Part: Sanger is defeated
**2nd Part (Touma Route): Touma is defeated
'''Skill Point:''' Clear the map within 10 turns, with both Hermoz defeated '''Secret Requirements:''' '''Unit Acquisition:'''
*Banpreios adds Aya as a Subpilot
**Branpreios gains the "Tenjou Tenge Nendou Musou-ken" attack
**Branpreios and R-GUN Powered gain the "Tenjou Tenge Ichigeki Hissatsu-ho" combination attack
*Shumel (Lyria)
*Bemidoban (Baran)

|-
| colspan="3" class="fc-std-sc" |'''第５５話：まつろわぬ神 Scenario 55 - The God Who Resists Order'''

|-
| colspan="3" |'''Victory Condition:'''
*1st Part: (1) Defeat all enemies; (2) Defeat Gebel GanEden
*2nd Part: (1) Defeat all enemies; (2) Defeat Gebel GanEden
'''Defeat Condition:'''
*1st Part: (1)(2) Ally battleship is defeated
*2nd Part: (1)(2) Ally battleship is defeated
'''Skill Point:''' Within 6 turns, defeat both Zfiruds '''Secret Requirements:''' '''Unit Acquisition:'''

|-
| colspan="3" class="fc-std-sc" |'''第５６話：終わりなき総力戦 Scenario 56 - Unending Total War'''

|-
| colspan="3" |'''Victory Condition:'''
*1st Part: Drowa Zan is defeated within 5 turns
*2nd Part: (1) Soloship move next to the Bairal Jinn; (2) Any unit reaches the designated point
'''Defeat Condition:'''
*1st Part: Ally battleship is defeated, 6th turn is reached
*2nd Part: (1)(2) Ally battleship is defeated
'''Skill Point:''' Clear the map within 7 turns. '''Secret Requirements:'''
*Gije & Ganga Rube
**You must pick the Fight The Buff Clan option at the end of the scenario.
*Bad Ending Route
**On New Game+, choose to fight (first option)
'''Unit Acquisition:'''

|- class="fc-route-h"
| width="40%" |'''Fight The Buff Clan''' Ideon, Getter Robo Combattler V, Voltes V, Daimos Daitarn 3 Gundam (0083, Zeta, ZZ, CCA, Wing, SEED)
| width="40%" |'''Fight The STMC''' Mazinger (Z, Great), Steel Jeeg, Raiden Goshogun, Dancouga, Gaiking Macross (DYRL, Plus, 7) Gunbuster, Evangelion, GaoGaiGar Virtual On
| width="20%" |'''Bad Ending '''

|-
| class="fc-route1" |'''第５７話：憎しみの環の中で Scenario 57 - In a Circle of Hatred'''
| class="fc-route3" |'''第５７話：終わりの始まり Scenario 57 - The Beginning of the End'''
| class="fc-prologue" |'''イデ発動ルート最終話：銀河に君と''' '''Ide Activation Final Scenario - With You In The Galaxy'''

|-
|'''Victory Condition:'''
*1st Part: (1) Defeat all enemies; (2) Soloship reaches the designated point
*2nd Part: Defeat all enemies within (11 (E) / 9 (N) / 7 (H)) turns
'''Defeat Condition:'''
*1st Part: (1)(2) All allies are defeated
*2nd Part: Turn (12 (E) / 10 (N) / 8 (H)) is reached, Ally battleship is defeated
'''Skill Point:''' Defeat all enemies within (10 (E) / 8 (N) / 6 (H)) turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Ganga Rube (Gije)

|'''Victory Condition:''' (1)(2) Defeat all enemies '''Defeat Condition:''' (1) Eltrium is defeated; (2) Ally battleship is defeated '''Skill Point:''' Defeat all enemies within 7 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Eltrium (Tashiro, Deputy Chief)

| rowspan="4" |'''Victory Condition:''' Bairal Jinn is defeated '''Defeat Condition:''' Ally battleship is defeated '''Secret Requirements:''' '''Unit Acquisition:'''

|-
| class="fc-route1" |'''第５８話：発動 Scenario 58 - Activation'''
| class="fc-route3" |'''第５８話：死闘、未来を懸けて Scenario 58 - The Mortal Struggle for the Future'''

|-
|'''Victory Condition:'''
*1st Part: Bairal Jinn is defeated
*2nd Part: Bairal Jinn is defeated
'''Defeat Condition:'''
*1st Part: Ally battleship is defeated
*2nd Part: Ally battleship is defeated
'''Skill Point:''' Destroy the Bairal Jinn within six turns. '''Secret Requirements:''' '''Unit Acquisition:'''

|'''Victory Condition:''' (1)(2) Defeat all enemies '''Defeat Condition:''' (1) Ally battleship is defeated; Drowa Zan is defeated, Ally battleship is defeated(2) '''Skill Point:''' All Buff Clan units survive the stage. '''Secret Requirements:''' '''Unit Acquisition:'''

|}
 

==Stages 59 - END==
{| width="100%"
|-
| colspan="2" class="fc-std-sc" |'''第５９話：果てしなき流れの果てに Scenario 59 - At the End of the Unending Flow'''

|-
| colspan="2" |'''Victory Condition:'''
*1st Part: Reach the 11th turn
*2nd Part: Defeat all enemies, 6th turn is reached
'''Defeat Condition:'''
*1st Part: Ally battleship is defeated, Any enemy enters the designated area
*2nd Part: Any enemy enters the designated area, Ally battleship is defeated, Noriko or Jung are defeated
'''Skill Point:''' Defeat all enemies within 5 turns. '''Secret Requirements:''' '''Unit Acquisition:'''

|- class="fc-route-h"
| width="50%" |'''Normal Ending - 56 Skill Points or less, OR turn count 421 or more'''
| width="50%" |'''Good Ending - 57 Skill Points or more AND turn count 420 or less'''

|-
| class="fc-route1" |'''最終話: 終焉の銀河 Final Scenario - A Galaxy of Death'''
| class="fc-route3" |'''最終話: 今遥か遠い彼方… Final Scenario - Now, The Faraway Yonder'''

|-
|'''Victory Condition:''' (1) ??? is destroyed; (2) Kaiser Ephres is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated '''Secret Requirements:''' '''Unit Acquisition:'''

|'''Victory Condition:''' (1) ??? is destroyed; (2)(3) Kaiser Ephres is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated; (3) Irui is defeated '''Secret Requirements:''' '''Unit Acquisition:'''
*Nashim Gan Eden (Irui)

|}

Super Robot Wars/Alpha 3/Flow Chart

2023-06-09T13:25:27Z

KomodoWork: /* Stages 34 - 44 */

Units and Pilots in Black join your team. 
Units and Pilots in Orange are available for that stage, then leave. 
Units and Pilots in Blue have special requirements. Check the [[../Secrets|Secrets]] page for more details. 
Units and Pilots in Red previously joined, but from this point, are rendered unusable. Those lost permanently are marked so, while others rejoin later on. 
Information in Green are upgrades for units already in your party.

==Stages 01 - 18==
{| width="100%"
|- class="fc-route-h"
| width="25%" |'''Touma Route'''
| width="25%" |'''Kusuha Route'''
| width="25%" |'''Cobray Route'''
| width="25%" |'''Selena Route'''

|-
| class="fc-route1" |'''第１話：闘志、炎に燃ゆる Scenario 1 - Within the Flames, Fighting Spirit Rises'''
| class="fc-route2" |'''第１話：出撃！鋼の龍虎 Scenario 1 - Launch! Dragon and Tiger of Steel'''
| class="fc-route3" |'''第１話：虚空からの転生 Scenario 1 - Reincarnated from the Void'''
| class="fc-route4" |'''第１話：シークレット・ミッション Scenario 1 - Secret Mission'''

|-
|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Any allied unit is defeated '''Skill Point:''' Defeat all enemies in 3 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Raioh (Touma)
*GaoGaiGar (Guy)
*Goldymarg (Goldymarg)
*HyoRyu (HyoRyu)
*EnRyu (EnRyu)

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Any allied unit is defeated '''Skill Point:''' Defeat all enemies in 2 turns '''Secret Requirements:'''
*Bullet
**You must be playing as Kusuha to recruit Bullet.
'''Unit Acquisition:'''
*Gouryu Kai (Kusuha)
*Raikou Kai (Bullet)
*Mazinkaiser (Kouji)
*Diana A (Sayaka)
*Shin Getter (Ryoma, Hayato, Benkei)
*Lady Command (Michiru)

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' (1) Werkbau is defeated; (2) Werkbau is defeated, ally battleship is defeated '''Skill Point:''' Defeat all enemies in 5 turns after enemy reinforcements show up '''Secret Requirements:'''
*Arado and Seolla
**You must be playing as Cobray to recruit Arado and Seolla.
'''Unit Acquisition:'''
*Werkbau (Cobray)
*Nu Gundam (Amuro)
*Ra Cailum (Bright, Torres)
*MP Nu Gundam (Kayra)
*Jegan (Katz)
*Incom & Funnel parts for MP Nu Gundam

|'''Victory Condition:''' (1) All enemies except Salamis Kai shot down; (2) R-Gun Powered shot down '''Defeat Condition:''' (1) Selena shot down, Salamis Kai shot down; (2) Selena shot down '''Skill Point:''' Defeat all enemies except the Salamis Kai in 4 turns '''Secret Requirements:'''
*Ibis and Slay
**You must be playing as Selena to recruit Ibis and Slay.
'''Unit Acquisition:'''
*AS Soleares (Selena, Elma)
*Albion (Synapse, Paserov)
*GP03 Dendrobium (Kou)
*GM Cannon II (Keith)
*GM Custom (Burning)
*GM Custom (Bate)
*GM Custom (Monsha)
*GM Cannon II (Adel)
*Zeta Gundam (Kamille)
*Re-GZ BWS (Four)
*Methuss (Fa)
*Super Gundam (Emma)
*Armed Fortress Orchis parts for Gundam Stamen
*G Defensor parts for Gundam Mk-II

|-
| class="fc-route1" |'''第２話: さらばGGG、さらば勇者 Scenario 2 - Farewell, GGG! Farewell, Braves!'''
| class="fc-route2" |'''第２話: 新たなる侵略者！立ち上がれV Scenario 2 - New Invaders! Rise Up, V!'''
| class="fc-route3" |'''第２話: 血の狼煙 Scenario 2 - Beacon Fire of Blood'''
| class="fc-route4" |'''第２話: フラッシュ・デイ Scenario 2 - Flash Day'''

|-
|'''Victory Condition:''' Defeat all enemies; Defeat ZX-01 '''Defeat Condition:''' Any allied unit is defeated '''Skill Point:''' Defeat the 4 Zonders in 2 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*GaoGaiGar (Guy)
*J-Der (J, Tomoro)
*Great Mazinger (Tetsuya)
*Venus A (Jun)
*Boss Borot (Boss, Nuke, Mucha)
*Kotetsu Jeeg (Jeeg)
*Big Shooter (Miwa)

|'''Victory Condition:''' (1) Defeat all enemies, (2) Defeat Dangel '''Defeat Condition:''' (1) Hyouma defeated (2) Any Allied Unit is defeated '''Skill Point:''' Defeat all enemies in 3 turns, do not lose any Federation Army squads '''Secret Requirements:''' '''Unit Acquisition:'''
*Combattler V (Hyoma, Juzo, Daisaku, Chizuru, Kosuke)
*Jegan (Federation Soldier) x 3

|'''Victory Condition:''' (1) Defeat the Magellan Kai-class Battleship (2) Defeat the Magellan Kai-class Battleship and Nuclear Missiles '''Defeat Condition:''' (1) Any ally unit is defeated (2) Nuclear Missiles reach the marked area on the map '''Skill Point:''' Defeat the enemy missiles and battleship in 7 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Clop-class (Federation Captain)
*Wildfalken (Seolla)
*MP Nu Gundam (Cobray)
*ZZ Gundam (Judau)
*Re-GZ BWS (Roux)
*Albion (Synapse, Paserov)
*GP03 Dendrobium (Kou)
*GM Cannon II (Keith)
*GM Custom (Burning)
*GM Custom (Bate)
*GM Custom (Monsha)
*GM Cannon II (Adel)
*Zeta Gundam (Kamille)
*Re-GZ BWS (Four)
*Methuss (Fa)
*Super Gundam (Emma)
*Armed Fortress Orchis parts for Gundam Stamen
*G Defensor Parts for Gundam Mk-II

|'''Victory Condition:''' Defeat any enemy battleship '''Defeat Condition:''' (1) Allied battleship is defeated; (2) Allied battleship is defeated, Selena is defeated '''Skill Point:''' Defeat the enemy battleship in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*ZZ Gundam (Judau)
*Re-GZ BWS (Roux)
*Nu Gundam (Amuro)
*Ra Cailum (Bright)
*Jegan (Katz)
*MP Nu Gundam (Keyra)
*AS Soleares (Selena, Elma)
*Incom & Funnel parts for MP Nu Gundam

|-
| colspan="4" class="fc-std-sc" |'''第３話: 逆襲！機界31原種 Scenario 3 - Counterattack! The 31 Machine Primevals!'''

|-
| colspan="4" |'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' (1) Ally battleship is defeated, One of the Machine Primevals reaches the edge of the map; (2) Ally battleship is defeated, One of the Machine Primevals reaches the edge of the map, J is defeated '''Skill Point:''' Defeat all enemies in 6 turns '''Secret Requirements:''' '''Unit Acquisition (Touma & Kusuha):'''
*J-Ark (J, Tomoro)
*Nu Gundam (Amuro)
*Ra Cailum (Bright, Torres)
*Jegan (Katz)
*MP Nu Gundam (Keyra)
*Albion (Synapse, Paserov)
*GP03 Dendrobium (Kou)
*GM Cannon II (Keith)
*GM Custom (Burning)
*GM Custom (Bate)
*GM Custom (Monsha)
*GM Cannon II (Adel)
*Zeta Gundam (Kamille)
*Re-GZ BWS (Four)
*Methuss (Fa)
*Super Gundam (Emma)
*Incom & Funnel parts for MP Nu Gundam
*Armed Fortress Orchis parts for Gundam Stamen
*G Defensor Parts for Gundam Mk-II
'''Unit Acquisition (Cobray & Selena):'''
*J-Ark (J, Tomoro)
*Mazinkaiser (Kouji)
*Diana A (Sayaka)
*Great Mazinger (Tetsuya)
*Venus A (Jun)
*Combattler V (Hyoma, Juzo, Daisaku, Chizuru, Kosuke)
*Koutetsu Jeeg (Jeeg)
*Big Shooter (Miwa)
*Shin Getter (Ryoma, Hayato, Benkei)
*Lady Command (Michiru)

|-
| colspan="4" class="fc-std-sc" |'''第４話：地獄門、開く Scenario 4 - The Gates of Hell Open'''

|-
| colspan="4" |'''Victory Condition:'''
*1st Part: Allied Battleship reaches the escape point in 5 turns, All Enemies are defeated in 5 turns
*2nd Part: Defeat all enemies
'''Defeat Condition:'''
*1st Part: Allied Battleship is defeated, Turn 6 starts
*2nd Part: SRX is defeated
'''Skill Point:''' Defeat all enemies in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*SRX (Damaged) (Ryuusei, Rai, Aya)

|-
| colspan="4" class="fc-std-sc" |'''第５話: 地球圏絶対防御線 Scenario 5 - The Earth Sphere’s Absolute Defense Line'''

|-
| colspan="4" |'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' (1) Ally battleship is defeated (2) Any allied unit is defeated '''Skill Point:''' Clear the stage in 6 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Mobieus Zero (Mwu)
*All Char's Counter Attack, Stardust Memory, and Zeta Gundam units are lost <ul><li>Nu Gundam(Amuro)</li><li>Ra Cailum (Bright, Torres)</li><li>MP Nu Gundam (Keyra)</li><li>Albion (Synapse, Paserov)</li><li>GP03 Dendrobium (Kou)</li><li>GM Cannon II (Keith)</li><li>GM Custom (Burning)</li><li>GM Custom (Bate)</li><li>GM Custom (Monsha)</li><li>GM Cannon II (Adel)</li><li>Zeta Gundam (Kamille)</li><li>Re-GZ BWS (Four)</li><li>Methuss (Fa)</li><li>Super Gundam (Emma)</li><li>Jegan (Katz)</li></ul>

|- class="fc-route-h"
|'''Touma Route''' Great Mazinger, Venus A, Boss Borot Steel Jeeg, Big Shooter
|'''Kusuha Route''' Getter Robo G, Lady Command Mazinger Z, Diana A Combattler V
|'''Cobray Route''' ZZ Gundam, ReGZ (BWS) Mobieus Zero
|'''Selena Route'''
|-
| class="fc-route1" |'''第６話：平和、遥か遠く Scenario 6 - A Faraway Peace'''
| class="fc-route2" |'''第６話：北米戦線、異常アリ Scenario 6 - Abnormalities on the North American Front'''
| class="fc-route3" |'''第６話：GUNDAM出撃 Scenario 6 - Gundam, Sortie'''
| class="fc-route4" |'''第６話：ザ・ビギニング Scenario 6 - The Beginning'''

|-
|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Any ally is defeated '''Skill Point:''' Defeat all enemies in 5 turns; Defeat the Yamata no Orochi last '''Secret Requirements:''' '''Unit Acquisition:'''
*GaiGar (Gai)
*Mic Sounders XIII (Mic Sounders XIII)

|'''Victory Condition:''' (1) Ally reaches the designated area; (2) Defeat all enemies '''Defeat Condition:''' Any ally defeated '''Skill Point:''' Reach target location without engaging in combat '''Secret Requirements:''' '''Unit Acquisition:'''
*Mazinkaiser → Mazinger Z (Kouji)
*Shin Getter Robo → Getter Robo G (Ryoma, Hayato, Benkei) 
*Dancouga (Shinobu, Sara, Masato, Ryo)

|'''Victory Condition:'''
*1st Part: Sigu is defeated, Vesalius is defeated
*2nd Part: Defeat all enemies 
'''Defeat Condition:'''
*1st Part: Any ally is defeated
*2nd Part: Any ally is defeated 
'''Skill Point:''' Accomplish either objective in 4 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Clop Class Battleship (Federation Officer)
*Wing Gundam Zero Kai (Heero)
*Gundam Deathscythe Hell Kai (Duo)
*Gundam Sandrock Kai (Quatre)
*Taurus (Hilde)
*Strike Gundam (Kira)

|'''Victory Condition:''' (1) AS Soleares reaches the designated point in 4 turns; (2) Defeat all enemies '''Defeat Condition:''' (1) Begin turn 5 without meeting victory conditions, Any ally is defeated; (2) Any ally is defeated '''Skill Point:''' Defeat all enemies in 4 turns and get the AS Soleares to the target square '''Secret Requirements:''' '''Unit Acquisition:'''
*CGUE (Rau)
*GINN (ZAFT Soldier) x 2
*Vesarius (Ades)

|-
| class="fc-route1" |'''第７話：燃えろ宙！妖花フローラの挑戦 Scenario 7 - Space Burns! The Enchanting Flora’s Challenge!'''
| class="fc-route2" |'''第７話：怒りの獣、野生の咆哮 Scenario 7 - The Wild Roar of the Raging Beast'''
| class="fc-route3" |'''第７話：崩壊の大地 Scenario 7 - Collapsing Land'''
| class="fc-route4" |'''第７話：ワンズ・ジャスティス Scenario 7 - One’s Own Justice'''

|-
|'''Victory Condition:''' 
*1st Part: Defeat all enemies
*2nd Part: Defeat all enemies
'''Defeat Condition:''' 
*1st Part: Any ally defeated
*2nd Part: Any ally defeated
'''Skill Point:''' Defeat all enemies in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*AnRyu (AnRyu)
*KouRyu (KouRyu)

|'''Victory Condition:''' (1) Defeat all enemies; (2) Defeat Dangel '''Defeat Condition:''' Any ally is defeated '''Skill Point:''' Defeat all Zubanzas, Boazan Flying Saucers, and Red Baloms within 4 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Black Wing (Alan)

|'''Victory Condition:''' (1) Defeat all enemies; (2) Archangel reaches the designated point, Defeat all enemies '''Defeat Condition:''' (1) Mwu is defeated; (2) Ally battleship is defeated, Kira or Mwu are defeated '''Skill Point:''' Defeat all enemies in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Strike Gundam (Kira)
*Archangel (Murrue, Natarle)
*Aile, Sword and Launcher Striker packs for Strike Gundam

|'''Victory Condition:''' Any ally reaches the designated point '''Defeat Condition:''' Any ally is defeated '''Skill Point:''' Defeat all enemies in 5 turns and get an allied unit to the target square '''Secret Requirements:''' '''Unit Acquisition:'''
*Altron Gundam (Wufei)
*Gundam Heavyarms Kai (Trowa)
*CGuE (Rau)
*Vesarius (Ades)
*Aegis Gundam (Athrun)
*Blitz Gundam (Nicol)
*Buster Gundam (Dearka)
*Duel Gundam (Yzak)

|-
| class="fc-route1" |'''第８話：立ち上がれ！勇気ある者達 Scenario 8 - Stand Up, People of Courage!'''
| class="fc-route2" |'''第８話：輝け！不死身の勇者 Scenario 8 - Shine, Undying Hero!'''
| class="fc-route3" |'''第８話：誘う声 Scenario 8 - An Inviting Voice'''
| class="fc-route4" |'''第８話：インビジブル・イントルーダー Scenario 8 - Invisible Intruder'''

|-
|'''Victory Condition:''' (1) Defeat all enemies; (2) ZX-02 is defeated '''Defeat Condition:''' (1) Any ally is defeated; (2) Gai is defeated, J is defeated '''Skill Point:''' Defeat all enemies in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*GaiGar → GaoGaiGar
*Mic Sounders XIII gains "Disc P", "Disc M", and "Disc X" attacks
*Goldymarg (Goldymarg)
*HyoRyu (HyoRyu)
*EnRyu (EnRyu)
*Big Volfogg (Big Volfogg)

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' (1) Any ally is defeated; (2) Akira is defeated '''Skill Point:''' Defeat the Bramble (retreats at 4000HP (E) / 6000HP (N) / 8000HP (H)) '''Secret Requirements:''' '''Unit Acquisition:'''
*Raideen (Akira)
*Bluegar (Jinguji, Mari)

|'''Victory Condition:'''
*1st Part: (1) Vesalius is defeated; (2) Defeat all enemies
*2nd Part: (1) Defeat all enemies; (2) Defeat all enemies except Valk Baal 
'''Defeat Condition:'''
*1st Part: Ally battleship is defeated, Seolla or Cobray are defeated
*2nd Part: Any ally is defeated 
'''Skill Point:''' Defeat Aegis, Duel, Buster, and Blitz Gundams in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Zeta Gundam (Kamille)
*Re-GZ BWS (Four)
*Methuss (Fa)
*Super Gundam (Emma)
*Ra Cailum (Bright, Torres)
*MP Nu Gundam (Cobray)
*Werkbau (Cobray)
*G Defensor parts for Gundam Mk-II

|'''Victory Condition:''' Reach turn 6 '''Defeat Condition:''' Any ally is defeated '''Skill Point:''' Defeat all the Jegans '''Secret Requirements:''' '''Unit Acquisition:'''
*CGuE (Rau)
*Vesarius (Ades)
*Aegis Gundam (Athrun)
*Blitz Gundam (Nicol)
*Buster Gundam (Dearka)
*Duel Gundam (Yzak)

|-
| class="fc-route1" |'''第９話：内なる修羅 Scenario 9 - Demons of War Within'''
| class="fc-route2" |'''第９話：再会！ニューヨーク解放戦 Scenario 9 - Reunion! The Battle to Retake New York'''
| class="fc-route3" |'''第９話：正義の在処 Scenario 9 - Where Justice Can Be Found'''
| class="fc-route4" |'''第９話：アベンジャー Scenario 9 - Avenger'''

|-
|'''Victory Condition:''' (1) Defeat all enemies; (2) Defeat Raioh '''Defeat Condition:''' (1) Any ally defeated; (2) Sanger is defeated '''Skill Point:''' Defeat the Bramble in 4 turns (retreats at 4000HP (E) / 6000HP (N) / 8000HP (H)) '''Secret Requirements:''' '''Unit Acquisition:'''
*Dygenguar (Sanger)
*Huckebein Mk-III Trombe (Ratsel)
*Raideen (Akira)
*Bluegar (Jingunji, Mari)
*Mazinger Z (Kouji)
**Mazinger Z (Kouji) and Great Mazinger (Tetsuya) gain the "Double Mazinger Blade" and "Double Burning Fire" combination attacks
*Diana A (Sayaka)
*Getter Robo G (Ryoma, Hayato, Benkei)
*Lady Command (Michiru)
*Combattler V (Hyoma, Juzo, Daisaku, Chizuru, Kosuke)

|'''Victory Condition:''' (1) Defeat all enemies; (2) Dancouga reaches the designated point; (3) Defeated Deathgaia, Dangel, and Warchamedes '''Defeat Condition:''' (1) Shinobu, Kusuha, or Bullet are defeated; (2) Shinobu, Kusuha, Bullet, or Alan are defeated; (3) Alan is defeated '''Skill Point:''' Clear the map in 8 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Black Wing (Alan)
*Dygenguar (Sanger)
*Huckebein Mk-III Trombe (Ratsel)

|'''Victory Condition:''' (1) Vesalius is defeated; Reduce the Muge Battleship under 2000 HP before it reaches the edge of the map '''Defeat Condition:''' (1) Ally battleship is defeated; (2) Muge Battleship reaches the western edge of the map '''Skill Point:''' Defeat all enemies before reducing the Muge Mothership's HP below 2000 or defeating it '''Secret Requirements:''' '''Unit Acquisition:'''

|'''Victory Condition:''' (1) Reduce the Archangel's HP to 50% or less, Defeat all enemies besides the Archangel; (2) Reduce the Varuch Ishar to 4000 HP or less. '''Defeat Condition:''' Any ally is defeated '''Skill Point:''' Defeat the Varuch Ishar (flees at 4000 HP) '''Secret Requirements:''' '''Unit Acquisition:'''
*CGuE (Rau)
*Vesarius (Ades)
*Aegis Gundam (Athrun)
*Blitz Gundam (Nicol)
*Buster Gundam (Dearka)
*Duel Gundam (Yzak)

|-
| class="fc-route1" |'''第１０話：激震の地底帝国 Scenario 10 - Tremors in the Underground Empire'''
| class="fc-route2" |'''第１０話：龍を喰らうもの Scenario 10 - That Which Devours the Dragon'''
| class="fc-route3" |'''第１０話：消えていく光 Scenario 10 - The Fading Light'''
| class="fc-route4" |'''第１０話：グッバイ・フレンズ Scenario 10 - Goodbye, Friends'''

|-
|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' All allies defeated, Science Fortress Lab destroyed '''Skill Point:''' Clear the map without the Science Fortress Lab taking damage '''Secret Requirements:''' '''Unit Acquisition:'''
*Raioh loses the "System LIOH" ability
*Raioh gains the "Rising Meteor" attack
*Dygenguar (Sanger)
*Huckebein Mk-III Trombe (Ratsel)

|'''Victory Condition:''' (1) Sanger is defeated; (2)(3) Defeat all enemies; (4)(5) ZX-02 is defeated '''Defeat Condition:''' (1) Bullet is defeated; (2) Sanger or Rastel are defeated; (3) Any ally is defeated; (4) Guy, Sanger, or Rastel are defeated; (5) Guy, J, Sanger, or Rastel are defeated '''Skill Point:''' Reduce Shin RyuOuKi to below 10000 HP within 3 turns of its arrival '''Secret Requirements:''' '''Unit Acquisition:'''
*Dygenguar (Sanger)
*Huckebein Mk-III Trombe (Ratsel)
*GaiGar (Guy)
*GaoGaiGar (Guy)
*Mic Sounders XIII (Mic Sounders XIII)
*Goldymarg (Goldymarg)
*HyoRyu (HyoRyu)
*EnRyu (Enryu)
*Volfogg (Volfogg)
*Great Mazinger (Tetsuya)
*Venus A (Jun)
*Boss Borot (Boss, Mucha, Nuke)
*Kotetsu Jeeg (Jeeg)
*Big Shooter (Miwa)
*Stealth Gao II parts for GaoGaiGar
*Gunbot parts for Volfogg

|'''Victory Condition:''' (1) Reduce the Blitz Gundam to under 7000HP; (2) The Gamow is defeated; (3) The Gamow is defeated and Imperial Guard are defeated '''Defeat Condition:''' (1)(2) Any ally is defeated; (3) Ally battleship is defeated '''Skill Point:''' Defeat the Gamow (retreats at 4000HP (E) / 6000HP (N) / 8000HP (H)) '''Secret Requirements:''' '''Unit Acquisition:'''
*Qubeley Mk-II (Puru)
*Qubeley Mk-II (Puru Two)
*Hyaku Shiki (Beecha)
*Gundam Mk-II (Elle)
*Jegan (Mondo)
*Megarider (Iino)
*YF-19 (Isamu)
*YF-21 (Guld)

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' (1) Any ally is defeated; (2) Ally battleship is defeated; (3) Ally battleship is defeated, Isamu or Guld are defeated '''Skill Point:''' Clear the map in 6 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Zeta Gundam (Kamille)
*Methuss (Fa)
*ReGZ (Four)
*Super Gundam (Emma)
*Mobius Zero (Mwu)
*Wing Gundam Zero Kai (Heero)
*Gundam Sandrock Kai (Quatre)
*Gundam Deathscythe Hell Kai (Duo)
*Taurus (Hilde)
*ZZ Gundam (Judau)
*ReGZ BWS (Roux)
*Qubeley Mk-II (Puru)
*Qubeley Mk-II (Puru Two)
*Hyaku Shiki (Beecha)
*Gundam Mk-II (Elle)
*Jegan (Mondo)
*Megarider (Iino)
*YF-19 (Isamu)
*YF-21 (Guld)

|-
| class="fc-route1" |'''第１１話：戦場の邂合、そして決別 Scenario 11 - An Battlefield Encounter, and Then a Departure'''
| class="fc-route2" |'''第１１話：新たなる人類 Scenario 11 - A New Mankind'''
| class="fc-route3" |'''第１１話：君と戦場で Scenario 11 - On the Battlefield with You'''
| class="fc-route4" |'''第１１話：パワー・ジャンクション Scenario 11 - Power Junction'''

|-
|'''Victory Condition:''' (1) Defeat all enemies; (2) Defeat Vesalius '''Defeat Condition:''' Ally battleship is defeated, Kira or Mwu are defeated '''Skill Point:''' Defeat all enemies in 7 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Archangel (Murrue)
*Strike Gundam (Kira)
*Moebius Zero (Mwu)
*Stealth Gao II Parts for GaoGaiGar
*Aile, Sword, and Launcher Striker packs for Strike Gundam

|'''Victory Condition:''' (1) Defeat all enemies; (2) Vesalius is defeated '''Defeat Condition:''' (1) Ally battleship is defeated, Kira or Mwu are defeated; (2) Ally battleship is defeated '''Skill Point:''' Defeat all enemies in 7 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Strike Gundam (Kira)
*Mobeius Zero (Mwu)
*Archangel (Murrue, Natarle)
*YF-19 (Isamu)
*YF-21 (Guld)
*Aile, Sword, and Launcher Striker packs for Strike Gundam

|'''Victory Condition:''' (1) Defeat all enemies (2) ZX-02 is defeated '''Defeat Condition:''' (1) Kira is defeated; (2) Any ally is defeated '''Skill Point:''' Defeat all enemies in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Wildburger (Arado)
*Great Mazinger (Tetsuya)
*Venus A (Jun)
*Boss Borot (Boss)
*Dancouga (Shinobu, Sarah, Masato, Ryo)
*Raideen (Akira)
*Bluegar (Jingunji)
*Mazinger Z (Kouji)
*Diana A (Sayaka)
*Getter Robo G (Ryoma, Hayato, Benkei)
*Lady Command (Michiru)
*Star Gaogaigar (Gai)
*Goldymarg (Goldymarg)
*Mic Sounders the 13th (Mic)
*Hyoryu (Hyoryu)
*Enryu (Enryu
*Big Volfogg (Volfogg)

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Defeat all enemies in 7 turns '''Secret Requirements:''' '''Unit Acquisition:'''

|-
| class="fc-route1" |'''第１２話：守るべきモノ Scenario 12 - What You Must Protect'''
| class="fc-route2" |'''第１２話：別れの宇宙 Scenario 12 - Farewells in Space'''
| class="fc-route3" |'''第１２話：ディーンの火 Scenario 12 - The Flames of Deen'''
| class="fc-route4" |'''第１２話：コンクルージョン Scenario 12 - Conclusion'''

|-
|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' All enemies defeated '''Skill Point:''' Defeat all enemies in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Gundam Wing Zero (Heero)
*Gundam Deathscythe Hell Kai (Duo)
*Gundam Sandrock Kai (Quatre)
*Gundam Heavyarms Kai (Trowa)
*Altron Gundam (Wufei)
*Taurus (Hilde)
*Zeta Gundam (Kamille)
*Re-GZ BWS (Four)
*Methuss (Fa)
*Gundam Mk-II (Emma)
*ZZ Gundam (Judau)
*Qubeley Mk-II (Puru)
*Qubeley Mk-II (Puru Two)
*Hyaku Shiki (Beecha)
*Gundam Mk-II (Elle)
*Jegan (Mondo)
*Megarider (Iino)
*YF-19 (Isamu) (After stage)
*YF-21 (Guld) (After stage)
*G Defensor parts for Gundam Mk-II

|'''Victory Condition:''' (1) Defeat all enemies; (2) Defeat Shin RyoOhKi; (3) Defeat the Imperial Guard '''Defeat Condition:''' (1)(2) Any ally is defeated; (3) Ally battleship is defeated '''Skill Point:''' Defeat Shin RyuOhKi before Victory Conditions are met '''Secret Requirements:''' '''Unit Acquisition:'''
*Gundam Wing Zero Kai (Heero)
*Gundam Deathscythe Hell Kai (Duo)
*Gundam Sandrock Kai (Quatre)
*Gundam Heavyarms Kai (Trowa)
*Altron Gundam (Wufei)
*Taurus (Hilde)
*Zeta Gundam (Kamille)
*Re-GZ BWS (Four)
*Methuss (Fa)
*Gundam Mk-II (Emma)
*ZZ Gundam (Judau)
*Qubeley Mk-II (Puru)
*Qubeley Mk-II (Puru Two)
*Hyaku Shiki (Beecha)
*Gundam Mk-II (Elle)
*Jegan (Mondo)
*Megarider (Iino)
*G Defensor parts for Gundam Mk-II

|'''Victory Condition:''' (1) Bramble, Magnum, and Zangaioh are defeated; (2) Defeat all enemies; (3) Defeat Valk Baal '''Defeat Condition:''' (1) Ally battleship is defeated, Arado is defeated; (2) Cobray, Arado or Seolla are defeated; (3) Cobray, Viletta, Sanger, or Rastel are defeated '''Skill Point:''' Clear the map in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Werkbau gains the "Axion Buster" attack
*Gundam Heavyarms Kai (Trowa)
*Altron Gundam (Wufei)
*Dygenguar (Sanger)
*Huckebein Mk-III Trombe (Ratsel)
*R-GUN Powered (Viletta)

|'''Victory Condition:''' (1)(2) ZX-08 is defeated; (3) Varuch Ishar is defeated '''Defeat Condition:''' (1) Ally battleship is defeated, (2) Ally battleship is defeated, J is defeated; (3) Ally battleships is defeated, Selena, Viletta, Sanger, or Rastel are defeated '''Skill Point:''' Defeat ZX-02 in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*J-ARK (J, Tomoro)
*R-GUN Powered (Viletta)
*Dygenguar (Sanger)
*Huckebein Mk-III Trombe (Ratsel)
*Vegalion (Slay)

|-
| colspan="4" class="fc-std-sc" |'''第１３話：もう一度、自らの足で Scenario 13 - Once Again, On Your Feet'''

|-
| colspan="4" |'''Victory Condition:''' ZX-06 is defeated '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Clear the map in 6 turns; Defeat all other enemies before ZX-06 '''Secret Requirements:''' '''Unit Acquisition:'''
*Evangelion Unit 0 Custom (Rei)
*Evangelion Unit 1 (Shinji)
*Evangelion Unit 2 (Asuka)

|-
| colspan="4" class="fc-std-sc" |'''第１４話：オペレーション・ハルパー Scenario 14 - Operation Harper'''

|-
| colspan="4" |'''Victory Condition:''' Reduce Hermoz Ehad's HP to below 120000HP (E) / 90000HP (N) / 80000HP (H) '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Achieve the victory condition in 7 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*HyoRyu (HyoRyu)
*EnRyu (EnRyu)

|-
| colspan="4" class="fc-std-sc" |'''第１５話：遥かなる凱歌 Scenario 15 - A Faroff Victory Song'''

|-
| colspan="4" |'''Victory Condition:''' Defeat the Combine Primeval '''Defeat Condition:''' Ally Battleship is defeated, J is defeated '''Skill Point:''' Defeat all enemies in 7 turns, leaving the combined Primeval for last '''Secret Requirements:''' '''Unit Acquisition:'''
*J-Ark (J, Tomoro)
*ALL units are unavailable until clearing Scenario 18

|-
| colspan="4" class="fc-std-sc" |'''第１６話：導かれる魂、銀河で Scenario 16 - Souls Guided by the Galaxy'''

|-
| colspan="4" |'''Victory Condition:'''
*1st Part: Defeat all enemies
*2nd Part: Defeat all enemies
'''Defeat Condition:'''
*1st Part: Ideon is defeated
*2nd Part: Any ally is defeated
'''Skill Point:''' Defeat all enemies in 4 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Ideon (Cosmo, Kasha, Bess → Moera)
*VF-17S Nightmare (Kinryu)
*VF-17D Nightmare (Gamlin)
*VF-17D Nightmare (Docker)
*Battle 7 (Max, Exedore, Miho, Sally)
*Soloship (Bess)

|-
| colspan="4" class="fc-std-sc" |'''第１７話：ディスコード・ハーモニー Scenario 17 - Discord / Harmony'''

|-
| colspan="4" |'''Victory Condition:''' (1)(2) Defeat the Zig Mac; (3) Defeat FZ-109F Elgarthorn '''Defeat Condition:''' (1) Any ally is defeated; (2) Any ally is defeated, Zig Mac moves next to the Soloship (3) '''Skill Point:''' Meet victory the condition in 4 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Battle 7 can now transform into "Enhanced Attack Mode"
*VF-17D Nightmare (Docker)

|-
| colspan="4" class="fc-std-sc" |'''第１８話：銀河流浪 Scenario 18 - Galactic Wandering'''

|-
| colspan="4" |'''Victory Condition:'''
*1st Part: Defeat FZ-109F Elgarthorn
*2nd Part: Defeat Zig Mac
'''Defeat Condition:'''
*1st Part: Any ally is defeated
*2nd Part: Any ally is defeated
'''Skill Point:''' Meet victory conditions in 3 turns '''Secret Requirements:'''
*Duel Gundam
**Take the Earth Route
*VF-1J S Valkyrie
**Take the Earth Route
*LaGOWE
**Take the Earth Route
'''Unit Acquisition:'''
*VF-17D Nightmare (Physica)
*VF-17S (Kinryu), VF-17D (Gamlin), and VF-17D (Physica) gain the "Diamond Force Attack" combination Attack
*Ideon gains the "Omnidirectional Missile" attack
*All Ideon and Macross 7 units are lost <ul><li>Ideon (Cosmo, Kasha, Moera)</li><li>Soloship (Bess)</li><li>Battle 7 (Max, Exedore, Miho, Sally)</li><li>VF-17S Nightmare (Kinryu)</li><li>VF-17D Nightmare (Physica)</li><li>VF-17D Nightmare (Gamlin)</li>

|}
 

==Stages 19 - 33==
{| width="100%"
|- class="fc-route-h"
| width="50%" |'''Descend to Earth''' Gundam 0083 Gundam Z ZZ Gundam Char's CounterAttack Gundam Wing Gundam SEED Macross 7 Macross Plus Evangelion
| width="50%" |'''Mount a Lunar offensive''' GaoGaiGar Ideon Mazinger (Z, Great) Getter Robo Steel Jeeg Combattler V Gaiking Raideen Dancouga GoShogun

|-
| class="fc-route1" |'''第１９話：宇宙に降る星 Scenario 19 - Stars Falling in Space'''
| class="fc-route3" |'''第１９話：悪夢への招待状 Scenario 19 - A Written Invitation to a Nightmare'''

|-
|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated, Kira is defeated '''Skill Point:''' Destroy all enemies in 6 turns '''Secret Requirements:'''
*Duel Gundam
**Destroy Yzak.
'''Unit Acquisition:'''
*Nu Gundam (Amuro)
*Jegan (Katz)
*MP Nu Gundam (Kayra)
*Incom and Fin Funnel parts for MP Nu Gundam
*Kira unlocks the SEED pilot skill
*Skygrasper
*Ra Cailum (Bright, Torres)

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Destroy the Muge battleship in 6 turns (retreats at 6000HP (E) / 8000HP (N) / 10000 HP (H)) '''Secret Requirements:''' 
'''Unit Acquisition:'''
*Daiku Maryu (Pete, Midori)
*Gaiking (Sanshiro)
*Skylar (Fan Li)
*Bazolar (Yamagatake)
*Nesser (Bunta)

|-
| class="fc-route1" |'''第２０話：強襲、砂漠の虎 Scenario 20 - Assault of the Desert Tiger'''
| class="fc-route3" |'''第２０話：異邦人達の帰還 Scenario 20 - The Foreigners Return'''

|-
|'''Victory Condition:''' Defeat the Lesseps '''Defeat Condition:''' Ally battleship is defeated, Kira is defeated '''Skill Point:''' Defeat the Lesseps in 6 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Kira unlocks the SEED pilot skill
*Albion (Synapse, Paserov)
*Gundam Stamen (Kou)
*GM Cannon II (Keith)
*GM Custom (Burning)
*GM Custom (Bate)
*GM Custom (Monsha)
*GM Cannon II (Adel)
*Gundam GP01fb
*Armed Base Orchis parts for Gundam Stamen

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Destroy Helmut's Muge battleship in 4 turns (retreats at 6000HP (E) / 8000HP (N) / 10000 HP(H)) '''Secret Requirements:''' '''Unit Acquisition:'''
*Ideon (Cosmo, Kasha, Moera)
*Ideon gains the "Ideon Sword" and "Ideon Sword (MAP)" attacks
*Soloship (Bess, Hatari)

|-
| class="fc-route1" |'''第２１話：プリティ・デビル Scenario 21 - Pretty Devil'''
| class="fc-route3" |'''第２１話：裏切りの代償 Scenario 21 - The Cost of Betrayal'''

|-
|'''Victory Condition:'''
*1st Part: Gigil's ship is defeated
*2nd Part: Gigil's ship is defeated 
'''Defeat Condition:'''
*1st Part: Any ally is defeated
*2nd Part: Basara is defeated
'''Skill Point:''' Destroy Gigil before he moves adjacent to Sivil '''Secret Requirements:'''
*LaGOWE
**Waltfeld and Dacosta must both survive and get a combined total of 10 kills or more on the first half of the scenario.
*VF-1J
**Milia must get a total of 10 kills in the first half of the scenario.
'''Unit Acquisition:'''
*VF-17S Nightmare (Kinryu)
*VF-17D Nightmare (Gamlin)
*VF-17D Nightmare (Physica)
*VF-1J S Valkyrie (Milia)
*LaGOWE (Waldfelt)
*BuCUE (Dacosta)
*Skygrasper (Cagalli)
*VF-19 Kai Fire Valkyrie (Basara)
*VF-17S Nighmare (Milia)
*VF-1J S Valkyrie

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Any ally is defeated '''Skill Point:''' Destroy all enemies in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Goshogun (Shingo, Killy, Remi)
*Good Thunder (Sabranth)

|-
| class="fc-route1" |'''第２２話：砂塵の果て Scenario 22 - Beyond the Clouds of Sand'''
| class="fc-route3" |'''第２２話：発動する力、無限大 Scenario 22 - Infinite Activation Power'''

|-
|'''Victory Condition:''' (1) Defeat the Lesseps; (2) Waltfeld is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated '''Skill Point:''' Defeat the Lesseps in 5 turns '''Secret Requirements:'''
*LaGOWE
**Kira must destroy Waltfeld's LaGOWE while in SEED. (Kira has to activate SEED mode before the event that ends the stage.)
'''Unit Acquisition:'''
*Kira unlocks the SEED pilot skill

|'''Victory Condition:''' (1) Soloship reaches the computer facility; (2) Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Get the Soloship to the indicated area in 4 turns without it taking any damage '''Secret Requirements:''' '''Unit Acquisition:'''
*HyoRyu (HyoRyu)
*EnRyu (EnRyu)

|-
| class="fc-route1" |'''第２３話：エモーション・ハイ Scenario 23 - Emotion High'''
| class="fc-route3" |'''第２３話：決戦！地獄の月荒野 Scenario 23 - Decisive Battle in the Hellish Lunar Wilderness!'''

|-
|'''Victory Condition:''' (1) Defeat 2 Ghosts; (2) Defeat all enemies; (3) Basara sings to Sivil, All ZAFT forces are defeated '''Defeat Condition:''' (1) Ally battleship is defeated, Battle 7 is defeated; (2) Ally battleship is defeated, Battle 7 is defeated, Isamu or Guld are defeated; (3) Ally battleship is defeated, Isamu, Guld, or Basara are defeated '''Skill Point:''' Clear the map in 9 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*YF-19's "Full Volley" attacks gains +200 Attack power
*YF-19 and YF-21 gain the "Double Pinpoint Barrier Punch" combination attack
*Battle 7 (Max, Exedore, Miho, Sally)
*VF-19 Kai Fire Valkyrie (Basara)
*Mazinkaiser
*Shin Getter Robo

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Clear the map in 9 turns '''Secret Requirements:''' '''Unit Acquisition:'''

|-
| colspan="2" class="fc-std-sc" |'''第２４話：戦神の星で Scenario 24 - On the Planet of the War God'''

|-
| colspan="2" |'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' (1) Any ally is defeated; (2) Ally battleship is defeated '''Skill Point:''' Destroy all enemies in 3 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*VF-19 Kai Fire Valkyrie (Basara)
*VF-11 MAXL Kai (Mylene)
*VF-17 Kai Nightmare (Ray, Veffidas)
*Tallgeese III (Zechs)
*Taurus (Noin)
*Voltes V (Kenichi, Ippei, Daijiroh, Hiyoshi, Megumi)
*Daimos (Kazuya)
*Garuba FX-II (Kyoshiro, Nana)

|-
| colspan="2" class="fc-std-sc" |'''第２５話：選ばれし者、選びし者 Scenario 25 - Those Who Are Chosen, Those Who Choose'''

|-
| colspan="2" |'''Victory Condition:''' (1) Hermos is defeated; (2) Zifrud is defeated '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Clear the map in 8 turns '''Secret Requirements:''' '''Unit Acquisition:'''

|-
| colspan="2" class="fc-std-sc" |'''第２６話：かりそめの旅人 Scenario 26 - Transitory Traveler'''

|-
| colspan="2" |'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated, Temjin, Fei Yen, or Apharmd are defeated '''Skill Point:''' Destroy all enemies in 3 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Temjin 747J (Chief)
*Fei Yen the Knight (Fei)
*Apharmd The Hatter (The Hatter)

|-
| colspan="2" class="fc-std-sc" |'''第２７話：勇気ある者達の誓い Scenario 27 - The Oath of the Courageous'''

|-
| colspan="2" |'''Victory Condition:'''
*1st Part: Defeat all enemies
*2nd Part: (1) Defeat all enemies; (2) Defeat the Z-Master within (10 (E) / 7 (N) / 5 (H)) turns 
'''Defeat Condition:'''
*1st Part: Ally battleship is defeated, Gai is defeated
*2nd Part: (1) Ally battleship is defeated, Gai or J are defeated; (2) (10 (E) / 7 (N) / 5 (H)) turns have passed, Ally battleship is defeated, Gai or J are defeated 
'''Skill Point:''' Destroy all enemies in 7 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*J-Ark (J, Tomoro)

|-
| colspan="2" class="fc-std-sc" |'''第２８話：いつか星の海へ Scenario 28 - Someday, In the Sea of Stars'''

|-
| colspan="2" |'''Victory Condition:''' (1)(2) Defeat the Zonder Robo; (3) Defeat the Zonder Robo within 6 attacks from Star GaoGaiGar; (4)(5) Defeat all enemies '''Defeat Condition:''' (1) Galeon is defeated; (2) Ally battleship is defeated, Galeon is defeated; (3) Ally battleship or Gai are defeated, Zonder Robo is not defeated within 6 attacks from Star GaoGaiGar (4) Main Character is defeated; (5) Ally battleship is defeated '''Skill Point:''' Destroy the Zonuder Robo in 5 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Galeon (Galeon)
*Star GaoGaiGar/GaoGaiGar (Gai)
*YF-19 (Isamu)
*YF-21 (Guld)
*Battle 7 (Max)
*VF-17S Nightmare (Milia)
*VF-17D Nightmare (Gamlin)
*VF-17D Nightmare (Physica)
*VF-19 Kai Fire Valkyrie (Basara)
*VF-11 MAXL Kai (Mylene)
*VF-17 Kai Nightmare (Ray, Veffidas)
*HyoRyu (HyoRyu)
*EnRyu (EnRyu)
*Goldymarg (Goldymarg)
*Volfogg (Volfogg)
*Mic Sounders XIII (Mic Sounder XIII)
*Ideon (Cosmo, Kasha, Moera)
*Soloship (Bess, Hatari)
*Star GaoGaiGar (Guy, Choryujin, Goldymarg, Mic, Volfogg)
*Dygenguar (Sanger)
*Aussenseiter (Ratsel)
*R-Blade Custom (Ryusei)
*R-Gun Powered (Viletta)

|-
| colspan="2" class="fc-std-sc" |'''第２９話：押された烙印 Scenario 29 - Branded with the Mark'''

|-
| colspan="2" |'''Victory Condition:''' (1)(2) Defeat all enemies '''Defeat Condition:''' (1) Ally battleship is defeated; (2) Ally battleship is defeated, Cagalli is defeated '''Skill Point:''' Destroy all enemies in 6 turns '''Secret Requirements:'''
*Destroid Monster
**Take the Space Route
*FBz-99G
**Take the Space Route
*Strike Rouge IWSP
**Cagalli must have 30 or more kills by the end of this stage.
***Take the Alaska Route
*Duel Gundam
**Take the Alaska Route
'''Unit Acquisition:'''
*GaoFighGar (Guy)
*HyoRyu (HyoRyu)
*EnRyu (EnRyu)
*Goldymarg (Goldymarg)
*Volfogg (Volfogg)/Big Volfogg (Big Volfogg)
*Mic Sounders XIII (Mic Sounders XIII)
*AnRyu (AnRyu)
*KouRyu (KouRyu)
*Ra Cailum (Bright, Torres)

|- class="fc-route-h"
|'''Head to Alaska''' Gundam (0083, Z, ZZ, CCA, Wing, SEED) Daitarn 3 Mazinger (Z, Great) Steel Jeeg Voltes V Daimos Dancouga Evangelion
|'''Go to Space''' GaoGaiGar Ideon Getter Robo Combattler V GaiKing Raideen Goshogun Macross (DYRL, 7, Plus) Virtual On

|-
| class="fc-route2" |'''第３０話：終わらない閃光 Scenario 30 - Unending Flashes of Light'''
| class="fc-route4" |'''第３０話：ロスト・ディーヴァ Scenario 30 - Lost Diva'''

|-
|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated, Kira is defeated '''Skill Point:''' Clear the map in 7 turns '''Secret Requirements:'''
*Strike Rouge IWSP
**Mwu must defeat Dearka
**After the event, Kira must defeat Athrun while both are in SEED.
'''Unit Acquisition:'''
*Skygrasper (Cagalli)
*Strike Gundam (Kira)
*Kira unlocks the SEED pilot skill
*Cagalli unlocks the SEED pilot skill (needs verification)
*Archangel loses Natarle as a subpilot

|'''Victory Condition:''' (1)(2) Defeat all enemies '''Defeat Condition:''' (1) Any ally is defeated: (2) Ally battleship is defeated, Fire Bomber, Diamond Force, or Skull Squadron are defeated '''Skill Point:''' In 6 turns, destroy Glavil and Gavil. You must destroy Glavil before Gavil '''Secret Requirements:'''
*Gavil and FBz-99G Zaubergeran
**Gamlin must defeat Gavil
'''Unit Acquisition:'''
*YF-19 (Isamu) (Before Deploying)
*YF-21 (Guld) (Before Deploying)
*VF-1S S Valkyrie (Focker)
*VF-1S S Valkyrie (Hikaru)
*VF-1A S Valkyrie (Kakizaki)
*VF-17D Nightmare (Gamlin)
*VF-17D Nightmare (Physica)
*VF-19 Kai Fire Valkyrie (Basara)
*VF-11 MAXL Kai (Mylene)
*VF-17 Kai Nightmare (Ray, Veffidas)

|-
| class="fc-route2" |'''第３１話：青き清浄なる世界のために Scenario 31 - For Our Blue & Pure World'''
| class="fc-route4" |'''第３１話：禁断の惑星へ Scenario 31 - To the Forbidden Planet'''

|-
|'''Victory Condition:''' (1) Defeat all enemies; (2)(3) Defeat all Mobile Dolls, All ZAFT Units retreat '''Defeat Condition:''' (1)(2) Ally battleship is defeated, Heero is defeated; (3) Ally battleship is defeated '''Skill Point:''' Do not let a single ZAFT machine get shot down '''Secret Requirements:'''
*Duel Gundam
**Yzak must survive the scenario.
'''Unit Acquisition:'''
*Archangel gains Newman as a subpilot
*Freedom Gundam (Kira)
*Daitarn 3 (Banjo)
*Black Wing (Alan)

|'''Victory Condition:'''
*1st Part: Defeat all enemies
*2nd Part: Defeat Gepelnitch
'''Defeat Condition:'''
*1st Part: Any ally is defeated
*2nd Part: Ally battleship is defeated, Basara or Gamlin are defeated
'''Skill Point:''' In 7 turns, destroy Glavil and Gavil and make Gepelnitch's ship retreat (at 50,000 HP) '''Secret Requirements:'''
*Destroid Monster
**Get the Skill Point on this stage.
*Gavil and FBz-99G Zaubergeran
**Gamlin must defeat Gavil 
'''Unit Acquisition:'''
*Destroid Monster

|-
| class="fc-route2" |'''第３２話：守護神の巫女 Scenario 32 - Priestess of the Guardian God'''
| class="fc-route4" |'''第３２話：インフィニティ・ソウル Scenario 32 - Infinity Soul'''

|-
|'''Victory Condition:''' (1)(2) Defeat all enemies '''Defeat Condition:''' Any Ally is defeated; Ally battleship is defeated, Sanger or Rastel are defeated '''Skill Point:''' In 5 turns, destroy the General of Hell or Flora. '''Secret Requirements:''' '''Unit Acquisition:'''
*Dygenguar (Sanger)
*Assenseiter (Ratsel)

|'''Victory Condition:''' (1) Valgo is defeated; (2)(3) Defeat all enemies '''Defeat Condition:''' (1) Mylene, Ray, or Gamlin are defeated; (2) Basara, Mylene, Ray, or Gamlin are defeated; (3) Ideon is defeated '''Skill Point:''' In 6 turns, destroy Valgo '''Secret Requirements:'''
*Gavil and FBz-99G Zaubergeran
**Gamlin must defeat Gavil 
'''Unit Acquisition:'''
*VF-17D Nightmare → VF-17S Nightmare (Gamlin)
*VF-17D Nightmare (Docker)
**VF-17S (Gamlin), VF-17D (Physica) and VF-17D (Docker) gain the "Diamond Force Attack" combination attack
*VF-19 Kai Fire Valkyrie, VF-11 MAXL Kai, and VF-17 Kai Nightmare gain the "Sound Booster" mech ability
**All VF-19 Kai Fire Valkyrie SB Songs gain (MAP) and (ALL) combination attack variants when Sound Booster activates.
**All VF-11 MAXL Kai SB Songs gain (MAP) and (ALL) combination attack variants when Sound Booster activates.
*Ideon (Cosmo, Kasha, Moera)
** Ideon gains the "Ideon Sword" and "Ideon Sword (MAP)" attacks when IDE gauge is full, and HP is below 30%
*Soloship (Bess, Hatari)

|-
| class="fc-route2" |'''第３３話：暁への脱出 Scenario 33 - Escape to Daybreak'''
| class="fc-route4" |'''第３３話：受け継ぎし遺産 Scenario 33 - The Successor's Inheritance'''

|-
|'''Victory Condition:''' (1)(2) Defeat all enemies besides the Albion '''Defeat Condition:''' (1) Ally battleship is defeated, Kira, Shinobu, or Alan are defeated, Albion is defeated; (2) Kira, Shinobu, Alan, Mwu, or Cagalli are defeated '''Skill Point:''' In 8 turns, destroy all enemies except the Albion '''Secret Requirements:''' '''Unit Acquisition:'''
*Strike Gundam (Mwu)
*Strike Rouge (Cagailli)
*M1 Astray (Juri)
*M1 Astray (Mayura)
*M1 Astray (Asagi)
*Justice Gundam (Athrun)
*Buster Gundam (Dearka)
*Mazinger Z gains the "Giant Swing Rocket Punch" attack
*Great Mazinger gains the "Great Booster" attack
*Koutetsu Jeeg stats are enhanced and can transform into Jeeg Panzeroid
*Dancouga and Black Wing can combine into Final Dancouga.

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated, Akira or Jinguji are defeated '''Skill Point:''' In 8 turns, destroy Etzira, Valgo, Glavil, Gabro Zan, and Gije '''Secret Requirements:''' '''Unit Acquisition:'''
*VF-1A S Valkyrie (Kakizaki)
*Raideen gains the Mutron Open mech ability
*Ideon (Cosmo, Kasha, Moera)
*Soloship (Bess, Hatari)
*Battle 7 (Max, Exedore, Miho, Sally)
*VF-1S S Valkyrie (Fokker)
*VF-1S S Valkyrie (Hikaru)
*VF-1A S Valkyrie (Kakizaki)
*YF-19 (Isamu)
*YF-21 (Guld)
*VF-19 Kai Fire Valkyrie (Basara)
*VF-11 MAXL Kai (Mylene)
*VF-17 Kai Nightmare (Ray, Veffidas)
*VF-17S Nightmare (Gamlin)
*VF-17D Nightmare (Physica)
*VF-17D Nightmare (Docker)

|}
 

==Stages 34 - 44==
{| width="100%"
|- class="fc-route-h"
| width="25%" |'''Touma Route'''
| width="25%" |'''Kusuha Route'''
| width="25%" |'''Cobray Route'''
| width="25%" |'''Selena Route'''

|-
| class="fc-route1" |'''第３４話：武人の心、その意味 Scenario 34 - Why a Warrior Fights'''
| class="fc-route2" |'''第３４話：怒りの強念者 Scenario 34 - The Wrath of a Esper'''
| class="fc-route3" |'''第３４話：虚ろな魂の捕囚 Scenario 34 - Captivity of the Hollow Soul'''
| class="fc-route4" |'''第３４話：ベトレイヤー Scenario 34 - Betrayer'''

|-
|'''Victory Condition:'''
*1st Part: (1)(2) Defeat all enemies
*2nd Part: Bemidoban is defeated 
'''Defeat Condition:'''
*1st Part: (1) Ally battleship is defeated; (2) Ally battleship is defeated, Touma is defeated
*2nd Part: Touma is defeated
'''Skill Point:''' Defeat all enemies within 6 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Raioh (Touma)
*Mazinger Z, Great Mazinger and Getter Dragon gain the "F Dynamic Special" combination attack

|'''Victory Condition:'''(1)(2) Shin RyuOhKi is defeated; (3)(4) Bemidoban and Shmuel are defeated '''Defeat Condition:''' (1) Any ally is defeated; (2) Kusuha is defeated; (3) Kusuha is defeated, Ally battleship is defeated; (4) Ally battleship is defeated '''Skill Point:''' Destroy the Bemidoban (retreats (8000 (E) / 10000 (N) / 12000 (H)) HP) '''Secret Requirements:''' '''Unit Acquisition:'''
*Mazinger Z, Great Mazinger and Getter Dragon gain the "F Dynamic Special" combination attack
*Dygenguar (Sanger)
*Aussenseiter (Ratsel)

|'''Victory Condition:''' Shin RyuOhKi is defeated '''Defeat Condition:''' Ally battleship is defeated, Cobray, Arad, or Seolla are defeated '''Skill Point:''' Defeat Shin RyuOuKi within 6 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Werkbau (Cobray)
*Mazinger Z, Great Mazinger and Getter Dragon gain the "F Dynamic Special" combination attack

|'''Victory Condition:''' (1) Shmuel is defeated; (2)(3) Bemidoban defeated Shin RyuOhKi '''Defeat Condition:''' (1) Selena is defeated; (2) Ally battleship is defeated, Selena is defeated; (3) Ally battleship is defeated '''Skill Point:''' Bemidoban and Shin RyuOuKi shot down. Both flee when below (8000 (E) / 10000 (N) / 12000 (H)) HP. '''Secret Requirements:''' '''Unit Acquisition:'''
*Mazinger Z, Great Mazinger and Getter Dragon gain the "F Dynamic Special" combination attack
*Alterion (CF) (Ibis, Tsugumi)
*AS Soleares (Selena, Elma) is unavailable during the intermission

|-
| class="fc-route1" |'''第３５話：闘志、誰がために Scenario 35 - For Whom the Fighting Spirit Burns'''
| class="fc-route2" |'''第３５話：魂、久遠に Scenario 35 - The Soul, Into Eternity'''
| class="fc-route3" |'''第３５話：THE GUN OF DIS Scenario 35 - THE GUN OF DIS'''
| class="fc-route4" |'''第３５話：クロージング・ハート Scenario 35 - Closing Heart'''

|-
|'''Victory Condition:''' (1)(2) Defeat all enemies '''Defeat Condition:''' (1) Touma is defeated; (2) Ally battleship is defeated, Touma, Sanger, or Rastel are defeated '''Skill Point:''' Defeat all enemies within 4 turns of allied reinforcements arriving. '''Secret Requirements:''' '''Unit Acquisition:'''
*DaiRaioh(Touma)
*Dygenguar (Sanger)
*Aussenseiter (Ratsel)

|'''Victory Condition:''' (1)(2)(3) Shin RyuOhKi is defeated '''Defeat Condition:''' (1) Kusuha or Bullet are defeated; (2) Kusuha is defeated; (3) Ally battleship is defeated, Kusuha is defeated '''Skill Point:''' Destroy Shin RyuOhKi within 6 turns of Varuch Ben and Ishar's arrival, destroying them first. '''Secret Requirements:''' '''Unit Acquisition:'''
*GouRyu Kai (Kusuha)
*Raiko Kai (Bullet)
*Shin RyuKoOh (Kusuha, Bullet)
*Dygenguar (Sanger)
*Aussenseiter (Ratsel)

|'''Victory Condition:''' (1)(2) Bemidoban or Shmuel are defeated; (3) ??? is defeated; (4) Valk Baal is defeated '''Defeat Condition:''' (1) Cobray is defeated, (2)(3)(4) Ally battleship is defeated, Cobray is defeated '''Skill Point:''' Defeat the Bemidoban within 5 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Varuch Ben (Cobray)
*Dis Astranagant (Cobray)

|'''Victory Condition:''' (1)(2) Defeat all enemies '''Defeat Condition:''' (1) Selena is defeated; (2) Ally battleship is defeated '''Skill Point:''' Map cleared within 7 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Eslim (Selena)
*Alterion (CF) replaces Tsugumi with Slay as a Subpilot

|-
| colspan="4" class="fc-std-sc" |'''第３６話：激突！勇者VS勇者！ Scenario 36 - Clash! Brave vs. Brave!'''

|-
| colspan="4" |'''Victory Condition:'''
*1st Part: Defeat all enemies
*2nd Part: Ally battleship is defeated
'''Defeat Condition:'''
*1st Part: Star GaoGaiGar is defeated
*2nd Part: Gai is defeated
'''Skill Point:''' Defeat all enemies within 6 turns. '''Secret Requirements:'''
*EVA-01 F-Type Equipment
**Shinji must defeat Ramiel on the first part of this scenario.
*Early Nu Gundam HWS
**Amuro must have 60 or more kills by the end of the scenario.
*GP-02A
**Burning, Monsha, Bate, and Adel must have a combined killcount of 100 or more by the end of the scenario.
*Nuclear Bazooka
**Meet the requirements for GP-02A
*Black Getter
**Michiru must have 20 kills or more by the end of the scenario.
'''Unit Acquisition:'''
*Gundam GP02
*Megarider
*Re-GZ BWS
*MP Nu Gundam
*Black Getter
*VF-1S S Valkyrie (Fokker)
*VF-1S S Valkyrie (Hikaru)
*VF-1A S Valkyrie (Kakizaki)
*VF-1J S Valkyrie
*YF-19 (Isamu)
*YF-21 (Guld)
*Battle 7 (Max)
*VF-19 Kai Fire Valkyrie (Basara)
*VF-11 MAXL Kai (Mylene)
*VF-17 Kai Nightmare (Ray)
*VF-17S Nightmare (Gamlin)
*VF-17D Nightmare (Physica)
*VF-17D Nightmare (Docker
*Soloship (Bess, Hatari)
*Ideon (Cosmo, Kasha, Moera)

|-
| colspan="4" class="fc-std-sc" |'''第３７話：果て無き旅路の始まり Scenario 37 - The Beginning of an Unending Journey'''

|-
| colspan="4" |'''Victory Condition:''' (1) Defeat all enemies; (2)(3) Devariim is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated; (3) Ally battleship is defeated, Bundle, Cutnall, or Kernagul are defeated
'''Skill Point:''' All enemies destroyed within 6 turns, with Devariim being last. '''Secret Requirements:''' '''Unit Acquisition:'''
*Heavy Weapons System parts for Nu Gundam
*Evangelion Unit 0 Custom gains the "N2 Mine" MAP attack
*Evangelion Unit 1 gains the "Magoroku E Sword" attack
*Gunbuster (Noriko)
*Sizzler Black (Jung)
*Eltrium (Tashiro, Deputy Chief)
*Bundle Ship (Bundle)
*Cutnall Ship (Cutnall)
*Kernagul Ship (Kernagul)

|- class="fc-route-h"
| colspan="2" |'''Go with the Soloship''' Gundam (0083, Zeta, ZZ, CCA, Wing, SEED) Getter Robo Raideen Daitarn 3 Evangelion Ideon GaoGaiGar
| colspan="2" |'''Go with the Battle 7''' Mazinger (Z, Great) Macross (DYRL, 7, Plus) Steel Jeeg Combattler V Voltes V Gunbuster Daimos Gaiking Goshogun Dancouga Virtual On

|-
| colspan="2" class="fc-route1" |'''第３８話：運命の炎の中で Scenario 38 - Within the Fires of Destiny'''
| colspan="2" class="fc-route3" |'''第３８話：戦火は星の瞬きと Scenario 38 - The Fires of War Among the Twinkling Stars'''

|-
| colspan="2" |'''Victory Condition:'''
*1st Part: Enemy Battleship is defeated
*2nd Part: (1) Defeat all enemies; (2) Dalam's Ship is defeated
'''Defeat Condition:'''
*1st Part: Ally battleship is defeated, Ideon is defeated
*2nd Part: (1) Ally battleship is defeated; (2) Ally battleship is defeated, Cosmo is defeated
'''Skill Point:''' Clear the map within 7 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Ideon loses Moera as a subpilot
*Ideon gains the "Ideon Gun" attack

| colspan="2" |'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Defeat all enemies within 6 turns. '''Secret Requirements:''' '''Unit Acquisition:'''

|-
| colspan="2" class="fc-route1" |'''第３９話：果てに待つもの Scenario 39 - What Awaits at the End'''
| colspan="2" class="fc-route3" |'''第３９話：ただ母星のために Scenario 39 - All for the Motherworld'''

|-
| colspan="2" |'''Victory Condition:''' (1)(2)Gabro Zan is defeated '''Defeat Condition:''' (1) Ally battleship is defeated, Ryouma, Hayato, Benkei, or Michiru are defeated; (2) Ally battleship is defeated, Ryouma, Hayato, Benkei, or Cosmo are defeated '''Skill Point:''' Destroy all Buff Clan ships within 8 turns, saving Gabro Zan for last. '''Secret Requirements:''' '''Unit Acquisition:'''
* Ideon gains Gije as a subpilot
* Shin Getter-1 gains the "Shin Shine Spark" attack

| colspan="2" |'''Victory Condition:''' Heinel is defeated '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Within 7 turns, defeat all enemies, then defeat Heinel and Richter (Richter must be defeated before Heinel) '''Secret Requirements:''' '''Unit Acquisition:'''

*Goshogun gains the "GoFlasher Special" attack

|-
| colspan="2" class="fc-route1" |'''第４０話：勇者王、最後の刻！ Scenario 40 - The King of Brave’s Final Hour!'''
| colspan="2" class="fc-route3" |'''第４０話：勇気、果つる時… Scenario 40 - When Courage Fails...'''

|-
| colspan="2" |'''Victory Condition:'''
*1st Part: Defeat all enemies
*2nd Part: Ally battleship is defeated
'''Defeat Condition:'''
*1st Part: Defeat all enemies
*2nd Part: Gai is defeated
'''Skill Point:''' Defeat all enemies within 6 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*All GaoGaiGar units are lost

| colspan="2" |'''Victory Condition:''' (1)(2)(3) Defeat all enemies '''Defeat Condition:''' (1) Gai is defeated; (2) Ally battleship is defeated, Gai is defeated; (3) Ally battleship is defeated '''Skill Point:''' Defeat all enemies within 7 turns, with Palparepa Plus being the last one. '''Secret Requirements:''' '''Unit Acquisition:'''
*GaoFighGar (Gai)
*All GaoGaiGar units are lost

|-
| colspan="4" class="fc-std-sc" |'''第４１話：銀河が消滅する日 Scenario 41 - The Day the Galaxy is Extinguished'''

|-
| colspan="4" |'''Victory Condition:''' (1) Defeat all enemies; (2) GaoFighGar is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated, J is defeated '''Skill Point:''' GaoFighGar shot down by turn 7. '''Secret Requirements:'''
*Gije & Ganga Rube
**When given the option, choose to meet the opponent's challenge (first option).
'''Unit Acquisition:'''
*J-Ark (J, Tomoro)
|-
| colspan="4" class="fc-std-sc" |'''第４２話：超勇者黙示録 Scenario 42 - The Super Brave Apocalypse'''

|-
| colspan="4" |'''Victory Condition:'''
*1st Part: Defeat all enemies
*2nd Part: Genesis GaoGaiGar reaches the designated point in 4 turns
'''Defeat Condition:'''
*1st Part: Gai or J are defeated
*2nd Part: Ally battleship is defeated, Gai is defeated, 5th turn is reached
'''Skill Point:''' All enemies shot down by turn 7. '''Secret Requirements:'''
* J-Phoenix & Renais (Sub Pilot)
**Have J defeat Pia Decem on the first part of the stage. Defeat Pia Decem again to gain the attack.
'''Unit Acquisition:'''
* King J-der gains the "J-Phoenix" attack, and gains Renais as a sub-pilot
**Koryuu and Anryuu lose the "Renais Support Attack" attacks
*Genesic GaoGaiGar (Gai)
*J-Ark (J, Tomoro)
** Renais also is a sub-pilot if the conditions are met in the first part of the stage
*Goldymarg (Goldymarg)
*Big Volfogg (Volfogg)
*TenRyuJin (TenRyuJin)
*KoRyu (KoRyu)
*AnRyu (AnRyu)
*EnRyu (EnRyu)
*HyoRyu (HyoRyu)
*Mic Sounder XIII (Mic Sounder XIII)

|- class="fc-route-h"
|'''Touma Route'''
|'''Kusuha Route'''
|'''Cobray Route'''
|'''Selena Route'''

|-
| class="fc-route1" |'''第４３話：閉ざされた世界で Scenario 43 - In a Closed-Off World'''
| class="fc-route2" |'''第４３話：真の龍神 Scenario 43 - The True Dragon God'''
| class="fc-route3" |'''第４３話：人形たちの宴 Scenario 43 - The Doll’s Banquet'''
| class="fc-route4" |'''第４３話：サイレント・クライ Scenario 43 - Silent Cry'''

|-
|'''Victory Condition:'''
*1st Part: (1) Defeat all enemies; (2) Vaikran is defeated, Houle is defeated
*2nd Part: Baran is defeated
'''Defeat Condition:'''
*1st Part: (1) Ally battleship is defeated, Touma or Ryusei are defeated; (2) Ally battleship is defeated, Ryusei is defeated
*2nd Part: Touma is defeated
'''Skill Point:''' Defeat the Bemidoban within 5 turns. '''Secret Requirements:''' '''Unit Acquisition:'''

|'''Victory Condition:''' (1) Defeat Shin RyuOhKi; (2) Vaikran is defeated, Houle is defeated '''Defeat Condition:''' (1) Kusuha or Ryusei are defeated; (2) Ally battleship is defeated, Ryusei is defeated '''Skill Point:''' Defeat Shin RyuOhKi within 5 turns. '''Secret Requirements:''' '''Unit Acquisition:'''

|'''Victory Condition:'''
*1st Part: (1) Defeat all enemies; (2) Vaikran is defeated, Houle is defeated
*2nd Part: Valk Baal is defeated
'''Defeat Condition:'''
*1st Part: (1)(2) Ally battleship is defeated, Ryusei is defeated
*2nd Part: Cobray is defeated
'''Skill Point:''' Defeat the Bemidoban within 5 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Dis Astranagant (Cobray) is unavailable during the intermission

|'''Victory Condition:''' (1) Defeat all enemies; (2)(3) Vaikran is defeated, Houle is defeated'''Defeat Condition:''' (1)(2) Ally battleship is defeated, Selena, Ibis, or Ryusei are defeated (3) Ryusei is defeated'''Skill Point:''' Defeat the Bemidoban within 5 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*AS Alegrias (Selena, Elma?) Is unavailable until the next stage

|-
| class="fc-route1" |'''第４４話：闘志、未来のために Scenario 44 - Fighting Spirit, for the Future'''
| class="fc-route2" |'''第４４話：四神招魂、ここに Scenario 44 - The Four Gods Souls, Gather Here'''
| class="fc-route3" |'''第４４話：鋼の戦神 Scenario 44 - The Steel War God'''
| class="fc-route4" |'''第４４話：マイホーム・マイフレンズ Scenario 44 - My Home, My Friends'''

|-
|'''Victory Condition:'''
*1st Part: Vaikran is defeated
*2nd Part: (1)(2) Vaikran is defeated
'''Defeat Condition:'''
*1st Part: Ally battleship is defeated, Ryusei is defeated
*2nd Part: (1) Touma or Lyria are defeated; (2) Touma, Baran, or Lyria are defeated
'''Skill Point:''' Destroy the Vaikran within 5 turns. '''Secret Requirements:'''
*VF-19F Excaliburs
**Max must have a total of 60 or more kills by the end of the scenario, if you do not pick the Go to Varauta route.
*Gije & Ganga Rube
**You must pick the Go To Bozoan Route.
'''Unit Acquisition:'''
*Banpreios (Ryuusei, Rai, Mai)
*Dygenguar (Sanger)
*Aussenseiter (Ratsel)
*Shumel (Lyria)
*Bemidoban (Baran)

|'''Victory Condition:'''
*1st Part: Vaikran is defeated
*2nd Part: (1)(2) Vaikran is defeated
'''Defeat Condition:'''
*1st Part: Kusuha or Ryusei are defeated
*2nd Part: (1) Ally battleship is defeated, Kusuha is defeated; (2) Kusuha, Bullet, or Lyria are defeated
'''Skill Point:''' Destroy the Vaikran within 5 turns. '''Secret Requirements:'''
*VF-19F Excaliburs
**Max must have a total of 60 or more kills by the end of the scenario, if you do not pick the Go to Varauta route.
*Gije & Ganga Rube
**You must pick the Go To Bozoan Route.
'''Unit Acquisition:'''
*Banpreios (Ryuusei, Rai, Mai)
*Dygenguar (Sanger)
*Aussenseiter (Ratsel)
*Shumel (Lyria)
*Shin RyuKoOh can now transform into Shin KoRyuOh

|'''Victory Condition:'''
*1st Part: (1) Defeat all enemies; (2) Vaikran is defeated
*2nd Part: Defeat all enemies
'''Defeat Condition:'''
*1st Part: (1)(2) Ally battleship is defeated, Ryusei, Arad or Seola are defeated
*2nd Part: Ally battleship is defeated, Cobray or Lyria are defeated
'''Skill Point:''' Destroy the Vaikran within 3 turns of its arrival. '''Secret Requirements:'''
*VF-19F Excaliburs
**Max must have a total of 60 or more kills by the end of the scenario, if you do not pick the Go to Varauta route.
*Gije & Ganga Rube
**You must pick the Go To Bozoan Route.
'''Unit Acquisition:'''
*Dis Astranagant (Cobray)
*Banpreios (Ryuusei, Rai, Mai)
*Dygenguar (Sanger)
*Aussenseiter (Ratsel)
*Shumel (Lyria)

|'''Victory Condition:'''
*1st Part: (1) Valk Isher is defeated; (2) Vaikran is defeated
*2nd Part: (1)(2) Vaikran is defeated
'''Defeat Condition:'''
*1st Part: (1)(2) Ally battleship is defeated, Ryusei or Ibis are defeated
*2nd Part: (1) Ally battleship is defeated, Selena, Ibis, or Lyria are defeated; (2) Selena or Lyria are defeated
'''Skill Point:''' Destroy the Vaikran within 3 turns of its arrival. '''Secret Requirements:'''
*VF-19F Excaliburs
**Max must have a total of 60 or more kills by the end of the scenario, if you do not pick the Go to Varauta route.
*Gije & Ganga Rube
**You must pick the Go To Bozoan Route.
'''Unit Acquisition:'''
*Banpreios (Ryuusei, Rai, Mai)
*Dygenguar (Sanger)
*Aussenseiter (Ratsel)
*Shumel (Lyria)
*Alterion (CF) replaces Slay with Tsugumi as a subpilot
*Vegalion (Slay)
**Alterion (CF) and Vegalion can combine into Hyperion

|}
 

==Stages 45 - 48==
{| width="100%"
|- class="fc-route-h"
| colspan="2" |'''Go to Earth'''
| colspan="2" |'''Go to Space'''

|- class="fc-route-h"
| width="25%" |'''Search for Irui''' Mazinger (Z, Great) Getter Robo Kotetsu Jeeg Gaiking Dancouga
| width="25%" |'''Fight against ZAFT''' Gundam (0083, Z, ZZ, CCA) Gundam Wing Gundam SEED Evangelion
| width="25%" |'''Go to Varauta''' Macross (DYRL, 7, Plus) GoShogun Daitarn 3 Gunbuster
| width="25%" |'''Go to Boazan''' Ideon Combattler V Voltes V Daimos Raideen GaoGaiGar Virtual On

|-
| class="fc-route1" |'''第４５話：とらわれの心、叫ぶ時 Scenario 45 - When the Captive Heart Cries Out'''
| class="fc-route2" |'''第４５話：忍び寄る終焉 Scenario 45 - Creeping Death'''
| class="fc-route3" |'''第４５話：悪夢の突入作戦 Scenario 45 - Charging into a Nightmare'''
| class="fc-route4" |'''第４５話：もう一つの母星ボアザン Scenario 45 - Another Mother Planet - Boazan'''

|-
|'''Victory Condition:''' (1) Defeat all enemies: (2) Legion is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated '''Skill Point:''' Defeat all enemies within 7 turns '''Secret Requirements:'''
'''Unit Acquisition:'''

|'''Victory Condition:''' (1) Defeat all enemies; (2) All Angels are defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated, Shinji, Asuka, or Rei are defeated '''Skill Point:''' Defeat all enemies within 5 turns. '''Secret Requirements:'''
*Early Nu Gundam HWS
**If you did not receive it on Scenario 37, Amuro must have 60 or more kills by the end of the scenario.
*EVA-01 F-Type Equipment(optional)
**Shinji must defeat Armisael.
*Neue Ziel
**Kou must have 40 or more kills than Keith by the end of the scenario.
*Val Varo
**Keith must have 20 or more kills than Kou by the end of the scenario.
*Gerbera Tetra
**Kou and Keith's killcounts must be within 6 of one another by the end of the scenario.
*Quin Mantha
**The sum of Ple and Ple 2's killcounts must be a number ending in 5 at the end of the scenario.
*Haman's Qubeley
**The sum of Ple and Ple 2's killcounts must be a number ending in 0 at the end of the scenario.
*MP Qubeleys
**The sum of Ple and Ple 2's killcounts must be a number ending in 7 at the end of the scenario.
*Doven Wolf
**The sum of Beecha and Mondo's killcounts must be a number ending in 0 at the end of the scenario.
*Geymalk
**The sum of Beecha and Mondo's killcounts must be a number ending in 5 at the end of the scenario.
*Strike Rouge IWSP
**The sum of Cagalli, Julie, Mayura, and Asagi's killcounts must be 100 or more by the end of the scenario.
*Early Full Armor ZZ Gundam
**Judau, Mondo, Beecha, Elle, Roux, and Iino's combined killcounts must be greater than 115 by the end of this scenario.
'''Unit Acquisition:'''
*Neue Ziel OR Val Varo OR Gerbera Tetra
*Quin Mantha OR Haman's Qubeley OR Mass Production Qubeley (x2)
*Doven Wolf OR Geymalk
*Strike Rougue IWSP
*Heavy Weapon System for Nu Gundam
*Full Armor Parts for ZZ Gundam
*Evangelion Unit 2 gains the "A.T. Field" attack
*Evangelion Unit 0 Custom gains the "Lance of Longinus" attack

|'''Victory Condition:'''
*1st Part: All allies reach the designated point, aside Battle 7
*2nd Part: Any ally reaches the designated point
'''Defeat Condition:'''
*1st Part: Any ally is defeated
*2nd Part: Any ally is defeated
'''Skill Point:''' Defeat all enemies before moving a unit to the target area. '''Secret Requirements:'''
'''Unit Acquisition:'''
*The following all gain the "Large Anti-Ship Reaction Missile" attack
**VF-1S S Valkyrie (Focker), VF-1S S Valkyrie (Hikaru), VF-1A S Valkyrie (Kakizaki)
**VF-17S Nightmare (Gamlin), VF-17D Nightmare (Docker), VF-17D Nightmare (Physica)
**YF-19 (Isamu), YF-21 (Guld)

|'''Victory Condition:''' Zartan is defeated '''Defeat Condition:''' Any ally is defeated '''Skill Point:''' Destroy all other enemies before destroying Zaltan. '''Secret Requirements:'''
'''Unit Acquisition:'''
*Voltes V is unavailable during the intermission
*Daimos is unavailable during the intermission

|-
| class="fc-route1" |'''第４６話：さらば父よ、戦士達の旅立ち Scenario 46 - Farewell, Father! The Warriors Depart'''
| class="fc-route2" |'''第４６話：永遠を信じて Scenario 46 - Believe in Eternity'''
| class="fc-route3" |'''第４６話：野望の第４惑星 Scenario 46 - The Fourth Planet of Ambition'''
| class="fc-route4" |'''第４６話：崩れゆく邪悪の塔 Scenario 46 - The Collapsing Tower of Evil'''

|-
|'''Victory Condition:''' (1) Steel Jeeg persuades Flora; (2) Defeat Yamata no Orochi, Demonica, and the Dragon Ship; (3) '''Defeat Condition:''' (1) Flora is defeated, Ally battleship is defeated, Kouji, Tetsuya, or Steel Jeeg are defeated; (2) Yamata no Orochi reaches the designated point, Ally battleship is defeated, Kouji, Tetsuya or Steel Jeeg are defeated '''Skill Point:''' Destroy Ryuuma and the Grand Marshall of Hell within 8 turns. '''Secret Requirements:'''
*Minmei's Disc
**Move Boss's squad onto either 'Hut' tile on the beach, and you will pick up the item
'''Unit Acquisition:'''
*Mazinkaizer gains the "Kaizer Nova" attack and Flight (S Rank in Air)

|'''Victory Condition:''' (1)(2) Defeat all enemies; (3) The Dominion withdraws '''Defeat Condition:''' (1) Any ally is defeated; (2)(3) Ally battleship is defeated, Kira or Athrun are defeated '''Skill Point:''' Destroy the Dominion (retreats at (10000HP (E) / 15000HP (N)/20000HP (H)) '''Secret Requirements:''' '''Unit Acquisition:'''
*Eternal (Lacus, Andrew)
*BuCUE
*METEOR parts for Freedom Gundam
*METEOR parts for Justice Gundam
*LaGOWE

|'''Victory Condition:''' (1) Guide all enemies east past the designated line; (2) All allies reach the escape point '''Defeat Condition:''' (1) Any ally is defeated, Any enemy is defeated; (2) Any ally is defeated '''Skill Point:''' Clear the map by defeating all enemies within 8 turns of the victory condition change '''Secret Requirements:'''
*VF-19F Excaliburs
**Max must get 15 or more kills on this scenario.
'''Unit Acquisition:'''
*VF-22S Sturmvogel II (Max)
*FBz-99G Zaubergeran (Gamlin)
*VF-19 Kai Fire Valkyrie gains the song "TRY AGAIN"
**VF-19 Kai Fire Valkyrie, VF-11 MAXL Kai, and VF-17 Kai Nightmare gain the "TRY AGAIN" (MAP) and (ALL) combination attack

|'''Victory Condition:''' (1) None; (2) Warchimedes is defeated; (3) Janera is defeated '''Defeat Condition:''' (1) Any friendly unit is defeated, Voltes V or Daimos are defeated; (2)(3) Ally battleship is defeated, Hyouma, Ken'ichi, Kazuya, or Heinel are defeated '''Skill Point:''' Destroy all enemies and finish the stage within 10 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Combattler V, Voltes V, and Daimos gain the "Choudenji SeiKenZuki" combination attack

|-
| class="fc-route1" |'''第４７話：神になろうとした男 Scenario 47 - The Man Who Tried to Become a God'''
| class="fc-route2" |'''第４７話：ヒトの見た夢 Scenario 47 - The Dream People Saw'''
| class="fc-route3" |'''第４７話：大宇宙の意志 Scenario 47 - The Will of the Universe'''
| class="fc-route4" |'''第４７話：因果の海で Scenario 47 - In the Sea of Causality'''

|-
|'''Victory Condition:''' (1) Defeat all enemies; (2) Shapiro is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated '''Skill Point:''' Destroy Shapiro within 6 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Gaiking and Daiku Maryuu gain the "Giant Cutter Upside-down Slash" combination attack

|'''Victory Condition:''' (1)(2)(3) Defeat all enemies; '''Defeat Condition:''' (1) Ally battleship is defeated, Kira, Mwu, or Dearka are defeated; (2) Kira is defeated; (3) The Vesalius is defeated '''Skill Point:''' Orga, Clotho and Shani shot down before Fllay reaches the Dominion. '''Secret Requirements:''' '''Unit Acquisition:'''

|'''Victory Condition:''' (1)(2)(3) Defeat all enemies '''Defeat Condition:''' (1) Any ally is defeated; (2) Ally battleship is defeated, Bundle is defeated; (3) Ally battleship is defeated, Bundle, Gamlin, or Mylene are defeated '''Skill Point:''' Destroy all SMTC units within 5 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*VF-19S Excalibur (before deployment)
*VF-19F Excalibur (x2) (before deployment)
*Bundle's Ship (Bundle, Cutnal, Kernagul)

|'''Victory Condition:'''
*1st and 2nd Part: Defeat all enemies within (5 (E) / 4 (N) / 3 (H)) turns
*3rd and 4th Part: Defeat all enemies within (4 (E) / 3 (N) / 2 (H)) turns
*5th Part: Defeat all enemies within (8 (E) / 7 (N) / 6 (H)) turns
'''Defeat Condition:'''
*1st and 2nd Part: Ally battleship is defeated, Turn (6 (E) / 5 (N) / 4 (H)) is reached
*3rd and 4th Part: Ally battleship is defeated, Turn (5 (E) / 4 (N) / 3 (H)) is reached
*5th Part: Ally battleship is defeated, Turn (9 (E) / 8 (N) / 7 (H)) is reached
'''Skill Point:''' During the 5th Part: Shoot down the two Gataman Zans before the Gabro Zan '''Secret Requirements:''' '''Unit Acquisition:'''

|-
| colspan="2" class="fc-route1" |'''第４８話：失われた者たちへの鎮魂歌 Scenario 48 - Requiem for the Lost'''
| colspan="2" class="fc-route4" |'''第４８話：銀河に死す Scenario 48 - To Die in the Galaxy'''

|-
| colspan="2" |'''Victory Condition:''' (1) Deathgaia, Gildrome, and Helmut are defeated; (2) Mute Zalbados is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated '''Skill Point:''' Defeat all enemies within 6 turns after Muge Zalbados appears, then defeat Muge Zalbados '''Secret Requirements:'''
*Early Nu Gundam HWS
**If you did not receive it on Scenario 37 or 45, Amuro must have 60 or more kills by the end of the scenario.
'''Unit Acquisition:'''

| colspan="2" |'''Victory Condition:''' (1) Defeat all enemies; (2) Gollum or Zomd are defeated; (3) Defeat all enemies; (4) Gabro Zan is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated, Basara is defeated; (3)(4) Ally battleship is defeated, Ideon is defeated '''Skill Point:''' Destroy GaviGla (retreats at 8000HP (E) / 10000HP (N) / 12000HP (H)) '''Secret Requirements:'''
*Early Nu Gundam HWS
**If you did not receive it on Scenario 37 or 45, Amuro must have 60 or more kills by the end of the scenario.
*Gije & Ganga Rube
**The Ide Gauge must reach level 5 during this scenario.
'''Unit Acquisition:'''
*Ideon replaces Gije with Dek as a Subpilot
*Battle 7 gains the "Large Anti-Ship Reaction Missile" attack
*VF-19 Kai Fire Valkyrie (Basara) is unavailable during the intermission

|}
 

==Stages 49 - 58==
{| width="100%"
|-
| colspan="3" class="fc-std-sc" |'''第４９話：銀河に響く歌声 Scenario 49 - Songs Resounding Through the Galaxy'''

|-
| colspan="3" |'''Victory Condition:'''
*1st Part: Defeat all enemies, In 5 turns Battle 7 reaches the designated point
*2nd Part: (1) In 6 turns, Battle 7 reaches the designated point; (2)(3)(4) Gepelnitch is defeated
'''Defeat Condition:'''
*1st Part: Ally battleship is defeated, Battle 7 doesn't reach the designated point by turn 6
*2nd Part: (1) Ally battleship is defeated, Mylene or Ray are defeated, Battle 7 doesn't reach the designated point by turn 7; (2) Ally battleship is defeated, Ray is defeated; (3) Ally battleship is defeated, Basara, Mylene, or Ray are defeated; (4) Ally battleship is defeated, Basara, Mylene, Ray, or Sybil are defeated
'''Skill Point:''' GaviGla is defeated (in the 1st part) '''Secret Requirements:'''
*Gavil and FBz-99G Zaubergeran
**If Gamlin has over 50 kills, Gamlin must defeat GaviGla during the first half of the scenario. During the second half of the scenario, do not defeat Gavil.
'''Unit Acquisition:'''
*VF-22S Sturmvogel II (Max)
*VF-22S Sturmvogel II (Milia)
*Sybil (Sybil)
**VF-19 Kai Fire Valkyrie, VF-11 MAXL Kai, and VF-17 Kai Nightmare, and Sybil gain the "TRY AGAIN" combination attack
*FBz-99G Zaubergeran (Gavil)

|-
| colspan="3" class="fc-std-sc" |'''第５０話：二つの門と二つの星 Scenario 50 - Two Gates, Two Stars'''

|-
| colspan="3" |'''Victory Condition:''' (1) Hermodr Echad is defeated; (2) Zfield is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated '''Skill Point:''' Destroy the Hermodr Echad within 5 turns. '''Secret Requirements:'''
*Duel Gundam & Yzak
**Dearka's killcount must be 50 or more by the end of the scenario.
'''Unit Acquisition:'''

|-
| colspan="3" class="fc-std-sc" |'''第５１話：終わらない明日へ Scenario 51 - To an Unending Tomorrow'''

|-
| colspan="3" |'''Victory Condition:'''
*1st Part: (1) Destroy all nuclear missiles; (2) Dominion is defeated & Athrun reaches the designated point
*2nd Part: Destroy the Genesis reactor within 4 turns
'''Defeat Condition:'''
*1st Part: (1) Any missile reaches the end of the map, Ally battleship is defeated, Kira, Athrun or Cagalli are defeated; (2) Ally battleship is defeated, Kira, Athrun or Cagalli are defeated
*2nd Part: Kira is defeated, reach the 5th turn
'''Skill Point:''' Destroy the Providence Gundam (in the 2nd part) '''Secret Requirements:'''
*Duel Gundam & Yzak
**During the first half of the scenario, destroy all of the nukes, then have Dearka battle with Yzak
**Both must survive the first half of the scenario
'''Unit Acquisition:'''
*Lacus unlocks the SEED pilot skill
*Duel Gundam (Yzak)

|-
| colspan="3" class="fc-std-sc" |'''第５２話：世界の中心でアイを叫んだもの Scenario 52 - The One Who Cried "Love" at the Heart of the World'''

|-
| colspan="3" |'''Victory Condition:'''
*1st Part: (1)(2)(3) Defeat all enemies (4)(5) EVA Unit 1 is defeated
*2nd Part: EVA Unit 1 is defeated
'''Defeat Condition:'''
*1st Part: (1) Any ally is defeated; (2) Shinji is defeated; (3)(4) Ally battleship is defeated; (5) Ally battleship is defeated, Reach the 6th turn after the "Cross" grows from the Earth
*2nd Part: Shinji is defeated
'''Skill Point:''' Asuka survives for 2 full turns. '''Secret Requirements:'''
*Neue Ziel
**Kou must have 40 or more kills than Keith by the end of the scenario.
*Val Varo
**Keith must have 20 or more kills than Kou by the end of the scenario.
*Gerbera Tetra
**Kou and Keith's killcounts must be within 6 of one another by the end of the scenario.
*Quin Mantha
**The sum of Ple and Ple 2's killcounts must be a number ending in 5 at the end of the scenario.
*Haman's Qubeley
**The sum of Ple and Ple 2's killcounts must be a number ending in 0 at the end of the scenario.
*MP Qubeleys
**The sum of Ple and Ple 2's killcounts must be a number ending in 7 at the end of the scenario.
*Doven Wolf
**The sum of Beecha and Mondo's killcounts must be a number ending in 0 at the end of the scenario.
*Geymalk
**The sum of Beecha and Mondo's killcounts must be a number ending in 5 at the end of the scenario.
*EVA-01 F-Type Equipment
**Shinji must defeat Zeruel on the first part of this scenario.
**Shinji must defeat EVA-01 on the second part of this scenario.
**The sum of Shinji, Asuka, and Rei's killcounts must be 250 or more, or 150 or more if you met the requirement on scenario 45.
*Hi-Nu Gundam
**Amuro and Bright's combined killcounts must be greater than 120 by the end of this scenario.
*Sazabi
**Amuro and Kamille's killcount must be 50 or more each at the end of this scenario. You will receive it at the start of next scenario.
*Strike Rouge IWSP
**If you did not receive it on Scenario 45, the sum of Cagalli, Julie, Mayura, and Asagi's killcounts must be 100 or more by the end of the scenario.
*Destroid Monster
**If you did not receive it on Scenario 31, the sum of Fokker, Hikaru, and Kakizaki's killcounts must be 100 or more by the end of this scenario.
'''Unit Acquisition:'''
*Evangelion Unit 0 (Kaowru)
*Evangelion Unit 0 loses the "Lance of Longinus" attack

|-
| colspan="3" class="fc-prologue" |'''Beyond this point, losing Ideon results in a Game Over'''
|-
| colspan="3" class="fc-std-sc" |'''第５３話：出航！銀河殴り込み艦隊！ Scenario 53 - The Galactic Assault Fleet Takes Sail!'''

|-
| colspan="3" |'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' 230 enemy units shot down by turn 7. '''Secret Requirements:''' '''Unit Acquisition:'''
*All secret units and parts are given after the stage begins <ul><li>Neue Ziel OR Val Varo OR Gerbera Tetra</li><li>Quin Mantha OR Haman's Qubeley OR Mass Production Qubeley (x2)</li><li>Doven Wolf OR Geymalk</li><li>Strike Rougue IWSP</li><li>Hi-Nu Gundam</li><li>Sazabi</li><li>Destroid Monster</li><li>F-Type Equipment for Evangelion Unit 1</li><li>Atomic Bazooka parts for GP-02</li><li>Heavy Weapon System for Nu Gundam</li><li>Full Armor Parts for ZZ Gundam</li></ul>
*MP Nu Gundam
**Fin Funnel parts for MP Nu Gundam
*Gunbuster adds Kazumi as a Subpilot
**Gunbuster gains the "Super Inazuma Kick" attack
*Ra Cailum gains the "Nuclear Missile" MAP and ALL attacks

|-
| colspan="3" class="fc-std-sc" |'''第５４話：神に守られし星 Scenario 54 - The Planet Guarded by the Gods'''

|-
| colspan="3" |'''Victory Condition:'''
*1st Part: (1) Defeat all enemies; (2) The SRX Team rescues [https://akurasu.net/wiki/Super_Robot_Wars/Alpha_3/Info_Dump#Finding_Aya_on_Scenario_54 Aya]; (3) Jumora is defeated
*2nd Part: Bemidoban is defeated
'''Defeat Condition:'''
*1st Part: (1)(2) Ally battleship is defeated, Ryusei or Viletta are defeated; (3) Ally battleship is defeated, Ryusei, Viletta, Baran, or Lyria are defeated
*2nd Part: Sanger is defeated
**2nd Part (Touma Route): Touma is defeated
'''Skill Point:''' Clear the map within 10 turns, with both Hermoz defeated '''Secret Requirements:''' '''Unit Acquisition:'''
*Banpreios adds Aya as a Subpilot
**Branpreios gains the "Tenjou Tenge Nendou Musou-ken" attack
**Branpreios and R-GUN Powered gain the "Tenjou Tenge Ichigeki Hissatsu-ho" combination attack
*Shumel (Lyria)
*Bemidoban (Baran)

|-
| colspan="3" class="fc-std-sc" |'''第５５話：まつろわぬ神 Scenario 55 - The God Who Resists Order'''

|-
| colspan="3" |'''Victory Condition:'''
*1st Part: (1) Defeat all enemies; (2) Defeat Gebel GanEden
*2nd Part: (1) Defeat all enemies; (2) Defeat Gebel GanEden
'''Defeat Condition:'''
*1st Part: (1)(2) Ally battleship is defeated
*2nd Part: (1)(2) Ally battleship is defeated
'''Skill Point:''' Within 6 turns, defeat both Zfiruds '''Secret Requirements:''' '''Unit Acquisition:'''

|-
| colspan="3" class="fc-std-sc" |'''第５６話：終わりなき総力戦 Scenario 56 - Unending Total War'''

|-
| colspan="3" |'''Victory Condition:'''
*1st Part: Drowa Zan is defeated within 5 turns
*2nd Part: (1) Soloship move next to the Bairal Jinn; (2) Any unit reaches the designated point
'''Defeat Condition:'''
*1st Part: Ally battleship is defeated, 6th turn is reached
*2nd Part: (1)(2) Ally battleship is defeated
'''Skill Point:''' Clear the map within 7 turns. '''Secret Requirements:'''
*Gije & Ganga Rube
**You must pick the Fight The Buff Clan option at the end of the scenario.
*Bad Ending Route
**On New Game+, choose to fight (first option)
'''Unit Acquisition:'''

|- class="fc-route-h"
| width="40%" |'''Fight The Buff Clan''' Ideon, Getter Robo Combattler V, Voltes V, Daimos Daitarn 3 Gundam (0083, Zeta, ZZ, CCA, Wing, SEED)
| width="40%" |'''Fight The STMC''' Mazinger (Z, Great), Steel Jeeg, Raiden Goshogun, Dancouga, Gaiking Macross (DYRL, Plus, 7) Gunbuster, Evangelion, GaoGaiGar Virtual On
| width="20%" |'''Bad Ending '''

|-
| class="fc-route1" |'''第５７話：憎しみの環の中で Scenario 57 - In a Circle of Hatred'''
| class="fc-route3" |'''第５７話：終わりの始まり Scenario 57 - The Beginning of the End'''
| class="fc-prologue" |'''イデ発動ルート最終話：銀河に君と''' '''Ide Activation Final Scenario - With You In The Galaxy'''

|-
|'''Victory Condition:'''
*1st Part: (1) Defeat all enemies; (2) Soloship reaches the designated point
*2nd Part: Defeat all enemies within (11 (E) / 9 (N) / 7 (H)) turns
'''Defeat Condition:'''
*1st Part: (1)(2) All allies are defeated
*2nd Part: Turn (12 (E) / 10 (N) / 8 (H)) is reached, Ally battleship is defeated
'''Skill Point:''' Defeat all enemies within (10 (E) / 8 (N) / 6 (H)) turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Ganga Rube (Gije)

|'''Victory Condition:''' (1)(2) Defeat all enemies '''Defeat Condition:''' (1) Eltrium is defeated; (2) Ally battleship is defeated '''Skill Point:''' Defeat all enemies within 7 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Eltrium (Tashiro, Deputy Chief)

| rowspan="4" |'''Victory Condition:''' Bairal Jinn is defeated '''Defeat Condition:''' Ally battleship is defeated '''Secret Requirements:''' '''Unit Acquisition:'''

|-
| class="fc-route1" |'''第５８話：発動 Scenario 58 - Activation'''
| class="fc-route3" |'''第５８話：死闘、未来を懸けて Scenario 58 - The Mortal Struggle for the Future'''

|-
|'''Victory Condition:'''
*1st Part: Bairal Jinn is defeated
*2nd Part: Bairal Jinn is defeated
'''Defeat Condition:'''
*1st Part: Ally battleship is defeated
*2nd Part: Ally battleship is defeated
'''Skill Point:''' Destroy the Bairal Jinn within six turns. '''Secret Requirements:''' '''Unit Acquisition:'''

|'''Victory Condition:''' (1)(2) Defeat all enemies '''Defeat Condition:''' (1) Ally battleship is defeated; Drowa Zan is defeated, Ally battleship is defeated(2) '''Skill Point:''' All Buff Clan units survive the stage. '''Secret Requirements:''' '''Unit Acquisition:'''

|}
 

==Stages 59 - END==
{| width="100%"
|-
| colspan="2" class="fc-std-sc" |'''第５９話：果てしなき流れの果てに Scenario 59 - At the End of the Unending Flow'''

|-
| colspan="2" |'''Victory Condition:'''
*1st Part: Reach the 11th turn
*2nd Part: Defeat all enemies, 6th turn is reached
'''Defeat Condition:'''
*1st Part: Ally battleship is defeated, Any enemy enters the designated area
*2nd Part: Any enemy enters the designated area, Ally battleship is defeated, Noriko or Jung are defeated
'''Skill Point:''' Defeat all enemies within 5 turns. '''Secret Requirements:''' '''Unit Acquisition:'''

|- class="fc-route-h"
| width="50%" |'''Normal Ending - 56 Skill Points or less, OR turn count 421 or more'''
| width="50%" |'''Good Ending - 57 Skill Points or more AND turn count 420 or less'''

|-
| class="fc-route1" |'''最終話: 終焉の銀河 Final Scenario - A Galaxy of Death'''
| class="fc-route3" |'''最終話: 今遥か遠い彼方… Final Scenario - Now, The Faraway Yonder'''

|-
|'''Victory Condition:''' (1) ??? is destroyed; (2) Kaiser Ephres is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated '''Secret Requirements:''' '''Unit Acquisition:'''

|'''Victory Condition:''' (1) ??? is destroyed; (2)(3) Kaiser Ephres is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated; (3) Irui is defeated '''Secret Requirements:''' '''Unit Acquisition:'''
*Nashim Gan Eden (Irui)

|}

Super Robot Wars/Alpha 3/Flow Chart

2023-06-09T13:23:46Z

KomodoWork: /* Stages 34 - 44 */ J-Ark added

Units and Pilots in Black join your team. 
Units and Pilots in Orange are available for that stage, then leave. 
Units and Pilots in Blue have special requirements. Check the [[../Secrets|Secrets]] page for more details. 
Units and Pilots in Red previously joined, but from this point, are rendered unusable. Those lost permanently are marked so, while others rejoin later on. 
Information in Green are upgrades for units already in your party.

==Stages 01 - 18==
{| width="100%"
|- class="fc-route-h"
| width="25%" |'''Touma Route'''
| width="25%" |'''Kusuha Route'''
| width="25%" |'''Cobray Route'''
| width="25%" |'''Selena Route'''

|-
| class="fc-route1" |'''第１話：闘志、炎に燃ゆる Scenario 1 - Within the Flames, Fighting Spirit Rises'''
| class="fc-route2" |'''第１話：出撃！鋼の龍虎 Scenario 1 - Launch! Dragon and Tiger of Steel'''
| class="fc-route3" |'''第１話：虚空からの転生 Scenario 1 - Reincarnated from the Void'''
| class="fc-route4" |'''第１話：シークレット・ミッション Scenario 1 - Secret Mission'''

|-
|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Any allied unit is defeated '''Skill Point:''' Defeat all enemies in 3 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Raioh (Touma)
*GaoGaiGar (Guy)
*Goldymarg (Goldymarg)
*HyoRyu (HyoRyu)
*EnRyu (EnRyu)

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Any allied unit is defeated '''Skill Point:''' Defeat all enemies in 2 turns '''Secret Requirements:'''
*Bullet
**You must be playing as Kusuha to recruit Bullet.
'''Unit Acquisition:'''
*Gouryu Kai (Kusuha)
*Raikou Kai (Bullet)
*Mazinkaiser (Kouji)
*Diana A (Sayaka)
*Shin Getter (Ryoma, Hayato, Benkei)
*Lady Command (Michiru)

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' (1) Werkbau is defeated; (2) Werkbau is defeated, ally battleship is defeated '''Skill Point:''' Defeat all enemies in 5 turns after enemy reinforcements show up '''Secret Requirements:'''
*Arado and Seolla
**You must be playing as Cobray to recruit Arado and Seolla.
'''Unit Acquisition:'''
*Werkbau (Cobray)
*Nu Gundam (Amuro)
*Ra Cailum (Bright, Torres)
*MP Nu Gundam (Kayra)
*Jegan (Katz)
*Incom & Funnel parts for MP Nu Gundam

|'''Victory Condition:''' (1) All enemies except Salamis Kai shot down; (2) R-Gun Powered shot down '''Defeat Condition:''' (1) Selena shot down, Salamis Kai shot down; (2) Selena shot down '''Skill Point:''' Defeat all enemies except the Salamis Kai in 4 turns '''Secret Requirements:'''
*Ibis and Slay
**You must be playing as Selena to recruit Ibis and Slay.
'''Unit Acquisition:'''
*AS Soleares (Selena, Elma)
*Albion (Synapse, Paserov)
*GP03 Dendrobium (Kou)
*GM Cannon II (Keith)
*GM Custom (Burning)
*GM Custom (Bate)
*GM Custom (Monsha)
*GM Cannon II (Adel)
*Zeta Gundam (Kamille)
*Re-GZ BWS (Four)
*Methuss (Fa)
*Super Gundam (Emma)
*Armed Fortress Orchis parts for Gundam Stamen
*G Defensor parts for Gundam Mk-II

|-
| class="fc-route1" |'''第２話: さらばGGG、さらば勇者 Scenario 2 - Farewell, GGG! Farewell, Braves!'''
| class="fc-route2" |'''第２話: 新たなる侵略者！立ち上がれV Scenario 2 - New Invaders! Rise Up, V!'''
| class="fc-route3" |'''第２話: 血の狼煙 Scenario 2 - Beacon Fire of Blood'''
| class="fc-route4" |'''第２話: フラッシュ・デイ Scenario 2 - Flash Day'''

|-
|'''Victory Condition:''' Defeat all enemies; Defeat ZX-01 '''Defeat Condition:''' Any allied unit is defeated '''Skill Point:''' Defeat the 4 Zonders in 2 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*GaoGaiGar (Guy)
*J-Der (J, Tomoro)
*Great Mazinger (Tetsuya)
*Venus A (Jun)
*Boss Borot (Boss, Nuke, Mucha)
*Kotetsu Jeeg (Jeeg)
*Big Shooter (Miwa)

|'''Victory Condition:''' (1) Defeat all enemies, (2) Defeat Dangel '''Defeat Condition:''' (1) Hyouma defeated (2) Any Allied Unit is defeated '''Skill Point:''' Defeat all enemies in 3 turns, do not lose any Federation Army squads '''Secret Requirements:''' '''Unit Acquisition:'''
*Combattler V (Hyoma, Juzo, Daisaku, Chizuru, Kosuke)
*Jegan (Federation Soldier) x 3

|'''Victory Condition:''' (1) Defeat the Magellan Kai-class Battleship (2) Defeat the Magellan Kai-class Battleship and Nuclear Missiles '''Defeat Condition:''' (1) Any ally unit is defeated (2) Nuclear Missiles reach the marked area on the map '''Skill Point:''' Defeat the enemy missiles and battleship in 7 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Clop-class (Federation Captain)
*Wildfalken (Seolla)
*MP Nu Gundam (Cobray)
*ZZ Gundam (Judau)
*Re-GZ BWS (Roux)
*Albion (Synapse, Paserov)
*GP03 Dendrobium (Kou)
*GM Cannon II (Keith)
*GM Custom (Burning)
*GM Custom (Bate)
*GM Custom (Monsha)
*GM Cannon II (Adel)
*Zeta Gundam (Kamille)
*Re-GZ BWS (Four)
*Methuss (Fa)
*Super Gundam (Emma)
*Armed Fortress Orchis parts for Gundam Stamen
*G Defensor Parts for Gundam Mk-II

|'''Victory Condition:''' Defeat any enemy battleship '''Defeat Condition:''' (1) Allied battleship is defeated; (2) Allied battleship is defeated, Selena is defeated '''Skill Point:''' Defeat the enemy battleship in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*ZZ Gundam (Judau)
*Re-GZ BWS (Roux)
*Nu Gundam (Amuro)
*Ra Cailum (Bright)
*Jegan (Katz)
*MP Nu Gundam (Keyra)
*AS Soleares (Selena, Elma)
*Incom & Funnel parts for MP Nu Gundam

|-
| colspan="4" class="fc-std-sc" |'''第３話: 逆襲！機界31原種 Scenario 3 - Counterattack! The 31 Machine Primevals!'''

|-
| colspan="4" |'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' (1) Ally battleship is defeated, One of the Machine Primevals reaches the edge of the map; (2) Ally battleship is defeated, One of the Machine Primevals reaches the edge of the map, J is defeated '''Skill Point:''' Defeat all enemies in 6 turns '''Secret Requirements:''' '''Unit Acquisition (Touma & Kusuha):'''
*J-Ark (J, Tomoro)
*Nu Gundam (Amuro)
*Ra Cailum (Bright, Torres)
*Jegan (Katz)
*MP Nu Gundam (Keyra)
*Albion (Synapse, Paserov)
*GP03 Dendrobium (Kou)
*GM Cannon II (Keith)
*GM Custom (Burning)
*GM Custom (Bate)
*GM Custom (Monsha)
*GM Cannon II (Adel)
*Zeta Gundam (Kamille)
*Re-GZ BWS (Four)
*Methuss (Fa)
*Super Gundam (Emma)
*Incom & Funnel parts for MP Nu Gundam
*Armed Fortress Orchis parts for Gundam Stamen
*G Defensor Parts for Gundam Mk-II
'''Unit Acquisition (Cobray & Selena):'''
*J-Ark (J, Tomoro)
*Mazinkaiser (Kouji)
*Diana A (Sayaka)
*Great Mazinger (Tetsuya)
*Venus A (Jun)
*Combattler V (Hyoma, Juzo, Daisaku, Chizuru, Kosuke)
*Koutetsu Jeeg (Jeeg)
*Big Shooter (Miwa)
*Shin Getter (Ryoma, Hayato, Benkei)
*Lady Command (Michiru)

|-
| colspan="4" class="fc-std-sc" |'''第４話：地獄門、開く Scenario 4 - The Gates of Hell Open'''

|-
| colspan="4" |'''Victory Condition:'''
*1st Part: Allied Battleship reaches the escape point in 5 turns, All Enemies are defeated in 5 turns
*2nd Part: Defeat all enemies
'''Defeat Condition:'''
*1st Part: Allied Battleship is defeated, Turn 6 starts
*2nd Part: SRX is defeated
'''Skill Point:''' Defeat all enemies in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*SRX (Damaged) (Ryuusei, Rai, Aya)

|-
| colspan="4" class="fc-std-sc" |'''第５話: 地球圏絶対防御線 Scenario 5 - The Earth Sphere’s Absolute Defense Line'''

|-
| colspan="4" |'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' (1) Ally battleship is defeated (2) Any allied unit is defeated '''Skill Point:''' Clear the stage in 6 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Mobieus Zero (Mwu)
*All Char's Counter Attack, Stardust Memory, and Zeta Gundam units are lost <ul><li>Nu Gundam(Amuro)</li><li>Ra Cailum (Bright, Torres)</li><li>MP Nu Gundam (Keyra)</li><li>Albion (Synapse, Paserov)</li><li>GP03 Dendrobium (Kou)</li><li>GM Cannon II (Keith)</li><li>GM Custom (Burning)</li><li>GM Custom (Bate)</li><li>GM Custom (Monsha)</li><li>GM Cannon II (Adel)</li><li>Zeta Gundam (Kamille)</li><li>Re-GZ BWS (Four)</li><li>Methuss (Fa)</li><li>Super Gundam (Emma)</li><li>Jegan (Katz)</li></ul>

|- class="fc-route-h"
|'''Touma Route''' Great Mazinger, Venus A, Boss Borot Steel Jeeg, Big Shooter
|'''Kusuha Route''' Getter Robo G, Lady Command Mazinger Z, Diana A Combattler V
|'''Cobray Route''' ZZ Gundam, ReGZ (BWS) Mobieus Zero
|'''Selena Route'''
|-
| class="fc-route1" |'''第６話：平和、遥か遠く Scenario 6 - A Faraway Peace'''
| class="fc-route2" |'''第６話：北米戦線、異常アリ Scenario 6 - Abnormalities on the North American Front'''
| class="fc-route3" |'''第６話：GUNDAM出撃 Scenario 6 - Gundam, Sortie'''
| class="fc-route4" |'''第６話：ザ・ビギニング Scenario 6 - The Beginning'''

|-
|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Any ally is defeated '''Skill Point:''' Defeat all enemies in 5 turns; Defeat the Yamata no Orochi last '''Secret Requirements:''' '''Unit Acquisition:'''
*GaiGar (Gai)
*Mic Sounders XIII (Mic Sounders XIII)

|'''Victory Condition:''' (1) Ally reaches the designated area; (2) Defeat all enemies '''Defeat Condition:''' Any ally defeated '''Skill Point:''' Reach target location without engaging in combat '''Secret Requirements:''' '''Unit Acquisition:'''
*Mazinkaiser → Mazinger Z (Kouji)
*Shin Getter Robo → Getter Robo G (Ryoma, Hayato, Benkei) 
*Dancouga (Shinobu, Sara, Masato, Ryo)

|'''Victory Condition:'''
*1st Part: Sigu is defeated, Vesalius is defeated
*2nd Part: Defeat all enemies 
'''Defeat Condition:'''
*1st Part: Any ally is defeated
*2nd Part: Any ally is defeated 
'''Skill Point:''' Accomplish either objective in 4 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Clop Class Battleship (Federation Officer)
*Wing Gundam Zero Kai (Heero)
*Gundam Deathscythe Hell Kai (Duo)
*Gundam Sandrock Kai (Quatre)
*Taurus (Hilde)
*Strike Gundam (Kira)

|'''Victory Condition:''' (1) AS Soleares reaches the designated point in 4 turns; (2) Defeat all enemies '''Defeat Condition:''' (1) Begin turn 5 without meeting victory conditions, Any ally is defeated; (2) Any ally is defeated '''Skill Point:''' Defeat all enemies in 4 turns and get the AS Soleares to the target square '''Secret Requirements:''' '''Unit Acquisition:'''
*CGUE (Rau)
*GINN (ZAFT Soldier) x 2
*Vesarius (Ades)

|-
| class="fc-route1" |'''第７話：燃えろ宙！妖花フローラの挑戦 Scenario 7 - Space Burns! The Enchanting Flora’s Challenge!'''
| class="fc-route2" |'''第７話：怒りの獣、野生の咆哮 Scenario 7 - The Wild Roar of the Raging Beast'''
| class="fc-route3" |'''第７話：崩壊の大地 Scenario 7 - Collapsing Land'''
| class="fc-route4" |'''第７話：ワンズ・ジャスティス Scenario 7 - One’s Own Justice'''

|-
|'''Victory Condition:''' 
*1st Part: Defeat all enemies
*2nd Part: Defeat all enemies
'''Defeat Condition:''' 
*1st Part: Any ally defeated
*2nd Part: Any ally defeated
'''Skill Point:''' Defeat all enemies in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*AnRyu (AnRyu)
*KouRyu (KouRyu)

|'''Victory Condition:''' (1) Defeat all enemies; (2) Defeat Dangel '''Defeat Condition:''' Any ally is defeated '''Skill Point:''' Defeat all Zubanzas, Boazan Flying Saucers, and Red Baloms within 4 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Black Wing (Alan)

|'''Victory Condition:''' (1) Defeat all enemies; (2) Archangel reaches the designated point, Defeat all enemies '''Defeat Condition:''' (1) Mwu is defeated; (2) Ally battleship is defeated, Kira or Mwu are defeated '''Skill Point:''' Defeat all enemies in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Strike Gundam (Kira)
*Archangel (Murrue, Natarle)
*Aile, Sword and Launcher Striker packs for Strike Gundam

|'''Victory Condition:''' Any ally reaches the designated point '''Defeat Condition:''' Any ally is defeated '''Skill Point:''' Defeat all enemies in 5 turns and get an allied unit to the target square '''Secret Requirements:''' '''Unit Acquisition:'''
*Altron Gundam (Wufei)
*Gundam Heavyarms Kai (Trowa)
*CGuE (Rau)
*Vesarius (Ades)
*Aegis Gundam (Athrun)
*Blitz Gundam (Nicol)
*Buster Gundam (Dearka)
*Duel Gundam (Yzak)

|-
| class="fc-route1" |'''第８話：立ち上がれ！勇気ある者達 Scenario 8 - Stand Up, People of Courage!'''
| class="fc-route2" |'''第８話：輝け！不死身の勇者 Scenario 8 - Shine, Undying Hero!'''
| class="fc-route3" |'''第８話：誘う声 Scenario 8 - An Inviting Voice'''
| class="fc-route4" |'''第８話：インビジブル・イントルーダー Scenario 8 - Invisible Intruder'''

|-
|'''Victory Condition:''' (1) Defeat all enemies; (2) ZX-02 is defeated '''Defeat Condition:''' (1) Any ally is defeated; (2) Gai is defeated, J is defeated '''Skill Point:''' Defeat all enemies in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*GaiGar → GaoGaiGar
*Mic Sounders XIII gains "Disc P", "Disc M", and "Disc X" attacks
*Goldymarg (Goldymarg)
*HyoRyu (HyoRyu)
*EnRyu (EnRyu)
*Big Volfogg (Big Volfogg)

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' (1) Any ally is defeated; (2) Akira is defeated '''Skill Point:''' Defeat the Bramble (retreats at 4000HP (E) / 6000HP (N) / 8000HP (H)) '''Secret Requirements:''' '''Unit Acquisition:'''
*Raideen (Akira)
*Bluegar (Jinguji, Mari)

|'''Victory Condition:'''
*1st Part: (1) Vesalius is defeated; (2) Defeat all enemies
*2nd Part: (1) Defeat all enemies; (2) Defeat all enemies except Valk Baal 
'''Defeat Condition:'''
*1st Part: Ally battleship is defeated, Seolla or Cobray are defeated
*2nd Part: Any ally is defeated 
'''Skill Point:''' Defeat Aegis, Duel, Buster, and Blitz Gundams in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Zeta Gundam (Kamille)
*Re-GZ BWS (Four)
*Methuss (Fa)
*Super Gundam (Emma)
*Ra Cailum (Bright, Torres)
*MP Nu Gundam (Cobray)
*Werkbau (Cobray)
*G Defensor parts for Gundam Mk-II

|'''Victory Condition:''' Reach turn 6 '''Defeat Condition:''' Any ally is defeated '''Skill Point:''' Defeat all the Jegans '''Secret Requirements:''' '''Unit Acquisition:'''
*CGuE (Rau)
*Vesarius (Ades)
*Aegis Gundam (Athrun)
*Blitz Gundam (Nicol)
*Buster Gundam (Dearka)
*Duel Gundam (Yzak)

|-
| class="fc-route1" |'''第９話：内なる修羅 Scenario 9 - Demons of War Within'''
| class="fc-route2" |'''第９話：再会！ニューヨーク解放戦 Scenario 9 - Reunion! The Battle to Retake New York'''
| class="fc-route3" |'''第９話：正義の在処 Scenario 9 - Where Justice Can Be Found'''
| class="fc-route4" |'''第９話：アベンジャー Scenario 9 - Avenger'''

|-
|'''Victory Condition:''' (1) Defeat all enemies; (2) Defeat Raioh '''Defeat Condition:''' (1) Any ally defeated; (2) Sanger is defeated '''Skill Point:''' Defeat the Bramble in 4 turns (retreats at 4000HP (E) / 6000HP (N) / 8000HP (H)) '''Secret Requirements:''' '''Unit Acquisition:'''
*Dygenguar (Sanger)
*Huckebein Mk-III Trombe (Ratsel)
*Raideen (Akira)
*Bluegar (Jingunji, Mari)
*Mazinger Z (Kouji)
**Mazinger Z (Kouji) and Great Mazinger (Tetsuya) gain the "Double Mazinger Blade" and "Double Burning Fire" combination attacks
*Diana A (Sayaka)
*Getter Robo G (Ryoma, Hayato, Benkei)
*Lady Command (Michiru)
*Combattler V (Hyoma, Juzo, Daisaku, Chizuru, Kosuke)

|'''Victory Condition:''' (1) Defeat all enemies; (2) Dancouga reaches the designated point; (3) Defeated Deathgaia, Dangel, and Warchamedes '''Defeat Condition:''' (1) Shinobu, Kusuha, or Bullet are defeated; (2) Shinobu, Kusuha, Bullet, or Alan are defeated; (3) Alan is defeated '''Skill Point:''' Clear the map in 8 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Black Wing (Alan)
*Dygenguar (Sanger)
*Huckebein Mk-III Trombe (Ratsel)

|'''Victory Condition:''' (1) Vesalius is defeated; Reduce the Muge Battleship under 2000 HP before it reaches the edge of the map '''Defeat Condition:''' (1) Ally battleship is defeated; (2) Muge Battleship reaches the western edge of the map '''Skill Point:''' Defeat all enemies before reducing the Muge Mothership's HP below 2000 or defeating it '''Secret Requirements:''' '''Unit Acquisition:'''

|'''Victory Condition:''' (1) Reduce the Archangel's HP to 50% or less, Defeat all enemies besides the Archangel; (2) Reduce the Varuch Ishar to 4000 HP or less. '''Defeat Condition:''' Any ally is defeated '''Skill Point:''' Defeat the Varuch Ishar (flees at 4000 HP) '''Secret Requirements:''' '''Unit Acquisition:'''
*CGuE (Rau)
*Vesarius (Ades)
*Aegis Gundam (Athrun)
*Blitz Gundam (Nicol)
*Buster Gundam (Dearka)
*Duel Gundam (Yzak)

|-
| class="fc-route1" |'''第１０話：激震の地底帝国 Scenario 10 - Tremors in the Underground Empire'''
| class="fc-route2" |'''第１０話：龍を喰らうもの Scenario 10 - That Which Devours the Dragon'''
| class="fc-route3" |'''第１０話：消えていく光 Scenario 10 - The Fading Light'''
| class="fc-route4" |'''第１０話：グッバイ・フレンズ Scenario 10 - Goodbye, Friends'''

|-
|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' All allies defeated, Science Fortress Lab destroyed '''Skill Point:''' Clear the map without the Science Fortress Lab taking damage '''Secret Requirements:''' '''Unit Acquisition:'''
*Raioh loses the "System LIOH" ability
*Raioh gains the "Rising Meteor" attack
*Dygenguar (Sanger)
*Huckebein Mk-III Trombe (Ratsel)

|'''Victory Condition:''' (1) Sanger is defeated; (2)(3) Defeat all enemies; (4)(5) ZX-02 is defeated '''Defeat Condition:''' (1) Bullet is defeated; (2) Sanger or Rastel are defeated; (3) Any ally is defeated; (4) Guy, Sanger, or Rastel are defeated; (5) Guy, J, Sanger, or Rastel are defeated '''Skill Point:''' Reduce Shin RyuOuKi to below 10000 HP within 3 turns of its arrival '''Secret Requirements:''' '''Unit Acquisition:'''
*Dygenguar (Sanger)
*Huckebein Mk-III Trombe (Ratsel)
*GaiGar (Guy)
*GaoGaiGar (Guy)
*Mic Sounders XIII (Mic Sounders XIII)
*Goldymarg (Goldymarg)
*HyoRyu (HyoRyu)
*EnRyu (Enryu)
*Volfogg (Volfogg)
*Great Mazinger (Tetsuya)
*Venus A (Jun)
*Boss Borot (Boss, Mucha, Nuke)
*Kotetsu Jeeg (Jeeg)
*Big Shooter (Miwa)
*Stealth Gao II parts for GaoGaiGar
*Gunbot parts for Volfogg

|'''Victory Condition:''' (1) Reduce the Blitz Gundam to under 7000HP; (2) The Gamow is defeated; (3) The Gamow is defeated and Imperial Guard are defeated '''Defeat Condition:''' (1)(2) Any ally is defeated; (3) Ally battleship is defeated '''Skill Point:''' Defeat the Gamow (retreats at 4000HP (E) / 6000HP (N) / 8000HP (H)) '''Secret Requirements:''' '''Unit Acquisition:'''
*Qubeley Mk-II (Puru)
*Qubeley Mk-II (Puru Two)
*Hyaku Shiki (Beecha)
*Gundam Mk-II (Elle)
*Jegan (Mondo)
*Megarider (Iino)
*YF-19 (Isamu)
*YF-21 (Guld)

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' (1) Any ally is defeated; (2) Ally battleship is defeated; (3) Ally battleship is defeated, Isamu or Guld are defeated '''Skill Point:''' Clear the map in 6 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Zeta Gundam (Kamille)
*Methuss (Fa)
*ReGZ (Four)
*Super Gundam (Emma)
*Mobius Zero (Mwu)
*Wing Gundam Zero Kai (Heero)
*Gundam Sandrock Kai (Quatre)
*Gundam Deathscythe Hell Kai (Duo)
*Taurus (Hilde)
*ZZ Gundam (Judau)
*ReGZ BWS (Roux)
*Qubeley Mk-II (Puru)
*Qubeley Mk-II (Puru Two)
*Hyaku Shiki (Beecha)
*Gundam Mk-II (Elle)
*Jegan (Mondo)
*Megarider (Iino)
*YF-19 (Isamu)
*YF-21 (Guld)

|-
| class="fc-route1" |'''第１１話：戦場の邂合、そして決別 Scenario 11 - An Battlefield Encounter, and Then a Departure'''
| class="fc-route2" |'''第１１話：新たなる人類 Scenario 11 - A New Mankind'''
| class="fc-route3" |'''第１１話：君と戦場で Scenario 11 - On the Battlefield with You'''
| class="fc-route4" |'''第１１話：パワー・ジャンクション Scenario 11 - Power Junction'''

|-
|'''Victory Condition:''' (1) Defeat all enemies; (2) Defeat Vesalius '''Defeat Condition:''' Ally battleship is defeated, Kira or Mwu are defeated '''Skill Point:''' Defeat all enemies in 7 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Archangel (Murrue)
*Strike Gundam (Kira)
*Moebius Zero (Mwu)
*Stealth Gao II Parts for GaoGaiGar
*Aile, Sword, and Launcher Striker packs for Strike Gundam

|'''Victory Condition:''' (1) Defeat all enemies; (2) Vesalius is defeated '''Defeat Condition:''' (1) Ally battleship is defeated, Kira or Mwu are defeated; (2) Ally battleship is defeated '''Skill Point:''' Defeat all enemies in 7 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Strike Gundam (Kira)
*Mobeius Zero (Mwu)
*Archangel (Murrue, Natarle)
*YF-19 (Isamu)
*YF-21 (Guld)
*Aile, Sword, and Launcher Striker packs for Strike Gundam

|'''Victory Condition:''' (1) Defeat all enemies (2) ZX-02 is defeated '''Defeat Condition:''' (1) Kira is defeated; (2) Any ally is defeated '''Skill Point:''' Defeat all enemies in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Wildburger (Arado)
*Great Mazinger (Tetsuya)
*Venus A (Jun)
*Boss Borot (Boss)
*Dancouga (Shinobu, Sarah, Masato, Ryo)
*Raideen (Akira)
*Bluegar (Jingunji)
*Mazinger Z (Kouji)
*Diana A (Sayaka)
*Getter Robo G (Ryoma, Hayato, Benkei)
*Lady Command (Michiru)
*Star Gaogaigar (Gai)
*Goldymarg (Goldymarg)
*Mic Sounders the 13th (Mic)
*Hyoryu (Hyoryu)
*Enryu (Enryu
*Big Volfogg (Volfogg)

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Defeat all enemies in 7 turns '''Secret Requirements:''' '''Unit Acquisition:'''

|-
| class="fc-route1" |'''第１２話：守るべきモノ Scenario 12 - What You Must Protect'''
| class="fc-route2" |'''第１２話：別れの宇宙 Scenario 12 - Farewells in Space'''
| class="fc-route3" |'''第１２話：ディーンの火 Scenario 12 - The Flames of Deen'''
| class="fc-route4" |'''第１２話：コンクルージョン Scenario 12 - Conclusion'''

|-
|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' All enemies defeated '''Skill Point:''' Defeat all enemies in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Gundam Wing Zero (Heero)
*Gundam Deathscythe Hell Kai (Duo)
*Gundam Sandrock Kai (Quatre)
*Gundam Heavyarms Kai (Trowa)
*Altron Gundam (Wufei)
*Taurus (Hilde)
*Zeta Gundam (Kamille)
*Re-GZ BWS (Four)
*Methuss (Fa)
*Gundam Mk-II (Emma)
*ZZ Gundam (Judau)
*Qubeley Mk-II (Puru)
*Qubeley Mk-II (Puru Two)
*Hyaku Shiki (Beecha)
*Gundam Mk-II (Elle)
*Jegan (Mondo)
*Megarider (Iino)
*YF-19 (Isamu) (After stage)
*YF-21 (Guld) (After stage)
*G Defensor parts for Gundam Mk-II

|'''Victory Condition:''' (1) Defeat all enemies; (2) Defeat Shin RyoOhKi; (3) Defeat the Imperial Guard '''Defeat Condition:''' (1)(2) Any ally is defeated; (3) Ally battleship is defeated '''Skill Point:''' Defeat Shin RyuOhKi before Victory Conditions are met '''Secret Requirements:''' '''Unit Acquisition:'''
*Gundam Wing Zero Kai (Heero)
*Gundam Deathscythe Hell Kai (Duo)
*Gundam Sandrock Kai (Quatre)
*Gundam Heavyarms Kai (Trowa)
*Altron Gundam (Wufei)
*Taurus (Hilde)
*Zeta Gundam (Kamille)
*Re-GZ BWS (Four)
*Methuss (Fa)
*Gundam Mk-II (Emma)
*ZZ Gundam (Judau)
*Qubeley Mk-II (Puru)
*Qubeley Mk-II (Puru Two)
*Hyaku Shiki (Beecha)
*Gundam Mk-II (Elle)
*Jegan (Mondo)
*Megarider (Iino)
*G Defensor parts for Gundam Mk-II

|'''Victory Condition:''' (1) Bramble, Magnum, and Zangaioh are defeated; (2) Defeat all enemies; (3) Defeat Valk Baal '''Defeat Condition:''' (1) Ally battleship is defeated, Arado is defeated; (2) Cobray, Arado or Seolla are defeated; (3) Cobray, Viletta, Sanger, or Rastel are defeated '''Skill Point:''' Clear the map in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Werkbau gains the "Axion Buster" attack
*Gundam Heavyarms Kai (Trowa)
*Altron Gundam (Wufei)
*Dygenguar (Sanger)
*Huckebein Mk-III Trombe (Ratsel)
*R-GUN Powered (Viletta)

|'''Victory Condition:''' (1)(2) ZX-08 is defeated; (3) Varuch Ishar is defeated '''Defeat Condition:''' (1) Ally battleship is defeated, (2) Ally battleship is defeated, J is defeated; (3) Ally battleships is defeated, Selena, Viletta, Sanger, or Rastel are defeated '''Skill Point:''' Defeat ZX-02 in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*J-ARK (J, Tomoro)
*R-GUN Powered (Viletta)
*Dygenguar (Sanger)
*Huckebein Mk-III Trombe (Ratsel)
*Vegalion (Slay)

|-
| colspan="4" class="fc-std-sc" |'''第１３話：もう一度、自らの足で Scenario 13 - Once Again, On Your Feet'''

|-
| colspan="4" |'''Victory Condition:''' ZX-06 is defeated '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Clear the map in 6 turns; Defeat all other enemies before ZX-06 '''Secret Requirements:''' '''Unit Acquisition:'''
*Evangelion Unit 0 Custom (Rei)
*Evangelion Unit 1 (Shinji)
*Evangelion Unit 2 (Asuka)

|-
| colspan="4" class="fc-std-sc" |'''第１４話：オペレーション・ハルパー Scenario 14 - Operation Harper'''

|-
| colspan="4" |'''Victory Condition:''' Reduce Hermoz Ehad's HP to below 120000HP (E) / 90000HP (N) / 80000HP (H) '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Achieve the victory condition in 7 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*HyoRyu (HyoRyu)
*EnRyu (EnRyu)

|-
| colspan="4" class="fc-std-sc" |'''第１５話：遥かなる凱歌 Scenario 15 - A Faroff Victory Song'''

|-
| colspan="4" |'''Victory Condition:''' Defeat the Combine Primeval '''Defeat Condition:''' Ally Battleship is defeated, J is defeated '''Skill Point:''' Defeat all enemies in 7 turns, leaving the combined Primeval for last '''Secret Requirements:''' '''Unit Acquisition:'''
*J-Ark (J, Tomoro)
*ALL units are unavailable until clearing Scenario 18

|-
| colspan="4" class="fc-std-sc" |'''第１６話：導かれる魂、銀河で Scenario 16 - Souls Guided by the Galaxy'''

|-
| colspan="4" |'''Victory Condition:'''
*1st Part: Defeat all enemies
*2nd Part: Defeat all enemies
'''Defeat Condition:'''
*1st Part: Ideon is defeated
*2nd Part: Any ally is defeated
'''Skill Point:''' Defeat all enemies in 4 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Ideon (Cosmo, Kasha, Bess → Moera)
*VF-17S Nightmare (Kinryu)
*VF-17D Nightmare (Gamlin)
*VF-17D Nightmare (Docker)
*Battle 7 (Max, Exedore, Miho, Sally)
*Soloship (Bess)

|-
| colspan="4" class="fc-std-sc" |'''第１７話：ディスコード・ハーモニー Scenario 17 - Discord / Harmony'''

|-
| colspan="4" |'''Victory Condition:''' (1)(2) Defeat the Zig Mac; (3) Defeat FZ-109F Elgarthorn '''Defeat Condition:''' (1) Any ally is defeated; (2) Any ally is defeated, Zig Mac moves next to the Soloship (3) '''Skill Point:''' Meet victory the condition in 4 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Battle 7 can now transform into "Enhanced Attack Mode"
*VF-17D Nightmare (Docker)

|-
| colspan="4" class="fc-std-sc" |'''第１８話：銀河流浪 Scenario 18 - Galactic Wandering'''

|-
| colspan="4" |'''Victory Condition:'''
*1st Part: Defeat FZ-109F Elgarthorn
*2nd Part: Defeat Zig Mac
'''Defeat Condition:'''
*1st Part: Any ally is defeated
*2nd Part: Any ally is defeated
'''Skill Point:''' Meet victory conditions in 3 turns '''Secret Requirements:'''
*Duel Gundam
**Take the Earth Route
*VF-1J S Valkyrie
**Take the Earth Route
*LaGOWE
**Take the Earth Route
'''Unit Acquisition:'''
*VF-17D Nightmare (Physica)
*VF-17S (Kinryu), VF-17D (Gamlin), and VF-17D (Physica) gain the "Diamond Force Attack" combination Attack
*Ideon gains the "Omnidirectional Missile" attack
*All Ideon and Macross 7 units are lost <ul><li>Ideon (Cosmo, Kasha, Moera)</li><li>Soloship (Bess)</li><li>Battle 7 (Max, Exedore, Miho, Sally)</li><li>VF-17S Nightmare (Kinryu)</li><li>VF-17D Nightmare (Physica)</li><li>VF-17D Nightmare (Gamlin)</li>

|}
 

==Stages 19 - 33==
{| width="100%"
|- class="fc-route-h"
| width="50%" |'''Descend to Earth''' Gundam 0083 Gundam Z ZZ Gundam Char's CounterAttack Gundam Wing Gundam SEED Macross 7 Macross Plus Evangelion
| width="50%" |'''Mount a Lunar offensive''' GaoGaiGar Ideon Mazinger (Z, Great) Getter Robo Steel Jeeg Combattler V Gaiking Raideen Dancouga GoShogun

|-
| class="fc-route1" |'''第１９話：宇宙に降る星 Scenario 19 - Stars Falling in Space'''
| class="fc-route3" |'''第１９話：悪夢への招待状 Scenario 19 - A Written Invitation to a Nightmare'''

|-
|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated, Kira is defeated '''Skill Point:''' Destroy all enemies in 6 turns '''Secret Requirements:'''
*Duel Gundam
**Destroy Yzak.
'''Unit Acquisition:'''
*Nu Gundam (Amuro)
*Jegan (Katz)
*MP Nu Gundam (Kayra)
*Incom and Fin Funnel parts for MP Nu Gundam
*Kira unlocks the SEED pilot skill
*Skygrasper
*Ra Cailum (Bright, Torres)

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Destroy the Muge battleship in 6 turns (retreats at 6000HP (E) / 8000HP (N) / 10000 HP (H)) '''Secret Requirements:''' 
'''Unit Acquisition:'''
*Daiku Maryu (Pete, Midori)
*Gaiking (Sanshiro)
*Skylar (Fan Li)
*Bazolar (Yamagatake)
*Nesser (Bunta)

|-
| class="fc-route1" |'''第２０話：強襲、砂漠の虎 Scenario 20 - Assault of the Desert Tiger'''
| class="fc-route3" |'''第２０話：異邦人達の帰還 Scenario 20 - The Foreigners Return'''

|-
|'''Victory Condition:''' Defeat the Lesseps '''Defeat Condition:''' Ally battleship is defeated, Kira is defeated '''Skill Point:''' Defeat the Lesseps in 6 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Kira unlocks the SEED pilot skill
*Albion (Synapse, Paserov)
*Gundam Stamen (Kou)
*GM Cannon II (Keith)
*GM Custom (Burning)
*GM Custom (Bate)
*GM Custom (Monsha)
*GM Cannon II (Adel)
*Gundam GP01fb
*Armed Base Orchis parts for Gundam Stamen

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Destroy Helmut's Muge battleship in 4 turns (retreats at 6000HP (E) / 8000HP (N) / 10000 HP(H)) '''Secret Requirements:''' '''Unit Acquisition:'''
*Ideon (Cosmo, Kasha, Moera)
*Ideon gains the "Ideon Sword" and "Ideon Sword (MAP)" attacks
*Soloship (Bess, Hatari)

|-
| class="fc-route1" |'''第２１話：プリティ・デビル Scenario 21 - Pretty Devil'''
| class="fc-route3" |'''第２１話：裏切りの代償 Scenario 21 - The Cost of Betrayal'''

|-
|'''Victory Condition:'''
*1st Part: Gigil's ship is defeated
*2nd Part: Gigil's ship is defeated 
'''Defeat Condition:'''
*1st Part: Any ally is defeated
*2nd Part: Basara is defeated
'''Skill Point:''' Destroy Gigil before he moves adjacent to Sivil '''Secret Requirements:'''
*LaGOWE
**Waltfeld and Dacosta must both survive and get a combined total of 10 kills or more on the first half of the scenario.
*VF-1J
**Milia must get a total of 10 kills in the first half of the scenario.
'''Unit Acquisition:'''
*VF-17S Nightmare (Kinryu)
*VF-17D Nightmare (Gamlin)
*VF-17D Nightmare (Physica)
*VF-1J S Valkyrie (Milia)
*LaGOWE (Waldfelt)
*BuCUE (Dacosta)
*Skygrasper (Cagalli)
*VF-19 Kai Fire Valkyrie (Basara)
*VF-17S Nighmare (Milia)
*VF-1J S Valkyrie

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Any ally is defeated '''Skill Point:''' Destroy all enemies in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Goshogun (Shingo, Killy, Remi)
*Good Thunder (Sabranth)

|-
| class="fc-route1" |'''第２２話：砂塵の果て Scenario 22 - Beyond the Clouds of Sand'''
| class="fc-route3" |'''第２２話：発動する力、無限大 Scenario 22 - Infinite Activation Power'''

|-
|'''Victory Condition:''' (1) Defeat the Lesseps; (2) Waltfeld is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated '''Skill Point:''' Defeat the Lesseps in 5 turns '''Secret Requirements:'''
*LaGOWE
**Kira must destroy Waltfeld's LaGOWE while in SEED. (Kira has to activate SEED mode before the event that ends the stage.)
'''Unit Acquisition:'''
*Kira unlocks the SEED pilot skill

|'''Victory Condition:''' (1) Soloship reaches the computer facility; (2) Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Get the Soloship to the indicated area in 4 turns without it taking any damage '''Secret Requirements:''' '''Unit Acquisition:'''
*HyoRyu (HyoRyu)
*EnRyu (EnRyu)

|-
| class="fc-route1" |'''第２３話：エモーション・ハイ Scenario 23 - Emotion High'''
| class="fc-route3" |'''第２３話：決戦！地獄の月荒野 Scenario 23 - Decisive Battle in the Hellish Lunar Wilderness!'''

|-
|'''Victory Condition:''' (1) Defeat 2 Ghosts; (2) Defeat all enemies; (3) Basara sings to Sivil, All ZAFT forces are defeated '''Defeat Condition:''' (1) Ally battleship is defeated, Battle 7 is defeated; (2) Ally battleship is defeated, Battle 7 is defeated, Isamu or Guld are defeated; (3) Ally battleship is defeated, Isamu, Guld, or Basara are defeated '''Skill Point:''' Clear the map in 9 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*YF-19's "Full Volley" attacks gains +200 Attack power
*YF-19 and YF-21 gain the "Double Pinpoint Barrier Punch" combination attack
*Battle 7 (Max, Exedore, Miho, Sally)
*VF-19 Kai Fire Valkyrie (Basara)
*Mazinkaiser
*Shin Getter Robo

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Clear the map in 9 turns '''Secret Requirements:''' '''Unit Acquisition:'''

|-
| colspan="2" class="fc-std-sc" |'''第２４話：戦神の星で Scenario 24 - On the Planet of the War God'''

|-
| colspan="2" |'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' (1) Any ally is defeated; (2) Ally battleship is defeated '''Skill Point:''' Destroy all enemies in 3 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*VF-19 Kai Fire Valkyrie (Basara)
*VF-11 MAXL Kai (Mylene)
*VF-17 Kai Nightmare (Ray, Veffidas)
*Tallgeese III (Zechs)
*Taurus (Noin)
*Voltes V (Kenichi, Ippei, Daijiroh, Hiyoshi, Megumi)
*Daimos (Kazuya)
*Garuba FX-II (Kyoshiro, Nana)

|-
| colspan="2" class="fc-std-sc" |'''第２５話：選ばれし者、選びし者 Scenario 25 - Those Who Are Chosen, Those Who Choose'''

|-
| colspan="2" |'''Victory Condition:''' (1) Hermos is defeated; (2) Zifrud is defeated '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Clear the map in 8 turns '''Secret Requirements:''' '''Unit Acquisition:'''

|-
| colspan="2" class="fc-std-sc" |'''第２６話：かりそめの旅人 Scenario 26 - Transitory Traveler'''

|-
| colspan="2" |'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated, Temjin, Fei Yen, or Apharmd are defeated '''Skill Point:''' Destroy all enemies in 3 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Temjin 747J (Chief)
*Fei Yen the Knight (Fei)
*Apharmd The Hatter (The Hatter)

|-
| colspan="2" class="fc-std-sc" |'''第２７話：勇気ある者達の誓い Scenario 27 - The Oath of the Courageous'''

|-
| colspan="2" |'''Victory Condition:'''
*1st Part: Defeat all enemies
*2nd Part: (1) Defeat all enemies; (2) Defeat the Z-Master within (10 (E) / 7 (N) / 5 (H)) turns 
'''Defeat Condition:'''
*1st Part: Ally battleship is defeated, Gai is defeated
*2nd Part: (1) Ally battleship is defeated, Gai or J are defeated; (2) (10 (E) / 7 (N) / 5 (H)) turns have passed, Ally battleship is defeated, Gai or J are defeated 
'''Skill Point:''' Destroy all enemies in 7 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*J-Ark (J, Tomoro)

|-
| colspan="2" class="fc-std-sc" |'''第２８話：いつか星の海へ Scenario 28 - Someday, In the Sea of Stars'''

|-
| colspan="2" |'''Victory Condition:''' (1)(2) Defeat the Zonder Robo; (3) Defeat the Zonder Robo within 6 attacks from Star GaoGaiGar; (4)(5) Defeat all enemies '''Defeat Condition:''' (1) Galeon is defeated; (2) Ally battleship is defeated, Galeon is defeated; (3) Ally battleship or Gai are defeated, Zonder Robo is not defeated within 6 attacks from Star GaoGaiGar (4) Main Character is defeated; (5) Ally battleship is defeated '''Skill Point:''' Destroy the Zonuder Robo in 5 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Galeon (Galeon)
*Star GaoGaiGar/GaoGaiGar (Gai)
*YF-19 (Isamu)
*YF-21 (Guld)
*Battle 7 (Max)
*VF-17S Nightmare (Milia)
*VF-17D Nightmare (Gamlin)
*VF-17D Nightmare (Physica)
*VF-19 Kai Fire Valkyrie (Basara)
*VF-11 MAXL Kai (Mylene)
*VF-17 Kai Nightmare (Ray, Veffidas)
*HyoRyu (HyoRyu)
*EnRyu (EnRyu)
*Goldymarg (Goldymarg)
*Volfogg (Volfogg)
*Mic Sounders XIII (Mic Sounder XIII)
*Ideon (Cosmo, Kasha, Moera)
*Soloship (Bess, Hatari)
*Star GaoGaiGar (Guy, Choryujin, Goldymarg, Mic, Volfogg)
*Dygenguar (Sanger)
*Aussenseiter (Ratsel)
*R-Blade Custom (Ryusei)
*R-Gun Powered (Viletta)

|-
| colspan="2" class="fc-std-sc" |'''第２９話：押された烙印 Scenario 29 - Branded with the Mark'''

|-
| colspan="2" |'''Victory Condition:''' (1)(2) Defeat all enemies '''Defeat Condition:''' (1) Ally battleship is defeated; (2) Ally battleship is defeated, Cagalli is defeated '''Skill Point:''' Destroy all enemies in 6 turns '''Secret Requirements:'''
*Destroid Monster
**Take the Space Route
*FBz-99G
**Take the Space Route
*Strike Rouge IWSP
**Cagalli must have 30 or more kills by the end of this stage.
***Take the Alaska Route
*Duel Gundam
**Take the Alaska Route
'''Unit Acquisition:'''
*GaoFighGar (Guy)
*HyoRyu (HyoRyu)
*EnRyu (EnRyu)
*Goldymarg (Goldymarg)
*Volfogg (Volfogg)/Big Volfogg (Big Volfogg)
*Mic Sounders XIII (Mic Sounders XIII)
*AnRyu (AnRyu)
*KouRyu (KouRyu)
*Ra Cailum (Bright, Torres)

|- class="fc-route-h"
|'''Head to Alaska''' Gundam (0083, Z, ZZ, CCA, Wing, SEED) Daitarn 3 Mazinger (Z, Great) Steel Jeeg Voltes V Daimos Dancouga Evangelion
|'''Go to Space''' GaoGaiGar Ideon Getter Robo Combattler V GaiKing Raideen Goshogun Macross (DYRL, 7, Plus) Virtual On

|-
| class="fc-route2" |'''第３０話：終わらない閃光 Scenario 30 - Unending Flashes of Light'''
| class="fc-route4" |'''第３０話：ロスト・ディーヴァ Scenario 30 - Lost Diva'''

|-
|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated, Kira is defeated '''Skill Point:''' Clear the map in 7 turns '''Secret Requirements:'''
*Strike Rouge IWSP
**Mwu must defeat Dearka
**After the event, Kira must defeat Athrun while both are in SEED.
'''Unit Acquisition:'''
*Skygrasper (Cagalli)
*Strike Gundam (Kira)
*Kira unlocks the SEED pilot skill
*Cagalli unlocks the SEED pilot skill (needs verification)
*Archangel loses Natarle as a subpilot

|'''Victory Condition:''' (1)(2) Defeat all enemies '''Defeat Condition:''' (1) Any ally is defeated: (2) Ally battleship is defeated, Fire Bomber, Diamond Force, or Skull Squadron are defeated '''Skill Point:''' In 6 turns, destroy Glavil and Gavil. You must destroy Glavil before Gavil '''Secret Requirements:'''
*Gavil and FBz-99G Zaubergeran
**Gamlin must defeat Gavil
'''Unit Acquisition:'''
*YF-19 (Isamu) (Before Deploying)
*YF-21 (Guld) (Before Deploying)
*VF-1S S Valkyrie (Focker)
*VF-1S S Valkyrie (Hikaru)
*VF-1A S Valkyrie (Kakizaki)
*VF-17D Nightmare (Gamlin)
*VF-17D Nightmare (Physica)
*VF-19 Kai Fire Valkyrie (Basara)
*VF-11 MAXL Kai (Mylene)
*VF-17 Kai Nightmare (Ray, Veffidas)

|-
| class="fc-route2" |'''第３１話：青き清浄なる世界のために Scenario 31 - For Our Blue & Pure World'''
| class="fc-route4" |'''第３１話：禁断の惑星へ Scenario 31 - To the Forbidden Planet'''

|-
|'''Victory Condition:''' (1) Defeat all enemies; (2)(3) Defeat all Mobile Dolls, All ZAFT Units retreat '''Defeat Condition:''' (1)(2) Ally battleship is defeated, Heero is defeated; (3) Ally battleship is defeated '''Skill Point:''' Do not let a single ZAFT machine get shot down '''Secret Requirements:'''
*Duel Gundam
**Yzak must survive the scenario.
'''Unit Acquisition:'''
*Archangel gains Newman as a subpilot
*Freedom Gundam (Kira)
*Daitarn 3 (Banjo)
*Black Wing (Alan)

|'''Victory Condition:'''
*1st Part: Defeat all enemies
*2nd Part: Defeat Gepelnitch
'''Defeat Condition:'''
*1st Part: Any ally is defeated
*2nd Part: Ally battleship is defeated, Basara or Gamlin are defeated
'''Skill Point:''' In 7 turns, destroy Glavil and Gavil and make Gepelnitch's ship retreat (at 50,000 HP) '''Secret Requirements:'''
*Destroid Monster
**Get the Skill Point on this stage.
*Gavil and FBz-99G Zaubergeran
**Gamlin must defeat Gavil 
'''Unit Acquisition:'''
*Destroid Monster

|-
| class="fc-route2" |'''第３２話：守護神の巫女 Scenario 32 - Priestess of the Guardian God'''
| class="fc-route4" |'''第３２話：インフィニティ・ソウル Scenario 32 - Infinity Soul'''

|-
|'''Victory Condition:''' (1)(2) Defeat all enemies '''Defeat Condition:''' Any Ally is defeated; Ally battleship is defeated, Sanger or Rastel are defeated '''Skill Point:''' In 5 turns, destroy the General of Hell or Flora. '''Secret Requirements:''' '''Unit Acquisition:'''
*Dygenguar (Sanger)
*Assenseiter (Ratsel)

|'''Victory Condition:''' (1) Valgo is defeated; (2)(3) Defeat all enemies '''Defeat Condition:''' (1) Mylene, Ray, or Gamlin are defeated; (2) Basara, Mylene, Ray, or Gamlin are defeated; (3) Ideon is defeated '''Skill Point:''' In 6 turns, destroy Valgo '''Secret Requirements:'''
*Gavil and FBz-99G Zaubergeran
**Gamlin must defeat Gavil 
'''Unit Acquisition:'''
*VF-17D Nightmare → VF-17S Nightmare (Gamlin)
*VF-17D Nightmare (Docker)
**VF-17S (Gamlin), VF-17D (Physica) and VF-17D (Docker) gain the "Diamond Force Attack" combination attack
*VF-19 Kai Fire Valkyrie, VF-11 MAXL Kai, and VF-17 Kai Nightmare gain the "Sound Booster" mech ability
**All VF-19 Kai Fire Valkyrie SB Songs gain (MAP) and (ALL) combination attack variants when Sound Booster activates.
**All VF-11 MAXL Kai SB Songs gain (MAP) and (ALL) combination attack variants when Sound Booster activates.
*Ideon (Cosmo, Kasha, Moera)
** Ideon gains the "Ideon Sword" and "Ideon Sword (MAP)" attacks when IDE gauge is full, and HP is below 30%
*Soloship (Bess, Hatari)

|-
| class="fc-route2" |'''第３３話：暁への脱出 Scenario 33 - Escape to Daybreak'''
| class="fc-route4" |'''第３３話：受け継ぎし遺産 Scenario 33 - The Successor's Inheritance'''

|-
|'''Victory Condition:''' (1)(2) Defeat all enemies besides the Albion '''Defeat Condition:''' (1) Ally battleship is defeated, Kira, Shinobu, or Alan are defeated, Albion is defeated; (2) Kira, Shinobu, Alan, Mwu, or Cagalli are defeated '''Skill Point:''' In 8 turns, destroy all enemies except the Albion '''Secret Requirements:''' '''Unit Acquisition:'''
*Strike Gundam (Mwu)
*Strike Rouge (Cagailli)
*M1 Astray (Juri)
*M1 Astray (Mayura)
*M1 Astray (Asagi)
*Justice Gundam (Athrun)
*Buster Gundam (Dearka)
*Mazinger Z gains the "Giant Swing Rocket Punch" attack
*Great Mazinger gains the "Great Booster" attack
*Koutetsu Jeeg stats are enhanced and can transform into Jeeg Panzeroid
*Dancouga and Black Wing can combine into Final Dancouga.

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated, Akira or Jinguji are defeated '''Skill Point:''' In 8 turns, destroy Etzira, Valgo, Glavil, Gabro Zan, and Gije '''Secret Requirements:''' '''Unit Acquisition:'''
*VF-1A S Valkyrie (Kakizaki)
*Raideen gains the Mutron Open mech ability
*Ideon (Cosmo, Kasha, Moera)
*Soloship (Bess, Hatari)
*Battle 7 (Max, Exedore, Miho, Sally)
*VF-1S S Valkyrie (Fokker)
*VF-1S S Valkyrie (Hikaru)
*VF-1A S Valkyrie (Kakizaki)
*YF-19 (Isamu)
*YF-21 (Guld)
*VF-19 Kai Fire Valkyrie (Basara)
*VF-11 MAXL Kai (Mylene)
*VF-17 Kai Nightmare (Ray, Veffidas)
*VF-17S Nightmare (Gamlin)
*VF-17D Nightmare (Physica)
*VF-17D Nightmare (Docker)

|}
 

==Stages 34 - 44==
{| width="100%"
|- class="fc-route-h"
| width="25%" |'''Touma Route'''
| width="25%" |'''Kusuha Route'''
| width="25%" |'''Cobray Route'''
| width="25%" |'''Selena Route'''

|-
| class="fc-route1" |'''第３４話：武人の心、その意味 Scenario 34 - Why a Warrior Fights'''
| class="fc-route2" |'''第３４話：怒りの強念者 Scenario 34 - The Wrath of a Esper'''
| class="fc-route3" |'''第３４話：虚ろな魂の捕囚 Scenario 34 - Captivity of the Hollow Soul'''
| class="fc-route4" |'''第３４話：ベトレイヤー Scenario 34 - Betrayer'''

|-
|'''Victory Condition:'''
*1st Part: (1)(2) Defeat all enemies
*2nd Part: Bemidoban is defeated 
'''Defeat Condition:'''
*1st Part: (1) Ally battleship is defeated; (2) Ally battleship is defeated, Touma is defeated
*2nd Part: Touma is defeated
'''Skill Point:''' Defeat all enemies within 6 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Raioh (Touma)
*Mazinger Z, Great Mazinger and Getter Dragon gain the "F Dynamic Special" combination attack

|'''Victory Condition:'''(1)(2) Shin RyuOhKi is defeated; (3)(4) Bemidoban and Shmuel are defeated '''Defeat Condition:''' (1) Any ally is defeated; (2) Kusuha is defeated; (3) Kusuha is defeated, Ally battleship is defeated; (4) Ally battleship is defeated '''Skill Point:''' Destroy the Bemidoban (retreats (8000 (E) / 10000 (N) / 12000 (H)) HP) '''Secret Requirements:''' '''Unit Acquisition:'''
*Mazinger Z, Great Mazinger and Getter Dragon gain the "F Dynamic Special" combination attack
*Dygenguar (Sanger)
*Aussenseiter (Ratsel)

|'''Victory Condition:''' Shin RyuOhKi is defeated '''Defeat Condition:''' Ally battleship is defeated, Cobray, Arad, or Seolla are defeated '''Skill Point:''' Defeat Shin RyuOuKi within 6 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Werkbau (Cobray)
*Mazinger Z, Great Mazinger and Getter Dragon gain the "F Dynamic Special" combination attack

|'''Victory Condition:''' (1) Shmuel is defeated; (2)(3) Bemidoban defeated Shin RyuOhKi '''Defeat Condition:''' (1) Selena is defeated; (2) Ally battleship is defeated, Selena is defeated; (3) Ally battleship is defeated '''Skill Point:''' Bemidoban and Shin RyuOuKi shot down. Both flee when below (8000 (E) / 10000 (N) / 12000 (H)) HP. '''Secret Requirements:''' '''Unit Acquisition:'''
*Mazinger Z, Great Mazinger and Getter Dragon gain the "F Dynamic Special" combination attack
*Alterion (CF) (Ibis, Tsugumi)
*AS Soleares (Selena, Elma) is unavailable during the intermission

|-
| class="fc-route1" |'''第３５話：闘志、誰がために Scenario 35 - For Whom the Fighting Spirit Burns'''
| class="fc-route2" |'''第３５話：魂、久遠に Scenario 35 - The Soul, Into Eternity'''
| class="fc-route3" |'''第３５話：THE GUN OF DIS Scenario 35 - THE GUN OF DIS'''
| class="fc-route4" |'''第３５話：クロージング・ハート Scenario 35 - Closing Heart'''

|-
|'''Victory Condition:''' (1)(2) Defeat all enemies '''Defeat Condition:''' (1) Touma is defeated; (2) Ally battleship is defeated, Touma, Sanger, or Rastel are defeated '''Skill Point:''' Defeat all enemies within 4 turns of allied reinforcements arriving. '''Secret Requirements:''' '''Unit Acquisition:'''
*DaiRaioh(Touma)
*Dygenguar (Sanger)
*Aussenseiter (Ratsel)

|'''Victory Condition:''' (1)(2)(3) Shin RyuOhKi is defeated '''Defeat Condition:''' (1) Kusuha or Bullet are defeated; (2) Kusuha is defeated; (3) Ally battleship is defeated, Kusuha is defeated '''Skill Point:''' Destroy Shin RyuOhKi within 6 turns of Varuch Ben and Ishar's arrival, destroying them first. '''Secret Requirements:''' '''Unit Acquisition:'''
*GouRyu Kai (Kusuha)
*Raiko Kai (Bullet)
*Shin RyuKoOh (Kusuha, Bullet)
*Dygenguar (Sanger)
*Aussenseiter (Ratsel)

|'''Victory Condition:''' (1)(2) Bemidoban or Shmuel are defeated; (3) ??? is defeated; (4) Valk Baal is defeated '''Defeat Condition:''' (1) Cobray is defeated, (2)(3)(4) Ally battleship is defeated, Cobray is defeated '''Skill Point:''' Defeat the Bemidoban within 5 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Varuch Ben (Cobray)
*Dis Astranagant (Cobray)

|'''Victory Condition:''' (1)(2) Defeat all enemies '''Defeat Condition:''' (1) Selena is defeated; (2) Ally battleship is defeated '''Skill Point:''' Map cleared within 7 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Eslim (Selena)
*Alterion (CF) replaces Tsugumi with Slay as a Subpilot

|-
| colspan="4" class="fc-std-sc" |'''第３６話：激突！勇者VS勇者！ Scenario 36 - Clash! Brave vs. Brave!'''

|-
| colspan="4" |'''Victory Condition:'''
*1st Part: Defeat all enemies
*2nd Part: Ally battleship is defeated
'''Defeat Condition:'''
*1st Part: Star GaoGaiGar is defeated
*2nd Part: Gai is defeated
'''Skill Point:''' Defeat all enemies within 6 turns. '''Secret Requirements:'''
*EVA-01 F-Type Equipment
**Shinji must defeat Ramiel on the first part of this scenario.
*Early Nu Gundam HWS
**Amuro must have 60 or more kills by the end of the scenario.
*GP-02A
**Burning, Monsha, Bate, and Adel must have a combined killcount of 100 or more by the end of the scenario.
*Nuclear Bazooka
**Meet the requirements for GP-02A
*Black Getter
**Michiru must have 20 kills or more by the end of the scenario.
'''Unit Acquisition:'''
*Gundam GP02
*Megarider
*Re-GZ BWS
*MP Nu Gundam
*Black Getter
*VF-1S S Valkyrie (Fokker)
*VF-1S S Valkyrie (Hikaru)
*VF-1A S Valkyrie (Kakizaki)
*VF-1J S Valkyrie
*YF-19 (Isamu)
*YF-21 (Guld)
*Battle 7 (Max)
*VF-19 Kai Fire Valkyrie (Basara)
*VF-11 MAXL Kai (Mylene)
*VF-17 Kai Nightmare (Ray)
*VF-17S Nightmare (Gamlin)
*VF-17D Nightmare (Physica)
*VF-17D Nightmare (Docker
*Soloship (Bess, Hatari)
*Ideon (Cosmo, Kasha, Moera)

|-
| colspan="4" class="fc-std-sc" |'''第３７話：果て無き旅路の始まり Scenario 37 - The Beginning of an Unending Journey'''

|-
| colspan="4" |'''Victory Condition:''' (1) Defeat all enemies; (2)(3) Devariim is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated; (3) Ally battleship is defeated, Bundle, Cutnall, or Kernagul are defeated
'''Skill Point:''' All enemies destroyed within 6 turns, with Devariim being last. '''Secret Requirements:''' '''Unit Acquisition:'''
*Heavy Weapons System parts for Nu Gundam
*Evangelion Unit 0 Custom gains the "N2 Mine" MAP attack
*Evangelion Unit 1 gains the "Magoroku E Sword" attack
*Gunbuster (Noriko)
*Sizzler Black (Jung)
*Eltrium (Tashiro, Deputy Chief)
*Bundle Ship (Bundle)
*Cutnall Ship (Cutnall)
*Kernagul Ship (Kernagul)

|- class="fc-route-h"
| colspan="2" |'''Go with the Soloship''' Gundam (0083, Zeta, ZZ, CCA, Wing, SEED) Getter Robo Raideen Daitarn 3 Evangelion Ideon GaoGaiGar
| colspan="2" |'''Go with the Battle 7''' Mazinger (Z, Great) Macross (DYRL, 7, Plus) Steel Jeeg Combattler V Voltes V Gunbuster Daimos Gaiking Goshogun Dancouga Virtual On

|-
| colspan="2" class="fc-route1" |'''第３８話：運命の炎の中で Scenario 38 - Within the Fires of Destiny'''
| colspan="2" class="fc-route3" |'''第３８話：戦火は星の瞬きと Scenario 38 - The Fires of War Among the Twinkling Stars'''

|-
| colspan="2" |'''Victory Condition:'''
*1st Part: Enemy Battleship is defeated
*2nd Part: (1) Defeat all enemies; (2) Dalam's Ship is defeated
'''Defeat Condition:'''
*1st Part: Ally battleship is defeated, Ideon is defeated
*2nd Part: (1) Ally battleship is defeated; (2) Ally battleship is defeated, Cosmo is defeated
'''Skill Point:''' Clear the map within 7 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Ideon loses Moera as a subpilot
*Ideon gains the "Ideon Gun" attack

| colspan="2" |'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Defeat all enemies within 6 turns. '''Secret Requirements:''' '''Unit Acquisition:'''

|-
| colspan="2" class="fc-route1" |'''第３９話：果てに待つもの Scenario 39 - What Awaits at the End'''
| colspan="2" class="fc-route3" |'''第３９話：ただ母星のために Scenario 39 - All for the Motherworld'''

|-
| colspan="2" |'''Victory Condition:''' (1)(2)Gabro Zan is defeated '''Defeat Condition:''' (1) Ally battleship is defeated, Ryouma, Hayato, Benkei, or Michiru are defeated; (2) Ally battleship is defeated, Ryouma, Hayato, Benkei, or Cosmo are defeated '''Skill Point:''' Destroy all Buff Clan ships within 8 turns, saving Gabro Zan for last. '''Secret Requirements:''' '''Unit Acquisition:'''
* Ideon gains Gije as a subpilot
* Shin Getter-1 gains the "Shin Shine Spark" attack

| colspan="2" |'''Victory Condition:''' Heinel is defeated '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Within 7 turns, defeat all enemies, then defeat Heinel and Richter (Richter must be defeated before Heinel) '''Secret Requirements:''' '''Unit Acquisition:'''

*Goshogun gains the "GoFlasher Special" attack

|-
| colspan="2" class="fc-route1" |'''第４０話：勇者王、最後の刻！ Scenario 40 - The King of Brave’s Final Hour!'''
| colspan="2" class="fc-route3" |'''第４０話：勇気、果つる時… Scenario 40 - When Courage Fails...'''

|-
| colspan="2" |'''Victory Condition:'''
*1st Part: Defeat all enemies
*2nd Part: Ally battleship is defeated
'''Defeat Condition:'''
*1st Part: Defeat all enemies
*2nd Part: Gai is defeated
'''Skill Point:''' Defeat all enemies within 6 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*All GaoGaiGar units are lost

| colspan="2" |'''Victory Condition:''' (1)(2)(3) Defeat all enemies '''Defeat Condition:''' (1) Gai is defeated; (2) Ally battleship is defeated, Gai is defeated; (3) Ally battleship is defeated '''Skill Point:''' Defeat all enemies within 7 turns, with Palparepa Plus being the last one. '''Secret Requirements:''' '''Unit Acquisition:'''
*GaoFighGar (Gai)
*All GaoGaiGar units are lost

|-
| colspan="4" class="fc-std-sc" |'''第４１話：銀河が消滅する日 Scenario 41 - The Day the Galaxy is Extinguished'''

|-
| colspan="4" |'''Victory Condition:''' (1) Defeat all enemies; (2) GaoFighGar is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated, J is defeated '''Skill Point:''' GaoFighGar shot down by turn 7. '''Secret Requirements:'''
*Gije & Ganga Rube
**When given the option, choose to meet the opponent's challenge (first option).
'''Unit Acquisition:'''
*J-Ark (J)
|-
| colspan="4" class="fc-std-sc" |'''第４２話：超勇者黙示録 Scenario 42 - The Super Brave Apocalypse'''

|-
| colspan="4" |'''Victory Condition:'''
*1st Part: Defeat all enemies
*2nd Part: Genesis GaoGaiGar reaches the designated point in 4 turns
'''Defeat Condition:'''
*1st Part: Gai or J are defeated
*2nd Part: Ally battleship is defeated, Gai is defeated, 5th turn is reached
'''Skill Point:''' All enemies shot down by turn 7. '''Secret Requirements:'''
* J-Phoenix & Renais (Sub Pilot)
**Have J defeat Pia Decem on the first part of the stage. Defeat Pia Decem again to gain the attack.
'''Unit Acquisition:'''
* King J-der gains the "J-Phoenix" attack, and gains Renais as a sub-pilot
**Koryuu and Anryuu lose the "Renais Support Attack" attacks
*Genesic GaoGaiGar (Gai)
*J-Ark (J, Tomoro)
** Renais also is a sub-pilot if the conditions are met in the first part of the stage
*Goldymarg (Goldymarg)
*Big Volfogg (Volfogg)
*TenRyuJin (TenRyuJin)
*KoRyu (KoRyu)
*AnRyu (AnRyu)
*EnRyu (EnRyu)
*HyoRyu (HyoRyu)
*Mic Sounder XIII (Mic Sounder XIII)

|- class="fc-route-h"
|'''Touma Route'''
|'''Kusuha Route'''
|'''Cobray Route'''
|'''Selena Route'''

|-
| class="fc-route1" |'''第４３話：閉ざされた世界で Scenario 43 - In a Closed-Off World'''
| class="fc-route2" |'''第４３話：真の龍神 Scenario 43 - The True Dragon God'''
| class="fc-route3" |'''第４３話：人形たちの宴 Scenario 43 - The Doll’s Banquet'''
| class="fc-route4" |'''第４３話：サイレント・クライ Scenario 43 - Silent Cry'''

|-
|'''Victory Condition:'''
*1st Part: (1) Defeat all enemies; (2) Vaikran is defeated, Houle is defeated
*2nd Part: Baran is defeated
'''Defeat Condition:'''
*1st Part: (1) Ally battleship is defeated, Touma or Ryusei are defeated; (2) Ally battleship is defeated, Ryusei is defeated
*2nd Part: Touma is defeated
'''Skill Point:''' Defeat the Bemidoban within 5 turns. '''Secret Requirements:''' '''Unit Acquisition:'''

|'''Victory Condition:''' (1) Defeat Shin RyuOhKi; (2) Vaikran is defeated, Houle is defeated '''Defeat Condition:''' (1) Kusuha or Ryusei are defeated; (2) Ally battleship is defeated, Ryusei is defeated '''Skill Point:''' Defeat Shin RyuOhKi within 5 turns. '''Secret Requirements:''' '''Unit Acquisition:'''

|'''Victory Condition:'''
*1st Part: (1) Defeat all enemies; (2) Vaikran is defeated, Houle is defeated
*2nd Part: Valk Baal is defeated
'''Defeat Condition:'''
*1st Part: (1)(2) Ally battleship is defeated, Ryusei is defeated
*2nd Part: Cobray is defeated
'''Skill Point:''' Defeat the Bemidoban within 5 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Dis Astranagant (Cobray) is unavailable during the intermission

|'''Victory Condition:''' (1) Defeat all enemies; (2)(3) Vaikran is defeated, Houle is defeated'''Defeat Condition:''' (1)(2) Ally battleship is defeated, Selena, Ibis, or Ryusei are defeated (3) Ryusei is defeated'''Skill Point:''' Defeat the Bemidoban within 5 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*AS Alegrias (Selena, Elma?) Is unavailable until the next stage

|-
| class="fc-route1" |'''第４４話：闘志、未来のために Scenario 44 - Fighting Spirit, for the Future'''
| class="fc-route2" |'''第４４話：四神招魂、ここに Scenario 44 - The Four Gods Souls, Gather Here'''
| class="fc-route3" |'''第４４話：鋼の戦神 Scenario 44 - The Steel War God'''
| class="fc-route4" |'''第４４話：マイホーム・マイフレンズ Scenario 44 - My Home, My Friends'''

|-
|'''Victory Condition:'''
*1st Part: Vaikran is defeated
*2nd Part: (1)(2) Vaikran is defeated
'''Defeat Condition:'''
*1st Part: Ally battleship is defeated, Ryusei is defeated
*2nd Part: (1) Touma or Lyria are defeated; (2) Touma, Baran, or Lyria are defeated
'''Skill Point:''' Destroy the Vaikran within 5 turns. '''Secret Requirements:'''
*VF-19F Excaliburs
**Max must have a total of 60 or more kills by the end of the scenario, if you do not pick the Go to Varauta route.
*Gije & Ganga Rube
**You must pick the Go To Bozoan Route.
'''Unit Acquisition:'''
*Banpreios (Ryuusei, Rai, Mai)
*Dygenguar (Sanger)
*Aussenseiter (Ratsel)
*Shumel (Lyria)
*Bemidoban (Baran)

|'''Victory Condition:'''
*1st Part: Vaikran is defeated
*2nd Part: (1)(2) Vaikran is defeated
'''Defeat Condition:'''
*1st Part: Kusuha or Ryusei are defeated
*2nd Part: (1) Ally battleship is defeated, Kusuha is defeated; (2) Kusuha, Bullet, or Lyria are defeated
'''Skill Point:''' Destroy the Vaikran within 5 turns. '''Secret Requirements:'''
*VF-19F Excaliburs
**Max must have a total of 60 or more kills by the end of the scenario, if you do not pick the Go to Varauta route.
*Gije & Ganga Rube
**You must pick the Go To Bozoan Route.
'''Unit Acquisition:'''
*Banpreios (Ryuusei, Rai, Mai)
*Dygenguar (Sanger)
*Aussenseiter (Ratsel)
*Shumel (Lyria)
*Shin RyuKoOh can now transform into Shin KoRyuOh

|'''Victory Condition:'''
*1st Part: (1) Defeat all enemies; (2) Vaikran is defeated
*2nd Part: Defeat all enemies
'''Defeat Condition:'''
*1st Part: (1)(2) Ally battleship is defeated, Ryusei, Arad or Seola are defeated
*2nd Part: Ally battleship is defeated, Cobray or Lyria are defeated
'''Skill Point:''' Destroy the Vaikran within 3 turns of its arrival. '''Secret Requirements:'''
*VF-19F Excaliburs
**Max must have a total of 60 or more kills by the end of the scenario, if you do not pick the Go to Varauta route.
*Gije & Ganga Rube
**You must pick the Go To Bozoan Route.
'''Unit Acquisition:'''
*Dis Astranagant (Cobray)
*Banpreios (Ryuusei, Rai, Mai)
*Dygenguar (Sanger)
*Aussenseiter (Ratsel)
*Shumel (Lyria)

|'''Victory Condition:'''
*1st Part: (1) Valk Isher is defeated; (2) Vaikran is defeated
*2nd Part: (1)(2) Vaikran is defeated
'''Defeat Condition:'''
*1st Part: (1)(2) Ally battleship is defeated, Ryusei or Ibis are defeated
*2nd Part: (1) Ally battleship is defeated, Selena, Ibis, or Lyria are defeated; (2) Selena or Lyria are defeated
'''Skill Point:''' Destroy the Vaikran within 3 turns of its arrival. '''Secret Requirements:'''
*VF-19F Excaliburs
**Max must have a total of 60 or more kills by the end of the scenario, if you do not pick the Go to Varauta route.
*Gije & Ganga Rube
**You must pick the Go To Bozoan Route.
'''Unit Acquisition:'''
*Banpreios (Ryuusei, Rai, Mai)
*Dygenguar (Sanger)
*Aussenseiter (Ratsel)
*Shumel (Lyria)
*Alterion (CF) replaces Slay with Tsugumi as a subpilot
*Vegalion (Slay)
**Alterion (CF) and Vegalion can combine into Hyperion

|}
 

==Stages 45 - 48==
{| width="100%"
|- class="fc-route-h"
| colspan="2" |'''Go to Earth'''
| colspan="2" |'''Go to Space'''

|- class="fc-route-h"
| width="25%" |'''Search for Irui''' Mazinger (Z, Great) Getter Robo Kotetsu Jeeg Gaiking Dancouga
| width="25%" |'''Fight against ZAFT''' Gundam (0083, Z, ZZ, CCA) Gundam Wing Gundam SEED Evangelion
| width="25%" |'''Go to Varauta''' Macross (DYRL, 7, Plus) GoShogun Daitarn 3 Gunbuster
| width="25%" |'''Go to Boazan''' Ideon Combattler V Voltes V Daimos Raideen GaoGaiGar Virtual On

|-
| class="fc-route1" |'''第４５話：とらわれの心、叫ぶ時 Scenario 45 - When the Captive Heart Cries Out'''
| class="fc-route2" |'''第４５話：忍び寄る終焉 Scenario 45 - Creeping Death'''
| class="fc-route3" |'''第４５話：悪夢の突入作戦 Scenario 45 - Charging into a Nightmare'''
| class="fc-route4" |'''第４５話：もう一つの母星ボアザン Scenario 45 - Another Mother Planet - Boazan'''

|-
|'''Victory Condition:''' (1) Defeat all enemies: (2) Legion is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated '''Skill Point:''' Defeat all enemies within 7 turns '''Secret Requirements:'''
'''Unit Acquisition:'''

|'''Victory Condition:''' (1) Defeat all enemies; (2) All Angels are defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated, Shinji, Asuka, or Rei are defeated '''Skill Point:''' Defeat all enemies within 5 turns. '''Secret Requirements:'''
*Early Nu Gundam HWS
**If you did not receive it on Scenario 37, Amuro must have 60 or more kills by the end of the scenario.
*EVA-01 F-Type Equipment(optional)
**Shinji must defeat Armisael.
*Neue Ziel
**Kou must have 40 or more kills than Keith by the end of the scenario.
*Val Varo
**Keith must have 20 or more kills than Kou by the end of the scenario.
*Gerbera Tetra
**Kou and Keith's killcounts must be within 6 of one another by the end of the scenario.
*Quin Mantha
**The sum of Ple and Ple 2's killcounts must be a number ending in 5 at the end of the scenario.
*Haman's Qubeley
**The sum of Ple and Ple 2's killcounts must be a number ending in 0 at the end of the scenario.
*MP Qubeleys
**The sum of Ple and Ple 2's killcounts must be a number ending in 7 at the end of the scenario.
*Doven Wolf
**The sum of Beecha and Mondo's killcounts must be a number ending in 0 at the end of the scenario.
*Geymalk
**The sum of Beecha and Mondo's killcounts must be a number ending in 5 at the end of the scenario.
*Strike Rouge IWSP
**The sum of Cagalli, Julie, Mayura, and Asagi's killcounts must be 100 or more by the end of the scenario.
*Early Full Armor ZZ Gundam
**Judau, Mondo, Beecha, Elle, Roux, and Iino's combined killcounts must be greater than 115 by the end of this scenario.
'''Unit Acquisition:'''
*Neue Ziel OR Val Varo OR Gerbera Tetra
*Quin Mantha OR Haman's Qubeley OR Mass Production Qubeley (x2)
*Doven Wolf OR Geymalk
*Strike Rougue IWSP
*Heavy Weapon System for Nu Gundam
*Full Armor Parts for ZZ Gundam
*Evangelion Unit 2 gains the "A.T. Field" attack
*Evangelion Unit 0 Custom gains the "Lance of Longinus" attack

|'''Victory Condition:'''
*1st Part: All allies reach the designated point, aside Battle 7
*2nd Part: Any ally reaches the designated point
'''Defeat Condition:'''
*1st Part: Any ally is defeated
*2nd Part: Any ally is defeated
'''Skill Point:''' Defeat all enemies before moving a unit to the target area. '''Secret Requirements:'''
'''Unit Acquisition:'''
*The following all gain the "Large Anti-Ship Reaction Missile" attack
**VF-1S S Valkyrie (Focker), VF-1S S Valkyrie (Hikaru), VF-1A S Valkyrie (Kakizaki)
**VF-17S Nightmare (Gamlin), VF-17D Nightmare (Docker), VF-17D Nightmare (Physica)
**YF-19 (Isamu), YF-21 (Guld)

|'''Victory Condition:''' Zartan is defeated '''Defeat Condition:''' Any ally is defeated '''Skill Point:''' Destroy all other enemies before destroying Zaltan. '''Secret Requirements:'''
'''Unit Acquisition:'''
*Voltes V is unavailable during the intermission
*Daimos is unavailable during the intermission

|-
| class="fc-route1" |'''第４６話：さらば父よ、戦士達の旅立ち Scenario 46 - Farewell, Father! The Warriors Depart'''
| class="fc-route2" |'''第４６話：永遠を信じて Scenario 46 - Believe in Eternity'''
| class="fc-route3" |'''第４６話：野望の第４惑星 Scenario 46 - The Fourth Planet of Ambition'''
| class="fc-route4" |'''第４６話：崩れゆく邪悪の塔 Scenario 46 - The Collapsing Tower of Evil'''

|-
|'''Victory Condition:''' (1) Steel Jeeg persuades Flora; (2) Defeat Yamata no Orochi, Demonica, and the Dragon Ship; (3) '''Defeat Condition:''' (1) Flora is defeated, Ally battleship is defeated, Kouji, Tetsuya, or Steel Jeeg are defeated; (2) Yamata no Orochi reaches the designated point, Ally battleship is defeated, Kouji, Tetsuya or Steel Jeeg are defeated '''Skill Point:''' Destroy Ryuuma and the Grand Marshall of Hell within 8 turns. '''Secret Requirements:'''
*Minmei's Disc
**Move Boss's squad onto either 'Hut' tile on the beach, and you will pick up the item
'''Unit Acquisition:'''
*Mazinkaizer gains the "Kaizer Nova" attack and Flight (S Rank in Air)

|'''Victory Condition:''' (1)(2) Defeat all enemies; (3) The Dominion withdraws '''Defeat Condition:''' (1) Any ally is defeated; (2)(3) Ally battleship is defeated, Kira or Athrun are defeated '''Skill Point:''' Destroy the Dominion (retreats at (10000HP (E) / 15000HP (N)/20000HP (H)) '''Secret Requirements:''' '''Unit Acquisition:'''
*Eternal (Lacus, Andrew)
*BuCUE
*METEOR parts for Freedom Gundam
*METEOR parts for Justice Gundam
*LaGOWE

|'''Victory Condition:''' (1) Guide all enemies east past the designated line; (2) All allies reach the escape point '''Defeat Condition:''' (1) Any ally is defeated, Any enemy is defeated; (2) Any ally is defeated '''Skill Point:''' Clear the map by defeating all enemies within 8 turns of the victory condition change '''Secret Requirements:'''
*VF-19F Excaliburs
**Max must get 15 or more kills on this scenario.
'''Unit Acquisition:'''
*VF-22S Sturmvogel II (Max)
*FBz-99G Zaubergeran (Gamlin)
*VF-19 Kai Fire Valkyrie gains the song "TRY AGAIN"
**VF-19 Kai Fire Valkyrie, VF-11 MAXL Kai, and VF-17 Kai Nightmare gain the "TRY AGAIN" (MAP) and (ALL) combination attack

|'''Victory Condition:''' (1) None; (2) Warchimedes is defeated; (3) Janera is defeated '''Defeat Condition:''' (1) Any friendly unit is defeated, Voltes V or Daimos are defeated; (2)(3) Ally battleship is defeated, Hyouma, Ken'ichi, Kazuya, or Heinel are defeated '''Skill Point:''' Destroy all enemies and finish the stage within 10 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Combattler V, Voltes V, and Daimos gain the "Choudenji SeiKenZuki" combination attack

|-
| class="fc-route1" |'''第４７話：神になろうとした男 Scenario 47 - The Man Who Tried to Become a God'''
| class="fc-route2" |'''第４７話：ヒトの見た夢 Scenario 47 - The Dream People Saw'''
| class="fc-route3" |'''第４７話：大宇宙の意志 Scenario 47 - The Will of the Universe'''
| class="fc-route4" |'''第４７話：因果の海で Scenario 47 - In the Sea of Causality'''

|-
|'''Victory Condition:''' (1) Defeat all enemies; (2) Shapiro is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated '''Skill Point:''' Destroy Shapiro within 6 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Gaiking and Daiku Maryuu gain the "Giant Cutter Upside-down Slash" combination attack

|'''Victory Condition:''' (1)(2)(3) Defeat all enemies; '''Defeat Condition:''' (1) Ally battleship is defeated, Kira, Mwu, or Dearka are defeated; (2) Kira is defeated; (3) The Vesalius is defeated '''Skill Point:''' Orga, Clotho and Shani shot down before Fllay reaches the Dominion. '''Secret Requirements:''' '''Unit Acquisition:'''

|'''Victory Condition:''' (1)(2)(3) Defeat all enemies '''Defeat Condition:''' (1) Any ally is defeated; (2) Ally battleship is defeated, Bundle is defeated; (3) Ally battleship is defeated, Bundle, Gamlin, or Mylene are defeated '''Skill Point:''' Destroy all SMTC units within 5 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*VF-19S Excalibur (before deployment)
*VF-19F Excalibur (x2) (before deployment)
*Bundle's Ship (Bundle, Cutnal, Kernagul)

|'''Victory Condition:'''
*1st and 2nd Part: Defeat all enemies within (5 (E) / 4 (N) / 3 (H)) turns
*3rd and 4th Part: Defeat all enemies within (4 (E) / 3 (N) / 2 (H)) turns
*5th Part: Defeat all enemies within (8 (E) / 7 (N) / 6 (H)) turns
'''Defeat Condition:'''
*1st and 2nd Part: Ally battleship is defeated, Turn (6 (E) / 5 (N) / 4 (H)) is reached
*3rd and 4th Part: Ally battleship is defeated, Turn (5 (E) / 4 (N) / 3 (H)) is reached
*5th Part: Ally battleship is defeated, Turn (9 (E) / 8 (N) / 7 (H)) is reached
'''Skill Point:''' During the 5th Part: Shoot down the two Gataman Zans before the Gabro Zan '''Secret Requirements:''' '''Unit Acquisition:'''

|-
| colspan="2" class="fc-route1" |'''第４８話：失われた者たちへの鎮魂歌 Scenario 48 - Requiem for the Lost'''
| colspan="2" class="fc-route4" |'''第４８話：銀河に死す Scenario 48 - To Die in the Galaxy'''

|-
| colspan="2" |'''Victory Condition:''' (1) Deathgaia, Gildrome, and Helmut are defeated; (2) Mute Zalbados is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated '''Skill Point:''' Defeat all enemies within 6 turns after Muge Zalbados appears, then defeat Muge Zalbados '''Secret Requirements:'''
*Early Nu Gundam HWS
**If you did not receive it on Scenario 37 or 45, Amuro must have 60 or more kills by the end of the scenario.
'''Unit Acquisition:'''

| colspan="2" |'''Victory Condition:''' (1) Defeat all enemies; (2) Gollum or Zomd are defeated; (3) Defeat all enemies; (4) Gabro Zan is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated, Basara is defeated; (3)(4) Ally battleship is defeated, Ideon is defeated '''Skill Point:''' Destroy GaviGla (retreats at 8000HP (E) / 10000HP (N) / 12000HP (H)) '''Secret Requirements:'''
*Early Nu Gundam HWS
**If you did not receive it on Scenario 37 or 45, Amuro must have 60 or more kills by the end of the scenario.
*Gije & Ganga Rube
**The Ide Gauge must reach level 5 during this scenario.
'''Unit Acquisition:'''
*Ideon replaces Gije with Dek as a Subpilot
*Battle 7 gains the "Large Anti-Ship Reaction Missile" attack
*VF-19 Kai Fire Valkyrie (Basara) is unavailable during the intermission

|}
 

==Stages 49 - 58==
{| width="100%"
|-
| colspan="3" class="fc-std-sc" |'''第４９話：銀河に響く歌声 Scenario 49 - Songs Resounding Through the Galaxy'''

|-
| colspan="3" |'''Victory Condition:'''
*1st Part: Defeat all enemies, In 5 turns Battle 7 reaches the designated point
*2nd Part: (1) In 6 turns, Battle 7 reaches the designated point; (2)(3)(4) Gepelnitch is defeated
'''Defeat Condition:'''
*1st Part: Ally battleship is defeated, Battle 7 doesn't reach the designated point by turn 6
*2nd Part: (1) Ally battleship is defeated, Mylene or Ray are defeated, Battle 7 doesn't reach the designated point by turn 7; (2) Ally battleship is defeated, Ray is defeated; (3) Ally battleship is defeated, Basara, Mylene, or Ray are defeated; (4) Ally battleship is defeated, Basara, Mylene, Ray, or Sybil are defeated
'''Skill Point:''' GaviGla is defeated (in the 1st part) '''Secret Requirements:'''
*Gavil and FBz-99G Zaubergeran
**If Gamlin has over 50 kills, Gamlin must defeat GaviGla during the first half of the scenario. During the second half of the scenario, do not defeat Gavil.
'''Unit Acquisition:'''
*VF-22S Sturmvogel II (Max)
*VF-22S Sturmvogel II (Milia)
*Sybil (Sybil)
**VF-19 Kai Fire Valkyrie, VF-11 MAXL Kai, and VF-17 Kai Nightmare, and Sybil gain the "TRY AGAIN" combination attack
*FBz-99G Zaubergeran (Gavil)

|-
| colspan="3" class="fc-std-sc" |'''第５０話：二つの門と二つの星 Scenario 50 - Two Gates, Two Stars'''

|-
| colspan="3" |'''Victory Condition:''' (1) Hermodr Echad is defeated; (2) Zfield is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated '''Skill Point:''' Destroy the Hermodr Echad within 5 turns. '''Secret Requirements:'''
*Duel Gundam & Yzak
**Dearka's killcount must be 50 or more by the end of the scenario.
'''Unit Acquisition:'''

|-
| colspan="3" class="fc-std-sc" |'''第５１話：終わらない明日へ Scenario 51 - To an Unending Tomorrow'''

|-
| colspan="3" |'''Victory Condition:'''
*1st Part: (1) Destroy all nuclear missiles; (2) Dominion is defeated & Athrun reaches the designated point
*2nd Part: Destroy the Genesis reactor within 4 turns
'''Defeat Condition:'''
*1st Part: (1) Any missile reaches the end of the map, Ally battleship is defeated, Kira, Athrun or Cagalli are defeated; (2) Ally battleship is defeated, Kira, Athrun or Cagalli are defeated
*2nd Part: Kira is defeated, reach the 5th turn
'''Skill Point:''' Destroy the Providence Gundam (in the 2nd part) '''Secret Requirements:'''
*Duel Gundam & Yzak
**During the first half of the scenario, destroy all of the nukes, then have Dearka battle with Yzak
**Both must survive the first half of the scenario
'''Unit Acquisition:'''
*Lacus unlocks the SEED pilot skill
*Duel Gundam (Yzak)

|-
| colspan="3" class="fc-std-sc" |'''第５２話：世界の中心でアイを叫んだもの Scenario 52 - The One Who Cried "Love" at the Heart of the World'''

|-
| colspan="3" |'''Victory Condition:'''
*1st Part: (1)(2)(3) Defeat all enemies (4)(5) EVA Unit 1 is defeated
*2nd Part: EVA Unit 1 is defeated
'''Defeat Condition:'''
*1st Part: (1) Any ally is defeated; (2) Shinji is defeated; (3)(4) Ally battleship is defeated; (5) Ally battleship is defeated, Reach the 6th turn after the "Cross" grows from the Earth
*2nd Part: Shinji is defeated
'''Skill Point:''' Asuka survives for 2 full turns. '''Secret Requirements:'''
*Neue Ziel
**Kou must have 40 or more kills than Keith by the end of the scenario.
*Val Varo
**Keith must have 20 or more kills than Kou by the end of the scenario.
*Gerbera Tetra
**Kou and Keith's killcounts must be within 6 of one another by the end of the scenario.
*Quin Mantha
**The sum of Ple and Ple 2's killcounts must be a number ending in 5 at the end of the scenario.
*Haman's Qubeley
**The sum of Ple and Ple 2's killcounts must be a number ending in 0 at the end of the scenario.
*MP Qubeleys
**The sum of Ple and Ple 2's killcounts must be a number ending in 7 at the end of the scenario.
*Doven Wolf
**The sum of Beecha and Mondo's killcounts must be a number ending in 0 at the end of the scenario.
*Geymalk
**The sum of Beecha and Mondo's killcounts must be a number ending in 5 at the end of the scenario.
*EVA-01 F-Type Equipment
**Shinji must defeat Zeruel on the first part of this scenario.
**Shinji must defeat EVA-01 on the second part of this scenario.
**The sum of Shinji, Asuka, and Rei's killcounts must be 250 or more, or 150 or more if you met the requirement on scenario 45.
*Hi-Nu Gundam
**Amuro and Bright's combined killcounts must be greater than 120 by the end of this scenario.
*Sazabi
**Amuro and Kamille's killcount must be 50 or more each at the end of this scenario. You will receive it at the start of next scenario.
*Strike Rouge IWSP
**If you did not receive it on Scenario 45, the sum of Cagalli, Julie, Mayura, and Asagi's killcounts must be 100 or more by the end of the scenario.
*Destroid Monster
**If you did not receive it on Scenario 31, the sum of Fokker, Hikaru, and Kakizaki's killcounts must be 100 or more by the end of this scenario.
'''Unit Acquisition:'''
*Evangelion Unit 0 (Kaowru)
*Evangelion Unit 0 loses the "Lance of Longinus" attack

|-
| colspan="3" class="fc-prologue" |'''Beyond this point, losing Ideon results in a Game Over'''
|-
| colspan="3" class="fc-std-sc" |'''第５３話：出航！銀河殴り込み艦隊！ Scenario 53 - The Galactic Assault Fleet Takes Sail!'''

|-
| colspan="3" |'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' 230 enemy units shot down by turn 7. '''Secret Requirements:''' '''Unit Acquisition:'''
*All secret units and parts are given after the stage begins <ul><li>Neue Ziel OR Val Varo OR Gerbera Tetra</li><li>Quin Mantha OR Haman's Qubeley OR Mass Production Qubeley (x2)</li><li>Doven Wolf OR Geymalk</li><li>Strike Rougue IWSP</li><li>Hi-Nu Gundam</li><li>Sazabi</li><li>Destroid Monster</li><li>F-Type Equipment for Evangelion Unit 1</li><li>Atomic Bazooka parts for GP-02</li><li>Heavy Weapon System for Nu Gundam</li><li>Full Armor Parts for ZZ Gundam</li></ul>
*MP Nu Gundam
**Fin Funnel parts for MP Nu Gundam
*Gunbuster adds Kazumi as a Subpilot
**Gunbuster gains the "Super Inazuma Kick" attack
*Ra Cailum gains the "Nuclear Missile" MAP and ALL attacks

|-
| colspan="3" class="fc-std-sc" |'''第５４話：神に守られし星 Scenario 54 - The Planet Guarded by the Gods'''

|-
| colspan="3" |'''Victory Condition:'''
*1st Part: (1) Defeat all enemies; (2) The SRX Team rescues [https://akurasu.net/wiki/Super_Robot_Wars/Alpha_3/Info_Dump#Finding_Aya_on_Scenario_54 Aya]; (3) Jumora is defeated
*2nd Part: Bemidoban is defeated
'''Defeat Condition:'''
*1st Part: (1)(2) Ally battleship is defeated, Ryusei or Viletta are defeated; (3) Ally battleship is defeated, Ryusei, Viletta, Baran, or Lyria are defeated
*2nd Part: Sanger is defeated
**2nd Part (Touma Route): Touma is defeated
'''Skill Point:''' Clear the map within 10 turns, with both Hermoz defeated '''Secret Requirements:''' '''Unit Acquisition:'''
*Banpreios adds Aya as a Subpilot
**Branpreios gains the "Tenjou Tenge Nendou Musou-ken" attack
**Branpreios and R-GUN Powered gain the "Tenjou Tenge Ichigeki Hissatsu-ho" combination attack
*Shumel (Lyria)
*Bemidoban (Baran)

|-
| colspan="3" class="fc-std-sc" |'''第５５話：まつろわぬ神 Scenario 55 - The God Who Resists Order'''

|-
| colspan="3" |'''Victory Condition:'''
*1st Part: (1) Defeat all enemies; (2) Defeat Gebel GanEden
*2nd Part: (1) Defeat all enemies; (2) Defeat Gebel GanEden
'''Defeat Condition:'''
*1st Part: (1)(2) Ally battleship is defeated
*2nd Part: (1)(2) Ally battleship is defeated
'''Skill Point:''' Within 6 turns, defeat both Zfiruds '''Secret Requirements:''' '''Unit Acquisition:'''

|-
| colspan="3" class="fc-std-sc" |'''第５６話：終わりなき総力戦 Scenario 56 - Unending Total War'''

|-
| colspan="3" |'''Victory Condition:'''
*1st Part: Drowa Zan is defeated within 5 turns
*2nd Part: (1) Soloship move next to the Bairal Jinn; (2) Any unit reaches the designated point
'''Defeat Condition:'''
*1st Part: Ally battleship is defeated, 6th turn is reached
*2nd Part: (1)(2) Ally battleship is defeated
'''Skill Point:''' Clear the map within 7 turns. '''Secret Requirements:'''
*Gije & Ganga Rube
**You must pick the Fight The Buff Clan option at the end of the scenario.
*Bad Ending Route
**On New Game+, choose to fight (first option)
'''Unit Acquisition:'''

|- class="fc-route-h"
| width="40%" |'''Fight The Buff Clan''' Ideon, Getter Robo Combattler V, Voltes V, Daimos Daitarn 3 Gundam (0083, Zeta, ZZ, CCA, Wing, SEED)
| width="40%" |'''Fight The STMC''' Mazinger (Z, Great), Steel Jeeg, Raiden Goshogun, Dancouga, Gaiking Macross (DYRL, Plus, 7) Gunbuster, Evangelion, GaoGaiGar Virtual On
| width="20%" |'''Bad Ending '''

|-
| class="fc-route1" |'''第５７話：憎しみの環の中で Scenario 57 - In a Circle of Hatred'''
| class="fc-route3" |'''第５７話：終わりの始まり Scenario 57 - The Beginning of the End'''
| class="fc-prologue" |'''イデ発動ルート最終話：銀河に君と''' '''Ide Activation Final Scenario - With You In The Galaxy'''

|-
|'''Victory Condition:'''
*1st Part: (1) Defeat all enemies; (2) Soloship reaches the designated point
*2nd Part: Defeat all enemies within (11 (E) / 9 (N) / 7 (H)) turns
'''Defeat Condition:'''
*1st Part: (1)(2) All allies are defeated
*2nd Part: Turn (12 (E) / 10 (N) / 8 (H)) is reached, Ally battleship is defeated
'''Skill Point:''' Defeat all enemies within (10 (E) / 8 (N) / 6 (H)) turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Ganga Rube (Gije)

|'''Victory Condition:''' (1)(2) Defeat all enemies '''Defeat Condition:''' (1) Eltrium is defeated; (2) Ally battleship is defeated '''Skill Point:''' Defeat all enemies within 7 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Eltrium (Tashiro, Deputy Chief)

| rowspan="4" |'''Victory Condition:''' Bairal Jinn is defeated '''Defeat Condition:''' Ally battleship is defeated '''Secret Requirements:''' '''Unit Acquisition:'''

|-
| class="fc-route1" |'''第５８話：発動 Scenario 58 - Activation'''
| class="fc-route3" |'''第５８話：死闘、未来を懸けて Scenario 58 - The Mortal Struggle for the Future'''

|-
|'''Victory Condition:'''
*1st Part: Bairal Jinn is defeated
*2nd Part: Bairal Jinn is defeated
'''Defeat Condition:'''
*1st Part: Ally battleship is defeated
*2nd Part: Ally battleship is defeated
'''Skill Point:''' Destroy the Bairal Jinn within six turns. '''Secret Requirements:''' '''Unit Acquisition:'''

|'''Victory Condition:''' (1)(2) Defeat all enemies '''Defeat Condition:''' (1) Ally battleship is defeated; Drowa Zan is defeated, Ally battleship is defeated(2) '''Skill Point:''' All Buff Clan units survive the stage. '''Secret Requirements:''' '''Unit Acquisition:'''

|}
 

==Stages 59 - END==
{| width="100%"
|-
| colspan="2" class="fc-std-sc" |'''第５９話：果てしなき流れの果てに Scenario 59 - At the End of the Unending Flow'''

|-
| colspan="2" |'''Victory Condition:'''
*1st Part: Reach the 11th turn
*2nd Part: Defeat all enemies, 6th turn is reached
'''Defeat Condition:'''
*1st Part: Ally battleship is defeated, Any enemy enters the designated area
*2nd Part: Any enemy enters the designated area, Ally battleship is defeated, Noriko or Jung are defeated
'''Skill Point:''' Defeat all enemies within 5 turns. '''Secret Requirements:''' '''Unit Acquisition:'''

|- class="fc-route-h"
| width="50%" |'''Normal Ending - 56 Skill Points or less, OR turn count 421 or more'''
| width="50%" |'''Good Ending - 57 Skill Points or more AND turn count 420 or less'''

|-
| class="fc-route1" |'''最終話: 終焉の銀河 Final Scenario - A Galaxy of Death'''
| class="fc-route3" |'''最終話: 今遥か遠い彼方… Final Scenario - Now, The Faraway Yonder'''

|-
|'''Victory Condition:''' (1) ??? is destroyed; (2) Kaiser Ephres is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated '''Secret Requirements:''' '''Unit Acquisition:'''

|'''Victory Condition:''' (1) ??? is destroyed; (2)(3) Kaiser Ephres is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated; (3) Irui is defeated '''Secret Requirements:''' '''Unit Acquisition:'''
*Nashim Gan Eden (Irui)

|}

Super Robot Wars/Alpha 3/Flow Chart

2023-06-08T17:25:56Z

KomodoWork:

Units and Pilots in Black join your team. 
Units and Pilots in Orange are available for that stage, then leave. 
Units and Pilots in Blue have special requirements. Check the [[../Secrets|Secrets]] page for more details. 
Units and Pilots in Red previously joined, but from this point, are rendered unusable. Those lost permanently are marked so, while others rejoin later on. 
Information in Green are upgrades for units already in your party.

==Stages 01 - 18==
{| width="100%"
|- class="fc-route-h"
| width="25%" |'''Touma Route'''
| width="25%" |'''Kusuha Route'''
| width="25%" |'''Cobray Route'''
| width="25%" |'''Selena Route'''

|-
| class="fc-route1" |'''第１話：闘志、炎に燃ゆる Scenario 1 - Within the Flames, Fighting Spirit Rises'''
| class="fc-route2" |'''第１話：出撃！鋼の龍虎 Scenario 1 - Launch! Dragon and Tiger of Steel'''
| class="fc-route3" |'''第１話：虚空からの転生 Scenario 1 - Reincarnated from the Void'''
| class="fc-route4" |'''第１話：シークレット・ミッション Scenario 1 - Secret Mission'''

|-
|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Any allied unit is defeated '''Skill Point:''' Defeat all enemies in 3 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Raioh (Touma)
*GaoGaiGar (Guy)
*Goldymarg (Goldymarg)
*HyoRyu (HyoRyu)
*EnRyu (EnRyu)

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Any allied unit is defeated '''Skill Point:''' Defeat all enemies in 2 turns '''Secret Requirements:'''
*Bullet
**You must be playing as Kusuha to recruit Bullet.
'''Unit Acquisition:'''
*Gouryu Kai (Kusuha)
*Raikou Kai (Bullet)
*Mazinkaiser (Kouji)
*Diana A (Sayaka)
*Shin Getter (Ryoma, Hayato, Benkei)
*Lady Command (Michiru)

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' (1) Werkbau is defeated; (2) Werkbau is defeated, ally battleship is defeated '''Skill Point:''' Defeat all enemies in 5 turns after enemy reinforcements show up '''Secret Requirements:'''
*Arado and Seolla
**You must be playing as Cobray to recruit Arado and Seolla.
'''Unit Acquisition:'''
*Werkbau (Cobray)
*Nu Gundam (Amuro)
*Ra Cailum (Bright, Torres)
*MP Nu Gundam (Kayra)
*Jegan (Katz)
*Incom & Funnel parts for MP Nu Gundam

|'''Victory Condition:''' (1) All enemies except Salamis Kai shot down; (2) R-Gun Powered shot down '''Defeat Condition:''' (1) Selena shot down, Salamis Kai shot down; (2) Selena shot down '''Skill Point:''' Defeat all enemies except the Salamis Kai in 4 turns '''Secret Requirements:'''
*Ibis and Slay
**You must be playing as Selena to recruit Ibis and Slay.
'''Unit Acquisition:'''
*AS Soleares (Selena, Elma)
*Albion (Synapse, Paserov)
*GP03 Dendrobium (Kou)
*GM Cannon II (Keith)
*GM Custom (Burning)
*GM Custom (Bate)
*GM Custom (Monsha)
*GM Cannon II (Adel)
*Zeta Gundam (Kamille)
*Re-GZ BWS (Four)
*Methuss (Fa)
*Super Gundam (Emma)
*Armed Fortress Orchis parts for Gundam Stamen
*G Defensor parts for Gundam Mk-II

|-
| class="fc-route1" |'''第２話: さらばGGG、さらば勇者 Scenario 2 - Farewell, GGG! Farewell, Braves!'''
| class="fc-route2" |'''第２話: 新たなる侵略者！立ち上がれV Scenario 2 - New Invaders! Rise Up, V!'''
| class="fc-route3" |'''第２話: 血の狼煙 Scenario 2 - Beacon Fire of Blood'''
| class="fc-route4" |'''第２話: フラッシュ・デイ Scenario 2 - Flash Day'''

|-
|'''Victory Condition:''' Defeat all enemies; Defeat ZX-01 '''Defeat Condition:''' Any allied unit is defeated '''Skill Point:''' Defeat the 4 Zonders in 2 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*GaoGaiGar (Guy)
*J-Der (J, Tomoro)
*Great Mazinger (Tetsuya)
*Venus A (Jun)
*Boss Borot (Boss, Nuke, Mucha)
*Kotetsu Jeeg (Jeeg)
*Big Shooter (Miwa)

|'''Victory Condition:''' (1) Defeat all enemies, (2) Defeat Dangel '''Defeat Condition:''' (1) Hyouma defeated (2) Any Allied Unit is defeated '''Skill Point:''' Defeat all enemies in 3 turns, do not lose any Federation Army squads '''Secret Requirements:''' '''Unit Acquisition:'''
*Combattler V (Hyoma, Juzo, Daisaku, Chizuru, Kosuke)
*Jegan (Federation Soldier) x 3

|'''Victory Condition:''' (1) Defeat the Magellan Kai-class Battleship (2) Defeat the Magellan Kai-class Battleship and Nuclear Missiles '''Defeat Condition:''' (1) Any ally unit is defeated (2) Nuclear Missiles reach the marked area on the map '''Skill Point:''' Defeat the enemy missiles and battleship in 7 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Clop-class (Federation Captain)
*Wildfalken (Seolla)
*MP Nu Gundam (Cobray)
*ZZ Gundam (Judau)
*Re-GZ BWS (Roux)
*Albion (Synapse, Paserov)
*GP03 Dendrobium (Kou)
*GM Cannon II (Keith)
*GM Custom (Burning)
*GM Custom (Bate)
*GM Custom (Monsha)
*GM Cannon II (Adel)
*Zeta Gundam (Kamille)
*Re-GZ BWS (Four)
*Methuss (Fa)
*Super Gundam (Emma)
*Armed Fortress Orchis parts for Gundam Stamen
*G Defensor Parts for Gundam Mk-II

|'''Victory Condition:''' Defeat any enemy battleship '''Defeat Condition:''' (1) Allied battleship is defeated; (2) Allied battleship is defeated, Selena is defeated '''Skill Point:''' Defeat the enemy battleship in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*ZZ Gundam (Judau)
*Re-GZ BWS (Roux)
*Nu Gundam (Amuro)
*Ra Cailum (Bright)
*Jegan (Katz)
*MP Nu Gundam (Keyra)
*AS Soleares (Selena, Elma)
*Incom & Funnel parts for MP Nu Gundam

|-
| colspan="4" class="fc-std-sc" |'''第３話: 逆襲！機界31原種 Scenario 3 - Counterattack! The 31 Machine Primevals!'''

|-
| colspan="4" |'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' (1) Ally battleship is defeated, One of the Machine Primevals reaches the edge of the map; (2) Ally battleship is defeated, One of the Machine Primevals reaches the edge of the map, J is defeated '''Skill Point:''' Defeat all enemies in 6 turns '''Secret Requirements:''' '''Unit Acquisition (Touma & Kusuha):'''
*J-Ark (J, Tomoro)
*Nu Gundam (Amuro)
*Ra Cailum (Bright, Torres)
*Jegan (Katz)
*MP Nu Gundam (Keyra)
*Albion (Synapse, Paserov)
*GP03 Dendrobium (Kou)
*GM Cannon II (Keith)
*GM Custom (Burning)
*GM Custom (Bate)
*GM Custom (Monsha)
*GM Cannon II (Adel)
*Zeta Gundam (Kamille)
*Re-GZ BWS (Four)
*Methuss (Fa)
*Super Gundam (Emma)
*Incom & Funnel parts for MP Nu Gundam
*Armed Fortress Orchis parts for Gundam Stamen
*G Defensor Parts for Gundam Mk-II
'''Unit Acquisition (Cobray & Selena):'''
*J-Ark (J, Tomoro)
*Mazinkaiser (Kouji)
*Diana A (Sayaka)
*Great Mazinger (Tetsuya)
*Venus A (Jun)
*Combattler V (Hyoma, Juzo, Daisaku, Chizuru, Kosuke)
*Koutetsu Jeeg (Jeeg)
*Big Shooter (Miwa)
*Shin Getter (Ryoma, Hayato, Benkei)
*Lady Command (Michiru)

|-
| colspan="4" class="fc-std-sc" |'''第４話：地獄門、開く Scenario 4 - The Gates of Hell Open'''

|-
| colspan="4" |'''Victory Condition:'''
*1st Part: Allied Battleship reaches the escape point in 5 turns, All Enemies are defeated in 5 turns
*2nd Part: Defeat all enemies
'''Defeat Condition:'''
*1st Part: Allied Battleship is defeated, Turn 6 starts
*2nd Part: SRX is defeated
'''Skill Point:''' Defeat all enemies in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*SRX (Damaged) (Ryuusei, Rai, Aya)

|-
| colspan="4" class="fc-std-sc" |'''第５話: 地球圏絶対防御線 Scenario 5 - The Earth Sphere’s Absolute Defense Line'''

|-
| colspan="4" |'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' (1) Ally battleship is defeated (2) Any allied unit is defeated '''Skill Point:''' Clear the stage in 6 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Mobieus Zero (Mwu)
*All Char's Counter Attack, Stardust Memory, and Zeta Gundam units are lost <ul><li>Nu Gundam(Amuro)</li><li>Ra Cailum (Bright, Torres)</li><li>MP Nu Gundam (Keyra)</li><li>Albion (Synapse, Paserov)</li><li>GP03 Dendrobium (Kou)</li><li>GM Cannon II (Keith)</li><li>GM Custom (Burning)</li><li>GM Custom (Bate)</li><li>GM Custom (Monsha)</li><li>GM Cannon II (Adel)</li><li>Zeta Gundam (Kamille)</li><li>Re-GZ BWS (Four)</li><li>Methuss (Fa)</li><li>Super Gundam (Emma)</li><li>Jegan (Katz)</li></ul>

|- class="fc-route-h"
|'''Touma Route''' Great Mazinger, Venus A, Boss Borot Steel Jeeg, Big Shooter
|'''Kusuha Route''' Getter Robo G, Lady Command Mazinger Z, Diana A Combattler V
|'''Cobray Route''' ZZ Gundam, ReGZ (BWS) Mobieus Zero
|'''Selena Route'''
|-
| class="fc-route1" |'''第６話：平和、遥か遠く Scenario 6 - A Faraway Peace'''
| class="fc-route2" |'''第６話：北米戦線、異常アリ Scenario 6 - Abnormalities on the North American Front'''
| class="fc-route3" |'''第６話：GUNDAM出撃 Scenario 6 - Gundam, Sortie'''
| class="fc-route4" |'''第６話：ザ・ビギニング Scenario 6 - The Beginning'''

|-
|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Any ally is defeated '''Skill Point:''' Defeat all enemies in 5 turns; Defeat the Yamata no Orochi last '''Secret Requirements:''' '''Unit Acquisition:'''
*GaiGar (Gai)
*Mic Sounders XIII (Mic Sounders XIII)

|'''Victory Condition:''' (1) Ally reaches the designated area; (2) Defeat all enemies '''Defeat Condition:''' Any ally defeated '''Skill Point:''' Reach target location without engaging in combat '''Secret Requirements:''' '''Unit Acquisition:'''
*Mazinkaiser → Mazinger Z (Kouji)
*Shin Getter Robo → Getter Robo G (Ryoma, Hayato, Benkei) 
*Dancouga (Shinobu, Sara, Masato, Ryo)

|'''Victory Condition:'''
*1st Part: Sigu is defeated, Vesalius is defeated
*2nd Part: Defeat all enemies 
'''Defeat Condition:'''
*1st Part: Any ally is defeated
*2nd Part: Any ally is defeated 
'''Skill Point:''' Accomplish either objective in 4 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Clop Class Battleship (Federation Officer)
*Wing Gundam Zero Kai (Heero)
*Gundam Deathscythe Hell Kai (Duo)
*Gundam Sandrock Kai (Quatre)
*Taurus (Hilde)
*Strike Gundam (Kira)

|'''Victory Condition:''' (1) AS Soleares reaches the designated point in 4 turns; (2) Defeat all enemies '''Defeat Condition:''' (1) Begin turn 5 without meeting victory conditions, Any ally is defeated; (2) Any ally is defeated '''Skill Point:''' Defeat all enemies in 4 turns and get the AS Soleares to the target square '''Secret Requirements:''' '''Unit Acquisition:'''
*CGUE (Rau)
*GINN (ZAFT Soldier) x 2
*Vesarius (Ades)

|-
| class="fc-route1" |'''第７話：燃えろ宙！妖花フローラの挑戦 Scenario 7 - Space Burns! The Enchanting Flora’s Challenge!'''
| class="fc-route2" |'''第７話：怒りの獣、野生の咆哮 Scenario 7 - The Wild Roar of the Raging Beast'''
| class="fc-route3" |'''第７話：崩壊の大地 Scenario 7 - Collapsing Land'''
| class="fc-route4" |'''第７話：ワンズ・ジャスティス Scenario 7 - One’s Own Justice'''

|-
|'''Victory Condition:''' 
*1st Part: Defeat all enemies
*2nd Part: Defeat all enemies
'''Defeat Condition:''' 
*1st Part: Any ally defeated
*2nd Part: Any ally defeated
'''Skill Point:''' Defeat all enemies in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*AnRyu (AnRyu)
*KouRyu (KouRyu)

|'''Victory Condition:''' (1) Defeat all enemies; (2) Defeat Dangel '''Defeat Condition:''' Any ally is defeated '''Skill Point:''' Defeat all Zubanzas, Boazan Flying Saucers, and Red Baloms within 4 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Black Wing (Alan)

|'''Victory Condition:''' (1) Defeat all enemies; (2) Archangel reaches the designated point, Defeat all enemies '''Defeat Condition:''' (1) Mwu is defeated; (2) Ally battleship is defeated, Kira or Mwu are defeated '''Skill Point:''' Defeat all enemies in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Strike Gundam (Kira)
*Archangel (Murrue, Natarle)
*Aile, Sword and Launcher Striker packs for Strike Gundam

|'''Victory Condition:''' Any ally reaches the designated point '''Defeat Condition:''' Any ally is defeated '''Skill Point:''' Defeat all enemies in 5 turns and get an allied unit to the target square '''Secret Requirements:''' '''Unit Acquisition:'''
*Altron Gundam (Wufei)
*Gundam Heavyarms Kai (Trowa)
*CGuE (Rau)
*Vesarius (Ades)
*Aegis Gundam (Athrun)
*Blitz Gundam (Nicol)
*Buster Gundam (Dearka)
*Duel Gundam (Yzak)

|-
| class="fc-route1" |'''第８話：立ち上がれ！勇気ある者達 Scenario 8 - Stand Up, People of Courage!'''
| class="fc-route2" |'''第８話：輝け！不死身の勇者 Scenario 8 - Shine, Undying Hero!'''
| class="fc-route3" |'''第８話：誘う声 Scenario 8 - An Inviting Voice'''
| class="fc-route4" |'''第８話：インビジブル・イントルーダー Scenario 8 - Invisible Intruder'''

|-
|'''Victory Condition:''' (1) Defeat all enemies; (2) ZX-02 is defeated '''Defeat Condition:''' (1) Any ally is defeated; (2) Gai is defeated, J is defeated '''Skill Point:''' Defeat all enemies in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*GaiGar → GaoGaiGar
*Mic Sounders XIII gains "Disc P", "Disc M", and "Disc X" attacks
*Goldymarg (Goldymarg)
*HyoRyu (HyoRyu)
*EnRyu (EnRyu)
*Big Volfogg (Big Volfogg)

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' (1) Any ally is defeated; (2) Akira is defeated '''Skill Point:''' Defeat the Bramble (retreats at 4000HP (E) / 6000HP (N) / 8000HP (H)) '''Secret Requirements:''' '''Unit Acquisition:'''
*Raideen (Akira)
*Bluegar (Jinguji, Mari)

|'''Victory Condition:'''
*1st Part: (1) Vesalius is defeated; (2) Defeat all enemies
*2nd Part: (1) Defeat all enemies; (2) Defeat all enemies except Valk Baal 
'''Defeat Condition:'''
*1st Part: Ally battleship is defeated, Seolla or Cobray are defeated
*2nd Part: Any ally is defeated 
'''Skill Point:''' Defeat Aegis, Duel, Buster, and Blitz Gundams in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Zeta Gundam (Kamille)
*Re-GZ BWS (Four)
*Methuss (Fa)
*Super Gundam (Emma)
*Ra Cailum (Bright, Torres)
*MP Nu Gundam (Cobray)
*Werkbau (Cobray)
*G Defensor parts for Gundam Mk-II

|'''Victory Condition:''' Reach turn 6 '''Defeat Condition:''' Any ally is defeated '''Skill Point:''' Defeat all the Jegans '''Secret Requirements:''' '''Unit Acquisition:'''
*CGuE (Rau)
*Vesarius (Ades)
*Aegis Gundam (Athrun)
*Blitz Gundam (Nicol)
*Buster Gundam (Dearka)
*Duel Gundam (Yzak)

|-
| class="fc-route1" |'''第９話：内なる修羅 Scenario 9 - Demons of War Within'''
| class="fc-route2" |'''第９話：再会！ニューヨーク解放戦 Scenario 9 - Reunion! The Battle to Retake New York'''
| class="fc-route3" |'''第９話：正義の在処 Scenario 9 - Where Justice Can Be Found'''
| class="fc-route4" |'''第９話：アベンジャー Scenario 9 - Avenger'''

|-
|'''Victory Condition:''' (1) Defeat all enemies; (2) Defeat Raioh '''Defeat Condition:''' (1) Any ally defeated; (2) Sanger is defeated '''Skill Point:''' Defeat the Bramble in 4 turns (retreats at 4000HP (E) / 6000HP (N) / 8000HP (H)) '''Secret Requirements:''' '''Unit Acquisition:'''
*Dygenguar (Sanger)
*Huckebein Mk-III Trombe (Ratsel)
*Raideen (Akira)
*Bluegar (Jingunji, Mari)
*Mazinger Z (Kouji)
**Mazinger Z (Kouji) and Great Mazinger (Tetsuya) gain the "Double Mazinger Blade" and "Double Burning Fire" combination attacks
*Diana A (Sayaka)
*Getter Robo G (Ryoma, Hayato, Benkei)
*Lady Command (Michiru)
*Combattler V (Hyoma, Juzo, Daisaku, Chizuru, Kosuke)

|'''Victory Condition:''' (1) Defeat all enemies; (2) Dancouga reaches the designated point; (3) Defeated Deathgaia, Dangel, and Warchamedes '''Defeat Condition:''' (1) Shinobu, Kusuha, or Bullet are defeated; (2) Shinobu, Kusuha, Bullet, or Alan are defeated; (3) Alan is defeated '''Skill Point:''' Clear the map in 8 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Black Wing (Alan)
*Dygenguar (Sanger)
*Huckebein Mk-III Trombe (Ratsel)

|'''Victory Condition:''' (1) Vesalius is defeated; Reduce the Muge Battleship under 2000 HP before it reaches the edge of the map '''Defeat Condition:''' (1) Ally battleship is defeated; (2) Muge Battleship reaches the western edge of the map '''Skill Point:''' Defeat all enemies before reducing the Muge Mothership's HP below 2000 or defeating it '''Secret Requirements:''' '''Unit Acquisition:'''

|'''Victory Condition:''' (1) Reduce the Archangel's HP to 50% or less, Defeat all enemies besides the Archangel; (2) Reduce the Varuch Ishar to 4000 HP or less. '''Defeat Condition:''' Any ally is defeated '''Skill Point:''' Defeat the Varuch Ishar (flees at 4000 HP) '''Secret Requirements:''' '''Unit Acquisition:'''
*CGuE (Rau)
*Vesarius (Ades)
*Aegis Gundam (Athrun)
*Blitz Gundam (Nicol)
*Buster Gundam (Dearka)
*Duel Gundam (Yzak)

|-
| class="fc-route1" |'''第１０話：激震の地底帝国 Scenario 10 - Tremors in the Underground Empire'''
| class="fc-route2" |'''第１０話：龍を喰らうもの Scenario 10 - That Which Devours the Dragon'''
| class="fc-route3" |'''第１０話：消えていく光 Scenario 10 - The Fading Light'''
| class="fc-route4" |'''第１０話：グッバイ・フレンズ Scenario 10 - Goodbye, Friends'''

|-
|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' All allies defeated, Science Fortress Lab destroyed '''Skill Point:''' Clear the map without the Science Fortress Lab taking damage '''Secret Requirements:''' '''Unit Acquisition:'''
*Raioh loses the "System LIOH" ability
*Raioh gains the "Rising Meteor" attack
*Dygenguar (Sanger)
*Huckebein Mk-III Trombe (Ratsel)

|'''Victory Condition:''' (1) Sanger is defeated; (2)(3) Defeat all enemies; (4)(5) ZX-02 is defeated '''Defeat Condition:''' (1) Bullet is defeated; (2) Sanger or Rastel are defeated; (3) Any ally is defeated; (4) Guy, Sanger, or Rastel are defeated; (5) Guy, J, Sanger, or Rastel are defeated '''Skill Point:''' Reduce Shin RyuOuKi to below 10000 HP within 3 turns of its arrival '''Secret Requirements:''' '''Unit Acquisition:'''
*Dygenguar (Sanger)
*Huckebein Mk-III Trombe (Ratsel)
*GaiGar (Guy)
*GaoGaiGar (Guy)
*Mic Sounders XIII (Mic Sounders XIII)
*Goldymarg (Goldymarg)
*HyoRyu (HyoRyu)
*EnRyu (Enryu)
*Volfogg (Volfogg)
*Great Mazinger (Tetsuya)
*Venus A (Jun)
*Boss Borot (Boss, Mucha, Nuke)
*Kotetsu Jeeg (Jeeg)
*Big Shooter (Miwa)
*Stealth Gao II parts for GaoGaiGar
*Gunbot parts for Volfogg

|'''Victory Condition:''' (1) Reduce the Blitz Gundam to under 7000HP; (2) The Gamow is defeated; (3) The Gamow is defeated and Imperial Guard are defeated '''Defeat Condition:''' (1)(2) Any ally is defeated; (3) Ally battleship is defeated '''Skill Point:''' Defeat the Gamow (retreats at 4000HP (E) / 6000HP (N) / 8000HP (H)) '''Secret Requirements:''' '''Unit Acquisition:'''
*Qubeley Mk-II (Puru)
*Qubeley Mk-II (Puru Two)
*Hyaku Shiki (Beecha)
*Gundam Mk-II (Elle)
*Jegan (Mondo)
*Megarider (Iino)
*YF-19 (Isamu)
*YF-21 (Guld)

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' (1) Any ally is defeated; (2) Ally battleship is defeated; (3) Ally battleship is defeated, Isamu or Guld are defeated '''Skill Point:''' Clear the map in 6 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Zeta Gundam (Kamille)
*Methuss (Fa)
*ReGZ (Four)
*Super Gundam (Emma)
*Mobius Zero (Mwu)
*Wing Gundam Zero Kai (Heero)
*Gundam Sandrock Kai (Quatre)
*Gundam Deathscythe Hell Kai (Duo)
*Taurus (Hilde)
*ZZ Gundam (Judau)
*ReGZ BWS (Roux)
*Qubeley Mk-II (Puru)
*Qubeley Mk-II (Puru Two)
*Hyaku Shiki (Beecha)
*Gundam Mk-II (Elle)
*Jegan (Mondo)
*Megarider (Iino)
*YF-19 (Isamu)
*YF-21 (Guld)

|-
| class="fc-route1" |'''第１１話：戦場の邂合、そして決別 Scenario 11 - An Battlefield Encounter, and Then a Departure'''
| class="fc-route2" |'''第１１話：新たなる人類 Scenario 11 - A New Mankind'''
| class="fc-route3" |'''第１１話：君と戦場で Scenario 11 - On the Battlefield with You'''
| class="fc-route4" |'''第１１話：パワー・ジャンクション Scenario 11 - Power Junction'''

|-
|'''Victory Condition:''' (1) Defeat all enemies; (2) Defeat Vesalius '''Defeat Condition:''' Ally battleship is defeated, Kira or Mwu are defeated '''Skill Point:''' Defeat all enemies in 7 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Archangel (Murrue)
*Strike Gundam (Kira)
*Moebius Zero (Mwu)
*Stealth Gao II Parts for GaoGaiGar
*Aile, Sword, and Launcher Striker packs for Strike Gundam

|'''Victory Condition:''' (1) Defeat all enemies; (2) Vesalius is defeated '''Defeat Condition:''' (1) Ally battleship is defeated, Kira or Mwu are defeated; (2) Ally battleship is defeated '''Skill Point:''' Defeat all enemies in 7 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Strike Gundam (Kira)
*Mobeius Zero (Mwu)
*Archangel (Murrue, Natarle)
*YF-19 (Isamu)
*YF-21 (Guld)
*Aile, Sword, and Launcher Striker packs for Strike Gundam

|'''Victory Condition:''' (1) Defeat all enemies (2) ZX-02 is defeated '''Defeat Condition:''' (1) Kira is defeated; (2) Any ally is defeated '''Skill Point:''' Defeat all enemies in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Wildburger (Arado)
*Great Mazinger (Tetsuya)
*Venus A (Jun)
*Boss Borot (Boss)
*Dancouga (Shinobu, Sarah, Masato, Ryo)
*Raideen (Akira)
*Bluegar (Jingunji)
*Mazinger Z (Kouji)
*Diana A (Sayaka)
*Getter Robo G (Ryoma, Hayato, Benkei)
*Lady Command (Michiru)
*Star Gaogaigar (Gai)
*Goldymarg (Goldymarg)
*Mic Sounders the 13th (Mic)
*Hyoryu (Hyoryu)
*Enryu (Enryu
*Big Volfogg (Volfogg)

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Defeat all enemies in 7 turns '''Secret Requirements:''' '''Unit Acquisition:'''

|-
| class="fc-route1" |'''第１２話：守るべきモノ Scenario 12 - What You Must Protect'''
| class="fc-route2" |'''第１２話：別れの宇宙 Scenario 12 - Farewells in Space'''
| class="fc-route3" |'''第１２話：ディーンの火 Scenario 12 - The Flames of Deen'''
| class="fc-route4" |'''第１２話：コンクルージョン Scenario 12 - Conclusion'''

|-
|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' All enemies defeated '''Skill Point:''' Defeat all enemies in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Gundam Wing Zero (Heero)
*Gundam Deathscythe Hell Kai (Duo)
*Gundam Sandrock Kai (Quatre)
*Gundam Heavyarms Kai (Trowa)
*Altron Gundam (Wufei)
*Taurus (Hilde)
*Zeta Gundam (Kamille)
*Re-GZ BWS (Four)
*Methuss (Fa)
*Gundam Mk-II (Emma)
*ZZ Gundam (Judau)
*Qubeley Mk-II (Puru)
*Qubeley Mk-II (Puru Two)
*Hyaku Shiki (Beecha)
*Gundam Mk-II (Elle)
*Jegan (Mondo)
*Megarider (Iino)
*YF-19 (Isamu) (After stage)
*YF-21 (Guld) (After stage)
*G Defensor parts for Gundam Mk-II

|'''Victory Condition:''' (1) Defeat all enemies; (2) Defeat Shin RyoOhKi; (3) Defeat the Imperial Guard '''Defeat Condition:''' (1)(2) Any ally is defeated; (3) Ally battleship is defeated '''Skill Point:''' Defeat Shin RyuOhKi before Victory Conditions are met '''Secret Requirements:''' '''Unit Acquisition:'''
*Gundam Wing Zero Kai (Heero)
*Gundam Deathscythe Hell Kai (Duo)
*Gundam Sandrock Kai (Quatre)
*Gundam Heavyarms Kai (Trowa)
*Altron Gundam (Wufei)
*Taurus (Hilde)
*Zeta Gundam (Kamille)
*Re-GZ BWS (Four)
*Methuss (Fa)
*Gundam Mk-II (Emma)
*ZZ Gundam (Judau)
*Qubeley Mk-II (Puru)
*Qubeley Mk-II (Puru Two)
*Hyaku Shiki (Beecha)
*Gundam Mk-II (Elle)
*Jegan (Mondo)
*Megarider (Iino)
*G Defensor parts for Gundam Mk-II

|'''Victory Condition:''' (1) Bramble, Magnum, and Zangaioh are defeated; (2) Defeat all enemies; (3) Defeat Valk Baal '''Defeat Condition:''' (1) Ally battleship is defeated, Arado is defeated; (2) Cobray, Arado or Seolla are defeated; (3) Cobray, Viletta, Sanger, or Rastel are defeated '''Skill Point:''' Clear the map in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Werkbau gains the "Axion Buster" attack
*Gundam Heavyarms Kai (Trowa)
*Altron Gundam (Wufei)
*Dygenguar (Sanger)
*Huckebein Mk-III Trombe (Ratsel)
*R-GUN Powered (Viletta)

|'''Victory Condition:''' (1)(2) ZX-08 is defeated; (3) Varuch Ishar is defeated '''Defeat Condition:''' (1) Ally battleship is defeated, (2) Ally battleship is defeated, J is defeated; (3) Ally battleships is defeated, Selena, Viletta, Sanger, or Rastel are defeated '''Skill Point:''' Defeat ZX-02 in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*J-ARK (J, Tomoro)
*R-GUN Powered (Viletta)
*Dygenguar (Sanger)
*Huckebein Mk-III Trombe (Ratsel)
*Vegalion (Slay)

|-
| colspan="4" class="fc-std-sc" |'''第１３話：もう一度、自らの足で Scenario 13 - Once Again, On Your Feet'''

|-
| colspan="4" |'''Victory Condition:''' ZX-06 is defeated '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Clear the map in 6 turns; Defeat all other enemies before ZX-06 '''Secret Requirements:''' '''Unit Acquisition:'''
*Evangelion Unit 0 Custom (Rei)
*Evangelion Unit 1 (Shinji)
*Evangelion Unit 2 (Asuka)

|-
| colspan="4" class="fc-std-sc" |'''第１４話：オペレーション・ハルパー Scenario 14 - Operation Harper'''

|-
| colspan="4" |'''Victory Condition:''' Reduce Hermoz Ehad's HP to below 120000HP (E) / 90000HP (N) / 80000HP (H) '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Achieve the victory condition in 7 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*HyoRyu (HyoRyu)
*EnRyu (EnRyu)

|-
| colspan="4" class="fc-std-sc" |'''第１５話：遥かなる凱歌 Scenario 15 - A Faroff Victory Song'''

|-
| colspan="4" |'''Victory Condition:''' Defeat the Combine Primeval '''Defeat Condition:''' Ally Battleship is defeated, J is defeated '''Skill Point:''' Defeat all enemies in 7 turns, leaving the combined Primeval for last '''Secret Requirements:''' '''Unit Acquisition:'''
*J-Ark (J, Tomoro)
*ALL units are unavailable until clearing Scenario 18

|-
| colspan="4" class="fc-std-sc" |'''第１６話：導かれる魂、銀河で Scenario 16 - Souls Guided by the Galaxy'''

|-
| colspan="4" |'''Victory Condition:'''
*1st Part: Defeat all enemies
*2nd Part: Defeat all enemies
'''Defeat Condition:'''
*1st Part: Ideon is defeated
*2nd Part: Any ally is defeated
'''Skill Point:''' Defeat all enemies in 4 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Ideon (Cosmo, Kasha, Bess → Moera)
*VF-17S Nightmare (Kinryu)
*VF-17D Nightmare (Gamlin)
*VF-17D Nightmare (Docker)
*Battle 7 (Max, Exedore, Miho, Sally)
*Soloship (Bess)

|-
| colspan="4" class="fc-std-sc" |'''第１７話：ディスコード・ハーモニー Scenario 17 - Discord / Harmony'''

|-
| colspan="4" |'''Victory Condition:''' (1)(2) Defeat the Zig Mac; (3) Defeat FZ-109F Elgarthorn '''Defeat Condition:''' (1) Any ally is defeated; (2) Any ally is defeated, Zig Mac moves next to the Soloship (3) '''Skill Point:''' Meet victory the condition in 4 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Battle 7 can now transform into "Enhanced Attack Mode"
*VF-17D Nightmare (Docker)

|-
| colspan="4" class="fc-std-sc" |'''第１８話：銀河流浪 Scenario 18 - Galactic Wandering'''

|-
| colspan="4" |'''Victory Condition:'''
*1st Part: Defeat FZ-109F Elgarthorn
*2nd Part: Defeat Zig Mac
'''Defeat Condition:'''
*1st Part: Any ally is defeated
*2nd Part: Any ally is defeated
'''Skill Point:''' Meet victory conditions in 3 turns '''Secret Requirements:'''
*Duel Gundam
**Take the Earth Route
*VF-1J S Valkyrie
**Take the Earth Route
*LaGOWE
**Take the Earth Route
'''Unit Acquisition:'''
*VF-17D Nightmare (Physica)
*VF-17S (Kinryu), VF-17D (Gamlin), and VF-17D (Physica) gain the "Diamond Force Attack" combination Attack
*Ideon gains the "Omnidirectional Missile" attack
*All Ideon and Macross 7 units are lost <ul><li>Ideon (Cosmo, Kasha, Moera)</li><li>Soloship (Bess)</li><li>Battle 7 (Max, Exedore, Miho, Sally)</li><li>VF-17S Nightmare (Kinryu)</li><li>VF-17D Nightmare (Physica)</li><li>VF-17D Nightmare (Gamlin)</li>

|}
 

==Stages 19 - 33==
{| width="100%"
|- class="fc-route-h"
| width="50%" |'''Descend to Earth''' Gundam 0083 Gundam Z ZZ Gundam Char's CounterAttack Gundam Wing Gundam SEED Macross 7 Macross Plus Evangelion
| width="50%" |'''Mount a Lunar offensive''' GaoGaiGar Ideon Mazinger (Z, Great) Getter Robo Steel Jeeg Combattler V Gaiking Raideen Dancouga GoShogun

|-
| class="fc-route1" |'''第１９話：宇宙に降る星 Scenario 19 - Stars Falling in Space'''
| class="fc-route3" |'''第１９話：悪夢への招待状 Scenario 19 - A Written Invitation to a Nightmare'''

|-
|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated, Kira is defeated '''Skill Point:''' Destroy all enemies in 6 turns '''Secret Requirements:'''
*Duel Gundam
**Destroy Yzak.
'''Unit Acquisition:'''
*Nu Gundam (Amuro)
*Jegan (Katz)
*MP Nu Gundam (Kayra)
*Incom and Fin Funnel parts for MP Nu Gundam
*Kira unlocks the SEED pilot skill
*Skygrasper
*Ra Cailum (Bright, Torres)

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Destroy the Muge battleship in 6 turns (retreats at 6000HP (E) / 8000HP (N) / 10000 HP (H)) '''Secret Requirements:''' 
'''Unit Acquisition:'''
*Daiku Maryu (Pete, Midori)
*Gaiking (Sanshiro)
*Skylar (Fan Li)
*Bazolar (Yamagatake)
*Nesser (Bunta)

|-
| class="fc-route1" |'''第２０話：強襲、砂漠の虎 Scenario 20 - Assault of the Desert Tiger'''
| class="fc-route3" |'''第２０話：異邦人達の帰還 Scenario 20 - The Foreigners Return'''

|-
|'''Victory Condition:''' Defeat the Lesseps '''Defeat Condition:''' Ally battleship is defeated, Kira is defeated '''Skill Point:''' Defeat the Lesseps in 6 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Kira unlocks the SEED pilot skill
*Albion (Synapse, Paserov)
*Gundam Stamen (Kou)
*GM Cannon II (Keith)
*GM Custom (Burning)
*GM Custom (Bate)
*GM Custom (Monsha)
*GM Cannon II (Adel)
*Gundam GP01fb
*Armed Base Orchis parts for Gundam Stamen

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Destroy Helmut's Muge battleship in 4 turns (retreats at 6000HP (E) / 8000HP (N) / 10000 HP(H)) '''Secret Requirements:''' '''Unit Acquisition:'''
*Ideon (Cosmo, Kasha, Moera)
*Ideon gains the "Ideon Sword" and "Ideon Sword (MAP)" attacks
*Soloship (Bess, Hatari)

|-
| class="fc-route1" |'''第２１話：プリティ・デビル Scenario 21 - Pretty Devil'''
| class="fc-route3" |'''第２１話：裏切りの代償 Scenario 21 - The Cost of Betrayal'''

|-
|'''Victory Condition:'''
*1st Part: Gigil's ship is defeated
*2nd Part: Gigil's ship is defeated 
'''Defeat Condition:'''
*1st Part: Any ally is defeated
*2nd Part: Basara is defeated
'''Skill Point:''' Destroy Gigil before he moves adjacent to Sivil '''Secret Requirements:'''
*LaGOWE
**Waltfeld and Dacosta must both survive and get a combined total of 10 kills or more on the first half of the scenario.
*VF-1J
**Milia must get a total of 10 kills in the first half of the scenario.
'''Unit Acquisition:'''
*VF-17S Nightmare (Kinryu)
*VF-17D Nightmare (Gamlin)
*VF-17D Nightmare (Physica)
*VF-1J S Valkyrie (Milia)
*LaGOWE (Waldfelt)
*BuCUE (Dacosta)
*Skygrasper (Cagalli)
*VF-19 Kai Fire Valkyrie (Basara)
*VF-17S Nighmare (Milia)
*VF-1J S Valkyrie

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Any ally is defeated '''Skill Point:''' Destroy all enemies in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Goshogun (Shingo, Killy, Remi)
*Good Thunder (Sabranth)

|-
| class="fc-route1" |'''第２２話：砂塵の果て Scenario 22 - Beyond the Clouds of Sand'''
| class="fc-route3" |'''第２２話：発動する力、無限大 Scenario 22 - Infinite Activation Power'''

|-
|'''Victory Condition:''' (1) Defeat the Lesseps; (2) Waltfeld is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated '''Skill Point:''' Defeat the Lesseps in 5 turns '''Secret Requirements:'''
*LaGOWE
**Kira must destroy Waltfeld's LaGOWE while in SEED. (Kira has to activate SEED mode before the event that ends the stage.)
'''Unit Acquisition:'''
*Kira unlocks the SEED pilot skill

|'''Victory Condition:''' (1) Soloship reaches the computer facility; (2) Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Get the Soloship to the indicated area in 4 turns without it taking any damage '''Secret Requirements:''' '''Unit Acquisition:'''
*HyoRyu (HyoRyu)
*EnRyu (EnRyu)

|-
| class="fc-route1" |'''第２３話：エモーション・ハイ Scenario 23 - Emotion High'''
| class="fc-route3" |'''第２３話：決戦！地獄の月荒野 Scenario 23 - Decisive Battle in the Hellish Lunar Wilderness!'''

|-
|'''Victory Condition:''' (1) Defeat 2 Ghosts; (2) Defeat all enemies; (3) Basara sings to Sivil, All ZAFT forces are defeated '''Defeat Condition:''' (1) Ally battleship is defeated, Battle 7 is defeated; (2) Ally battleship is defeated, Battle 7 is defeated, Isamu or Guld are defeated; (3) Ally battleship is defeated, Isamu, Guld, or Basara are defeated '''Skill Point:''' Clear the map in 9 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*YF-19's "Full Volley" attacks gains +200 Attack power
*YF-19 and YF-21 gain the "Double Pinpoint Barrier Punch" combination attack
*Battle 7 (Max, Exedore, Miho, Sally)
*VF-19 Kai Fire Valkyrie (Basara)
*Mazinkaiser
*Shin Getter Robo

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Clear the map in 9 turns '''Secret Requirements:''' '''Unit Acquisition:'''

|-
| colspan="2" class="fc-std-sc" |'''第２４話：戦神の星で Scenario 24 - On the Planet of the War God'''

|-
| colspan="2" |'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' (1) Any ally is defeated; (2) Ally battleship is defeated '''Skill Point:''' Destroy all enemies in 3 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*VF-19 Kai Fire Valkyrie (Basara)
*VF-11 MAXL Kai (Mylene)
*VF-17 Kai Nightmare (Ray, Veffidas)
*Tallgeese III (Zechs)
*Taurus (Noin)
*Voltes V (Kenichi, Ippei, Daijiroh, Hiyoshi, Megumi)
*Daimos (Kazuya)
*Garuba FX-II (Kyoshiro, Nana)

|-
| colspan="2" class="fc-std-sc" |'''第２５話：選ばれし者、選びし者 Scenario 25 - Those Who Are Chosen, Those Who Choose'''

|-
| colspan="2" |'''Victory Condition:''' (1) Hermos is defeated; (2) Zifrud is defeated '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Clear the map in 8 turns '''Secret Requirements:''' '''Unit Acquisition:'''

|-
| colspan="2" class="fc-std-sc" |'''第２６話：かりそめの旅人 Scenario 26 - Transitory Traveler'''

|-
| colspan="2" |'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated, Temjin, Fei Yen, or Apharmd are defeated '''Skill Point:''' Destroy all enemies in 3 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Temjin 747J (Chief)
*Fei Yen the Knight (Fei)
*Apharmd The Hatter (The Hatter)

|-
| colspan="2" class="fc-std-sc" |'''第２７話：勇気ある者達の誓い Scenario 27 - The Oath of the Courageous'''

|-
| colspan="2" |'''Victory Condition:'''
*1st Part: Defeat all enemies
*2nd Part: (1) Defeat all enemies; (2) Defeat the Z-Master within (10 (E) / 7 (N) / 5 (H)) turns 
'''Defeat Condition:'''
*1st Part: Ally battleship is defeated, Gai is defeated
*2nd Part: (1) Ally battleship is defeated, Gai or J are defeated; (2) (10 (E) / 7 (N) / 5 (H)) turns have passed, Ally battleship is defeated, Gai or J are defeated 
'''Skill Point:''' Destroy all enemies in 7 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*J-Ark (J, Tomoro)

|-
| colspan="2" class="fc-std-sc" |'''第２８話：いつか星の海へ Scenario 28 - Someday, In the Sea of Stars'''

|-
| colspan="2" |'''Victory Condition:''' (1)(2) Defeat the Zonder Robo; (3) Defeat the Zonder Robo within 6 attacks from Star GaoGaiGar; (4)(5) Defeat all enemies '''Defeat Condition:''' (1) Galeon is defeated; (2) Ally battleship is defeated, Galeon is defeated; (3) Ally battleship or Gai are defeated, Zonder Robo is not defeated within 6 attacks from Star GaoGaiGar (4) Main Character is defeated; (5) Ally battleship is defeated '''Skill Point:''' Destroy the Zonuder Robo in 5 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Galeon (Galeon)
*Star GaoGaiGar/GaoGaiGar (Gai)
*YF-19 (Isamu)
*YF-21 (Guld)
*Battle 7 (Max)
*VF-17S Nightmare (Milia)
*VF-17D Nightmare (Gamlin)
*VF-17D Nightmare (Physica)
*VF-19 Kai Fire Valkyrie (Basara)
*VF-11 MAXL Kai (Mylene)
*VF-17 Kai Nightmare (Ray, Veffidas)
*HyoRyu (HyoRyu)
*EnRyu (EnRyu)
*Goldymarg (Goldymarg)
*Volfogg (Volfogg)
*Mic Sounders XIII (Mic Sounder XIII)
*Ideon (Cosmo, Kasha, Moera)
*Soloship (Bess, Hatari)
*Star GaoGaiGar (Guy, Choryujin, Goldymarg, Mic, Volfogg)
*Dygenguar (Sanger)
*Aussenseiter (Ratsel)
*R-Blade Custom (Ryusei)
*R-Gun Powered (Viletta)

|-
| colspan="2" class="fc-std-sc" |'''第２９話：押された烙印 Scenario 29 - Branded with the Mark'''

|-
| colspan="2" |'''Victory Condition:''' (1)(2) Defeat all enemies '''Defeat Condition:''' (1) Ally battleship is defeated; (2) Ally battleship is defeated, Cagalli is defeated '''Skill Point:''' Destroy all enemies in 6 turns '''Secret Requirements:'''
*Destroid Monster
**Take the Space Route
*FBz-99G
**Take the Space Route
*Strike Rouge IWSP
**Cagalli must have 30 or more kills by the end of this stage.
***Take the Alaska Route
*Duel Gundam
**Take the Alaska Route
'''Unit Acquisition:'''
*GaoFighGar (Guy)
*HyoRyu (HyoRyu)
*EnRyu (EnRyu)
*Goldymarg (Goldymarg)
*Volfogg (Volfogg)/Big Volfogg (Big Volfogg)
*Mic Sounders XIII (Mic Sounders XIII)
*AnRyu (AnRyu)
*KouRyu (KouRyu)
*Ra Cailum (Bright, Torres)

|- class="fc-route-h"
|'''Head to Alaska''' Gundam (0083, Z, ZZ, CCA, Wing, SEED) Daitarn 3 Mazinger (Z, Great) Steel Jeeg Voltes V Daimos Dancouga Evangelion
|'''Go to Space''' GaoGaiGar Ideon Getter Robo Combattler V GaiKing Raideen Goshogun Macross (DYRL, 7, Plus) Virtual On

|-
| class="fc-route2" |'''第３０話：終わらない閃光 Scenario 30 - Unending Flashes of Light'''
| class="fc-route4" |'''第３０話：ロスト・ディーヴァ Scenario 30 - Lost Diva'''

|-
|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated, Kira is defeated '''Skill Point:''' Clear the map in 7 turns '''Secret Requirements:'''
*Strike Rouge IWSP
**Mwu must defeat Dearka
**After the event, Kira must defeat Athrun while both are in SEED.
'''Unit Acquisition:'''
*Skygrasper (Cagalli)
*Strike Gundam (Kira)
*Kira unlocks the SEED pilot skill
*Cagalli unlocks the SEED pilot skill (needs verification)
*Archangel loses Natarle as a subpilot

|'''Victory Condition:''' (1)(2) Defeat all enemies '''Defeat Condition:''' (1) Any ally is defeated: (2) Ally battleship is defeated, Fire Bomber, Diamond Force, or Skull Squadron are defeated '''Skill Point:''' In 6 turns, destroy Glavil and Gavil. You must destroy Glavil before Gavil '''Secret Requirements:'''
*Gavil and FBz-99G Zaubergeran
**Gamlin must defeat Gavil
'''Unit Acquisition:'''
*YF-19 (Isamu) (Before Deploying)
*YF-21 (Guld) (Before Deploying)
*VF-1S S Valkyrie (Focker)
*VF-1S S Valkyrie (Hikaru)
*VF-1A S Valkyrie (Kakizaki)
*VF-17D Nightmare (Gamlin)
*VF-17D Nightmare (Physica)
*VF-19 Kai Fire Valkyrie (Basara)
*VF-11 MAXL Kai (Mylene)
*VF-17 Kai Nightmare (Ray, Veffidas)

|-
| class="fc-route2" |'''第３１話：青き清浄なる世界のために Scenario 31 - For Our Blue & Pure World'''
| class="fc-route4" |'''第３１話：禁断の惑星へ Scenario 31 - To the Forbidden Planet'''

|-
|'''Victory Condition:''' (1) Defeat all enemies; (2)(3) Defeat all Mobile Dolls, All ZAFT Units retreat '''Defeat Condition:''' (1)(2) Ally battleship is defeated, Heero is defeated; (3) Ally battleship is defeated '''Skill Point:''' Do not let a single ZAFT machine get shot down '''Secret Requirements:'''
*Duel Gundam
**Yzak must survive the scenario.
'''Unit Acquisition:'''
*Archangel gains Newman as a subpilot
*Freedom Gundam (Kira)
*Daitarn 3 (Banjo)
*Black Wing (Alan)

|'''Victory Condition:'''
*1st Part: Defeat all enemies
*2nd Part: Defeat Gepelnitch
'''Defeat Condition:'''
*1st Part: Any ally is defeated
*2nd Part: Ally battleship is defeated, Basara or Gamlin are defeated
'''Skill Point:''' In 7 turns, destroy Glavil and Gavil and make Gepelnitch's ship retreat (at 50,000 HP) '''Secret Requirements:'''
*Destroid Monster
**Get the Skill Point on this stage.
*Gavil and FBz-99G Zaubergeran
**Gamlin must defeat Gavil 
'''Unit Acquisition:'''
*Destroid Monster

|-
| class="fc-route2" |'''第３２話：守護神の巫女 Scenario 32 - Priestess of the Guardian God'''
| class="fc-route4" |'''第３２話：インフィニティ・ソウル Scenario 32 - Infinity Soul'''

|-
|'''Victory Condition:''' (1)(2) Defeat all enemies '''Defeat Condition:''' Any Ally is defeated; Ally battleship is defeated, Sanger or Rastel are defeated '''Skill Point:''' In 5 turns, destroy the General of Hell or Flora. '''Secret Requirements:''' '''Unit Acquisition:'''
*Dygenguar (Sanger)
*Assenseiter (Ratsel)

|'''Victory Condition:''' (1) Valgo is defeated; (2)(3) Defeat all enemies '''Defeat Condition:''' (1) Mylene, Ray, or Gamlin are defeated; (2) Basara, Mylene, Ray, or Gamlin are defeated; (3) Ideon is defeated '''Skill Point:''' In 6 turns, destroy Valgo '''Secret Requirements:'''
*Gavil and FBz-99G Zaubergeran
**Gamlin must defeat Gavil 
'''Unit Acquisition:'''
*VF-17D Nightmare → VF-17S Nightmare (Gamlin)
*VF-17D Nightmare (Docker)
**VF-17S (Gamlin), VF-17D (Physica) and VF-17D (Docker) gain the "Diamond Force Attack" combination attack
*VF-19 Kai Fire Valkyrie, VF-11 MAXL Kai, and VF-17 Kai Nightmare gain the "Sound Booster" mech ability
**All VF-19 Kai Fire Valkyrie SB Songs gain (MAP) and (ALL) combination attack variants when Sound Booster activates.
**All VF-11 MAXL Kai SB Songs gain (MAP) and (ALL) combination attack variants when Sound Booster activates.
*Ideon (Cosmo, Kasha, Moera)
** Ideon gains the "Ideon Sword" and "Ideon Sword (MAP)" attacks when IDE gauge is full, and HP is below 30%
*Soloship (Bess, Hatari)

|-
| class="fc-route2" |'''第３３話：暁への脱出 Scenario 33 - Escape to Daybreak'''
| class="fc-route4" |'''第３３話：受け継ぎし遺産 Scenario 33 - The Successor's Inheritance'''

|-
|'''Victory Condition:''' (1)(2) Defeat all enemies besides the Albion '''Defeat Condition:''' (1) Ally battleship is defeated, Kira, Shinobu, or Alan are defeated, Albion is defeated; (2) Kira, Shinobu, Alan, Mwu, or Cagalli are defeated '''Skill Point:''' In 8 turns, destroy all enemies except the Albion '''Secret Requirements:''' '''Unit Acquisition:'''
*Strike Gundam (Mwu)
*Strike Rouge (Cagailli)
*M1 Astray (Juri)
*M1 Astray (Mayura)
*M1 Astray (Asagi)
*Justice Gundam (Athrun)
*Buster Gundam (Dearka)
*Mazinger Z gains the "Giant Swing Rocket Punch" attack
*Great Mazinger gains the "Great Booster" attack
*Koutetsu Jeeg stats are enhanced and can transform into Jeeg Panzeroid
*Dancouga and Black Wing can combine into Final Dancouga.

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated, Akira or Jinguji are defeated '''Skill Point:''' In 8 turns, destroy Etzira, Valgo, Glavil, Gabro Zan, and Gije '''Secret Requirements:''' '''Unit Acquisition:'''
*VF-1A S Valkyrie (Kakizaki)
*Raideen gains the Mutron Open mech ability
*Ideon (Cosmo, Kasha, Moera)
*Soloship (Bess, Hatari)
*Battle 7 (Max, Exedore, Miho, Sally)
*VF-1S S Valkyrie (Fokker)
*VF-1S S Valkyrie (Hikaru)
*VF-1A S Valkyrie (Kakizaki)
*YF-19 (Isamu)
*YF-21 (Guld)
*VF-19 Kai Fire Valkyrie (Basara)
*VF-11 MAXL Kai (Mylene)
*VF-17 Kai Nightmare (Ray, Veffidas)
*VF-17S Nightmare (Gamlin)
*VF-17D Nightmare (Physica)
*VF-17D Nightmare (Docker)

|}
 

==Stages 34 - 44==
{| width="100%"
|- class="fc-route-h"
| width="25%" |'''Touma Route'''
| width="25%" |'''Kusuha Route'''
| width="25%" |'''Cobray Route'''
| width="25%" |'''Selena Route'''

|-
| class="fc-route1" |'''第３４話：武人の心、その意味 Scenario 34 - Why a Warrior Fights'''
| class="fc-route2" |'''第３４話：怒りの強念者 Scenario 34 - The Wrath of a Esper'''
| class="fc-route3" |'''第３４話：虚ろな魂の捕囚 Scenario 34 - Captivity of the Hollow Soul'''
| class="fc-route4" |'''第３４話：ベトレイヤー Scenario 34 - Betrayer'''

|-
|'''Victory Condition:'''
*1st Part: (1)(2) Defeat all enemies
*2nd Part: Bemidoban is defeated 
'''Defeat Condition:'''
*1st Part: (1) Ally battleship is defeated; (2) Ally battleship is defeated, Touma is defeated
*2nd Part: Touma is defeated
'''Skill Point:''' Defeat all enemies within 6 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Raioh (Touma)
*Mazinger Z, Great Mazinger and Getter Dragon gain the "F Dynamic Special" combination attack

|'''Victory Condition:'''(1)(2) Shin RyuOhKi is defeated; (3)(4) Bemidoban and Shmuel are defeated '''Defeat Condition:''' (1) Any ally is defeated; (2) Kusuha is defeated; (3) Kusuha is defeated, Ally battleship is defeated; (4) Ally battleship is defeated '''Skill Point:''' Destroy the Bemidoban (retreats (8000 (E) / 10000 (N) / 12000 (H)) HP) '''Secret Requirements:''' '''Unit Acquisition:'''
*Mazinger Z, Great Mazinger and Getter Dragon gain the "F Dynamic Special" combination attack
*Dygenguar (Sanger)
*Aussenseiter (Ratsel)

|'''Victory Condition:''' Shin RyuOhKi is defeated '''Defeat Condition:''' Ally battleship is defeated, Cobray, Arad, or Seolla are defeated '''Skill Point:''' Defeat Shin RyuOuKi within 6 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Werkbau (Cobray)
*Mazinger Z, Great Mazinger and Getter Dragon gain the "F Dynamic Special" combination attack

|'''Victory Condition:''' (1) Shmuel is defeated; (2)(3) Bemidoban defeated Shin RyuOhKi '''Defeat Condition:''' (1) Selena is defeated; (2) Ally battleship is defeated, Selena is defeated; (3) Ally battleship is defeated '''Skill Point:''' Bemidoban and Shin RyuOuKi shot down. Both flee when below (8000 (E) / 10000 (N) / 12000 (H)) HP. '''Secret Requirements:''' '''Unit Acquisition:'''
*Mazinger Z, Great Mazinger and Getter Dragon gain the "F Dynamic Special" combination attack
*Alterion (CF) (Ibis, Tsugumi)
*AS Soleares (Selena, Elma) is unavailable during the intermission

|-
| class="fc-route1" |'''第３５話：闘志、誰がために Scenario 35 - For Whom the Fighting Spirit Burns'''
| class="fc-route2" |'''第３５話：魂、久遠に Scenario 35 - The Soul, Into Eternity'''
| class="fc-route3" |'''第３５話：THE GUN OF DIS Scenario 35 - THE GUN OF DIS'''
| class="fc-route4" |'''第３５話：クロージング・ハート Scenario 35 - Closing Heart'''

|-
|'''Victory Condition:''' (1)(2) Defeat all enemies '''Defeat Condition:''' (1) Touma is defeated; (2) Ally battleship is defeated, Touma, Sanger, or Rastel are defeated '''Skill Point:''' Defeat all enemies within 4 turns of allied reinforcements arriving. '''Secret Requirements:''' '''Unit Acquisition:'''
*DaiRaioh(Touma)
*Dygenguar (Sanger)
*Aussenseiter (Ratsel)

|'''Victory Condition:''' (1)(2)(3) Shin RyuOhKi is defeated '''Defeat Condition:''' (1) Kusuha or Bullet are defeated; (2) Kusuha is defeated; (3) Ally battleship is defeated, Kusuha is defeated '''Skill Point:''' Destroy Shin RyuOhKi within 6 turns of Varuch Ben and Ishar's arrival, destroying them first. '''Secret Requirements:''' '''Unit Acquisition:'''
*GouRyu Kai (Kusuha)
*Raiko Kai (Bullet)
*Shin RyuKoOh (Kusuha, Bullet)
*Dygenguar (Sanger)
*Aussenseiter (Ratsel)

|'''Victory Condition:''' (1)(2) Bemidoban or Shmuel are defeated; (3) ??? is defeated; (4) Valk Baal is defeated '''Defeat Condition:''' (1) Cobray is defeated, (2)(3)(4) Ally battleship is defeated, Cobray is defeated '''Skill Point:''' Defeat the Bemidoban within 5 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Varuch Ben (Cobray)
*Dis Astranagant (Cobray)

|'''Victory Condition:''' (1)(2) Defeat all enemies '''Defeat Condition:''' (1) Selena is defeated; (2) Ally battleship is defeated '''Skill Point:''' Map cleared within 7 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Eslim (Selena)
*Alterion (CF) replaces Tsugumi with Slay as a Subpilot

|-
| colspan="4" class="fc-std-sc" |'''第３６話：激突！勇者VS勇者！ Scenario 36 - Clash! Brave vs. Brave!'''

|-
| colspan="4" |'''Victory Condition:'''
*1st Part: Defeat all enemies
*2nd Part: Ally battleship is defeated
'''Defeat Condition:'''
*1st Part: Star GaoGaiGar is defeated
*2nd Part: Gai is defeated
'''Skill Point:''' Defeat all enemies within 6 turns. '''Secret Requirements:'''
*EVA-01 F-Type Equipment
**Shinji must defeat Ramiel on the first part of this scenario.
*Early Nu Gundam HWS
**Amuro must have 60 or more kills by the end of the scenario.
*GP-02A
**Burning, Monsha, Bate, and Adel must have a combined killcount of 100 or more by the end of the scenario.
*Nuclear Bazooka
**Meet the requirements for GP-02A
*Black Getter
**Michiru must have 20 kills or more by the end of the scenario.
'''Unit Acquisition:'''
*Gundam GP02
*Megarider
*Re-GZ BWS
*MP Nu Gundam
*Black Getter
*VF-1S S Valkyrie (Fokker)
*VF-1S S Valkyrie (Hikaru)
*VF-1A S Valkyrie (Kakizaki)
*VF-1J S Valkyrie
*YF-19 (Isamu)
*YF-21 (Guld)
*Battle 7 (Max)
*VF-19 Kai Fire Valkyrie (Basara)
*VF-11 MAXL Kai (Mylene)
*VF-17 Kai Nightmare (Ray)
*VF-17S Nightmare (Gamlin)
*VF-17D Nightmare (Physica)
*VF-17D Nightmare (Docker
*Soloship (Bess, Hatari)
*Ideon (Cosmo, Kasha, Moera)

|-
| colspan="4" class="fc-std-sc" |'''第３７話：果て無き旅路の始まり Scenario 37 - The Beginning of an Unending Journey'''

|-
| colspan="4" |'''Victory Condition:''' (1) Defeat all enemies; (2)(3) Devariim is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated; (3) Ally battleship is defeated, Bundle, Cutnall, or Kernagul are defeated
'''Skill Point:''' All enemies destroyed within 6 turns, with Devariim being last. '''Secret Requirements:''' '''Unit Acquisition:'''
*Heavy Weapons System parts for Nu Gundam
*Evangelion Unit 0 Custom gains the "N2 Mine" MAP attack
*Evangelion Unit 1 gains the "Magoroku E Sword" attack
*Gunbuster (Noriko)
*Sizzler Black (Jung)
*Eltrium (Tashiro, Deputy Chief)
*Bundle Ship (Bundle)
*Cutnall Ship (Cutnall)
*Kernagul Ship (Kernagul)

|- class="fc-route-h"
| colspan="2" |'''Go with the Soloship''' Gundam (0083, Zeta, ZZ, CCA, Wing, SEED) Getter Robo Raideen Daitarn 3 Evangelion Ideon GaoGaiGar
| colspan="2" |'''Go with the Battle 7''' Mazinger (Z, Great) Macross (DYRL, 7, Plus) Steel Jeeg Combattler V Voltes V Gunbuster Daimos Gaiking Goshogun Dancouga Virtual On

|-
| colspan="2" class="fc-route1" |'''第３８話：運命の炎の中で Scenario 38 - Within the Fires of Destiny'''
| colspan="2" class="fc-route3" |'''第３８話：戦火は星の瞬きと Scenario 38 - The Fires of War Among the Twinkling Stars'''

|-
| colspan="2" |'''Victory Condition:'''
*1st Part: Enemy Battleship is defeated
*2nd Part: (1) Defeat all enemies; (2) Dalam's Ship is defeated
'''Defeat Condition:'''
*1st Part: Ally battleship is defeated, Ideon is defeated
*2nd Part: (1) Ally battleship is defeated; (2) Ally battleship is defeated, Cosmo is defeated
'''Skill Point:''' Clear the map within 7 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Ideon loses Moera as a subpilot
*Ideon gains the "Ideon Gun" attack

| colspan="2" |'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Defeat all enemies within 6 turns. '''Secret Requirements:''' '''Unit Acquisition:'''

|-
| colspan="2" class="fc-route1" |'''第３９話：果てに待つもの Scenario 39 - What Awaits at the End'''
| colspan="2" class="fc-route3" |'''第３９話：ただ母星のために Scenario 39 - All for the Motherworld'''

|-
| colspan="2" |'''Victory Condition:''' (1)(2)Gabro Zan is defeated '''Defeat Condition:''' (1) Ally battleship is defeated, Ryouma, Hayato, Benkei, or Michiru are defeated; (2) Ally battleship is defeated, Ryouma, Hayato, Benkei, or Cosmo are defeated '''Skill Point:''' Destroy all Buff Clan ships within 8 turns, saving Gabro Zan for last. '''Secret Requirements:''' '''Unit Acquisition:'''
* Ideon gains Gije as a subpilot
* Shin Getter-1 gains the "Shin Shine Spark" attack

| colspan="2" |'''Victory Condition:''' Heinel is defeated '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Within 7 turns, defeat all enemies, then defeat Heinel and Richter (Richter must be defeated before Heinel) '''Secret Requirements:''' '''Unit Acquisition:'''

*Goshogun gains the "GoFlasher Special" attack

|-
| colspan="2" class="fc-route1" |'''第４０話：勇者王、最後の刻！ Scenario 40 - The King of Brave’s Final Hour!'''
| colspan="2" class="fc-route3" |'''第４０話：勇気、果つる時… Scenario 40 - When Courage Fails...'''

|-
| colspan="2" |'''Victory Condition:'''
*1st Part: Defeat all enemies
*2nd Part: Ally battleship is defeated
'''Defeat Condition:'''
*1st Part: Defeat all enemies
*2nd Part: Gai is defeated
'''Skill Point:''' Defeat all enemies within 6 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*All GaoGaiGar units are lost

| colspan="2" |'''Victory Condition:''' (1)(2)(3) Defeat all enemies '''Defeat Condition:''' (1) Gai is defeated; (2) Ally battleship is defeated, Gai is defeated; (3) Ally battleship is defeated '''Skill Point:''' Defeat all enemies within 7 turns, with Palparepa Plus being the last one. '''Secret Requirements:''' '''Unit Acquisition:'''
*GaoFighGar (Gai)
*All GaoGaiGar units are lost

|-
| colspan="4" class="fc-std-sc" |'''第４１話：銀河が消滅する日 Scenario 41 - The Day the Galaxy is Extinguished'''

|-
| colspan="4" |'''Victory Condition:''' (1) Defeat all enemies; (2) GaoFighGar is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated, J is defeated '''Skill Point:''' GaoFighGar shot down by turn 7. '''Secret Requirements:'''
*Gije & Ganga Rube
**When given the option, choose to meet the opponent's challenge (first option).
'''Unit Acquisition:'''
*J-Ark (J)
|-
| colspan="4" class="fc-std-sc" |'''第４２話：超勇者黙示録 Scenario 42 - The Super Brave Apocalypse'''

|-
| colspan="4" |'''Victory Condition:'''
*1st Part: Defeat all enemies
*2nd Part: Genesis GaoGaiGar reaches the designated point in 4 turns
'''Defeat Condition:'''
*1st Part: Gai or J are defeated
*2nd Part: Ally battleship is defeated, Gai is defeated, 5th turn is reached
'''Skill Point:''' All enemies shot down by turn 7. '''Secret Requirements:'''
* J-Phoenix & Renais (Sub Pilot)
**Have J defeat Pia Decem on the first part of the stage. Defeat Pia Decem again to gain the attack.
'''Unit Acquisition:'''
* King J-der gains the "J-Phoenix" attack, and gains Renais as a sub-pilot
**Koryuu and Anryuu lose the "Renais Support Attack" attacks
*Genesic GaoGaiGar (Gai)
*Goldymarg (Goldymarg)
*Big Volfogg (Volfogg)
*TenRyuJin (TenRyuJin)
*KoRyu (KoRyu)
*AnRyu (AnRyu)
*EnRyu (EnRyu)
*HyoRyu (HyoRyu)
*Mic Sounder XIII (Mic Sounder XIII)

|- class="fc-route-h"
|'''Touma Route'''
|'''Kusuha Route'''
|'''Cobray Route'''
|'''Selena Route'''

|-
| class="fc-route1" |'''第４３話：閉ざされた世界で Scenario 43 - In a Closed-Off World'''
| class="fc-route2" |'''第４３話：真の龍神 Scenario 43 - The True Dragon God'''
| class="fc-route3" |'''第４３話：人形たちの宴 Scenario 43 - The Doll’s Banquet'''
| class="fc-route4" |'''第４３話：サイレント・クライ Scenario 43 - Silent Cry'''

|-
|'''Victory Condition:'''
*1st Part: (1) Defeat all enemies; (2) Vaikran is defeated, Houle is defeated
*2nd Part: Baran is defeated
'''Defeat Condition:'''
*1st Part: (1) Ally battleship is defeated, Touma or Ryusei are defeated; (2) Ally battleship is defeated, Ryusei is defeated
*2nd Part: Touma is defeated
'''Skill Point:''' Defeat the Bemidoban within 5 turns. '''Secret Requirements:''' '''Unit Acquisition:'''

|'''Victory Condition:''' (1) Defeat Shin RyuOhKi; (2) Vaikran is defeated, Houle is defeated '''Defeat Condition:''' (1) Kusuha or Ryusei are defeated; (2) Ally battleship is defeated, Ryusei is defeated '''Skill Point:''' Defeat Shin RyuOhKi within 5 turns. '''Secret Requirements:''' '''Unit Acquisition:'''

|'''Victory Condition:'''
*1st Part: (1) Defeat all enemies; (2) Vaikran is defeated, Houle is defeated
*2nd Part: Valk Baal is defeated
'''Defeat Condition:'''
*1st Part: (1)(2) Ally battleship is defeated, Ryusei is defeated
*2nd Part: Cobray is defeated
'''Skill Point:''' Defeat the Bemidoban within 5 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Dis Astranagant (Cobray) is unavailable during the intermission

|'''Victory Condition:''' (1) Defeat all enemies; (2)(3) Vaikran is defeated, Houle is defeated'''Defeat Condition:''' (1)(2) Ally battleship is defeated, Selena, Ibis, or Ryusei are defeated (3) Ryusei is defeated'''Skill Point:''' Defeat the Bemidoban within 5 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*AS Alegrias (Selena, Elma?) Is unavailable until the next stage

|-
| class="fc-route1" |'''第４４話：闘志、未来のために Scenario 44 - Fighting Spirit, for the Future'''
| class="fc-route2" |'''第４４話：四神招魂、ここに Scenario 44 - The Four Gods Souls, Gather Here'''
| class="fc-route3" |'''第４４話：鋼の戦神 Scenario 44 - The Steel War God'''
| class="fc-route4" |'''第４４話：マイホーム・マイフレンズ Scenario 44 - My Home, My Friends'''

|-
|'''Victory Condition:'''
*1st Part: Vaikran is defeated
*2nd Part: (1)(2) Vaikran is defeated
'''Defeat Condition:'''
*1st Part: Ally battleship is defeated, Ryusei is defeated
*2nd Part: (1) Touma or Lyria are defeated; (2) Touma, Baran, or Lyria are defeated
'''Skill Point:''' Destroy the Vaikran within 5 turns. '''Secret Requirements:'''
*VF-19F Excaliburs
**Max must have a total of 60 or more kills by the end of the scenario, if you do not pick the Go to Varauta route.
*Gije & Ganga Rube
**You must pick the Go To Bozoan Route.
'''Unit Acquisition:'''
*Banpreios (Ryuusei, Rai, Mai)
*Dygenguar (Sanger)
*Aussenseiter (Ratsel)
*Shumel (Lyria)
*Bemidoban (Baran)

|'''Victory Condition:'''
*1st Part: Vaikran is defeated
*2nd Part: (1)(2) Vaikran is defeated
'''Defeat Condition:'''
*1st Part: Kusuha or Ryusei are defeated
*2nd Part: (1) Ally battleship is defeated, Kusuha is defeated; (2) Kusuha, Bullet, or Lyria are defeated
'''Skill Point:''' Destroy the Vaikran within 5 turns. '''Secret Requirements:'''
*VF-19F Excaliburs
**Max must have a total of 60 or more kills by the end of the scenario, if you do not pick the Go to Varauta route.
*Gije & Ganga Rube
**You must pick the Go To Bozoan Route.
'''Unit Acquisition:'''
*Banpreios (Ryuusei, Rai, Mai)
*Dygenguar (Sanger)
*Aussenseiter (Ratsel)
*Shumel (Lyria)
*Shin RyuKoOh can now transform into Shin KoRyuOh

|'''Victory Condition:'''
*1st Part: (1) Defeat all enemies; (2) Vaikran is defeated
*2nd Part: Defeat all enemies
'''Defeat Condition:'''
*1st Part: (1)(2) Ally battleship is defeated, Ryusei, Arad or Seola are defeated
*2nd Part: Ally battleship is defeated, Cobray or Lyria are defeated
'''Skill Point:''' Destroy the Vaikran within 3 turns of its arrival. '''Secret Requirements:'''
*VF-19F Excaliburs
**Max must have a total of 60 or more kills by the end of the scenario, if you do not pick the Go to Varauta route.
*Gije & Ganga Rube
**You must pick the Go To Bozoan Route.
'''Unit Acquisition:'''
*Dis Astranagant (Cobray)
*Banpreios (Ryuusei, Rai, Mai)
*Dygenguar (Sanger)
*Aussenseiter (Ratsel)
*Shumel (Lyria)

|'''Victory Condition:'''
*1st Part: (1) Valk Isher is defeated; (2) Vaikran is defeated
*2nd Part: (1)(2) Vaikran is defeated
'''Defeat Condition:'''
*1st Part: (1)(2) Ally battleship is defeated, Ryusei or Ibis are defeated
*2nd Part: (1) Ally battleship is defeated, Selena, Ibis, or Lyria are defeated; (2) Selena or Lyria are defeated
'''Skill Point:''' Destroy the Vaikran within 3 turns of its arrival. '''Secret Requirements:'''
*VF-19F Excaliburs
**Max must have a total of 60 or more kills by the end of the scenario, if you do not pick the Go to Varauta route.
*Gije & Ganga Rube
**You must pick the Go To Bozoan Route.
'''Unit Acquisition:'''
*Banpreios (Ryuusei, Rai, Mai)
*Dygenguar (Sanger)
*Aussenseiter (Ratsel)
*Shumel (Lyria)
*Alterion (CF) replaces Slay with Tsugumi as a subpilot
*Vegalion (Slay)
**Alterion (CF) and Vegalion can combine into Hyperion

|}
 

==Stages 45 - 48==
{| width="100%"
|- class="fc-route-h"
| colspan="2" |'''Go to Earth'''
| colspan="2" |'''Go to Space'''

|- class="fc-route-h"
| width="25%" |'''Search for Irui''' Mazinger (Z, Great) Getter Robo Kotetsu Jeeg Gaiking Dancouga
| width="25%" |'''Fight against ZAFT''' Gundam (0083, Z, ZZ, CCA) Gundam Wing Gundam SEED Evangelion
| width="25%" |'''Go to Varauta''' Macross (DYRL, 7, Plus) GoShogun Daitarn 3 Gunbuster
| width="25%" |'''Go to Boazan''' Ideon Combattler V Voltes V Daimos Raideen GaoGaiGar Virtual On

|-
| class="fc-route1" |'''第４５話：とらわれの心、叫ぶ時 Scenario 45 - When the Captive Heart Cries Out'''
| class="fc-route2" |'''第４５話：忍び寄る終焉 Scenario 45 - Creeping Death'''
| class="fc-route3" |'''第４５話：悪夢の突入作戦 Scenario 45 - Charging into a Nightmare'''
| class="fc-route4" |'''第４５話：もう一つの母星ボアザン Scenario 45 - Another Mother Planet - Boazan'''

|-
|'''Victory Condition:''' (1) Defeat all enemies: (2) Legion is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated '''Skill Point:''' Defeat all enemies within 7 turns '''Secret Requirements:'''
'''Unit Acquisition:'''

|'''Victory Condition:''' (1) Defeat all enemies; (2) All Angels are defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated, Shinji, Asuka, or Rei are defeated '''Skill Point:''' Defeat all enemies within 5 turns. '''Secret Requirements:'''
*Early Nu Gundam HWS
**If you did not receive it on Scenario 37, Amuro must have 60 or more kills by the end of the scenario.
*EVA-01 F-Type Equipment(optional)
**Shinji must defeat Armisael.
*Neue Ziel
**Kou must have 40 or more kills than Keith by the end of the scenario.
*Val Varo
**Keith must have 20 or more kills than Kou by the end of the scenario.
*Gerbera Tetra
**Kou and Keith's killcounts must be within 6 of one another by the end of the scenario.
*Quin Mantha
**The sum of Ple and Ple 2's killcounts must be a number ending in 5 at the end of the scenario.
*Haman's Qubeley
**The sum of Ple and Ple 2's killcounts must be a number ending in 0 at the end of the scenario.
*MP Qubeleys
**The sum of Ple and Ple 2's killcounts must be a number ending in 7 at the end of the scenario.
*Doven Wolf
**The sum of Beecha and Mondo's killcounts must be a number ending in 0 at the end of the scenario.
*Geymalk
**The sum of Beecha and Mondo's killcounts must be a number ending in 5 at the end of the scenario.
*Strike Rouge IWSP
**The sum of Cagalli, Julie, Mayura, and Asagi's killcounts must be 100 or more by the end of the scenario.
*Early Full Armor ZZ Gundam
**Judau, Mondo, Beecha, Elle, Roux, and Iino's combined killcounts must be greater than 115 by the end of this scenario.
'''Unit Acquisition:'''
*Neue Ziel OR Val Varo OR Gerbera Tetra
*Quin Mantha OR Haman's Qubeley OR Mass Production Qubeley (x2)
*Doven Wolf OR Geymalk
*Strike Rougue IWSP
*Heavy Weapon System for Nu Gundam
*Full Armor Parts for ZZ Gundam
*Evangelion Unit 2 gains the "A.T. Field" attack
*Evangelion Unit 0 Custom gains the "Lance of Longinus" attack

|'''Victory Condition:'''
*1st Part: All allies reach the designated point, aside Battle 7
*2nd Part: Any ally reaches the designated point
'''Defeat Condition:'''
*1st Part: Any ally is defeated
*2nd Part: Any ally is defeated
'''Skill Point:''' Defeat all enemies before moving a unit to the target area. '''Secret Requirements:'''
'''Unit Acquisition:'''
*The following all gain the "Large Anti-Ship Reaction Missile" attack
**VF-1S S Valkyrie (Focker), VF-1S S Valkyrie (Hikaru), VF-1A S Valkyrie (Kakizaki)
**VF-17S Nightmare (Gamlin), VF-17D Nightmare (Docker), VF-17D Nightmare (Physica)
**YF-19 (Isamu), YF-21 (Guld)

|'''Victory Condition:''' Zartan is defeated '''Defeat Condition:''' Any ally is defeated '''Skill Point:''' Destroy all other enemies before destroying Zaltan. '''Secret Requirements:'''
'''Unit Acquisition:'''
*Voltes V is unavailable during the intermission
*Daimos is unavailable during the intermission

|-
| class="fc-route1" |'''第４６話：さらば父よ、戦士達の旅立ち Scenario 46 - Farewell, Father! The Warriors Depart'''
| class="fc-route2" |'''第４６話：永遠を信じて Scenario 46 - Believe in Eternity'''
| class="fc-route3" |'''第４６話：野望の第４惑星 Scenario 46 - The Fourth Planet of Ambition'''
| class="fc-route4" |'''第４６話：崩れゆく邪悪の塔 Scenario 46 - The Collapsing Tower of Evil'''

|-
|'''Victory Condition:''' (1) Steel Jeeg persuades Flora; (2) Defeat Yamata no Orochi, Demonica, and the Dragon Ship; (3) '''Defeat Condition:''' (1) Flora is defeated, Ally battleship is defeated, Kouji, Tetsuya, or Steel Jeeg are defeated; (2) Yamata no Orochi reaches the designated point, Ally battleship is defeated, Kouji, Tetsuya or Steel Jeeg are defeated '''Skill Point:''' Destroy Ryuuma and the Grand Marshall of Hell within 8 turns. '''Secret Requirements:'''
*Minmei's Disc
**Move Boss's squad onto either 'Hut' tile on the beach, and you will pick up the item
'''Unit Acquisition:'''
*Mazinkaizer gains the "Kaizer Nova" attack and Flight (S Rank in Air)

|'''Victory Condition:''' (1)(2) Defeat all enemies; (3) The Dominion withdraws '''Defeat Condition:''' (1) Any ally is defeated; (2)(3) Ally battleship is defeated, Kira or Athrun are defeated '''Skill Point:''' Destroy the Dominion (retreats at (10000HP (E) / 15000HP (N)/20000HP (H)) '''Secret Requirements:''' '''Unit Acquisition:'''
*Eternal (Lacus, Andrew)
*BuCUE
*METEOR parts for Freedom Gundam
*METEOR parts for Justice Gundam
*LaGOWE

|'''Victory Condition:''' (1) Guide all enemies east past the designated line; (2) All allies reach the escape point '''Defeat Condition:''' (1) Any ally is defeated, Any enemy is defeated; (2) Any ally is defeated '''Skill Point:''' Clear the map by defeating all enemies within 8 turns of the victory condition change '''Secret Requirements:'''
*VF-19F Excaliburs
**Max must get 15 or more kills on this scenario.
'''Unit Acquisition:'''
*VF-22S Sturmvogel II (Max)
*FBz-99G Zaubergeran (Gamlin)
*VF-19 Kai Fire Valkyrie gains the song "TRY AGAIN"
**VF-19 Kai Fire Valkyrie, VF-11 MAXL Kai, and VF-17 Kai Nightmare gain the "TRY AGAIN" (MAP) and (ALL) combination attack

|'''Victory Condition:''' (1) None; (2) Warchimedes is defeated; (3) Janera is defeated '''Defeat Condition:''' (1) Any friendly unit is defeated, Voltes V or Daimos are defeated; (2)(3) Ally battleship is defeated, Hyouma, Ken'ichi, Kazuya, or Heinel are defeated '''Skill Point:''' Destroy all enemies and finish the stage within 10 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Combattler V, Voltes V, and Daimos gain the "Choudenji SeiKenZuki" combination attack

|-
| class="fc-route1" |'''第４７話：神になろうとした男 Scenario 47 - The Man Who Tried to Become a God'''
| class="fc-route2" |'''第４７話：ヒトの見た夢 Scenario 47 - The Dream People Saw'''
| class="fc-route3" |'''第４７話：大宇宙の意志 Scenario 47 - The Will of the Universe'''
| class="fc-route4" |'''第４７話：因果の海で Scenario 47 - In the Sea of Causality'''

|-
|'''Victory Condition:''' (1) Defeat all enemies; (2) Shapiro is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated '''Skill Point:''' Destroy Shapiro within 6 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Gaiking and Daiku Maryuu gain the "Giant Cutter Upside-down Slash" combination attack

|'''Victory Condition:''' (1)(2)(3) Defeat all enemies; '''Defeat Condition:''' (1) Ally battleship is defeated, Kira, Mwu, or Dearka are defeated; (2) Kira is defeated; (3) The Vesalius is defeated '''Skill Point:''' Orga, Clotho and Shani shot down before Fllay reaches the Dominion. '''Secret Requirements:''' '''Unit Acquisition:'''

|'''Victory Condition:''' (1)(2)(3) Defeat all enemies '''Defeat Condition:''' (1) Any ally is defeated; (2) Ally battleship is defeated, Bundle is defeated; (3) Ally battleship is defeated, Bundle, Gamlin, or Mylene are defeated '''Skill Point:''' Destroy all SMTC units within 5 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*VF-19S Excalibur (before deployment)
*VF-19F Excalibur (x2) (before deployment)
*Bundle's Ship (Bundle, Cutnal, Kernagul)

|'''Victory Condition:'''
*1st and 2nd Part: Defeat all enemies within (5 (E) / 4 (N) / 3 (H)) turns
*3rd and 4th Part: Defeat all enemies within (4 (E) / 3 (N) / 2 (H)) turns
*5th Part: Defeat all enemies within (8 (E) / 7 (N) / 6 (H)) turns
'''Defeat Condition:'''
*1st and 2nd Part: Ally battleship is defeated, Turn (6 (E) / 5 (N) / 4 (H)) is reached
*3rd and 4th Part: Ally battleship is defeated, Turn (5 (E) / 4 (N) / 3 (H)) is reached
*5th Part: Ally battleship is defeated, Turn (9 (E) / 8 (N) / 7 (H)) is reached
'''Skill Point:''' During the 5th Part: Shoot down the two Gataman Zans before the Gabro Zan '''Secret Requirements:''' '''Unit Acquisition:'''

|-
| colspan="2" class="fc-route1" |'''第４８話：失われた者たちへの鎮魂歌 Scenario 48 - Requiem for the Lost'''
| colspan="2" class="fc-route4" |'''第４８話：銀河に死す Scenario 48 - To Die in the Galaxy'''

|-
| colspan="2" |'''Victory Condition:''' (1) Deathgaia, Gildrome, and Helmut are defeated; (2) Mute Zalbados is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated '''Skill Point:''' Defeat all enemies within 6 turns after Muge Zalbados appears, then defeat Muge Zalbados '''Secret Requirements:'''
*Early Nu Gundam HWS
**If you did not receive it on Scenario 37 or 45, Amuro must have 60 or more kills by the end of the scenario.
'''Unit Acquisition:'''

| colspan="2" |'''Victory Condition:''' (1) Defeat all enemies; (2) Gollum or Zomd are defeated; (3) Defeat all enemies; (4) Gabro Zan is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated, Basara is defeated; (3)(4) Ally battleship is defeated, Ideon is defeated '''Skill Point:''' Destroy GaviGla (retreats at 8000HP (E) / 10000HP (N) / 12000HP (H)) '''Secret Requirements:'''
*Early Nu Gundam HWS
**If you did not receive it on Scenario 37 or 45, Amuro must have 60 or more kills by the end of the scenario.
*Gije & Ganga Rube
**The Ide Gauge must reach level 5 during this scenario.
'''Unit Acquisition:'''
*Ideon replaces Gije with Dek as a Subpilot
*Battle 7 gains the "Large Anti-Ship Reaction Missile" attack
*VF-19 Kai Fire Valkyrie (Basara) is unavailable during the intermission

|}
 

==Stages 49 - 58==
{| width="100%"
|-
| colspan="3" class="fc-std-sc" |'''第４９話：銀河に響く歌声 Scenario 49 - Songs Resounding Through the Galaxy'''

|-
| colspan="3" |'''Victory Condition:'''
*1st Part: Defeat all enemies, In 5 turns Battle 7 reaches the designated point
*2nd Part: (1) In 6 turns, Battle 7 reaches the designated point; (2)(3)(4) Gepelnitch is defeated
'''Defeat Condition:'''
*1st Part: Ally battleship is defeated, Battle 7 doesn't reach the designated point by turn 6
*2nd Part: (1) Ally battleship is defeated, Mylene or Ray are defeated, Battle 7 doesn't reach the designated point by turn 7; (2) Ally battleship is defeated, Ray is defeated; (3) Ally battleship is defeated, Basara, Mylene, or Ray are defeated; (4) Ally battleship is defeated, Basara, Mylene, Ray, or Sybil are defeated
'''Skill Point:''' GaviGla is defeated (in the 1st part) '''Secret Requirements:'''
*Gavil and FBz-99G Zaubergeran
**If Gamlin has over 50 kills, Gamlin must defeat GaviGla during the first half of the scenario. During the second half of the scenario, do not defeat Gavil.
'''Unit Acquisition:'''
*VF-22S Sturmvogel II (Max)
*VF-22S Sturmvogel II (Milia)
*Sybil (Sybil)
**VF-19 Kai Fire Valkyrie, VF-11 MAXL Kai, and VF-17 Kai Nightmare, and Sybil gain the "TRY AGAIN" combination attack
*FBz-99G Zaubergeran (Gavil)

|-
| colspan="3" class="fc-std-sc" |'''第５０話：二つの門と二つの星 Scenario 50 - Two Gates, Two Stars'''

|-
| colspan="3" |'''Victory Condition:''' (1) Hermodr Echad is defeated; (2) Zfield is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated '''Skill Point:''' Destroy the Hermodr Echad within 5 turns. '''Secret Requirements:'''
*Duel Gundam & Yzak
**Dearka's killcount must be 50 or more by the end of the scenario.
'''Unit Acquisition:'''

|-
| colspan="3" class="fc-std-sc" |'''第５１話：終わらない明日へ Scenario 51 - To an Unending Tomorrow'''

|-
| colspan="3" |'''Victory Condition:'''
*1st Part: (1) Destroy all nuclear missiles; (2) Dominion is defeated & Athrun reaches the designated point
*2nd Part: Destroy the Genesis reactor within 4 turns
'''Defeat Condition:'''
*1st Part: (1) Any missile reaches the end of the map, Ally battleship is defeated, Kira, Athrun or Cagalli are defeated; (2) Ally battleship is defeated, Kira, Athrun or Cagalli are defeated
*2nd Part: Kira is defeated, reach the 5th turn
'''Skill Point:''' Destroy the Providence Gundam (in the 2nd part) '''Secret Requirements:'''
*Duel Gundam & Yzak
**During the first half of the scenario, destroy all of the nukes, then have Dearka battle with Yzak
**Both must survive the first half of the scenario
'''Unit Acquisition:'''
*Lacus unlocks the SEED pilot skill
*Duel Gundam (Yzak)

|-
| colspan="3" class="fc-std-sc" |'''第５２話：世界の中心でアイを叫んだもの Scenario 52 - The One Who Cried "Love" at the Heart of the World'''

|-
| colspan="3" |'''Victory Condition:'''
*1st Part: (1)(2)(3) Defeat all enemies (4)(5) EVA Unit 1 is defeated
*2nd Part: EVA Unit 1 is defeated
'''Defeat Condition:'''
*1st Part: (1) Any ally is defeated; (2) Shinji is defeated; (3)(4) Ally battleship is defeated; (5) Ally battleship is defeated, Reach the 6th turn after the "Cross" grows from the Earth
*2nd Part: Shinji is defeated
'''Skill Point:''' Asuka survives for 2 full turns. '''Secret Requirements:'''
*Neue Ziel
**Kou must have 40 or more kills than Keith by the end of the scenario.
*Val Varo
**Keith must have 20 or more kills than Kou by the end of the scenario.
*Gerbera Tetra
**Kou and Keith's killcounts must be within 6 of one another by the end of the scenario.
*Quin Mantha
**The sum of Ple and Ple 2's killcounts must be a number ending in 5 at the end of the scenario.
*Haman's Qubeley
**The sum of Ple and Ple 2's killcounts must be a number ending in 0 at the end of the scenario.
*MP Qubeleys
**The sum of Ple and Ple 2's killcounts must be a number ending in 7 at the end of the scenario.
*Doven Wolf
**The sum of Beecha and Mondo's killcounts must be a number ending in 0 at the end of the scenario.
*Geymalk
**The sum of Beecha and Mondo's killcounts must be a number ending in 5 at the end of the scenario.
*EVA-01 F-Type Equipment
**Shinji must defeat Zeruel on the first part of this scenario.
**Shinji must defeat EVA-01 on the second part of this scenario.
**The sum of Shinji, Asuka, and Rei's killcounts must be 250 or more, or 150 or more if you met the requirement on scenario 45.
*Hi-Nu Gundam
**Amuro and Bright's combined killcounts must be greater than 120 by the end of this scenario.
*Sazabi
**Amuro and Kamille's killcount must be 50 or more each at the end of this scenario. You will receive it at the start of next scenario.
*Strike Rouge IWSP
**If you did not receive it on Scenario 45, the sum of Cagalli, Julie, Mayura, and Asagi's killcounts must be 100 or more by the end of the scenario.
*Destroid Monster
**If you did not receive it on Scenario 31, the sum of Fokker, Hikaru, and Kakizaki's killcounts must be 100 or more by the end of this scenario.
'''Unit Acquisition:'''
*Evangelion Unit 0 (Kaowru)
*Evangelion Unit 0 loses the "Lance of Longinus" attack

|-
| colspan="3" class="fc-prologue" |'''Beyond this point, losing Ideon results in a Game Over'''
|-
| colspan="3" class="fc-std-sc" |'''第５３話：出航！銀河殴り込み艦隊！ Scenario 53 - The Galactic Assault Fleet Takes Sail!'''

|-
| colspan="3" |'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' 230 enemy units shot down by turn 7. '''Secret Requirements:''' '''Unit Acquisition:'''
*All secret units and parts are given after the stage begins <ul><li>Neue Ziel OR Val Varo OR Gerbera Tetra</li><li>Quin Mantha OR Haman's Qubeley OR Mass Production Qubeley (x2)</li><li>Doven Wolf OR Geymalk</li><li>Strike Rougue IWSP</li><li>Hi-Nu Gundam</li><li>Sazabi</li><li>Destroid Monster</li><li>F-Type Equipment for Evangelion Unit 1</li><li>Atomic Bazooka parts for GP-02</li><li>Heavy Weapon System for Nu Gundam</li><li>Full Armor Parts for ZZ Gundam</li></ul>
*MP Nu Gundam
**Fin Funnel parts for MP Nu Gundam
*Gunbuster adds Kazumi as a Subpilot
**Gunbuster gains the "Super Inazuma Kick" attack
*Ra Cailum gains the "Nuclear Missile" MAP and ALL attacks

|-
| colspan="3" class="fc-std-sc" |'''第５４話：神に守られし星 Scenario 54 - The Planet Guarded by the Gods'''

|-
| colspan="3" |'''Victory Condition:'''
*1st Part: (1) Defeat all enemies; (2) The SRX Team rescues [https://akurasu.net/wiki/Super_Robot_Wars/Alpha_3/Info_Dump#Finding_Aya_on_Scenario_54 Aya]; (3) Jumora is defeated
*2nd Part: Bemidoban is defeated
'''Defeat Condition:'''
*1st Part: (1)(2) Ally battleship is defeated, Ryusei or Viletta are defeated; (3) Ally battleship is defeated, Ryusei, Viletta, Baran, or Lyria are defeated
*2nd Part: Sanger is defeated
**2nd Part (Touma Route): Touma is defeated
'''Skill Point:''' Clear the map within 10 turns, with both Hermoz defeated '''Secret Requirements:''' '''Unit Acquisition:'''
*Banpreios adds Aya as a Subpilot
**Branpreios gains the "Tenjou Tenge Nendou Musou-ken" attack
**Branpreios and R-GUN Powered gain the "Tenjou Tenge Ichigeki Hissatsu-ho" combination attack
*Shumel (Lyria)
*Bemidoban (Baran)

|-
| colspan="3" class="fc-std-sc" |'''第５５話：まつろわぬ神 Scenario 55 - The God Who Resists Order'''

|-
| colspan="3" |'''Victory Condition:'''
*1st Part: (1) Defeat all enemies; (2) Defeat Gebel GanEden
*2nd Part: (1) Defeat all enemies; (2) Defeat Gebel GanEden
'''Defeat Condition:'''
*1st Part: (1)(2) Ally battleship is defeated
*2nd Part: (1)(2) Ally battleship is defeated
'''Skill Point:''' Within 6 turns, defeat both Zfiruds '''Secret Requirements:''' '''Unit Acquisition:'''

|-
| colspan="3" class="fc-std-sc" |'''第５６話：終わりなき総力戦 Scenario 56 - Unending Total War'''

|-
| colspan="3" |'''Victory Condition:'''
*1st Part: Drowa Zan is defeated within 5 turns
*2nd Part: (1) Soloship move next to the Bairal Jinn; (2) Any unit reaches the designated point
'''Defeat Condition:'''
*1st Part: Ally battleship is defeated, 6th turn is reached
*2nd Part: (1)(2) Ally battleship is defeated
'''Skill Point:''' Clear the map within 7 turns. '''Secret Requirements:'''
*Gije & Ganga Rube
**You must pick the Fight The Buff Clan option at the end of the scenario.
*Bad Ending Route
**On New Game+, choose to fight (first option)
'''Unit Acquisition:'''

|- class="fc-route-h"
| width="40%" |'''Fight The Buff Clan''' Ideon, Getter Robo Combattler V, Voltes V, Daimos Daitarn 3 Gundam (0083, Zeta, ZZ, CCA, Wing, SEED)
| width="40%" |'''Fight The STMC''' Mazinger (Z, Great), Steel Jeeg, Raiden Goshogun, Dancouga, Gaiking Macross (DYRL, Plus, 7) Gunbuster, Evangelion, GaoGaiGar Virtual On
| width="20%" |'''Bad Ending '''

|-
| class="fc-route1" |'''第５７話：憎しみの環の中で Scenario 57 - In a Circle of Hatred'''
| class="fc-route3" |'''第５７話：終わりの始まり Scenario 57 - The Beginning of the End'''
| class="fc-prologue" |'''イデ発動ルート最終話：銀河に君と''' '''Ide Activation Final Scenario - With You In The Galaxy'''

|-
|'''Victory Condition:'''
*1st Part: (1) Defeat all enemies; (2) Soloship reaches the designated point
*2nd Part: Defeat all enemies within (11 (E) / 9 (N) / 7 (H)) turns
'''Defeat Condition:'''
*1st Part: (1)(2) All allies are defeated
*2nd Part: Turn (12 (E) / 10 (N) / 8 (H)) is reached, Ally battleship is defeated
'''Skill Point:''' Defeat all enemies within (10 (E) / 8 (N) / 6 (H)) turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Ganga Rube (Gije)

|'''Victory Condition:''' (1)(2) Defeat all enemies '''Defeat Condition:''' (1) Eltrium is defeated; (2) Ally battleship is defeated '''Skill Point:''' Defeat all enemies within 7 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Eltrium (Tashiro, Deputy Chief)

| rowspan="4" |'''Victory Condition:''' Bairal Jinn is defeated '''Defeat Condition:''' Ally battleship is defeated '''Secret Requirements:''' '''Unit Acquisition:'''

|-
| class="fc-route1" |'''第５８話：発動 Scenario 58 - Activation'''
| class="fc-route3" |'''第５８話：死闘、未来を懸けて Scenario 58 - The Mortal Struggle for the Future'''

|-
|'''Victory Condition:'''
*1st Part: Bairal Jinn is defeated
*2nd Part: Bairal Jinn is defeated
'''Defeat Condition:'''
*1st Part: Ally battleship is defeated
*2nd Part: Ally battleship is defeated
'''Skill Point:''' Destroy the Bairal Jinn within six turns. '''Secret Requirements:''' '''Unit Acquisition:'''

|'''Victory Condition:''' (1)(2) Defeat all enemies '''Defeat Condition:''' (1) Ally battleship is defeated; Drowa Zan is defeated, Ally battleship is defeated(2) '''Skill Point:''' All Buff Clan units survive the stage. '''Secret Requirements:''' '''Unit Acquisition:'''

|}
 

==Stages 59 - END==
{| width="100%"
|-
| colspan="2" class="fc-std-sc" |'''第５９話：果てしなき流れの果てに Scenario 59 - At the End of the Unending Flow'''

|-
| colspan="2" |'''Victory Condition:'''
*1st Part: Reach the 11th turn
*2nd Part: Defeat all enemies, 6th turn is reached
'''Defeat Condition:'''
*1st Part: Ally battleship is defeated, Any enemy enters the designated area
*2nd Part: Any enemy enters the designated area, Ally battleship is defeated, Noriko or Jung are defeated
'''Skill Point:''' Defeat all enemies within 5 turns. '''Secret Requirements:''' '''Unit Acquisition:'''

|- class="fc-route-h"
| width="50%" |'''Normal Ending - 56 Skill Points or less, OR turn count 421 or more'''
| width="50%" |'''Good Ending - 57 Skill Points or more AND turn count 420 or less'''

|-
| class="fc-route1" |'''最終話: 終焉の銀河 Final Scenario - A Galaxy of Death'''
| class="fc-route3" |'''最終話: 今遥か遠い彼方… Final Scenario - Now, The Faraway Yonder'''

|-
|'''Victory Condition:''' (1) ??? is destroyed; (2) Kaiser Ephres is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated '''Secret Requirements:''' '''Unit Acquisition:'''

|'''Victory Condition:''' (1) ??? is destroyed; (2)(3) Kaiser Ephres is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated; (3) Irui is defeated '''Secret Requirements:''' '''Unit Acquisition:'''
*Nashim Gan Eden (Irui)

|}

Super Robot Wars/Alpha 3/Flow Chart

2023-06-08T17:24:56Z

KomodoWork:

Units and Pilots in Black join your team. 
Units and Pilots in Orange are available for that stage, then leave. 
Units and Pilots in Blue have special requirements. Check the [[../Secrets|Secrets]] page for more details. 
Units and Pilots in Red previously joined, but from this point, are rendered unusable. Those lost permanently are marked so, while others rejoin later on. 
Information in Green are upgrades for units already in your party.

==Stages 01 - 18==
{| width="100%"
|- class="fc-route-h"
| width="25%" |'''Touma Route'''
| width="25%" |'''Kusuha Route'''
| width="25%" |'''Cobray Route'''
| width="25%" |'''Selena Route'''

|-
| class="fc-route1" |'''第１話：闘志、炎に燃ゆる Scenario 1 - Within the Flames, Fighting Spirit Rises'''
| class="fc-route2" |'''第１話：出撃！鋼の龍虎 Scenario 1 - Launch! Dragon and Tiger of Steel'''
| class="fc-route3" |'''第１話：虚空からの転生 Scenario 1 - Reincarnated from the Void'''
| class="fc-route4" |'''第１話：シークレット・ミッション Scenario 1 - Secret Mission'''

|-
|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Any allied unit is defeated '''Skill Point:''' Defeat all enemies in 3 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Raioh (Touma)
*GaoGaiGar (Guy)
*Goldymarg (Goldymarg)
*HyoRyu (HyoRyu)
*EnRyu (EnRyu)

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Any allied unit is defeated '''Skill Point:''' Defeat all enemies in 2 turns '''Secret Requirements:'''
*Bullet
**You must be playing as Kusuha to recruit Bullet.
'''Unit Acquisition:'''
*Gouryu Kai (Kusuha)
*Raikou Kai (Bullet)
*Mazinkaiser (Kouji)
*Diana A (Sayaka)
*Shin Getter (Ryoma, Hayato, Benkei)
*Lady Command (Michiru)

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' (1) Werkbau is defeated; (2) Werkbau is defeated, ally battleship is defeated '''Skill Point:''' Defeat all enemies in 5 turns after enemy reinforcements show up '''Secret Requirements:'''
*Arado and Seolla
**You must be playing as Cobray to recruit Arado and Seolla.
'''Unit Acquisition:'''
*Werkbau (Cobray)
*Nu Gundam (Amuro)
*Ra Cailum (Bright, Torres)
*MP Nu Gundam (Kayra)
*Jegan (Katz)
*Incom & Funnel parts for MP Nu Gundam

|'''Victory Condition:''' (1) All enemies except Salamis Kai shot down; (2) R-Gun Powered shot down '''Defeat Condition:''' (1) Selena shot down, Salamis Kai shot down; (2) Selena shot down '''Skill Point:''' Defeat all enemies except the Salamis Kai in 4 turns '''Secret Requirements:'''
*Ibis and Slay
**You must be playing as Selena to recruit Ibis and Slay.
'''Unit Acquisition:'''
*AS Soleares (Selena, Elma)
*Albion (Synapse, Paserov)
*GP03 Dendrobium (Kou)
*GM Cannon II (Keith)
*GM Custom (Burning)
*GM Custom (Bate)
*GM Custom (Monsha)
*GM Cannon II (Adel)
*Zeta Gundam (Kamille)
*Re-GZ BWS (Four)
*Methuss (Fa)
*Super Gundam (Emma)
*Armed Fortress Orchis parts for Gundam Stamen
*G Defensor parts for Gundam Mk-II

|-
| class="fc-route1" |'''第２話: さらばGGG、さらば勇者 Scenario 2 - Farewell, GGG! Farewell, Braves!'''
| class="fc-route2" |'''第２話: 新たなる侵略者！立ち上がれV Scenario 2 - New Invaders! Rise Up, V!'''
| class="fc-route3" |'''第２話: 血の狼煙 Scenario 2 - Beacon Fire of Blood'''
| class="fc-route4" |'''第２話: フラッシュ・デイ Scenario 2 - Flash Day'''

|-
|'''Victory Condition:''' Defeat all enemies; Defeat ZX-01 '''Defeat Condition:''' Any allied unit is defeated '''Skill Point:''' Defeat the 4 Zonders in 2 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*GaoGaiGar (Guy)
*J-Der (J, Tomoro)
*Great Mazinger (Tetsuya)
*Venus A (Jun)
*Boss Borot (Boss, Nuke, Mucha)
*Kotetsu Jeeg (Jeeg)
*Big Shooter (Miwa)

|'''Victory Condition:''' (1) Defeat all enemies, (2) Defeat Dangel '''Defeat Condition:''' (1) Hyouma defeated (2) Any Allied Unit is defeated '''Skill Point:''' Defeat all enemies in 3 turns, do not lose any Federation Army squads '''Secret Requirements:''' '''Unit Acquisition:'''
*Combattler V (Hyoma, Juzo, Daisaku, Chizuru, Kosuke)
*Jegan (Federation Soldier) x 3

|'''Victory Condition:''' (1) Defeat the Magellan Kai-class Battleship (2) Defeat the Magellan Kai-class Battleship and Nuclear Missiles '''Defeat Condition:''' (1) Any ally unit is defeated (2) Nuclear Missiles reach the marked area on the map '''Skill Point:''' Defeat the enemy missiles and battleship in 7 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Clop-class (Federation Captain)
*Wildfalken (Seolla)
*MP Nu Gundam (Cobray)
*ZZ Gundam (Judau)
*Re-GZ BWS (Roux)
*Albion (Synapse, Paserov)
*GP03 Dendrobium (Kou)
*GM Cannon II (Keith)
*GM Custom (Burning)
*GM Custom (Bate)
*GM Custom (Monsha)
*GM Cannon II (Adel)
*Zeta Gundam (Kamille)
*Re-GZ BWS (Four)
*Methuss (Fa)
*Super Gundam (Emma)
*Armed Fortress Orchis parts for Gundam Stamen
*G Defensor Parts for Gundam Mk-II

|'''Victory Condition:''' Defeat any enemy battleship '''Defeat Condition:''' (1) Allied battleship is defeated; (2) Allied battleship is defeated, Selena is defeated '''Skill Point:''' Defeat the enemy battleship in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*ZZ Gundam (Judau)
*Re-GZ BWS (Roux)
*Nu Gundam (Amuro)
*Ra Cailum (Bright)
*Jegan (Katz)
*MP Nu Gundam (Keyra)
*AS Soleares (Selena, Elma)
*Incom & Funnel parts for MP Nu Gundam

|-
| colspan="4" class="fc-std-sc" |'''第３話: 逆襲！機界31原種 Scenario 3 - Counterattack! The 31 Machine Primevals!'''

|-
| colspan="4" |'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' (1) Ally battleship is defeated, One of the Machine Primevals reaches the edge of the map; (2) Ally battleship is defeated, One of the Machine Primevals reaches the edge of the map, J is defeated '''Skill Point:''' Defeat all enemies in 6 turns '''Secret Requirements:''' '''Unit Acquisition (Touma & Kusuha):'''
*J-Ark (J, Tomoro)
*Nu Gundam (Amuro)
*Ra Cailum (Bright, Torres)
*Jegan (Katz)
*MP Nu Gundam (Keyra)
*Albion (Synapse, Paserov)
*GP03 Dendrobium (Kou)
*GM Cannon II (Keith)
*GM Custom (Burning)
*GM Custom (Bate)
*GM Custom (Monsha)
*GM Cannon II (Adel)
*Zeta Gundam (Kamille)
*Re-GZ BWS (Four)
*Methuss (Fa)
*Super Gundam (Emma)
*Incom & Funnel parts for MP Nu Gundam
*Armed Fortress Orchis parts for Gundam Stamen
*G Defensor Parts for Gundam Mk-II
'''Unit Acquisition (Cobray & Selena):'''
*J-Ark (J, Tomoro)
*Mazinkaiser (Kouji)
*Diana A (Sayaka)
*Great Mazinger (Tetsuya)
*Venus A (Jun)
*Combattler V (Hyoma, Juzo, Daisaku, Chizuru, Kosuke)
*Koutetsu Jeeg (Jeeg)
*Big Shooter (Miwa)
*Shin Getter (Ryoma, Hayato, Benkei)
*Lady Command (Michiru)

|-
| colspan="4" class="fc-std-sc" |'''第４話：地獄門、開く Scenario 4 - The Gates of Hell Open'''

|-
| colspan="4" |'''Victory Condition:'''
*1st Part: Allied Battleship reaches the escape point in 5 turns, All Enemies are defeated in 5 turns
*2nd Part: Defeat all enemies
'''Defeat Condition:'''
*1st Part: Allied Battleship is defeated, Turn 6 starts
*2nd Part: SRX is defeated
'''Skill Point:''' Defeat all enemies in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*SRX (Damaged) (Ryuusei, Rai, Aya)

|-
| colspan="4" class="fc-std-sc" |'''第５話: 地球圏絶対防御線 Scenario 5 - The Earth Sphere’s Absolute Defense Line'''

|-
| colspan="4" |'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' (1) Ally battleship is defeated (2) Any allied unit is defeated '''Skill Point:''' Clear the stage in 6 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Mobieus Zero (Mwu)
*All Char's Counter Attack, Stardust Memory, and Zeta Gundam units are lost <ul><li>Nu Gundam(Amuro)</li><li>Ra Cailum (Bright, Torres)</li><li>MP Nu Gundam (Keyra)</li><li>Albion (Synapse, Paserov)</li><li>GP03 Dendrobium (Kou)</li><li>GM Cannon II (Keith)</li><li>GM Custom (Burning)</li><li>GM Custom (Bate)</li><li>GM Custom (Monsha)</li><li>GM Cannon II (Adel)</li><li>Zeta Gundam (Kamille)</li><li>Re-GZ BWS (Four)</li><li>Methuss (Fa)</li><li>Super Gundam (Emma)</li><li>Jegan (Katz)</li></ul>

|- class="fc-route-h"
|'''Touma Route''' Great Mazinger, Venus A, Boss Borot Steel Jeeg, Big Shooter
|'''Kusuha Route''' Getter Robo G, Lady Command Mazinger Z, Diana A Combattler V
|'''Cobray Route''' ZZ Gundam, ReGZ (BWS) Mobieus Zero
|'''Selena Route'''
|-
| class="fc-route1" |'''第６話：平和、遥か遠く Scenario 6 - A Faraway Peace'''
| class="fc-route2" |'''第６話：北米戦線、異常アリ Scenario 6 - Abnormalities on the North American Front'''
| class="fc-route3" |'''第６話：GUNDAM出撃 Scenario 6 - Gundam, Sortie'''
| class="fc-route4" |'''第６話：ザ・ビギニング Scenario 6 - The Beginning'''

|-
|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Any ally is defeated '''Skill Point:''' Defeat all enemies in 5 turns; Defeat the Yamata no Orochi last '''Secret Requirements:''' '''Unit Acquisition:'''
*GaiGar (Gai)
*Mic Sounders XIII (Mic Sounders XIII)

|'''Victory Condition:''' (1) Ally reaches the designated area; (2) Defeat all enemies '''Defeat Condition:''' Any ally defeated '''Skill Point:''' Reach target location without engaging in combat '''Secret Requirements:''' '''Unit Acquisition:'''
*Mazinkaiser → Mazinger Z (Kouji)
*Shin Getter Robo → Getter Robo G (Ryoma, Hayato, Benkei) 
*Dancouga (Shinobu, Sara, Masato, Ryo)

|'''Victory Condition:'''
*1st Part: Sigu is defeated, Vesalius is defeated
*2nd Part: Defeat all enemies 
'''Defeat Condition:'''
*1st Part: Any ally is defeated
*2nd Part: Any ally is defeated 
'''Skill Point:''' Accomplish either objective in 4 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Clop Class Battleship (Federation Officer)
*Wing Gundam Zero Kai (Heero)
*Gundam Deathscythe Hell Kai (Duo)
*Gundam Sandrock Kai (Quatre)
*Taurus (Hilde)
*Strike Gundam (Kira)

|'''Victory Condition:''' (1) AS Soleares reaches the designated point in 4 turns; (2) Defeat all enemies '''Defeat Condition:''' (1) Begin turn 5 without meeting victory conditions, Any ally is defeated; (2) Any ally is defeated '''Skill Point:''' Defeat all enemies in 4 turns and get the AS Soleares to the target square '''Secret Requirements:''' '''Unit Acquisition:'''
*CGUE (Rau)
*GINN (ZAFT Soldier) x 2
*Vesarius (Ades)

|-
| class="fc-route1" |'''第７話：燃えろ宙！妖花フローラの挑戦 Scenario 7 - Space Burns! The Enchanting Flora’s Challenge!'''
| class="fc-route2" |'''第７話：怒りの獣、野生の咆哮 Scenario 7 - The Wild Roar of the Raging Beast'''
| class="fc-route3" |'''第７話：崩壊の大地 Scenario 7 - Collapsing Land'''
| class="fc-route4" |'''第７話：ワンズ・ジャスティス Scenario 7 - One’s Own Justice'''

|-
|'''Victory Condition:''' 
*1st Part: Defeat all enemies
*2nd Part: Defeat all enemies
'''Defeat Condition:''' 
*1st Part: Any ally defeated
*2nd Part: Any ally defeated
'''Skill Point:''' Defeat all enemies in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*AnRyu (AnRyu)
*KouRyu (KouRyu)

|'''Victory Condition:''' (1) Defeat all enemies; (2) Defeat Dangel '''Defeat Condition:''' Any ally is defeated '''Skill Point:''' Defeat all Zubanzas, Boazan Flying Saucers, and Red Baloms within 4 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Black Wing (Alan)

|'''Victory Condition:''' (1) Defeat all enemies; (2) Archangel reaches the designated point, Defeat all enemies '''Defeat Condition:''' (1) Mwu is defeated; (2) Ally battleship is defeated, Kira or Mwu are defeated '''Skill Point:''' Defeat all enemies in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Strike Gundam (Kira)
*Archangel (Murrue, Natarle)
*Aile, Sword and Launcher Striker packs for Strike Gundam

|'''Victory Condition:''' Any ally reaches the designated point '''Defeat Condition:''' Any ally is defeated '''Skill Point:''' Defeat all enemies in 5 turns and get an allied unit to the target square '''Secret Requirements:''' '''Unit Acquisition:'''
*Altron Gundam (Wufei)
*Gundam Heavyarms Kai (Trowa)
*CGuE (Rau)
*Vesarius (Ades)
*Aegis Gundam (Athrun)
*Blitz Gundam (Nicol)
*Buster Gundam (Dearka)
*Duel Gundam (Yzak)

|-
| class="fc-route1" |'''第８話：立ち上がれ！勇気ある者達 Scenario 8 - Stand Up, People of Courage!'''
| class="fc-route2" |'''第８話：輝け！不死身の勇者 Scenario 8 - Shine, Undying Hero!'''
| class="fc-route3" |'''第８話：誘う声 Scenario 8 - An Inviting Voice'''
| class="fc-route4" |'''第８話：インビジブル・イントルーダー Scenario 8 - Invisible Intruder'''

|-
|'''Victory Condition:''' (1) Defeat all enemies; (2) ZX-02 is defeated '''Defeat Condition:''' (1) Any ally is defeated; (2) Gai is defeated, J is defeated '''Skill Point:''' Defeat all enemies in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*GaiGar → GaoGaiGar
*Mic Sounders XIII gains "Disc P", "Disc M", and "Disc X" attacks
*Goldymarg (Goldymarg)
*HyoRyu (HyoRyu)
*EnRyu (EnRyu)
*Big Volfogg (Big Volfogg)

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' (1) Any ally is defeated; (2) Akira is defeated '''Skill Point:''' Defeat the Bramble (retreats at 4000HP (E) / 6000HP (N) / 8000HP (H)) '''Secret Requirements:''' '''Unit Acquisition:'''
*Raideen (Akira)
*Bluegar (Jinguji, Mari)

|'''Victory Condition:'''
*1st Part: (1) Vesalius is defeated; (2) Defeat all enemies
*2nd Part: (1) Defeat all enemies; (2) Defeat all enemies except Valk Baal 
'''Defeat Condition:'''
*1st Part: Ally battleship is defeated, Seolla or Cobray are defeated
*2nd Part: Any ally is defeated 
'''Skill Point:''' Defeat Aegis, Duel, Buster, and Blitz Gundams in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Zeta Gundam (Kamille)
*Re-GZ BWS (Four)
*Methuss (Fa)
*Super Gundam (Emma)
*Ra Cailum (Bright, Torres)
*MP Nu Gundam (Cobray)
*Werkbau (Cobray)
*G Defensor parts for Gundam Mk-II

|'''Victory Condition:''' Reach turn 6 '''Defeat Condition:''' Any ally is defeated '''Skill Point:''' Defeat all the Jegans '''Secret Requirements:''' '''Unit Acquisition:'''
*CGuE (Rau)
*Vesarius (Ades)
*Aegis Gundam (Athrun)
*Blitz Gundam (Nicol)
*Buster Gundam (Dearka)
*Duel Gundam (Yzak)

|-
| class="fc-route1" |'''第９話：内なる修羅 Scenario 9 - Demons of War Within'''
| class="fc-route2" |'''第９話：再会！ニューヨーク解放戦 Scenario 9 - Reunion! The Battle to Retake New York'''
| class="fc-route3" |'''第９話：正義の在処 Scenario 9 - Where Justice Can Be Found'''
| class="fc-route4" |'''第９話：アベンジャー Scenario 9 - Avenger'''

|-
|'''Victory Condition:''' (1) Defeat all enemies; (2) Defeat Raioh '''Defeat Condition:''' (1) Any ally defeated; (2) Sanger is defeated '''Skill Point:''' Defeat the Bramble in 4 turns (retreats at 4000HP (E) / 6000HP (N) / 8000HP (H)) '''Secret Requirements:''' '''Unit Acquisition:'''
*Dygenguar (Sanger)
*Huckebein Mk-III Trombe (Ratsel)
*Raideen (Akira)
*Bluegar (Jingunji, Mari)
*Mazinger Z (Kouji)
**Mazinger Z (Kouji) and Great Mazinger (Tetsuya) gain the "Double Mazinger Blade" and "Double Burning Fire" combination attacks
*Diana A (Sayaka)
*Getter Robo G (Ryoma, Hayato, Benkei)
*Lady Command (Michiru)
*Combattler V (Hyoma, Juzo, Daisaku, Chizuru, Kosuke)

|'''Victory Condition:''' (1) Defeat all enemies; (2) Dancouga reaches the designated point; (3) Defeated Deathgaia, Dangel, and Warchamedes '''Defeat Condition:''' (1) Shinobu, Kusuha, or Bullet are defeated; (2) Shinobu, Kusuha, Bullet, or Alan are defeated; (3) Alan is defeated '''Skill Point:''' Clear the map in 8 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Black Wing (Alan)
*Dygenguar (Sanger)
*Huckebein Mk-III Trombe (Ratsel)

|'''Victory Condition:''' (1) Vesalius is defeated; Reduce the Muge Battleship under 2000 HP before it reaches the edge of the map '''Defeat Condition:''' (1) Ally battleship is defeated; (2) Muge Battleship reaches the western edge of the map '''Skill Point:''' Defeat all enemies before reducing the Muge Mothership's HP below 2000 or defeating it '''Secret Requirements:''' '''Unit Acquisition:'''

|'''Victory Condition:''' (1) Reduce the Archangel's HP to 50% or less, Defeat all enemies besides the Archangel; (2) Reduce the Varuch Ishar to 4000 HP or less. '''Defeat Condition:''' Any ally is defeated '''Skill Point:''' Defeat the Varuch Ishar (flees at 4000 HP) '''Secret Requirements:''' '''Unit Acquisition:'''
*CGuE (Rau)
*Vesarius (Ades)
*Aegis Gundam (Athrun)
*Blitz Gundam (Nicol)
*Buster Gundam (Dearka)
*Duel Gundam (Yzak)

|-
| class="fc-route1" |'''第１０話：激震の地底帝国 Scenario 10 - Tremors in the Underground Empire'''
| class="fc-route2" |'''第１０話：龍を喰らうもの Scenario 10 - That Which Devours the Dragon'''
| class="fc-route3" |'''第１０話：消えていく光 Scenario 10 - The Fading Light'''
| class="fc-route4" |'''第１０話：グッバイ・フレンズ Scenario 10 - Goodbye, Friends'''

|-
|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' All allies defeated, Science Fortress Lab destroyed '''Skill Point:''' Clear the map without the Science Fortress Lab taking damage '''Secret Requirements:''' '''Unit Acquisition:'''
*Raioh loses the "System LIOH" ability
*Raioh gains the "Rising Meteor" attack
*Dygenguar (Sanger)
*Huckebein Mk-III Trombe (Ratsel)

|'''Victory Condition:''' (1) Sanger is defeated; (2)(3) Defeat all enemies; (4)(5) ZX-02 is defeated '''Defeat Condition:''' (1) Bullet is defeated; (2) Sanger or Rastel are defeated; (3) Any ally is defeated; (4) Guy, Sanger, or Rastel are defeated; (5) Guy, J, Sanger, or Rastel are defeated '''Skill Point:''' Reduce Shin RyuOuKi to below 10000 HP within 3 turns of its arrival '''Secret Requirements:''' '''Unit Acquisition:'''
*Dygenguar (Sanger)
*Huckebein Mk-III Trombe (Ratsel)
*GaiGar (Guy)
*GaoGaiGar (Guy)
*Mic Sounders XIII (Mic Sounders XIII)
*Goldymarg (Goldymarg)
*HyoRyu (HyoRyu)
*EnRyu (Enryu)
*Volfogg (Volfogg)
*Great Mazinger (Tetsuya)
*Venus A (Jun)
*Boss Borot (Boss, Mucha, Nuke)
*Kotetsu Jeeg (Jeeg)
*Big Shooter (Miwa)
*Stealth Gao II parts for GaoGaiGar
*Gunbot parts for Volfogg

|'''Victory Condition:''' (1) Reduce the Blitz Gundam to under 7000HP; (2) The Gamow is defeated; (3) The Gamow is defeated and Imperial Guard are defeated '''Defeat Condition:''' (1)(2) Any ally is defeated; (3) Ally battleship is defeated '''Skill Point:''' Defeat the Gamow (retreats at 4000HP (E) / 6000HP (N) / 8000HP (H)) '''Secret Requirements:''' '''Unit Acquisition:'''
*Qubeley Mk-II (Puru)
*Qubeley Mk-II (Puru Two)
*Hyaku Shiki (Beecha)
*Gundam Mk-II (Elle)
*Jegan (Mondo)
*Megarider (Iino)
*YF-19 (Isamu)
*YF-21 (Guld)

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' (1) Any ally is defeated; (2) Ally battleship is defeated; (3) Ally battleship is defeated, Isamu or Guld are defeated '''Skill Point:''' Clear the map in 6 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Zeta Gundam (Kamille)
*Methuss (Fa)
*ReGZ (Four)
*Super Gundam (Emma)
*Mobius Zero (Mwu)
*Wing Gundam Zero Kai (Heero)
*Gundam Sandrock Kai (Quatre)
*Gundam Deathscythe Hell Kai (Duo)
*Taurus (Hilde)
*ZZ Gundam (Judau)
*ReGZ BWS (Roux)
*Qubeley Mk-II (Puru)
*Qubeley Mk-II (Puru Two)
*Hyaku Shiki (Beecha)
*Gundam Mk-II (Elle)
*Jegan (Mondo)
*Megarider (Iino)
*YF-19 (Isamu)
*YF-21 (Guld)

|-
| class="fc-route1" |'''第１１話：戦場の邂合、そして決別 Scenario 11 - An Battlefield Encounter, and Then a Departure'''
| class="fc-route2" |'''第１１話：新たなる人類 Scenario 11 - A New Mankind'''
| class="fc-route3" |'''第１１話：君と戦場で Scenario 11 - On the Battlefield with You'''
| class="fc-route4" |'''第１１話：パワー・ジャンクション Scenario 11 - Power Junction'''

|-
|'''Victory Condition:''' (1) Defeat all enemies; (2) Defeat Vesalius '''Defeat Condition:''' Ally battleship is defeated, Kira or Mwu are defeated '''Skill Point:''' Defeat all enemies in 7 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Archangel (Murrue)
*Strike Gundam (Kira)
*Moebius Zero (Mwu)
*Stealth Gao II Parts for GaoGaiGar
*Aile, Sword, and Launcher Striker packs for Strike Gundam

|'''Victory Condition:''' (1) Defeat all enemies; (2) Vesalius is defeated '''Defeat Condition:''' (1) Ally battleship is defeated, Kira or Mwu are defeated; (2) Ally battleship is defeated '''Skill Point:''' Defeat all enemies in 7 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Strike Gundam (Kira)
*Mobeius Zero (Mwu)
*Archangel (Murrue, Natarle)
*YF-19 (Isamu)
*YF-21 (Guld)
*Aile, Sword, and Launcher Striker packs for Strike Gundam

|'''Victory Condition:''' (1) Defeat all enemies (2) ZX-02 is defeated '''Defeat Condition:''' (1) Kira is defeated; (2) Any ally is defeated '''Skill Point:''' Defeat all enemies in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Wildburger (Arado)
*Great Mazinger (Tetsuya)
*Venus A (Jun)
*Boss Borot (Boss)
*Dancouga (Shinobu, Sarah, Masato, Ryo)
*Raideen (Akira)
*Bluegar (Jingunji)
*Mazinger Z (Kouji)
*Diana A (Sayaka)
*Getter Robo G (Ryoma, Hayato, Benkei)
*Lady Command (Michiru)
*Star Gaogaigar (Gai)
*Goldymarg (Goldymarg)
*Mic Sounders the 13th (Mic)
*Hyoryu (Hyoryu)
*Enryu (Enryu
*Big Volfogg (Volfogg)

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Defeat all enemies in 7 turns '''Secret Requirements:''' '''Unit Acquisition:'''

|-
| class="fc-route1" |'''第１２話：守るべきモノ Scenario 12 - What You Must Protect'''
| class="fc-route2" |'''第１２話：別れの宇宙 Scenario 12 - Farewells in Space'''
| class="fc-route3" |'''第１２話：ディーンの火 Scenario 12 - The Flames of Deen'''
| class="fc-route4" |'''第１２話：コンクルージョン Scenario 12 - Conclusion'''

|-
|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' All enemies defeated '''Skill Point:''' Defeat all enemies in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Gundam Wing Zero (Heero)
*Gundam Deathscythe Hell Kai (Duo)
*Gundam Sandrock Kai (Quatre)
*Gundam Heavyarms Kai (Trowa)
*Altron Gundam (Wufei)
*Taurus (Hilde)
*Zeta Gundam (Kamille)
*Re-GZ BWS (Four)
*Methuss (Fa)
*Gundam Mk-II (Emma)
*ZZ Gundam (Judau)
*Qubeley Mk-II (Puru)
*Qubeley Mk-II (Puru Two)
*Hyaku Shiki (Beecha)
*Gundam Mk-II (Elle)
*Jegan (Mondo)
*Megarider (Iino)
*YF-19 (Isamu) (After stage)
*YF-21 (Guld) (After stage)
*G Defensor parts for Gundam Mk-II

|'''Victory Condition:''' (1) Defeat all enemies; (2) Defeat Shin RyoOhKi; (3) Defeat the Imperial Guard '''Defeat Condition:''' (1)(2) Any ally is defeated; (3) Ally battleship is defeated '''Skill Point:''' Defeat Shin RyuOhKi before Victory Conditions are met '''Secret Requirements:''' '''Unit Acquisition:'''
*Gundam Wing Zero Kai (Heero)
*Gundam Deathscythe Hell Kai (Duo)
*Gundam Sandrock Kai (Quatre)
*Gundam Heavyarms Kai (Trowa)
*Altron Gundam (Wufei)
*Taurus (Hilde)
*Zeta Gundam (Kamille)
*Re-GZ BWS (Four)
*Methuss (Fa)
*Gundam Mk-II (Emma)
*ZZ Gundam (Judau)
*Qubeley Mk-II (Puru)
*Qubeley Mk-II (Puru Two)
*Hyaku Shiki (Beecha)
*Gundam Mk-II (Elle)
*Jegan (Mondo)
*Megarider (Iino)
*G Defensor parts for Gundam Mk-II

|'''Victory Condition:''' (1) Bramble, Magnum, and Zangaioh are defeated; (2) Defeat all enemies; (3) Defeat Valk Baal '''Defeat Condition:''' (1) Ally battleship is defeated, Arado is defeated; (2) Cobray, Arado or Seolla are defeated; (3) Cobray, Viletta, Sanger, or Rastel are defeated '''Skill Point:''' Clear the map in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Werkbau gains the "Axion Buster" attack
*Gundam Heavyarms Kai (Trowa)
*Altron Gundam (Wufei)
*Dygenguar (Sanger)
*Huckebein Mk-III Trombe (Ratsel)
*R-GUN Powered (Viletta)

|'''Victory Condition:''' (1)(2) ZX-08 is defeated; (3) Varuch Ishar is defeated '''Defeat Condition:''' (1) Ally battleship is defeated, (2) Ally battleship is defeated, J is defeated; (3) Ally battleships is defeated, Selena, Viletta, Sanger, or Rastel are defeated '''Skill Point:''' Defeat ZX-02 in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*J-ARK (J, Tomoro)
*R-GUN Powered (Viletta)
*Dygenguar (Sanger)
*Huckebein Mk-III Trombe (Ratsel)
*Vegalion (Slay)

|-
| colspan="4" class="fc-std-sc" |'''第１３話：もう一度、自らの足で Scenario 13 - Once Again, On Your Feet'''

|-
| colspan="4" |'''Victory Condition:''' ZX-06 is defeated '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Clear the map in 6 turns; Defeat all other enemies before ZX-06 '''Secret Requirements:''' '''Unit Acquisition:'''
*Evangelion Unit 0 Custom (Rei)
*Evangelion Unit 1 (Shinji)
*Evangelion Unit 2 (Asuka)

|-
| colspan="4" class="fc-std-sc" |'''第１４話：オペレーション・ハルパー Scenario 14 - Operation Harper'''

|-
| colspan="4" |'''Victory Condition:''' Reduce Hermoz Ehad's HP to below 120000HP (E) / 90000HP (N) / 80000HP (H) '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Achieve the victory condition in 7 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*HyoRyu (HyoRyu)
*EnRyu (EnRyu)

|-
| colspan="4" class="fc-std-sc" |'''第１５話：遥かなる凱歌 Scenario 15 - A Faroff Victory Song'''

|-
| colspan="4" |'''Victory Condition:''' Defeat the Combine Primeval '''Defeat Condition:''' Ally Battleship is defeated, J is defeated '''Skill Point:''' Defeat all enemies in 7 turns, leaving the combined Primeval for last '''Secret Requirements:''' '''Unit Acquisition:'''
*J-Ark (J, Tomoro)
*ALL units are unavailable until clearing Scenario 18

|-
| colspan="4" class="fc-std-sc" |'''第１６話：導かれる魂、銀河で Scenario 16 - Souls Guided by the Galaxy'''

|-
| colspan="4" |'''Victory Condition:'''
*1st Part: Defeat all enemies
*2nd Part: Defeat all enemies
'''Defeat Condition:'''
*1st Part: Ideon is defeated
*2nd Part: Any ally is defeated
'''Skill Point:''' Defeat all enemies in 4 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Ideon (Cosmo, Kasha, Bess → Moera)
*VF-17S Nightmare (Kinryu)
*VF-17D Nightmare (Gamlin)
*VF-17D Nightmare (Docker)
*Battle 7 (Max, Exedore, Miho, Sally)
*Soloship (Bess)

|-
| colspan="4" class="fc-std-sc" |'''第１７話：ディスコード・ハーモニー Scenario 17 - Discord / Harmony'''

|-
| colspan="4" |'''Victory Condition:''' (1)(2) Defeat the Zig Mac; (3) Defeat FZ-109F Elgarthorn '''Defeat Condition:''' (1) Any ally is defeated; (2) Any ally is defeated, Zig Mac moves next to the Soloship (3) '''Skill Point:''' Meet victory the condition in 4 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Battle 7 can now transform into "Enhanced Attack Mode"
*VF-17D Nightmare (Docker)

|-
| colspan="4" class="fc-std-sc" |'''第１８話：銀河流浪 Scenario 18 - Galactic Wandering'''

|-
| colspan="4" |'''Victory Condition:'''
*1st Part: Defeat FZ-109F Elgarthorn
*2nd Part: Defeat Zig Mac
'''Defeat Condition:'''
*1st Part: Any ally is defeated
*2nd Part: Any ally is defeated
'''Skill Point:''' Meet victory conditions in 3 turns '''Secret Requirements:'''
*Duel Gundam
**Take the Earth Route
*VF-1J S Valkyrie
**Take the Earth Route
*LaGOWE
**Take the Earth Route
'''Unit Acquisition:'''
*VF-17D Nightmare (Physica)
*VF-17S (Kinryu), VF-17D (Gamlin), and VF-17D (Physica) gain the "Diamond Force Attack" combination Attack
*Ideon gains the "Omnidirectional Missile" attack
*All Ideon and Macross 7 units are lost <ul><li>Ideon (Cosmo, Kasha, Moera)</li><li>Soloship (Bess)</li><li>Battle 7 (Max, Exedore, Miho, Sally)</li><li>VF-17S Nightmare (Kinryu)</li><li>VF-17D Nightmare (Physica)</li><li>VF-17D Nightmare (Gamlin)</li>

|}
 

==Stages 19 - 33==
{| width="100%"
|- class="fc-route-h"
| width="50%" |'''Descend to Earth''' Gundam 0083 Gundam Z ZZ Gundam Char's CounterAttack Gundam Wing Gundam SEED Macross 7 Macross Plus Evangelion
| width="50%" |'''Mount a Lunar offensive''' GaoGaiGar Ideon Mazinger (Z, Great) Getter Robo Steel Jeeg Combattler V Gaiking Raideen Dancouga GoShogun

|-
| class="fc-route1" |'''第１９話：宇宙に降る星 Scenario 19 - Stars Falling in Space'''
| class="fc-route3" |'''第１９話：悪夢への招待状 Scenario 19 - A Written Invitation to a Nightmare'''

|-
|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated, Kira is defeated '''Skill Point:''' Destroy all enemies in 6 turns '''Secret Requirements:'''
*Duel Gundam
**Destroy Yzak.
'''Unit Acquisition:'''
*Nu Gundam (Amuro)
*Jegan (Katz)
*MP Nu Gundam (Kayra)
*Incom and Fin Funnel parts for MP Nu Gundam
*Kira unlocks the SEED pilot skill
*Skygrasper
*Ra Cailum (Bright, Torres)

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Destroy the Muge battleship in 6 turns (retreats at 6000HP (E) / 8000HP (N) / 10000 HP (H)) '''Secret Requirements:''' 
'''Unit Acquisition:'''
*Daiku Maryu (Pete, Midori)
*Gaiking (Sanshiro)
*Skylar (Fan Li)
*Bazolar (Yamagatake)
*Nesser (Bunta)

|-
| class="fc-route1" |'''第２０話：強襲、砂漠の虎 Scenario 20 - Assault of the Desert Tiger'''
| class="fc-route3" |'''第２０話：異邦人達の帰還 Scenario 20 - The Foreigners Return'''

|-
|'''Victory Condition:''' Defeat the Lesseps '''Defeat Condition:''' Ally battleship is defeated, Kira is defeated '''Skill Point:''' Defeat the Lesseps in 6 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Kira unlocks the SEED pilot skill
*Albion (Synapse, Paserov)
*Gundam Stamen (Kou)
*GM Cannon II (Keith)
*GM Custom (Burning)
*GM Custom (Bate)
*GM Custom (Monsha)
*GM Cannon II (Adel)
*Gundam GP01fb
*Armed Base Orchis parts for Gundam Stamen

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Destroy Helmut's Muge battleship in 4 turns (retreats at 6000HP (E) / 8000HP (N) / 10000 HP(H)) '''Secret Requirements:''' '''Unit Acquisition:'''
*Ideon (Cosmo, Kasha, Moera)
*Ideon gains the "Ideon Sword" and "Ideon Sword (MAP)" attacks
*Soloship (Bess, Hatari)

|-
| class="fc-route1" |'''第２１話：プリティ・デビル Scenario 21 - Pretty Devil'''
| class="fc-route3" |'''第２１話：裏切りの代償 Scenario 21 - The Cost of Betrayal'''

|-
|'''Victory Condition:'''
*1st Part: Gigil's ship is defeated
*2nd Part: Gigil's ship is defeated 
'''Defeat Condition:'''
*1st Part: Any ally is defeated
*2nd Part: Basara is defeated
'''Skill Point:''' Destroy Gigil before he moves adjacent to Sivil '''Secret Requirements:'''
*LaGOWE
**Waltfeld and Dacosta must both survive and get a combined total of 10 kills or more on the first half of the scenario.
*VF-1J
**Milia must get a total of 10 kills in the first half of the scenario.
'''Unit Acquisition:'''
*VF-17S Nightmare (Kinryu)
*VF-17D Nightmare (Gamlin)
*VF-17D Nightmare (Physica)
*VF-1J S Valkyrie (Milia)
*LaGOWE (Waldfelt)
*BuCUE (Dacosta)
*Skygrasper (Cagalli)
*VF-19 Kai Fire Valkyrie (Basara)
*VF-17S Nighmare (Milia)
*VF-1J S Valkyrie

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Any ally is defeated '''Skill Point:''' Destroy all enemies in 5 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Goshogun (Shingo, Killy, Remi)
*Good Thunder (Sabranth)

|-
| class="fc-route1" |'''第２２話：砂塵の果て Scenario 22 - Beyond the Clouds of Sand'''
| class="fc-route3" |'''第２２話：発動する力、無限大 Scenario 22 - Infinite Activation Power'''

|-
|'''Victory Condition:''' (1) Defeat the Lesseps; (2) Waltfeld is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated '''Skill Point:''' Defeat the Lesseps in 5 turns '''Secret Requirements:'''
*LaGOWE
**Kira must destroy Waltfeld's LaGOWE while in SEED. (Kira has to activate SEED mode before the event that ends the stage.)
'''Unit Acquisition:'''
*Kira unlocks the SEED pilot skill

|'''Victory Condition:''' (1) Soloship reaches the computer facility; (2) Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Get the Soloship to the indicated area in 4 turns without it taking any damage '''Secret Requirements:''' '''Unit Acquisition:'''
*HyoRyu (HyoRyu)
*EnRyu (EnRyu)

|-
| class="fc-route1" |'''第２３話：エモーション・ハイ Scenario 23 - Emotion High'''
| class="fc-route3" |'''第２３話：決戦！地獄の月荒野 Scenario 23 - Decisive Battle in the Hellish Lunar Wilderness!'''

|-
|'''Victory Condition:''' (1) Defeat 2 Ghosts; (2) Defeat all enemies; (3) Basara sings to Sivil, All ZAFT forces are defeated '''Defeat Condition:''' (1) Ally battleship is defeated, Battle 7 is defeated; (2) Ally battleship is defeated, Battle 7 is defeated, Isamu or Guld are defeated; (3) Ally battleship is defeated, Isamu, Guld, or Basara are defeated '''Skill Point:''' Clear the map in 9 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*YF-19's "Full Volley" attacks gains +200 Attack power
*YF-19 and YF-21 gain the "Double Pinpoint Barrier Punch" combination attack
*Battle 7 (Max, Exedore, Miho, Sally)
*VF-19 Kai Fire Valkyrie (Basara)
*Mazinkaiser
*Shin Getter Robo

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Clear the map in 9 turns '''Secret Requirements:''' '''Unit Acquisition:'''

|-
| colspan="2" class="fc-std-sc" |'''第２４話：戦神の星で Scenario 24 - On the Planet of the War God'''

|-
| colspan="2" |'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' (1) Any ally is defeated; (2) Ally battleship is defeated '''Skill Point:''' Destroy all enemies in 3 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*VF-19 Kai Fire Valkyrie (Basara)
*VF-11 MAXL Kai (Mylene)
*VF-17 Kai Nightmare (Ray, Veffidas)
*Tallgeese III (Zechs)
*Taurus (Noin)
*Voltes V (Kenichi, Ippei, Daijiroh, Hiyoshi, Megumi)
*Daimos (Kazuya)
*Garuba FX-II (Kyoshiro, Nana)

|-
| colspan="2" class="fc-std-sc" |'''第２５話：選ばれし者、選びし者 Scenario 25 - Those Who Are Chosen, Those Who Choose'''

|-
| colspan="2" |'''Victory Condition:''' (1) Hermos is defeated; (2) Zifrud is defeated '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Clear the map in 8 turns '''Secret Requirements:''' '''Unit Acquisition:'''

|-
| colspan="2" class="fc-std-sc" |'''第２６話：かりそめの旅人 Scenario 26 - Transitory Traveler'''

|-
| colspan="2" |'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated, Temjin, Fei Yen, or Apharmd are defeated '''Skill Point:''' Destroy all enemies in 3 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Temjin 747J (Chief)
*Fei Yen the Knight (Fei)
*Apharmd The Hatter (The Hatter)

|-
| colspan="2" class="fc-std-sc" |'''第２７話：勇気ある者達の誓い Scenario 27 - The Oath of the Courageous'''

|-
| colspan="2" |'''Victory Condition:'''
*1st Part: Defeat all enemies
*2nd Part: (1) Defeat all enemies; (2) Defeat the Z-Master within (10 (E) / 7 (N) / 5 (H)) turns 
'''Defeat Condition:'''
*1st Part: Ally battleship is defeated, Gai is defeated
*2nd Part: (1) Ally battleship is defeated, Gai or J are defeated; (2) (10 (E) / 7 (N) / 5 (H)) turns have passed, Ally battleship is defeated, Gai or J are defeated 
'''Skill Point:''' Destroy all enemies in 7 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*J-Ark (J, Tomoro)

|-
| colspan="2" class="fc-std-sc" |'''第２８話：いつか星の海へ Scenario 28 - Someday, In the Sea of Stars'''

|-
| colspan="2" |'''Victory Condition:''' (1)(2) Defeat the Zonder Robo; (3) Defeat the Zonder Robo within 6 attacks from Star GaoGaiGar; (4)(5) Defeat all enemies '''Defeat Condition:''' (1) Galeon is defeated; (2) Ally battleship is defeated, Galeon is defeated; (3) Ally battleship or Gai are defeated, Zonder Robo is not defeated within 6 attacks from Star GaoGaiGar (4) Main Character is defeated; (5) Ally battleship is defeated '''Skill Point:''' Destroy the Zonuder Robo in 5 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Galeon (Galeon)
*Star GaoGaiGar/GaoGaiGar (Gai)
*YF-19 (Isamu)
*YF-21 (Guld)
*Battle 7 (Max)
*VF-17S Nightmare (Milia)
*VF-17D Nightmare (Gamlin)
*VF-17D Nightmare (Physica)
*VF-19 Kai Fire Valkyrie (Basara)
*VF-11 MAXL Kai (Mylene)
*VF-17 Kai Nightmare (Ray, Veffidas)
*HyoRyu (HyoRyu)
*EnRyu (EnRyu)
*Goldymarg (Goldymarg)
*Volfogg (Volfogg)
*Mic Sounders XIII (Mic Sounder XIII)
*Ideon (Cosmo, Kasha, Moera)
*Soloship (Bess, Hatari)
*Star GaoGaiGar (Guy, Choryujin, Goldymarg, Mic, Volfogg)
*Dygenguar (Sanger)
*Aussenseiter (Ratsel)
*R-Blade Custom (Ryusei)
*R-Gun Powered (Viletta)

|-
| colspan="2" class="fc-std-sc" |'''第２９話：押された烙印 Scenario 29 - Branded with the Mark'''

|-
| colspan="2" |'''Victory Condition:''' (1)(2) Defeat all enemies '''Defeat Condition:''' (1) Ally battleship is defeated; (2) Ally battleship is defeated, Cagalli is defeated '''Skill Point:''' Destroy all enemies in 6 turns '''Secret Requirements:'''
*Destroid Monster
**Take the Space Route
*FBz-99G
**Take the Space Route
*Strike Rouge IWSP
**Cagalli must have 30 or more kills by the end of this stage.
***Take the Alaska Route
*Duel Gundam
**Take the Alaska Route
'''Unit Acquisition:'''
*GaoFighGar (Guy)
*HyoRyu (HyoRyu)
*EnRyu (EnRyu)
*Goldymarg (Goldymarg)
*Volfogg (Volfogg)/Big Volfogg (Big Volfogg)
*Mic Sounders XIII (Mic Sounders XIII)
*AnRyu (AnRyu)
*KouRyu (KouRyu)
*Ra Cailum (Bright, Torres)

|- class="fc-route-h"
|'''Head to Alaska''' Gundam (0083, Z, ZZ, CCA, Wing, SEED) Daitarn 3 Mazinger (Z, Great) Steel Jeeg Voltes V Daimos Dancouga Evangelion
|'''Go to Space''' GaoGaiGar Ideon Getter Robo Combattler V GaiKing Raideen Goshogun Macross (DYRL, 7, Plus) Virtual On

|-
| class="fc-route2" |'''第３０話：終わらない閃光 Scenario 30 - Unending Flashes of Light'''
| class="fc-route4" |'''第３０話：ロスト・ディーヴァ Scenario 30 - Lost Diva'''

|-
|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated, Kira is defeated '''Skill Point:''' Clear the map in 7 turns '''Secret Requirements:'''
*Strike Rouge IWSP
**Mwu must defeat Dearka
**After the event, Kira must defeat Athrun while both are in SEED.
'''Unit Acquisition:'''
*Skygrasper (Cagalli)
*Strike Gundam (Kira)
*Kira unlocks the SEED pilot skill
*Cagalli unlocks the SEED pilot skill (needs verification)
*Archangel loses Natarle as a subpilot

|'''Victory Condition:''' (1)(2) Defeat all enemies '''Defeat Condition:''' (1) Any ally is defeated: (2) Ally battleship is defeated, Fire Bomber, Diamond Force, or Skull Squadron are defeated '''Skill Point:''' In 6 turns, destroy Glavil and Gavil. You must destroy Glavil before Gavil '''Secret Requirements:'''
*Gavil and FBz-99G Zaubergeran
**Gamlin must defeat Gavil
'''Unit Acquisition:'''
*YF-19 (Isamu) (Before Deploying)
*YF-21 (Guld) (Before Deploying)
*VF-1S S Valkyrie (Focker)
*VF-1S S Valkyrie (Hikaru)
*VF-1A S Valkyrie (Kakizaki)
*VF-17D Nightmare (Gamlin)
*VF-17D Nightmare (Physica)
*VF-19 Kai Fire Valkyrie (Basara)
*VF-11 MAXL Kai (Mylene)
*VF-17 Kai Nightmare (Ray, Veffidas)

|-
| class="fc-route2" |'''第３１話：青き清浄なる世界のために Scenario 31 - For Our Blue & Pure World'''
| class="fc-route4" |'''第３１話：禁断の惑星へ Scenario 31 - To the Forbidden Planet'''

|-
|'''Victory Condition:''' (1) Defeat all enemies; (2)(3) Defeat all Mobile Dolls, All ZAFT Units retreat '''Defeat Condition:''' (1)(2) Ally battleship is defeated, Heero is defeated; (3) Ally battleship is defeated '''Skill Point:''' Do not let a single ZAFT machine get shot down '''Secret Requirements:'''
*Duel Gundam
**Yzak must survive the scenario.
'''Unit Acquisition:'''
*Archangel gains Newman as a subpilot
*Freedom Gundam (Kira)
*Daitarn 3 (Banjo)
*Black Wing (Alan)

|'''Victory Condition:'''
*1st Part: Defeat all enemies
*2nd Part: Defeat Gepelnitch
'''Defeat Condition:'''
*1st Part: Any ally is defeated
*2nd Part: Ally battleship is defeated, Basara or Gamlin are defeated
'''Skill Point:''' In 7 turns, destroy Glavil and Gavil and make Gepelnitch's ship retreat (at 50,000 HP) '''Secret Requirements:'''
*Destroid Monster
**Get the Skill Point on this stage.
*Gavil and FBz-99G Zaubergeran
**Gamlin must defeat Gavil 
'''Unit Acquisition:'''
*Destroid Monster

|-
| class="fc-route2" |'''第３２話：守護神の巫女 Scenario 32 - Priestess of the Guardian God'''
| class="fc-route4" |'''第３２話：インフィニティ・ソウル Scenario 32 - Infinity Soul'''

|-
|'''Victory Condition:''' (1)(2) Defeat all enemies '''Defeat Condition:''' Any Ally is defeated; Ally battleship is defeated, Sanger or Rastel are defeated '''Skill Point:''' In 5 turns, destroy the General of Hell or Flora. '''Secret Requirements:''' '''Unit Acquisition:'''
*Dygenguar (Sanger)
*Assenseiter (Ratsel)

|'''Victory Condition:''' (1) Valgo is defeated; (2)(3) Defeat all enemies '''Defeat Condition:''' (1) Mylene, Ray, or Gamlin are defeated; (2) Basara, Mylene, Ray, or Gamlin are defeated; (3) Ideon is defeated '''Skill Point:''' In 6 turns, destroy Valgo '''Secret Requirements:'''
*Gavil and FBz-99G Zaubergeran
**Gamlin must defeat Gavil 
'''Unit Acquisition:'''
*VF-17D Nightmare → VF-17S Nightmare (Gamlin)
*VF-17D Nightmare (Docker)
**VF-17S (Gamlin), VF-17D (Physica) and VF-17D (Docker) gain the "Diamond Force Attack" combination attack
*VF-19 Kai Fire Valkyrie, VF-11 MAXL Kai, and VF-17 Kai Nightmare gain the "Sound Booster" mech ability
**All VF-19 Kai Fire Valkyrie SB Songs gain (MAP) and (ALL) combination attack variants when Sound Booster activates.
**All VF-11 MAXL Kai SB Songs gain (MAP) and (ALL) combination attack variants when Sound Booster activates.
*Ideon (Cosmo, Kasha, Moera)
** Ideon gains the "Ideon Sword" and "Ideon Sword (MAP)" attacks when IDE gauge is full, and HP is below 30%
*Soloship (Bess, Hatari)

|-
| class="fc-route2" |'''第３３話：暁への脱出 Scenario 33 - Escape to Daybreak'''
| class="fc-route4" |'''第３３話：受け継ぎし遺産 Scenario 33 - The Successor's Inheritance'''

|-
|'''Victory Condition:''' (1)(2) Defeat all enemies besides the Albion '''Defeat Condition:''' (1) Ally battleship is defeated, Kira, Shinobu, or Alan are defeated, Albion is defeated; (2) Kira, Shinobu, Alan, Mwu, or Cagalli are defeated '''Skill Point:''' In 8 turns, destroy all enemies except the Albion '''Secret Requirements:''' '''Unit Acquisition:'''
*Strike Gundam (Mwu)
*Strike Rouge (Cagailli)
*M1 Astray (Juri)
*M1 Astray (Mayura)
*M1 Astray (Asagi)
*Justice Gundam (Athrun)
*Buster Gundam (Dearka)
*Mazinger Z gains the "Giant Swing Rocket Punch" attack
*Great Mazinger gains the "Great Booster" attack
*Koutetsu Jeeg stats are enhanced and can transform into Jeeg Panzeroid
*Dancouga and Black Wing can combine into Final Dancouga.

|'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated, Akira or Jinguji are defeated '''Skill Point:''' In 8 turns, destroy Etzira, Valgo, Glavil, Gabro Zan, and Gije '''Secret Requirements:''' '''Unit Acquisition:'''
*VF-1A S Valkyrie (Kakizaki)
*Raideen gains the Mutron Open mech ability
*Ideon (Cosmo, Kasha, Moera)
*Soloship (Bess, Hatari)
*Battle 7 (Max, Exedore, Miho, Sally)
*VF-1S S Valkyrie (Fokker)
*VF-1S S Valkyrie (Hikaru)
*VF-1A S Valkyrie (Kakizaki)
*YF-19 (Isamu)
*YF-21 (Guld)
*VF-19 Kai Fire Valkyrie (Basara)
*VF-11 MAXL Kai (Mylene)
*VF-17 Kai Nightmare (Ray, Veffidas)
*VF-17S Nightmare (Gamlin)
*VF-17D Nightmare (Physica)
*VF-17D Nightmare (Docker)

|}
 

==Stages 34 - 44==
{| width="100%"
|- class="fc-route-h"
| width="25%" |'''Touma Route'''
| width="25%" |'''Kusuha Route'''
| width="25%" |'''Cobray Route'''
| width="25%" |'''Selena Route'''

|-
| class="fc-route1" |'''第３４話：武人の心、その意味 Scenario 34 - Why a Warrior Fights'''
| class="fc-route2" |'''第３４話：怒りの強念者 Scenario 34 - The Wrath of a Esper'''
| class="fc-route3" |'''第３４話：虚ろな魂の捕囚 Scenario 34 - Captivity of the Hollow Soul'''
| class="fc-route4" |'''第３４話：ベトレイヤー Scenario 34 - Betrayer'''

|-
|'''Victory Condition:'''
*1st Part: (1)(2) Defeat all enemies
*2nd Part: Bemidoban is defeated 
'''Defeat Condition:'''
*1st Part: (1) Ally battleship is defeated; (2) Ally battleship is defeated, Touma is defeated
*2nd Part: Touma is defeated
'''Skill Point:''' Defeat all enemies within 6 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Raioh (Touma)
*Mazinger Z, Great Mazinger and Getter Dragon gain the "F Dynamic Special" combination attack

|'''Victory Condition:'''(1)(2) Shin RyuOhKi is defeated; (3)(4) Bemidoban and Shmuel are defeated '''Defeat Condition:''' (1) Any ally is defeated; (2) Kusuha is defeated; (3) Kusuha is defeated, Ally battleship is defeated; (4) Ally battleship is defeated '''Skill Point:''' Destroy the Bemidoban (retreats (8000 (E) / 10000 (N) / 12000 (H)) HP) '''Secret Requirements:''' '''Unit Acquisition:'''
*Mazinger Z, Great Mazinger and Getter Dragon gain the "F Dynamic Special" combination attack
*Dygenguar (Sanger)
*Aussenseiter (Ratsel)

|'''Victory Condition:''' Shin RyuOhKi is defeated '''Defeat Condition:''' Ally battleship is defeated, Cobray, Arad, or Seolla are defeated '''Skill Point:''' Defeat Shin RyuOuKi within 6 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Werkbau (Cobray)
*Mazinger Z, Great Mazinger and Getter Dragon gain the "F Dynamic Special" combination attack

|'''Victory Condition:''' (1) Shmuel is defeated; (2)(3) Bemidoban defeated Shin RyuOhKi '''Defeat Condition:''' (1) Selena is defeated; (2) Ally battleship is defeated, Selena is defeated; (3) Ally battleship is defeated '''Skill Point:''' Bemidoban and Shin RyuOuKi shot down. Both flee when below (8000 (E) / 10000 (N) / 12000 (H)) HP. '''Secret Requirements:''' '''Unit Acquisition:'''
*Mazinger Z, Great Mazinger and Getter Dragon gain the "F Dynamic Special" combination attack
*Alterion (CF) (Ibis, Tsugumi)
*AS Soleares (Selena, Elma) is unavailable during the intermission

|-
| class="fc-route1" |'''第３５話：闘志、誰がために Scenario 35 - For Whom the Fighting Spirit Burns'''
| class="fc-route2" |'''第３５話：魂、久遠に Scenario 35 - The Soul, Into Eternity'''
| class="fc-route3" |'''第３５話：THE GUN OF DIS Scenario 35 - THE GUN OF DIS'''
| class="fc-route4" |'''第３５話：クロージング・ハート Scenario 35 - Closing Heart'''

|-
|'''Victory Condition:''' (1)(2) Defeat all enemies '''Defeat Condition:''' (1) Touma is defeated; (2) Ally battleship is defeated, Touma, Sanger, or Rastel are defeated '''Skill Point:''' Defeat all enemies within 4 turns of allied reinforcements arriving. '''Secret Requirements:''' '''Unit Acquisition:'''
*DaiRaioh(Touma)
*Dygenguar (Sanger)
*Aussenseiter (Ratsel)

|'''Victory Condition:''' (1)(2)(3) Shin RyuOhKi is defeated '''Defeat Condition:''' (1) Kusuha or Bullet are defeated; (2) Kusuha is defeated; (3) Ally battleship is defeated, Kusuha is defeated '''Skill Point:''' Destroy Shin RyuOhKi within 6 turns of Varuch Ben and Ishar's arrival, destroying them first. '''Secret Requirements:''' '''Unit Acquisition:'''
*GouRyu Kai (Kusuha)
*Raiko Kai (Bullet)
*Shin RyuKoOh (Kusuha, Bullet)
*Dygenguar (Sanger)
*Aussenseiter (Ratsel)

|'''Victory Condition:''' (1)(2) Bemidoban or Shmuel are defeated; (3) ??? is defeated; (4) Valk Baal is defeated '''Defeat Condition:''' (1) Cobray is defeated, (2)(3)(4) Ally battleship is defeated, Cobray is defeated '''Skill Point:''' Defeat the Bemidoban within 5 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Varuch Ben (Cobray)
*Dis Astranagant (Cobray)

|'''Victory Condition:''' (1)(2) Defeat all enemies '''Defeat Condition:''' (1) Selena is defeated; (2) Ally battleship is defeated '''Skill Point:''' Map cleared within 7 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Eslim (Selena)
*Alterion (CF) replaces Tsugumi with Slay as a Subpilot

|-
| colspan="4" class="fc-std-sc" |'''第３６話：激突！勇者VS勇者！ Scenario 36 - Clash! Brave vs. Brave!'''

|-
| colspan="4" |'''Victory Condition:'''
*1st Part: Defeat all enemies
*2nd Part: Ally battleship is defeated
'''Defeat Condition:'''
*1st Part: Star GaoGaiGar is defeated
*2nd Part: Gai is defeated
'''Skill Point:''' Defeat all enemies within 6 turns. '''Secret Requirements:'''
*EVA-01 F-Type Equipment
**Shinji must defeat Ramiel on the first part of this scenario.
*Early Nu Gundam HWS
**Amuro must have 60 or more kills by the end of the scenario.
*GP-02A
**Burning, Monsha, Bate, and Adel must have a combined killcount of 100 or more by the end of the scenario.
*Nuclear Bazooka
**Meet the requirements for GP-02A
*Black Getter
**Michiru must have 20 kills or more by the end of the scenario.
'''Unit Acquisition:'''
*Gundam GP02
*Megarider
*Re-GZ BWS
*MP Nu Gundam
*Black Getter
*VF-1S S Valkyrie (Fokker)
*VF-1S S Valkyrie (Hikaru)
*VF-1A S Valkyrie (Kakizaki)
*VF-1J S Valkyrie
*YF-19 (Isamu)
*YF-21 (Guld)
*Battle 7 (Max)
*VF-19 Kai Fire Valkyrie (Basara)
*VF-11 MAXL Kai (Mylene)
*VF-17 Kai Nightmare (Ray)
*VF-17S Nightmare (Gamlin)
*VF-17D Nightmare (Physica)
*VF-17D Nightmare (Docker
*Soloship (Bess, Hatari)
*Ideon (Cosmo, Kasha, Moera)

|-
| colspan="4" class="fc-std-sc" |'''第３７話：果て無き旅路の始まり Scenario 37 - The Beginning of an Unending Journey'''

|-
| colspan="4" |'''Victory Condition:''' (1) Defeat all enemies; (2)(3) Devariim is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated; (3) Ally battleship is defeated, Bundle, Cutnall, or Kernagul are defeated
'''Skill Point:''' All enemies destroyed within 6 turns, with Devariim being last. '''Secret Requirements:''' '''Unit Acquisition:'''
*Heavy Weapons System parts for Nu Gundam
*Evangelion Unit 0 Custom gains the "N2 Mine" MAP attack
*Evangelion Unit 1 gains the "Magoroku E Sword" attack
*Gunbuster (Noriko)
*Sizzler Black (Jung)
*Eltrium (Tashiro, Deputy Chief)
*Bundle Ship (Bundle)
*Cutnall Ship (Cutnall)
*Kernagul Ship (Kernagul)

|- class="fc-route-h"
| colspan="2" |'''Go with the Soloship''' Gundam (0083, Zeta, ZZ, CCA, Wing, SEED) Getter Robo Raideen Daitarn 3 Evangelion Ideon GaoGaiGar
| colspan="2" |'''Go with the Battle 7''' Mazinger (Z, Great) Macross (DYRL, 7, Plus) Steel Jeeg Combattler V Voltes V Gunbuster Daimos Gaiking Goshogun Dancouga Virtual On

|-
| colspan="2" class="fc-route1" |'''第３８話：運命の炎の中で Scenario 38 - Within the Fires of Destiny'''
| colspan="2" class="fc-route3" |'''第３８話：戦火は星の瞬きと Scenario 38 - The Fires of War Among the Twinkling Stars'''

|-
| colspan="2" |'''Victory Condition:'''
*1st Part: Enemy Battleship is defeated
*2nd Part: (1) Defeat all enemies; (2) Dalam's Ship is defeated
'''Defeat Condition:'''
*1st Part: Ally battleship is defeated, Ideon is defeated
*2nd Part: (1) Ally battleship is defeated; (2) Ally battleship is defeated, Cosmo is defeated
'''Skill Point:''' Clear the map within 7 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Ideon loses Moera as a subpilot
*Ideon gains the "Ideon Gun" attack

| colspan="2" |'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Defeat all enemies within 6 turns. '''Secret Requirements:''' '''Unit Acquisition:'''

|-
| colspan="2" class="fc-route1" |'''第３９話：果てに待つもの Scenario 39 - What Awaits at the End'''
| colspan="2" class="fc-route3" |'''第３９話：ただ母星のために Scenario 39 - All for the Motherworld'''

|-
| colspan="2" |'''Victory Condition:''' (1)(2)Gabro Zan is defeated '''Defeat Condition:''' (1) Ally battleship is defeated, Ryouma, Hayato, Benkei, or Michiru are defeated; (2) Ally battleship is defeated, Ryouma, Hayato, Benkei, or Cosmo are defeated '''Skill Point:''' Destroy all Buff Clan ships within 8 turns, saving Gabro Zan for last. '''Secret Requirements:''' '''Unit Acquisition:'''
* Ideon gains Gije as a subpilot
* Shin Getter-1 gains the "Shin Shine Spark" attack

| colspan="2" |'''Victory Condition:''' Heinel is defeated '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' Within 7 turns, defeat all enemies, then defeat Heinel and Richter (Richter must be defeated before Heinel) '''Secret Requirements:''' '''Unit Acquisition:'''

*Goshogun gains the "GoFlasher Special" attack

|-
| colspan="2" class="fc-route1" |'''第４０話：勇者王、最後の刻！ Scenario 40 - The King of Brave’s Final Hour!'''
| colspan="2" class="fc-route3" |'''第４０話：勇気、果つる時… Scenario 40 - When Courage Fails...'''

|-
| colspan="2" |'''Victory Condition:'''
*1st Part: Defeat all enemies
*2nd Part: Ally battleship is defeated
'''Defeat Condition:'''
*1st Part: Defeat all enemies
*2nd Part: Gai is defeated
'''Skill Point:''' Defeat all enemies within 6 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*All GaoGaiGar units are lost

| colspan="2" |'''Victory Condition:''' (1)(2)(3) Defeat all enemies '''Defeat Condition:''' (1) Gai is defeated; (2) Ally battleship is defeated, Gai is defeated; (3) Ally battleship is defeated '''Skill Point:''' Defeat all enemies within 7 turns, with Palparepa Plus being the last one. '''Secret Requirements:''' '''Unit Acquisition:'''
*GaoFighGar (Gai)
*All GaoGaiGar units are lost

|-
| colspan="4" class="fc-std-sc" |'''第４１話：銀河が消滅する日 Scenario 41 - The Day the Galaxy is Extinguished'''

|-
| colspan="4" |'''Victory Condition:''' (1) Defeat all enemies; (2) GaoFighGar is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated, J is defeated '''Skill Point:''' GaoFighGar shot down by turn 7. '''Secret Requirements:'''
*Gije & Ganga Rube
**When given the option, choose to meet the opponent's challenge (first option).
'''Unit Acquisition:'''
*J-Ark (J)
|-
| colspan="4" class="fc-std-sc" |'''第４２話：超勇者黙示録 Scenario 42 - The Super Brave Apocalypse'''

|-
| colspan="4" |'''Victory Condition:'''
*1st Part: Defeat all enemies
*2nd Part: Genesis GaoGaiGar reaches the designated point in 4 turns
'''Defeat Condition:'''
*1st Part: Gai or J are defeated
*2nd Part: Ally battleship is defeated, Gai is defeated, 5th turn is reached
'''Skill Point:''' All enemies shot down by turn 7. '''Secret Requirements:'''
* J-Phoenix & Renais (Sub Pilot)
**Have J defeat Pia Decem on the first part of the stage. Defeat Pia Decem again to gain the attack.
'''Unit Acquisition:'''
* King J-der gains the "J-Phoenix" attack, and gains Renais as a sub-pilot
**Koryuu and Anryuu lose the "Renais Support Attack" attacks
*Genesic GaoGaiGar (Gai)
*Goldymarg (Goldymarg)
*Big Volfogg (Volfogg)
*TenRyuJin (TenRyuJin)
*KoRyu (KoRyu)
*AnRyu (AnRyu)
*EnRyu (EnRyu)
*HyoRyu (HyoRyu)
*Mic Sounder XIII (Mic Sounder XIII)

|- class="fc-route-h"
|'''Touma Route'''
|'''Kusuha Route'''
|'''Cobray Route'''
|'''Selena Route'''

|-
| class="fc-route1" |'''第４３話：閉ざされた世界で Scenario 43 - In a Closed-Off World'''
| class="fc-route2" |'''第４３話：真の龍神 Scenario 43 - The True Dragon God'''
| class="fc-route3" |'''第４３話：人形たちの宴 Scenario 43 - The Doll’s Banquet'''
| class="fc-route4" |'''第４３話：サイレント・クライ Scenario 43 - Silent Cry'''

|-
|'''Victory Condition:'''
*1st Part: (1) Defeat all enemies; (2) Vaikran is defeated, Houle is defeated
*2nd Part: Baran is defeated
'''Defeat Condition:'''
*1st Part: (1) Ally battleship is defeated, Touma or Ryusei are defeated; (2) Ally battleship is defeated, Ryusei is defeated
*2nd Part: Touma is defeated
'''Skill Point:''' Defeat the Bemidoban within 5 turns. '''Secret Requirements:''' '''Unit Acquisition:'''

|'''Victory Condition:''' (1) Defeat Shin RyuOhKi; (2) Vaikran is defeated, Houle is defeated '''Defeat Condition:''' (1) Kusuha or Ryusei are defeated; (2) Ally battleship is defeated, Ryusei is defeated '''Skill Point:''' Defeat Shin RyuOhKi within 5 turns. '''Secret Requirements:''' '''Unit Acquisition:'''

|'''Victory Condition:'''
*1st Part: (1) Defeat all enemies; (2) Vaikran is defeated, Houle is defeated
*2nd Part: Valk Baal is defeated
'''Defeat Condition:'''
*1st Part: (1)(2) Ally battleship is defeated, Ryusei is defeated
*2nd Part: Cobray is defeated
'''Skill Point:''' Defeat the Bemidoban within 5 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Dis Astranagant (Cobray) is unavailable during the intermission

|'''Victory Condition:''' (1) Defeat all enemies; (2)(3) Vaikran is defeated, Houle is defeated'''Defeat Condition:''' (1)(2) Ally battleship is defeated, Selena, Ibis, or Ryusei are defeated (3) Ryusei is defeated'''Skill Point:''' Defeat the Bemidoban within 5 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*AS Alegrias (Selena, Elma?) Is unavailable until the next stage

|-
| class="fc-route1" |'''第４４話：闘志、未来のために Scenario 44 - Fighting Spirit, for the Future'''
| class="fc-route2" |'''第４４話：四神招魂、ここに Scenario 44 - The Four Gods Souls, Gather Here'''
| class="fc-route3" |'''第４４話：鋼の戦神 Scenario 44 - The Steel War God'''
| class="fc-route4" |'''第４４話：マイホーム・マイフレンズ Scenario 44 - My Home, My Friends'''

|-
|'''Victory Condition:'''
*1st Part: Vaikran is defeated
*2nd Part: (1)(2) Vaikran is defeated
'''Defeat Condition:'''
*1st Part: Ally battleship is defeated, Ryusei is defeated
*2nd Part: (1) Touma or Lyria are defeated; (2) Touma, Baran, or Lyria are defeated
'''Skill Point:''' Destroy the Vaikran within 5 turns. '''Secret Requirements:'''
*VF-19F Excaliburs
**Max must have a total of 60 or more kills by the end of the scenario, if you do not pick the Go to Varauta route.
*Gije & Ganga Rube
**You must pick the Go To Bozoan Route.
'''Unit Acquisition:'''
*Banpreios (Ryuusei, Rai, Mai)
*Dygenguar (Sanger)
*Aussenseiter (Ratsel)
*Shumel (Lyria)
*Bemidoban (Baran)

|'''Victory Condition:'''
*1st Part: Vaikran is defeated
*2nd Part: (1)(2) Vaikran is defeated
'''Defeat Condition:'''
*1st Part: Kusuha or Ryusei are defeated
*2nd Part: (1) Ally battleship is defeated, Kusuha is defeated; (2) Kusuha, Bullet, or Lyria are defeated
'''Skill Point:''' Destroy the Vaikran within 5 turns. '''Secret Requirements:'''
*VF-19F Excaliburs
**Max must have a total of 60 or more kills by the end of the scenario, if you do not pick the Go to Varauta route.
*Gije & Ganga Rube
**You must pick the Go To Bozoan Route.
'''Unit Acquisition:'''
*Banpreios (Ryuusei, Rai, Mai)
*Dygenguar (Sanger)
*Aussenseiter (Ratsel)
*Shumel (Lyria)
*Shin RyuKoOh can now transform into Shin KoRyuOh

|'''Victory Condition:'''
*1st Part: (1) Defeat all enemies; (2) Vaikran is defeated
*2nd Part: Defeat all enemies
'''Defeat Condition:'''
*1st Part: (1)(2) Ally battleship is defeated, Ryusei, Arad or Seola are defeated
*2nd Part: Ally battleship is defeated, Cobray or Lyria are defeated
'''Skill Point:''' Destroy the Vaikran within 3 turns of its arrival. '''Secret Requirements:'''
*VF-19F Excaliburs
**Max must have a total of 60 or more kills by the end of the scenario, if you do not pick the Go to Varauta route.
*Gije & Ganga Rube
**You must pick the Go To Bozoan Route.
'''Unit Acquisition:'''
*Dis Astranagant (Cobray)
*Banpreios (Ryuusei, Rai, Mai)
*Dygenguar (Sanger)
*Aussenseiter (Ratsel)
*Shumel (Lyria)

|'''Victory Condition:'''
*1st Part: (1) Valk Isher is defeated; (2) Vaikran is defeated
*2nd Part: (1)(2) Vaikran is defeated
'''Defeat Condition:'''
*1st Part: (1)(2) Ally battleship is defeated, Ryusei or Ibis are defeated
*2nd Part: (1) Ally battleship is defeated, Selena, Ibis, or Lyria are defeated; (2) Selena or Lyria are defeated
'''Skill Point:''' Destroy the Vaikran within 3 turns of its arrival. '''Secret Requirements:'''
*VF-19F Excaliburs
**Max must have a total of 60 or more kills by the end of the scenario, if you do not pick the Go to Varauta route.
*Gije & Ganga Rube
**You must pick the Go To Bozoan Route.
'''Unit Acquisition:'''
*Banpreios (Ryuusei, Rai, Mai)
*Dygenguar (Sanger)
*Aussenseiter (Ratsel)
*Shumel (Lyria)
*Alterion (CF) replaces Slay with Tsugumi as a subpilot
*Vegalion (Slay)
**Alterion (CF) and Vegalion can combine into Hyperion

|}
 

==Stages 45 - 48==
{| width="100%"
|- class="fc-route-h"
| colspan="2" |'''Go to Earth'''
| colspan="2" |'''Go to Space'''

|- class="fc-route-h"
| width="25%" |'''Search for Irui''' Mazinger (Z, Great) Getter Robo Kotetsu Jeeg Gaiking Dancouga
| width="25%" |'''Fight against ZAFT''' Gundam (0083, Z, ZZ, CCA) Gundam Wing Gundam SEED Evangelion
| width="25%" |'''Go to Varauta''' Macross (DYRL, 7, Plus) GoShogun Daitarn 3 Gunbuster
| width="25%" |'''Go to Boazan''' Ideon Combattler V Voltes V Daimos Raideen GaoGaiGar Virtual On

|-
| class="fc-route1" |'''第４５話：とらわれの心、叫ぶ時 Scenario 45 - When the Captive Heart Cries Out'''
| class="fc-route2" |'''第４５話：忍び寄る終焉 Scenario 45 - Creeping Death'''
| class="fc-route3" |'''第４５話：悪夢の突入作戦 Scenario 45 - Charging into a Nightmare'''
| class="fc-route4" |'''第４５話：もう一つの母星ボアザン Scenario 45 - Another Mother Planet - Boazan'''

|-
|'''Victory Condition:''' (1) Defeat all enemies: (2) Legion is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated '''Skill Point:''' Defeat all enemies within 7 turns '''Secret Requirements:'''
'''Unit Acquisition:'''

|'''Victory Condition:''' (1) Defeat all enemies; (2) All Angels are defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated, Shinji, Asuka, or Rei are defeated '''Skill Point:''' Defeat all enemies within 5 turns. '''Secret Requirements:'''
*Early Nu Gundam HWS
**If you did not receive it on Scenario 37, Amuro must have 60 or more kills by the end of the scenario.
*EVA-01 F-Type Equipment(optional)
**Shinji must defeat Armisael.
*Neue Ziel
**Kou must have 40 or more kills than Keith by the end of the scenario.
*Val Varo
**Keith must have 20 or more kills than Kou by the end of the scenario.
*Gerbera Tetra
**Kou and Keith's killcounts must be within 6 of one another by the end of the scenario.
*Quin Mantha
**The sum of Ple and Ple 2's killcounts must be a number ending in 5 at the end of the scenario.
*Haman's Qubeley
**The sum of Ple and Ple 2's killcounts must be a number ending in 0 at the end of the scenario.
*MP Qubeleys
**The sum of Ple and Ple 2's killcounts must be a number ending in 7 at the end of the scenario.
*Doven Wolf
**The sum of Beecha and Mondo's killcounts must be a number ending in 0 at the end of the scenario.
*Geymalk
**The sum of Beecha and Mondo's killcounts must be a number ending in 5 at the end of the scenario.
*Strike Rouge IWSP
**The sum of Cagalli, Julie, Mayura, and Asagi's killcounts must be 100 or more by the end of the scenario.
*Early Full Armor ZZ Gundam
**Judau, Mondo, Beecha, Elle, Roux, and Iino's combined killcounts must be greater than 115 by the end of this scenario.
'''Unit Acquisition:'''
*Neue Ziel OR Val Varo OR Gerbera Tetra
*Quin Mantha OR Haman's Qubeley OR Mass Production Qubeley (x2)
*Doven Wolf OR Geymalk
*Strike Rougue IWSP
*Heavy Weapon System for Nu Gundam
*Full Armor Parts for ZZ Gundam
*Evangelion Unit 2 gains the "A.T. Field" attack
*Evangelion Unit 0 Custom gains the "Lance of Longinus" attack

|'''Victory Condition:'''
*1st Part: All allies reach the designated point, aside Battle 7
*2nd Part: Any ally reaches the designated point
'''Defeat Condition:'''
*1st Part: Any ally is defeated
*2nd Part: Any ally is defeated
'''Skill Point:''' Defeat all enemies before moving a unit to the target area. '''Secret Requirements:'''
'''Unit Acquisition:'''
*The following all gain the "Large Anti-Ship Reaction Missile" attack
**VF-1S S Valkyrie (Focker), VF-1S S Valkyrie (Hikaru), VF-1A S Valkyrie (Kakizaki)
**VF-17S Nightmare (Gamlin), VF-17D Nightmare (Docker), VF-17D Nightmare (Physica)
**YF-19 (Isamu), YF-21 (Guld)

|'''Victory Condition:''' Zartan is defeated '''Defeat Condition:''' Any ally is defeated '''Skill Point:''' Destroy all other enemies before destroying Zaltan. '''Secret Requirements:'''
'''Unit Acquisition:'''
*Voltes V is unavailable during the intermission
*Daimos is unavailable during the intermission

|-
| class="fc-route1" |'''第４６話：さらば父よ、戦士達の旅立ち Scenario 46 - Farewell, Father! The Warriors Depart'''
| class="fc-route2" |'''第４６話：永遠を信じて Scenario 46 - Believe in Eternity'''
| class="fc-route3" |'''第４６話：野望の第４惑星 Scenario 46 - The Fourth Planet of Ambition'''
| class="fc-route4" |'''第４６話：崩れゆく邪悪の塔 Scenario 46 - The Collapsing Tower of Evil'''

|-
|'''Victory Condition:''' (1) Steel Jeeg persuades Flora; (2) Defeat Yamata no Orochi, Demonica, and the Dragon Ship; (3) '''Defeat Condition:''' (1) Flora is defeated, Ally battleship is defeated, Kouji, Tetsuya, or Steel Jeeg are defeated; (2) Yamata no Orochi reaches the designated point, Ally battleship is defeated, Kouji, Tetsuya or Steel Jeeg are defeated '''Skill Point:''' Destroy Ryuuma and the Grand Marshall of Hell within 8 turns. '''Secret Requirements:'''
*Minmei's Disc
**Move Boss's squad onto either 'Hut' tile on the beach, and you will pick up the item
'''Unit Acquisition:'''
*Mazinkaizer gains the "Kaizer Nova" attack and Flight (S Rank in Air)

|'''Victory Condition:''' (1)(2) Defeat all enemies; (3) The Dominion withdraws '''Defeat Condition:''' (1) Any ally is defeated; (2)(3) Ally battleship is defeated, Kira or Athrun are defeated '''Skill Point:''' Destroy the Dominion (retreats at (10000HP (E) / 15000HP (N)/20000HP (H)) '''Secret Requirements:''' '''Unit Acquisition:'''
*Eternal (Lacus, Andrew)
*BuCUE
*METEOR parts for Freedom Gundam
*METEOR parts for Justice Gundam
*LaGOWE

|'''Victory Condition:''' (1) Guide all enemies east past the designated line; (2) All allies reach the escape point '''Defeat Condition:''' (1) Any ally is defeated, Any enemy is defeated; (2) Any ally is defeated '''Skill Point:''' Clear the map by defeating all enemies within 8 turns of the victory condition change '''Secret Requirements:'''
*VF-19F Excaliburs
**Max must get 15 or more kills on this scenario.
'''Unit Acquisition:'''
*VF-22S Sturmvogel II (Max)
*FBz-99G Zaubergeran (Gamlin)
*VF-19 Kai Fire Valkyrie gains the song "TRY AGAIN"
**VF-19 Kai Fire Valkyrie, VF-11 MAXL Kai, and VF-17 Kai Nightmare gain the "TRY AGAIN" (MAP) and (ALL) combination attack

|'''Victory Condition:''' (1) None; (2) Warchimedes is defeated; (3) Janera is defeated '''Defeat Condition:''' (1) Any friendly unit is defeated, Voltes V or Daimos are defeated; (2)(3) Ally battleship is defeated, Hyouma, Ken'ichi, Kazuya, or Heinel are defeated '''Skill Point:''' Destroy all enemies and finish the stage within 10 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Combattler V, Voltes V, and Daimos gain the "Choudenji SeiKenZuki" combination attack

|-
| class="fc-route1" |'''第４７話：神になろうとした男 Scenario 47 - The Man Who Tried to Become a God'''
| class="fc-route2" |'''第４７話：ヒトの見た夢 Scenario 47 - The Dream People Saw'''
| class="fc-route3" |'''第４７話：大宇宙の意志 Scenario 47 - The Will of the Universe'''
| class="fc-route4" |'''第４７話：因果の海で Scenario 47 - In the Sea of Causality'''

|-
|'''Victory Condition:''' (1) Defeat all enemies; (2) Shapiro is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated '''Skill Point:''' Destroy Shapiro within 6 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*Gaiking and Daiku Maryuu gain the "Giant Cutter Upside-down Slash" combination attack

|'''Victory Condition:''' (1)(2)(3) Defeat all enemies; '''Defeat Condition:''' (1) Ally battleship is defeated, Kira, Mwu, or Dearka are defeated; (2) Kira is defeated; (3) The Vesalius is defeated '''Skill Point:''' Orga, Clotho and Shani shot down before Fllay reaches the Dominion. '''Secret Requirements:''' '''Unit Acquisition:'''

|'''Victory Condition:''' (1)(2)(3) Defeat all enemies '''Defeat Condition:''' (1) Any ally is defeated; (2) Ally battleship is defeated, Bundle is defeated; (3) Ally battleship is defeated, Bundle, Gamlin, or Mylene are defeated '''Skill Point:''' Destroy all SMTC units within 5 turns. '''Secret Requirements:''' '''Unit Acquisition:'''
*VF-19S Excalibur (before deployment)
*VF-19F Excalibur (x2) (before deployment)
*Bundle's Ship (Bundle, Cutnal, Kernagul)

|'''Victory Condition:'''
*1st and 2nd Part: Defeat all enemies within (5 (E) / 4 (N) / 3 (H)) turns
*3rd and 4th Part: Defeat all enemies within (4 (E) / 3 (N) / 2 (H)) turns
*5th Part: Defeat all enemies within (8 (E) / 7 (N) / 6 (H)) turns
'''Defeat Condition:'''
*1st and 2nd Part: Ally battleship is defeated, Turn (6 (E) / 5 (N) / 4 (H)) is reached
*3rd and 4th Part: Ally battleship is defeated, Turn (5 (E) / 4 (N) / 3 (H)) is reached
*5th Part: Ally battleship is defeated, Turn (9 (E) / 8 (N) / 7 (H)) is reached
'''Skill Point:''' During the 5th Part: Shoot down the two Gataman Zans before the Gabro Zan '''Secret Requirements:''' '''Unit Acquisition:'''

|-
| colspan="2" class="fc-route1" |'''第４８話：失われた者たちへの鎮魂歌 Scenario 48 - Requiem for the Lost'''
| colspan="2" class="fc-route4" |'''第４８話：銀河に死す Scenario 48 - To Die in the Galaxy'''

|-
| colspan="2" |'''Victory Condition:''' (1) Deathgaia, Gildrome, and Helmut are defeated; (2) Mute Zalbados is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated '''Skill Point:''' Defeat all enemies within 6 turns after Muge Zalbados appears, then defeat Muge Zalbados '''Secret Requirements:'''
*Early Nu Gundam HWS
**If you did not receive it on Scenario 37 or 45, Amuro must have 60 or more kills by the end of the scenario.
'''Unit Acquisition:'''

| colspan="2" |'''Victory Condition:''' (1) Defeat all enemies; (2) Gollum or Zomd are defeated; (3) Defeat all enemies; (4) Gabro Zan is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated, Basara is defeated; (3)(4) Ally battleship is defeated, Ideon is defeated '''Skill Point:''' Destroy GaviGla (retreats at 8000HP (E) / 10000HP (N) / 12000HP (H)) '''Secret Requirements:'''
*Early Nu Gundam HWS
**If you did not receive it on Scenario 37 or 45, Amuro must have 60 or more kills by the end of the scenario.
*Gije & Ganga Rube
**The Ide Gauge must reach level 5 during this scenario.
'''Unit Acquisition:'''
*Ideon replaces Gije with Dek as a Subpilot
*Battle 7 gains the "Large Anti-Ship Reaction Missile" attack
*VF-19 Kai Fire Valkyrie (Basara) is unavailable during the intermission

|}
 

==Stages 49 - 58==
{| width="100%"
|-
| colspan="3" class="fc-std-sc" |'''第４９話：銀河に響く歌声 Scenario 49 - Songs Resounding Through the Galaxy'''

|-
| colspan="3" |'''Victory Condition:'''
*1st Part: Defeat all enemies, In 5 turns Battle 7 reaches the designated point
*2nd Part: (1) In 6 turns, Battle 7 reaches the designated point; (2)(3)(4) Gepelnitch is defeated
'''Defeat Condition:'''
*1st Part: Ally battleship is defeated, Battle 7 doesn't reach the designated point by turn 6
*2nd Part: (1) Ally battleship is defeated, Mylene or Ray are defeated, Battle 7 doesn't reach the designated point by turn 7; (2) Ally battleship is defeated, Ray is defeated; (3) Ally battleship is defeated, Basara, Mylene, or Ray are defeated; (4) Ally battleship is defeated, Basara, Mylene, Ray, or Sybil are defeated
'''Skill Point:''' GaviGla is defeated (in the 1st part) '''Secret Requirements:'''
*Gavil and FBz-99G Zaubergeran
**If Gamlin has over 50 kills, Gamlin must defeat GaviGla during the first half of the scenario. During the second half of the scenario, do not defeat Gavil.
'''Unit Acquisition:'''
*VF-22S Sturmvogel II (Max)
*VF-22S Sturmvogel II (Milia)
*Sybil (Sybil)
**VF-19 Kai Fire Valkyrie, VF-11 MAXL Kai, and VF-17 Kai Nightmare, and Sybil gain the "TRY AGAIN" combination attack
*FBz-99G Zaubergeran (Gavil)

|-
| colspan="3" class="fc-std-sc" |'''第５０話：二つの門と二つの星 Scenario 50 - Two Gates, Two Stars'''

|-
| colspan="3" |'''Victory Condition:''' (1) Hermodr Echad is defeated; (2) Zfield is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated '''Skill Point:''' Destroy the Hermodr Echad within 5 turns. '''Secret Requirements:'''
*Duel Gundam & Yzak
**Dearka's killcount must be 50 or more by the end of the scenario.
'''Unit Acquisition:'''

|-
| colspan="3" class="fc-std-sc" |'''第５１話：終わらない明日へ Scenario 51 - To an Unending Tomorrow'''

|-
| colspan="3" |'''Victory Condition:'''
*1st Part: (1) Destroy all nuclear missiles; (2) Dominion is defeated & Athrun reaches the designated point
*2nd Part: Destroy the Genesis reactor within 4 turns
'''Defeat Condition:'''
*1st Part: (1) Any missile reaches the end of the map, Ally battleship is defeated, Kira, Athrun or Cagalli are defeated; (2) Ally battleship is defeated, Kira, Athrun or Cagalli are defeated
*2nd Part: Kira is defeated, reach the 5th turn
'''Skill Point:''' Destroy the Providence Gundam (in the 2nd part) '''Secret Requirements:'''
*Duel Gundam & Yzak
**During the first half of the scenario, destroy all of the nukes, then have Dearka battle with Yzak
**Both must survive the first half of the scenario
'''Unit Acquisition:'''
*Lacus unlocks the SEED pilot skill
*Duel Gundam (Yzak)

|-
| colspan="3" class="fc-std-sc" |'''第５２話：世界の中心でアイを叫んだもの Scenario 52 - The One Who Cried "Love" at the Heart of the World'''

|-
| colspan="3" |'''Victory Condition:'''
*1st Part: (1)(2)(3) Defeat all enemies (4)(5) EVA Unit 1 is defeated
*2nd Part: EVA Unit 1 is defeated
'''Defeat Condition:'''
*1st Part: (1) Any ally is defeated; (2) Shinji is defeated; (3)(4) Ally battleship is defeated; (5) Ally battleship is defeated, Reach the 6th turn after the "Cross" grows from the Earth
*2nd Part: Shinji is defeated
'''Skill Point:''' Asuka survives for 2 full turns. '''Secret Requirements:'''
*Neue Ziel
**Kou must have 40 or more kills than Keith by the end of the scenario.
*Val Varo
**Keith must have 20 or more kills than Kou by the end of the scenario.
*Gerbera Tetra
**Kou and Keith's killcounts must be within 6 of one another by the end of the scenario.
*Quin Mantha
**The sum of Ple and Ple 2's killcounts must be a number ending in 5 at the end of the scenario.
*Haman's Qubeley
**The sum of Ple and Ple 2's killcounts must be a number ending in 0 at the end of the scenario.
*MP Qubeleys
**The sum of Ple and Ple 2's killcounts must be a number ending in 7 at the end of the scenario.
*Doven Wolf
**The sum of Beecha and Mondo's killcounts must be a number ending in 0 at the end of the scenario.
*Geymalk
**The sum of Beecha and Mondo's killcounts must be a number ending in 5 at the end of the scenario.
*EVA-01 F-Type Equipment
**Shinji must defeat Zeruel on the first part of this scenario.
**Shinji must defeat EVA-01 on the second part of this scenario.
**The sum of Shinji, Asuka, and Rei's killcounts must be 250 or more, or 150 or more if you met the requirement on scenario 45.
*Hi-Nu Gundam
**Amuro and Bright's combined killcounts must be greater than 120 by the end of this scenario.
*Sazabi
**Amuro and Kamille's killcount must be 50 or more each at the end of this scenario. You will receive it at the start of next scenario.
*Strike Rouge IWSP
**If you did not receive it on Scenario 45, the sum of Cagalli, Julie, Mayura, and Asagi's killcounts must be 100 or more by the end of the scenario.
*Destroid Monster
**If you did not receive it on Scenario 31, the sum of Fokker, Hikaru, and Kakizaki's killcounts must be 100 or more by the end of this scenario.
'''Unit Acquisition:'''
*Evangelion Unit 0 (Kaowru)
*Evangelion Unit 0 loses the "Lance of Longinus" attack

|-
| colspan="3" class="fc-prologue" |'''Beyond this point, losing Ideon results in a Game Over'''
|-
| colspan="3" class="fc-std-sc" |'''第５３話：出航！銀河殴り込み艦隊！ Scenario 53 - The Galactic Assault Fleet Takes Sail!'''

|-
| colspan="3" |'''Victory Condition:''' Defeat all enemies '''Defeat Condition:''' Ally battleship is defeated '''Skill Point:''' 230 enemy units shot down by turn 7. '''Secret Requirements:''' '''Unit Acquisition:'''
*All secret units and parts are given after the stage begins <ul><li>Neue Ziel OR Val Varo OR Gerbera Tetra</li><li>Quin Mantha OR Haman's Qubeley OR Mass Production Qubeley (x2)</li><li>Doven Wolf OR Geymalk</li><li>Strike Rougue IWSP</li><li>Hi-Nu Gundam</li><li>Sazabi</li><li>Destroid Monster</li><li>F-Type Equipment for Evangelion Unit 1</li><li>Atomic Bazooka parts for GP-02</li><li>Heavy Weapon System for Nu Gundam</li><li>Full Armor Parts for ZZ Gundam</li></ul>
*MP Nu Gundam
**Fin Funnel parts for MP Nu Gundam
*Gunbuster adds Kazumi as a Subpilot
**Gunbuster gains the "Super Inazuma Kick" attack
*Ra Cailum gains the "Nuclear Missile" MAP and ALL attacks

|-
| colspan="3" class="fc-std-sc" |'''第５４話：神に守られし星 Scenario 54 - The Planet Guarded by the Gods'''

|-
| colspan="3" |'''Victory Condition:'''
*1st Part: (1) Defeat all enemies; (2) The SRX Team rescues [https://akurasu.net/wiki/Super_Robot_Wars/Alpha_3/Info_Dump#Finding_Aya_on_Scenario_54 Aya]; (3) Jumora is defeated
*2nd Part: Bemidoban is defeated
'''Defeat Condition:'''
*1st Part: (1)(2) Ally battleship is defeated, Ryusei or Viletta are defeated; (3) Ally battleship is defeated, Ryusei, Viletta, Baran, or Lyria are defeated
*2nd Part: Sanger is defeated
**2nd Part (Touma Route): Touma is defeated
'''Skill Point:''' Clear the map within 10 turns, with both Hermoz defeated '''Secret Requirements:''' '''Unit Acquisition:'''
*Banpreios adds Aya as a Subpilot
**Branpreios gains the "Tenjou Tenge Nendou Musou-ken" attack
**Branpreios and R-GUN Powered gain the "Tenjou Tenge Ichigeki Hissatsu-ho" combination attack
*Shumel (Lyria)
*Bemidoban (Baran)

|-
| colspan="3" class="fc-std-sc" |'''第５５話：まつろわぬ神 Scenario 55 - The God Who Resists Order'''

|-
| colspan="3" |'''Victory Condition:'''
*1st Part: (1) Defeat all enemies; (2) Defeat Gebel GanEden
*2nd Part: (1) Defeat all enemies; (2) Defeat Gebel GanEden
'''Defeat Condition:'''
*1st Part: (1)(2) Ally battleship is defeated
*2nd Part: (1)(2) Ally battleship is defeated
'''Skill Point:''' Within 6 turns, defeat both Zfiruds '''Secret Requirements:''' '''Unit Acquisition:'''

|-
| colspan="3" class="fc-std-sc" |'''第５６話：終わりなき総力戦 Scenario 56 - Unending Total War'''

|-
| colspan="3" |'''Victory Condition:'''
*1st Part: Drowa Zan is defeated within 5 turns
*2nd Part: (1) Soloship move next to the Bairal Jinn; (2) Any unit reaches the designated point
'''Defeat Condition:'''
*1st Part: Ally battleship is defeated, 6th turn is reached
*2nd Part: (1)(2) Ally battleship is defeated
'''Skill Point:''' Clear the map within 7 turns. '''Secret Requirements:'''
*Gije & Ganga Rube
**You must pick the Fight The Buff Clan option at the end of the scenario.
*Bad Ending Route
**On New Game+, choose to fight (first option)
'''Unit Acquisition:'''

|- class="fc-route-h"
| width="40%" |'''Fight The Buff Clan''' Ideon, Getter Robo Combattler V, Voltes V, Daimos Daitarn 3 Gundam (0083, Zeta, ZZ, CCA, Wing, SEED)
| width="40%" |'''Fight The STMC''' Mazinger (Z, Great), Steel Jeeg, Raiden Goshogun, Dancouga, Gaiking Macross (DYRL, Plus, 7) Gunbuster, Evangelion, GaoGaiGar Virtual On
| width="20%" |'''Bad Ending '''

|-
| class="fc-route1" |'''第５７話：憎しみの環の中で Scenario 57 - In a Circle of Hatred'''
| class="fc-route3" |'''第５７話：終わりの始まり Scenario 57 - The Beginning of the End'''
| class="fc-prologue" |'''イデ発動ルート最終話：銀河に君と''' '''Ide Activation Final Scenario - With You In The Galaxy'''

|-
|'''Victory Condition:'''
*1st Part: (1) Defeat all enemies; (2) Soloship reaches the designated point
*2nd Part: Defeat all enemies within (11 (E) / 9 (N) / 7 (H)) turns
'''Defeat Condition:'''
*1st Part: (1)(2) All allies are defeated
*2nd Part: Turn (12 (E) / 10 (N) / 8 (H)) is reached, Ally battleship is defeated
'''Skill Point:''' Defeat all enemies within (10 (E) / 8 (N) / 6 (H)) turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Ganga Rube (Gije)

|'''Victory Condition:''' (1)(2) Defeat all enemies '''Defeat Condition:''' (1) Eltrium is defeated; (2) Ally battleship is defeated '''Skill Point:''' Defeat all enemies within 7 turns '''Secret Requirements:''' '''Unit Acquisition:'''
*Eltrium (Tashiro, Deputy Chief)

| rowspan="4" |'''Victory Condition:''' Bairal Jinn is defeated '''Defeat Condition:''' Ally battleship is defeated '''Secret Requirements:''' '''Unit Acquisition:'''

|-
| class="fc-route1" |'''第５８話：発動 Scenario 58 - Activation'''
| class="fc-route3" |'''第５８話：死闘、未来を懸けて Scenario 58 - The Mortal Struggle for the Future'''

|-
|'''Victory Condition:'''
*1st Part: Bairal Jinn is defeated
*2nd Part: Bairal Jinn is defeated
'''Defeat Condition:'''
*1st Part: Ally battleship is defeated
*2nd Part: Ally battleship is defeated
'''Skill Point:''' Destroy the Bairal Jinn within six turns. '''Secret Requirements:''' '''Unit Acquisition:'''

|'''Victory Condition:''' (1)(2) Defeat all enemies '''Defeat Condition:''' (1) Ally battleship is defeated; Drowa Zan is defeated, Ally battleship is defeated(2) '''Skill Point:''' All Buff Clan units survive the stage. '''Secret Requirements:''' '''Unit Acquisition:'''

|}
 

==Stages 59 - END==
{| width="100%"
|-
| colspan="2" class="fc-std-sc" |'''第５９話：果てしなき流れの果てに Scenario 59 - At the End of the Unending Flow'''

|-
| colspan="2" |'''Victory Condition:'''
*1st Part: Reach the 11th turn
*2nd Part: Defeat all enemies, 6th turn is reached
'''Defeat Condition:'''
*1st Part: Ally battleship is defeated, Any enemy enters the designated area
*2nd Part: Any enemy enters the designated area, Ally battleship is defeated, Noriko or Jung are defeated
'''Skill Point:''' Defeat all enemies within 5 turns. '''Secret Requirements:''' '''Unit Acquisition:'''

|- class="fc-route-h"
| width="50%" |'''Normal Ending - 56 Skill Points or less, OR turn count 421 or more'''
| width="50%" |'''Good Ending - 57 Skill Points or more AND turn count 420 or less'''

|-
| class="fc-route1" |'''最終話: 終焉の銀河 Final Scenario - A Galaxy of Death'''
| class="fc-route3" |'''最終話: 今遥か遠い彼方… Final Scenario - Now, The Faraway Yonder'''

|-
|'''Victory Condition:''' (1) ??? is destroyed; (2) Kaiser Ephres is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated '''Secret Requirements:''' '''Unit Acquisition:'''

|'''Victory Condition:''' (1) ??? is destroyed; (2)(3) Kaiser Ephres is defeated '''Defeat Condition:''' (1)(2) Ally battleship is defeated; (3) Irui is defeated '''Secret Requirements:''' '''Unit Acquisition:'''
*Nashim Gan Eden (Irui)

|}